Citrus Sinensis ID: 042831

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-----
Protein Sequence
MAICNTCSSNSPLLLSFFTITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLEMDDETTNPVSNPKRRRKNRTALVVGLSLGGGVLVGGVVLIIWLAGIGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTYLSPP
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccEEEcccccccccEEEcccccccEEEEEEccccccccccccccccEEEEEEEEEEccccccccccEEEEEccccccccccccccccccccccccccccccEEEEEEEcccccccccccEEEEEcccccccccccccccccccccEEEEEEEcccccEEEEEEEEccccccccccEEEEcccccccccccEEEEEEccccccEEEEEEEccccccccccccccccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHccccccEEcHHHHHHHHcccccccccccccccEEEEEEEcccccEEEEEEcccccHHHHHHHHHHHHHHHcccccccccEEEEEccccEEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEEccccccccccccccccccccccccEEccccccccccEEEcccccccHHccccccccccccccccHHEEEEHHccccccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEcccccccccEEEEEccEEEccEEEEEccccccEEEEEEcccEEcEccccccEcEEEEEEEEEEEcccccccccEEEEEEEEccccccccHHHcccccccccccccccEccEEEEEEcccccccccccEEEEEEEEccccEEEEccccccccccEEEEEEEccccEEEEEEEcccccccccccEEEEEccHHHHcccEEEEEEEEEccccccEEEEEEEEEEEEEccccccccccccccccccccccHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccccccEEEEcEccccccEEEEEEEccccHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccEEEccccccEEcccccEEcccccccccccccHHHHHHcEEcHHHHHHHHHHHHHHHHccccccccccccccEEEHHHHHHHHccccHHHHccHHHcccccHHHHHHHHHHHcccccccccccccHHHHHHHHcccccccccccccccccccccc
Coil and Loop (DISEMBL)
maicntcssnsplllSFFTITISFCLTIIPLasaltfnytsfspqyddnityeraypdsnrviqlpanretagratyNQSMRLWDkatgnltdfttHFSFVidsrnssyyadglafflapqgskiptnkgggsfgltkdneplnssipfvAVEFDVyvnswdptfshvgidinsvkskknvswwsdvksgrrnEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLpefvtfgfsmatgvDFAIFSIYSWefnsslemddettnpvsnpkrrrknRTALVVGLSLGGGVLVGGVVLIIWLAGigrkrkegdeednqgfseyiddefergagpkrfpykelalatndfnddqklgqggfggvykgFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEfmpngsldshlfkensLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHrdikssnimldsnfnakigDFGLARLVEHakgsqttvlagtmgymapecattgkaskesdvySFGIVALEIAcgrkpinpkapqgqVSLLQWVWDLygngklleavdprlcrdfdgQQIERLMIVGLWcahpdenlrpSIRQVIHVLnfeaplpalppkmpvptylspp
Flexible Loop (DISEMBL)
maicntcssnspLLLSFFTITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFShvgidinsvkskknvswwsdvksgrrnEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFnsslemddettnpvsnpkrrrknrTALVVGlslgggvlvGGVVLIIWLAGigrkrkegdeednqgfseyiddefergaGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVkrvsqgskqgIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEaplpalppkmpvptylspp
Low Complexity Region (SEG)
MAICNTCSSNSPLLLSFFTITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDInsvkskknvswwsdvksGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLEMDDETTNPVSNPKRRRKNRTAlvvglslgggvlvggvvliiwlagigRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLgqggfggvykgffRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEaplpalppKMPVPTYLSPP
Disordered region (IsUnstruct)
***CNTCSSNSPLLLSFFTITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQ**********************NSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFN***********************TALVVGLSLGGGVLVGGVVLIIWLAGIG******************************FPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPL****************
Disordered Region (DISOPRED)
***********PLLLSFFTITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWD******TDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSS***********SNPKRRRKNRTALVVGLSLGGGVLVGGVVLIIWLAGIGRKRKE***********YIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQ******KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTYLSPP
Disordered Region (DISEMBL)
********SNSPLLLSFFTITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE****************KNRTALVVGLSLGGGVLVGGVVLIIWLAGIGR**********QGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTYLSPP
Disordered Region (DISPRO)
********SNSPLLLSFFTITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLEMDDETTNPVSNPKRRRKNRTALVVGLSLGGGVLVGGVVLIIWLAGIGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTYL***
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAICNTCSSNSPLLLSFFTITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLEMDDETTNPVSNPKRRRKNRTALVVGLSLGGGVLVGGVVLIIWLAGIGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTYLSPP
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	645	2.2.26 [Sep-21-2011]
Q9LXA5	651	L-type lectin-domain cont	yes	no	0.944	0.935	0.479	1e-161
Q9LSL5	675	L-type lectin-domain cont	no	no	0.920	0.88	0.462	1e-144
Q9FHG4	681	Probable L-type lectin-do	no	no	0.950	0.900	0.378	1e-114
Q9M2S4	684	L-type lectin-domain cont	no	no	0.852	0.804	0.386	1e-103
Q9M345	677	L-type lectin-domain cont	no	no	0.927	0.883	0.361	1e-103
Q9LYX1	711	L-type lectin-domain cont	no	no	0.858	0.779	0.374	1e-101
O04534	666	Putative L-type lectin-do	no	no	0.866	0.839	0.375	1e-101
O81292	674	L-type lectin-domain cont	no	no	0.913	0.873	0.356	3e-98
Q9SZD5	669	L-type lectin-domain cont	no	no	0.866	0.835	0.376	7e-98
O80939	675	L-type lectin-domain cont	no	no	0.852	0.814	0.369	2e-97

>sp|Q9LXA5|LRK91_ARATH L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1

 Score =  567 bits (1461), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 311/648 (47%), Positives = 418/648 (64%), Gaps = 39/648 (6%)

Query: 9   SNSPLLLSFFTITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPAN 68
           +NS LL SF        + ++P   ++ FN + F     + I Y+     +N  ++L   
Sbjct: 2   ANSILLFSF--------VLVLPFVCSVQFNISRFGSDVSE-IAYQ-GDARANGAVELTNI 51

Query: 69  RET--AGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSY--YADGLAFFLAPQGSK 124
             T  AG ATY + + LW+  T   +DF+T FSF ID+RN  Y  Y  G AFFLAP   +
Sbjct: 52  DYTCRAGWATYGKQVPLWNPGTSKPSDFSTRFSFRIDTRNVGYGNYGHGFAFFLAPARIQ 111

Query: 125 IPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVN-SWDP--TFSHVGIDINSVKSKKNV 181
           +P N  GG  GL       +S+ P V VEFD + N  WDP    SHVGI+ NS+ S    
Sbjct: 112 LPPNSAGGFLGLFNGTNNQSSAFPLVYVEFDTFTNPEWDPLDVKSHVGINNNSLVSSNYT 171

Query: 182 SWWSDVKSGRRNEAWISYNSSTHNLSVAFT-GFRNNLVVMQGLDYQVDLRQHLPEFVTFG 240
           SW +   +       I Y+S+  NLSV++T    ++ +    L Y +DL + LP  VT G
Sbjct: 172 SWNATSHNQDIGRVLIFYDSARRNLSVSWTYDLTSDPLENSSLSYIIDLSKVLPSEVTIG 231

Query: 241 FSMATGVDFAIFSIYSWEFNSSLEMDDETTNPVSNPKRRRKNRTALVVGLSLGGGVLVGG 300
           FS  +G       + SWEF+SSLE+ D         K+ + ++  +++G+S+ G VL+  
Sbjct: 232 FSATSGGVTEGNRLLSWEFSSSLELID--------IKKSQNDKKGMIIGISVSGFVLLTF 283

Query: 301 VV--LIIWLAGIGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQ 358
            +  LI++L    RK+++   E+ +  +  I+++ ERGAGP++F YK+LA A N+F DD+
Sbjct: 284 FITSLIVFLK---RKQQKKKAEETENLTS-INEDLERGAGPRKFTYKDLASAANNFADDR 339

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWC 418
           KLG+GGFG VY+G+    +  +A+K+ + GSKQG +E+ +EVKIIS LRHRNLVQL+GWC
Sbjct: 340 KLGEGGFGAVYRGYLNSLDMMVAIKKFAGGSKQGKREFVTEVKIISSLRHRNLVQLIGWC 399

Query: 419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
           HEK E L++YEFMPNGSLD+HLF +   L W  R KI   LAS LLYL EEWEQCVVHRD
Sbjct: 400 HEKDEFLMIYEFMPNGSLDAHLFGKKPHLAWHVRCKITLGLASALLYLHEEWEQCVVHRD 459

Query: 479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVY 538
           IK+SN+MLDSNFNAK+GDFGLARL++H  G QTT LAGT GYMAPE  +TG+ASKESDVY
Sbjct: 460 IKASNVMLDSNFNAKLGDFGLARLMDHELGPQTTGLAGTFGYMAPEYISTGRASKESDVY 519

Query: 539 SFGIVALEIACGRKPINPKAPQGQV----SLLQWVWDLYGNGKLLEAVDPRL-CRDFDGQ 593
           SFG+V LEI  GRK ++ +  QG+V    +L++ +WDLYG G+++ A+D +L    FD +
Sbjct: 520 SFGVVTLEIVTGRKSVDRR--QGRVEPVTNLVEKMWDLYGKGEVITAIDEKLRIGGFDEK 577

Query: 594 QIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTY 641
           Q E LMIVGLWCAHPD N RPSI+Q I VLN EAP+P LP KMPV TY
Sbjct: 578 QAECLMIVGLWCAHPDVNTRPSIKQAIQVLNLEAPVPHLPTKMPVATY 625

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9LSL5|LRK92_ARATH L-type lectin-domain containing receptor kinase IX.2 OS=Arabidopsis thaliana GN=LECRK92 PE=2 SV=1

 Score =  513 bits (1320), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 292/632 (46%), Positives = 386/632 (61%), Gaps = 38/632 (6%)

Query: 31  LASALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPANRETA--GRATYNQSMRLWDKA 87
           +  +L FN+TSF      +I Y   A PD +  +      +T+  G  TY++ + +W   
Sbjct: 32  VVDSLYFNFTSFRQGDPGDIFYHGDATPDEDGTVNFNNAEQTSQVGWITYSKKVPIWSHK 91

Query: 88  TGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSI 147
           TG  +DF+T FSF ID+RN S    G+ FFLAP G+++P    GG   L       +SS 
Sbjct: 92  TGKASDFSTSFSFKIDARNLSADGHGICFFLAPMGAQLPAYSVGGFLNLFTRKNNYSSSF 151

Query: 148 PFVAVEFDVYVN-SWDP--TFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTH 204
           P V VEFD + N  WDP    SHVGI+ NS+ S    SW +   S     A ISY+S T 
Sbjct: 152 PLVHVEFDTFNNPGWDPNDVGSHVGINNNSLVSSNYTSWNASSHSQDICHAKISYDSVTK 211

Query: 205 NLSVAFT---GFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNS 261
           NLSV +       ++      L Y +DL + LP  V FGF  A G             N+
Sbjct: 212 NLSVTWAYELTATSDPKESSSLSYIIDLAKVLPSDVMFGFIAAAGT------------NT 259

Query: 262 SLEMDDETTNPVSNPKRRRKNRTALVVGLSLGGGVLVGGVVL---IIWLAGIGRKRKEGD 318
                       S    +  +R  LV+G+S  G V +  +V+   ++W +   RK+KE D
Sbjct: 260 EEHRLLSWELSSSLDSDKADSRIGLVIGISASGFVFLTFMVITTVVVW-SRKQRKKKERD 318

Query: 319 EEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNS 378
            E+       I+ + ER AGP++F YK+L  ATN F+  +KLG+GGFG VY+G  +E N+
Sbjct: 319 IENMIS----INKDLEREAGPRKFSYKDLVSATNRFSSHRKLGEGGFGAVYEGNLKEINT 374

Query: 379 YIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
            +AVK++S  S+QG  E+ +EVKIIS+LRHRNLVQL+GWC+EK E LL+YE +PNGSL+S
Sbjct: 375 MVAVKKLSGDSRQGKNEFLNEVKIISKLRHRNLVQLIGWCNEKNEFLLIYELVPNGSLNS 434

Query: 439 HLF-KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
           HLF K  +LL+W+ RYKI   LAS LLYL EEW+QCV+HRDIK+SNIMLDS FN K+GDF
Sbjct: 435 HLFGKRPNLLSWDIRYKIGLGLASALLYLHEEWDQCVLHRDIKASNIMLDSEFNVKLGDF 494

Query: 498 GLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPI--- 554
           GLARL+ H  GS TT LAGT GYMAPE    G ASKESD+YSFGIV LEI  GRK +   
Sbjct: 495 GLARLMNHELGSHTTGLAGTFGYMAPEYVMKGSASKESDIYSFGIVLLEIVTGRKSLERT 554

Query: 555 ----NPKAPQGQVSLLQWVWDLYGNGKLLEA-VDPRLCRDFDGQQIERLMIVGLWCAHPD 609
               +      + SL++ VW+LYG  +L+ + VD +L  DFD ++ E L+++GLWCAHPD
Sbjct: 555 QEDNSDTESDDEKSLVEKVWELYGKQELITSCVDDKLGEDFDKKEAECLLVLGLWCAHPD 614

Query: 610 ENLRPSIRQVIHVLNFEAPLPALPPKMPVPTY 641
           +N RPSI+Q I V+NFE+PLP LP K PV  Y
Sbjct: 615 KNSRPSIKQGIQVMNFESPLPDLPLKRPVAMY 646

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FHG4|LRKS7_ARATH Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana GN=LECRKS7 PE=2 SV=1

 Score =  412 bits (1058), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 255/674 (37%), Positives = 377/674 (55%), Gaps = 61/674 (9%)

Query: 13  LLLSFFT--ITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVI----QLP 66
           LL+ FFT    +S    I   +  + F + SF+ +   N+T+       N V+    +L 
Sbjct: 7   LLVIFFTWITALSMSKPIFVSSDNMNFTFKSFTIR---NLTFLGDSHLRNGVVGLTRELG 63

Query: 67  ANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNS--SYYADGLAFFLAPQGSK 124
               ++G   YN  +R +D  +     F+THFSF + + N   +   DGLAFFL+     
Sbjct: 64  VPDTSSGTVIYNNPIRFYDPDSNTTASFSTHFSFTVQNLNPDPTSAGDGLAFFLSHDNDT 123

Query: 125 IPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSW--DPTFSHVGIDINSVKSKKN-- 180
           +     GG  GL   ++P+ +   FVA+EFD  ++    DP  +H+G+D++S+ S     
Sbjct: 124 L--GSPGGYLGLVNSSQPMKNR--FVAIEFDTKLDPHFNDPNGNHIGLDVDSLNSISTSD 179

Query: 181 --VSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQG-----LDYQVDLRQHL 233
             +S   D+KSG+   +WI Y +    L+V F  + + +   +      L   +DL   L
Sbjct: 180 PLLSSQIDLKSGKSITSWIDYKNDLRLLNV-FLSYTDPVTTTKKPEKPLLSVNIDLSPFL 238

Query: 234 PEFVTFGFSMATGVDFAIFSIYSWEFNSSLEM-------------DDETTN--PVSNPKR 278
              +  GFS +T     I  I +W F +S  +             D    N  PV  P +
Sbjct: 239 NGEMYVGFSGSTEGSTEIHLIENWSFKTSGFLPVRSKSNHLHNVSDSSVVNDDPVVIPSK 298

Query: 279 RRKNRTALVVGLSLGGGVLVGGVVLIIWLAGIGRKRKEGDEEDNQGFSEYIDDEFERGAG 338
           +R++R  L +GL +   VL+   + +     + + +    E++ +  +E I        G
Sbjct: 299 KRRHRHNLAIGLGISCPVLICLALFVFGYFTLKKWKSVKAEKELK--TELI-------TG 349

Query: 339 PKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS 398
            + F YKEL  AT  F+  + +G+G FG VY+  F  + +  AVKR    S +G  E+ +
Sbjct: 350 LREFSYKELYTATKGFHSSRVIGRGAFGNVYRAMFVSSGTISAVKRSRHNSTEGKTEFLA 409

Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSL----LTWEFRYK 454
           E+ II+ LRH+NLVQL GWC+EK ELLLVYEFMPNGSLD  L++E+      L W  R  
Sbjct: 410 ELSIIACLRHKNLVQLQGWCNEKGELLLVYEFMPNGSLDKILYQESQTGAVALDWSHRLN 469

Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           IA  LAS L YL  E EQ VVHRDIK+SNIMLD NFNA++GDFGLARL EH K   +T+ 
Sbjct: 470 IAIGLASALSYLHHECEQQVVHRDIKTSNIMLDINFNARLGDFGLARLTEHDKSPVSTLT 529

Query: 515 AGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ--VSLLQWVWDL 572
           AGTMGY+APE    G A++++D +S+G+V LE+ACGR+PI+ K P+ Q  V+L+ WVW L
Sbjct: 530 AGTMGYLAPEYLQYGTATEKTDAFSYGVVILEVACGRRPID-KEPESQKTVNLVDWVWRL 588

Query: 573 YGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE---APL 629
           +  G++LEAVD RL  +FD + +++L++VGL CAHPD N RPS+R+V+ +LN E   +P+
Sbjct: 589 HSEGRVLEAVDERLKGEFDEEMMKKLLLVGLKCAHPDSNERPSMRRVLQILNNEIEPSPV 648

Query: 630 PALPPKMPVPTYLS 643
           P + P +     LS
Sbjct: 649 PKMKPTLSFSCGLS 662

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M2S4|LRKS4_ARATH L-type lectin-domain containing receptor kinase S.4 OS=Arabidopsis thaliana GN=LECRKS4 PE=1 SV=1

 Score =  376 bits (965), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 232/601 (38%), Positives = 340/601 (56%), Gaps = 51/601 (8%)

Query: 68  NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAP----QGS 123
            +   G A Y+  +R           F+T F+  +     +    GLAF + P    +GS
Sbjct: 58  TQRVIGHAFYSLPIRFKPIGVNRALSFSTSFAIAMVPEFVTLGGHGLAFAITPTPDLRGS 117

Query: 124 KIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVY--VNSWDPTFSHVGIDINSVKS---- 177
            +P+   G       ++  +N S  F AVEFD    +   D   +HVGIDINS++S    
Sbjct: 118 -LPSQYLG-----LLNSSRVNFSSHFFAVEFDTVRDLEFEDINDNHVGIDINSMESSIST 171

Query: 178 ----------KKNVSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQV 227
                     KK +     +  GR  +AWI Y+S+   L V  + F      +  L Y V
Sbjct: 172 PAGYFLANSTKKELF----LDGGRVIQAWIDYDSNKKRLDVKLSPFSEK-PKLSLLSYDV 226

Query: 228 DLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLEMDDETTNPV----SNPKRRRKNR 283
           DL   L + +  GFS +TG+  +   I  W FN S E    +   +    S+ K+R+K R
Sbjct: 227 DLSSVLGDEMYVGFSASTGLLASSHYILGWNFNMSGEAFSLSLPSLPRIPSSIKKRKKKR 286

Query: 284 TALVVGLSLGGGVLVGGVVLIIWLAGIGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFP 343
            +L++G+SL   +L+  V++   L  + RK K+ D  +          E+E   GP RF 
Sbjct: 287 QSLILGVSLLCSLLIFAVLVAASLFVV-RKVKDEDRVE----------EWELDFGPHRFS 335

Query: 344 YKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKII 403
           Y+EL  ATN F D + LG GGFG VYKG    ++ ++AVKR+S  S+QG++E+ SEV  I
Sbjct: 336 YRELKKATNGFGDKELLGSGGFGKVYKGKLPGSDEFVAVKRISHESRQGVREFMSEVSSI 395

Query: 404 SRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENS--LLTWEFRYKIAQDLAS 461
             LRHRNLVQLLGWC  + +LLLVY+FMPNGSLD +LF EN   +LTW+ R+KI + +AS
Sbjct: 396 GHLRHRNLVQLLGWCRRRDDLLLVYDFMPNGSLDMYLFDENPEVILTWKQRFKIIKGVAS 455

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
           GLLYL E WEQ V+HRDIK++N++LDS  N ++GDFGLA+L EH      T + GT GY+
Sbjct: 456 GLLYLHEGWEQTVIHRDIKAANVLLDSEMNGRVGDFGLAKLYEHGSDPGATRVVGTFGYL 515

Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA 581
           APE   +GK +  +DVY+FG V LE+ACGR+PI   A   ++ ++ WVW  + +G + + 
Sbjct: 516 APELTKSGKLTTSTDVYAFGAVLLEVACGRRPIETSALPEELVMVDWVWSRWQSGDIRDV 575

Query: 582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTY 641
           VD RL  +FD +++  ++ +GL C++    +RP++RQV+  L  + P P +   +P P +
Sbjct: 576 VDRRLNGEFDEEEVVMVIKLGLLCSNNSPEVRPTMRQVVMYLEKQFPSPEV---VPAPDF 632

Query: 642 L 642
           L
Sbjct: 633 L 633

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M345|LRK42_ARATH L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana GN=LECRK42 PE=2 SV=1

 Score =  374 bits (961), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 227/628 (36%), Positives = 342/628 (54%), Gaps = 30/628 (4%)

Query: 25  CLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLP-ANRETAGRATYNQSMRL 83
           C  +I  +  L F Y  F P   D      A    N +++L   + +  G A   + +R 
Sbjct: 15  CQIMISSSQNLNFTYNGFHPPLTDISLQGLATVTPNGLLKLTNTSVQKTGHAFCTERIRF 74

Query: 84  WDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPL 143
            D   GN++ F+T F F I S+  +    G+AF +AP    +P        GL   +   
Sbjct: 75  KDSQNGNVSSFSTTFVFAIHSQIPTLSGHGIAFVVAPT-LGLPFALPSQYIGLFNISNNG 133

Query: 144 NSSIPFVAVEFDVYVNS--WDPTFSHVGIDINSVKSKK-NVSWWSD---------VKSGR 191
           N +    AVEFD   +S   DP  +HVGID+N ++S   + + + D         + S +
Sbjct: 134 NDTNHIFAVEFDTIQSSEFGDPNDNHVGIDLNGLRSANYSTAGYRDDHDKFQNLSLISRK 193

Query: 192 RNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAI 251
           R + WI Y++ +H + V    F ++      + Y  DL   L E +  GFS ATG   + 
Sbjct: 194 RIQVWIDYDNRSHRIDVTVAPFDSDKPRKPLVSYVRDLSSILLEDMYVGFSSATGSVLSE 253

Query: 252 FSIYSWEFNSSLEMDDETTNPVSNPKRRRKNRTA--LVVGLSLGGGVLVGGVVLIIWLAG 309
             +  W F  + E    + + +    R    R +    +G+ L    L+  ++ + +   
Sbjct: 254 HFLVGWSFRLNGEAPMLSLSKLPKLPRFEPRRISEFYKIGMPLISLSLIFSIIFLAFY-- 311

Query: 310 IGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVY 369
           I R++K+ +EE          D++E   G  RF +KEL  AT  F +   LG GGFG VY
Sbjct: 312 IVRRKKKYEEEL---------DDWETEFGKNRFRFKELYHATKGFKEKDLLGSGGFGRVY 362

Query: 370 KGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE 429
           +G    T   +AVKRVS  SKQG+KE+ +E+  I R+ HRNLV LLG+C  + ELLLVY+
Sbjct: 363 RGILPTTKLEVAVKRVSHDSKQGMKEFVAEIVSIGRMSHRNLVPLLGYCRRRGELLLVYD 422

Query: 430 FMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS 488
           +MPNGSLD +L+    + L W+ R  I + +ASGL YL EEWEQ V+HRD+K+SN++LD+
Sbjct: 423 YMPNGSLDKYLYNNPETTLDWKQRSTIIKGVASGLFYLHEEWEQVVIHRDVKASNVLLDA 482

Query: 489 NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
           +FN ++GDFGLARL +H    QTT + GT+GY+APE + TG+A+  +DVY+FG   LE+ 
Sbjct: 483 DFNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEHSRTGRATTTTDVYAFGAFLLEVV 542

Query: 549 CGRKPIN-PKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL-CRDFDGQQIERLMIVGLWCA 606
            GR+PI    A      L++WV+ L+  G ++EA DP+L    +D +++E ++ +GL C+
Sbjct: 543 SGRRPIEFHSASDDTFLLVEWVFSLWLRGNIMEAKDPKLGSSGYDLEEVEMVLKLGLLCS 602

Query: 607 HPDENLRPSIRQVIHVLNFEAPLPALPP 634
           H D   RPS+RQV+  L  +  LP L P
Sbjct: 603 HSDPRARPSMRQVLQYLRGDMALPELTP 630

Required during pollen development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LYX1|LRK82_ARATH L-type lectin-domain containing receptor kinase VIII.2 OS=Arabidopsis thaliana GN=LECRK82 PE=2 SV=1

 Score =  370 bits (950), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 231/617 (37%), Positives = 338/617 (54%), Gaps = 63/617 (10%)

Query: 64  QLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGS 123
           +L     TAG+A Y + ++     T +   FTT+FSF + + N S    GLAF ++P   
Sbjct: 65  ELSVPTSTAGKALYGKPVKFRHPETKSPASFTTYFSFSVTNLNPSSIGGGLAFVISPDED 124

Query: 124 KIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSW--DPTFSHVGIDINSVKSKKNV 181
            + +   GG  GLT++     S   FVAVEFD  ++    D   +HVG+D+N+V S    
Sbjct: 125 YLGST--GGFLGLTEET---GSGSGFVAVEFDTLMDVQFKDVNGNHVGLDLNAVVSAAVA 179

Query: 182 SWWS---DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVT 238
              +   D+KSG    +WI+Y+ S   L+V +  + N       L   +DL +++ + + 
Sbjct: 180 DLGNVDIDLKSGNAVNSWITYDGSGRVLTV-YVSYSNLKPKSPILSVPLDLDRYVSDSMF 238

Query: 239 FGFSMATGVDFAIFSIYSWEFNSSL----------------------------EMDDETT 270
            GFS +T     I S+  W F+SS                              +  +T 
Sbjct: 239 VGFSGSTQGSTEIHSVDWWSFSSSFEESSESPPPMPNSPPPSSPSSSITPSLSTVRRKTA 298

Query: 271 NPVSNPKRRR-KNRTALVVGLSLGGG---VLVGGVVLIIWLAGIGRKRKEGDEEDNQGFS 326
           +P S+ + +  K   A V G+   G     L  GV++ ++   I   RK          S
Sbjct: 299 DPSSSCRNKLCKKSPAAVAGVVTAGAFFLALFAGVIIWVYSKKIKYTRK----------S 348

Query: 327 EYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS 386
           E +  E  +   P+ F YKEL LAT+ F+  + +G G FG VYKG  +++   IA+KR S
Sbjct: 349 ESLASEIMKS--PREFTYKELKLATDCFSSSRVIGNGAFGTVYKGILQDSGEIIAIKRCS 406

Query: 387 QGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSL 446
             S QG  E+ SE+ +I  LRHRNL++L G+C EK E+LL+Y+ MPNGSLD  L++  + 
Sbjct: 407 HIS-QGNTEFLSELSLIGTLRHRNLLRLQGYCREKGEILLIYDLMPNGSLDKALYESPTT 465

Query: 447 LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA 506
           L W  R KI   +AS L YL +E E  ++HRD+K+SNIMLD+NFN K+GDFGLAR  EH 
Sbjct: 466 LPWPHRRKILLGVASALAYLHQECENQIIHRDVKTSNIMLDANFNPKLGDFGLARQTEHD 525

Query: 507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQG----- 561
           K    T  AGTMGY+APE   TG+A++++DV+S+G V LE+  GR+PI    P+      
Sbjct: 526 KSPDATAAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVCTGRRPITRPEPEPGLRPG 585

Query: 562 -QVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
            + SL+ WVW LY  GKLL AVD RL  +F+ +++ R+M+VGL C+ PD   RP++R V+
Sbjct: 586 LRSSLVDWVWGLYREGKLLTAVDERLS-EFNPEEMSRVMMVGLACSQPDPVTRPTMRSVV 644

Query: 621 HVLNFEAPLPALPPKMP 637
            +L  EA +P +P   P
Sbjct: 645 QILVGEADVPEVPIAKP 661

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O04534|LRK51_ARATH Putative L-type lectin-domain containing receptor kinase V.1 OS=Arabidopsis thaliana GN=LECRK51 PE=3 SV=1

 Score =  370 bits (949), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 225/599 (37%), Positives = 338/599 (56%), Gaps = 40/599 (6%)

Query: 55  AYPDSNRVIQLP-ANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADG 113
           AY ++N +I+L  +  +T G+  YN  +R  +   G ++ F+T F F I+  N  Y   G
Sbjct: 40  AYINNNGLIRLTNSTPQTTGQVFYNDQLRFKNSVNGTVSSFSTTFVFSIEFHNGIYGGYG 99

Query: 114 LAFFLAPQGSKIPT--NKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSW--DPTFSHVG 169
           +AF + P     PT      G F  +   +P N     VAVE D  V+    D   +HVG
Sbjct: 100 IAFVICPTRDLSPTFPTTYLGLFNRSNMGDPKNH---IVAVELDTKVDQQFEDKDANHVG 156

Query: 170 IDINSVKSKKNV--SWWSD--------VKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVV 219
           IDIN++ S       ++ D        + SG+  + WI Y+S    ++V           
Sbjct: 157 IDINTLVSDTVALAGYYMDNGTFRSLLLNSGQPMQIWIEYDSKQKQINVTLHPLYVPKPK 216

Query: 220 MQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLEMDDETTNPVSNPKRR 279
           +  L  + DL  +L E +  GF+  TG   A   I  W F  +    D   +P   PK  
Sbjct: 217 IPLLSLEKDLSPYLLELMYVGFTSTTGDLTASHYILGWTFKMNGTTPD--IDPSRLPKIP 274

Query: 280 RKNRT-------ALVVGLSLGGGVLVGGVVLIIWLAGIGRKRKEGDEEDNQGFSEYIDDE 332
           R N+         L + L++ G +++  + L +WL     KRK+          E ++D 
Sbjct: 275 RYNQPWIQSPNGILTISLTVSGVIILIILSLSLWLF---LKRKK--------LLEVLED- 322

Query: 333 FERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQG 392
           +E   GP RF +K+L +AT  F D + LG+GGFG VYKG    +N  IAVK VS  S+QG
Sbjct: 323 WEVQFGPHRFAFKDLHIATKGFKDTEVLGKGGFGKVYKGTLPVSNVEIAVKMVSHDSRQG 382

Query: 393 IKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENS-LLTWEF 451
           ++E+ +E+  I RLRH NLV+L G+C  K EL LVY+ M  GSLD  L+ + +  L W  
Sbjct: 383 MREFIAEIATIGRLRHPNLVRLQGYCRHKGELYLVYDCMAKGSLDKFLYHQQTGNLDWSQ 442

Query: 452 RYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT 511
           R+KI +D+ASGL YL ++W Q ++HRDIK +NI+LD+N NAK+GDFGLA+L +H    QT
Sbjct: 443 RFKIIKDVASGLYYLHQQWVQVIIHRDIKPANILLDANMNAKLGDFGLAKLCDHGTDPQT 502

Query: 512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWD 571
           + +AGT+GY++PE + TGKAS  SDV++FGIV LEIACGRKPI P+A Q ++ L  WV +
Sbjct: 503 SHVAGTLGYISPELSRTGKASTRSDVFAFGIVMLEIACGRKPILPRASQREMVLTDWVLE 562

Query: 572 LYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLP 630
            + N  +++ +D ++ +++  +Q   ++ +GL+C+HP   +RP++  VI +L+  A LP
Sbjct: 563 CWENEDIMQVLDHKIGQEYVEEQAALVLKLGLFCSHPVAAIRPNMSSVIQLLDSVAQLP 621

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81292|LRK43_ARATH L-type lectin-domain containing receptor kinase IV.3 OS=Arabidopsis thaliana GN=LECRK43 PE=2 SV=1

 Score =  360 bits (923), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 224/628 (35%), Positives = 338/628 (53%), Gaps = 39/628 (6%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQLPANRE-TAGRATYNQSMRLWDKATG 89
           + +L F Y SF  +   NI+ +  A   SN +++L      + G A Y + +R  D    
Sbjct: 24  SQSLNFTYNSFH-RPPTNISIQGIATVTSNGILKLTDKTVISTGHAFYTEPIRFKDSPND 82

Query: 90  NLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPF 149
            ++ F+T F   I S   +    G+AFF+AP    + +       GL       N +   
Sbjct: 83  TVSSFSTTFVIGIYSGIPTISGHGMAFFIAPN-PVLSSAMASQYLGLFSSTNNGNDTNHI 141

Query: 150 VAVEFDVYVNSW--DPTFSHVGIDINSVKSKKN--VSWWSDVK--------SGRRNEAWI 197
           +AVEFD  +N    D   +HVGI+INS+ S K+  V +W ++         S +R + W+
Sbjct: 142 LAVEFDTIMNPEFDDTNDNHVGININSLTSVKSSLVGYWDEINQFNNLTLISRKRMQVWV 201

Query: 198 SYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSW 257
            Y+  T+ + V    F         +    DL     + +  GFS ATG   +   ++ W
Sbjct: 202 DYDDRTNQIDVTMAPFGEVKPRKALVSVVRDLSSVFLQDMYLGFSAATGYVLSEHFVFGW 261

Query: 258 EFNSS------LEMDDETTNPVSNP---KRRRKNRTALVVGLSLGGGVLVGGVVLIIWLA 308
            F         L +      P   P   +R  KNR  L   L +    +V  + L+ ++ 
Sbjct: 262 SFMVKGKTAPPLTLSKVPKFPRVGPTSLQRFYKNRMPLFSLLLIPVLFVVSLIFLVRFI- 320

Query: 309 GIGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGV 368
            + R+RK         F+E  +D +E   G  R  +K+L  AT  F D   LG GGFG V
Sbjct: 321 -VRRRRK---------FAEEFED-WETEFGKNRLRFKDLYYATKGFKDKDLLGSGGFGRV 369

Query: 369 YKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY 428
           Y+G    T   IAVKRVS  S+QG+KE+ +E+  I R+ HRNLV LLG+C  + ELLLVY
Sbjct: 370 YRGVMPTTKKEIAVKRVSNESRQGLKEFVAEIVSIGRMSHRNLVPLLGYCRRRDELLLVY 429

Query: 429 EFMPNGSLDSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD 487
           ++MPNGSLD +L+      L W+ R+ +   +ASGL YL EEWEQ V+HRDIK+SN++LD
Sbjct: 430 DYMPNGSLDKYLYDCPEVTLDWKQRFNVIIGVASGLFYLHEEWEQVVIHRDIKASNVLLD 489

Query: 488 SNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
           + +N ++GDFGLARL +H    QTT + GT GY+AP+   TG+A+  +DV++FG++ LE+
Sbjct: 490 AEYNGRLGDFGLARLCDHGSDPQTTRVVGTWGYLAPDHVRTGRATTATDVFAFGVLLLEV 549

Query: 548 ACGRKPINPKAPQGQ-VSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCA 606
           ACGR+PI  +    + V L+  V+  +  G +L+A DP L   +D +++E ++ +GL C+
Sbjct: 550 ACGRRPIEIEIESDESVLLVDSVFGFWIEGNILDATDPNLGSVYDQREVETVLKLGLLCS 609

Query: 607 HPDENLRPSIRQVIHVLNFEAPLPALPP 634
           H D  +RP++RQV+  L  +A LP L P
Sbjct: 610 HSDPQVRPTMRQVLQYLRGDATLPDLSP 637

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SZD5|LRK59_ARATH L-type lectin-domain containing receptor kinase V.9 OS=Arabidopsis thaliana GN=LECRK59 PE=2 SV=1

 Score =  358 bits (919), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 226/600 (37%), Positives = 334/600 (55%), Gaps = 41/600 (6%)

Query: 55  AYPDSNRVIQLPANRE-TAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADG 113
           A  +S  +++L  + E + G   YN  +R  +   G ++ F+T F F I S  ++    G
Sbjct: 41  AITNSKGLMKLTNSSEFSYGHVFYNSPVRFKNSPNGTVSSFSTTFVFAIVSNVNALDGHG 100

Query: 114 LAFFLAPQGSKIPTNKGG---GSFGLTKDNEPLNSSIPFVAVEFDVYVNSW--DPTFSHV 168
           LAF ++P    +P +      G F LT + +P N     VAVEFD + N    D   +HV
Sbjct: 101 LAFVISPTKG-LPYSSSSQYLGLFNLTNNGDPSNH---IVAVEFDTFQNQEFDDMDNNHV 156

Query: 169 GIDINSVKSKK--NVSWWSDVKSGRRN---------EAWISYNSSTHNLSVAFTGFRNNL 217
           GIDINS+ S+K     ++ D     +N         +AWI Y+SS   L+V         
Sbjct: 157 GIDINSLSSEKASTAGYYEDDDGTFKNIRLINQKPIQAWIEYDSSRRQLNVTIHPIHLPK 216

Query: 218 VVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEF--NSSLEMDDETTNPVSN 275
             +  L    DL  +L + +  GF+ ATG   +   I  W F  N +    D +  P   
Sbjct: 217 PKIPLLSLTKDLSPYLFDSMYVGFTSATGRLRSSHYILGWTFKLNGTASNIDISRLP-KL 275

Query: 276 PKRRRKNRTALVVGLSLGGGVLVGGVVLII-WLAGIGRKRKEGDEEDNQGFSEYIDDEFE 334
           P+  R      ++ +SL    L   V L I ++  + RK+            E ++D +E
Sbjct: 276 PRDSRSTSVKKILAISLSLTSLAILVFLTISYMLFLKRKK----------LMEVLED-WE 324

Query: 335 RGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIK 394
              GP RF YK+L +AT  F + + LG+GGFG VYKG    +N  IAVK+VS  S+QG++
Sbjct: 325 VQFGPHRFAYKDLYIATKGFRNSELLGKGGFGKVYKGTLSTSNMDIAVKKVSHDSRQGMR 384

Query: 395 EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRY 453
           E+ +E+  I RLRH NLV+LLG+C  K EL LVY+ MP GSLD  L+ +    L W  R+
Sbjct: 385 EFVAEIATIGRLRHPNLVRLLGYCRRKGELYLVYDCMPKGSLDKFLYHQPEQSLDWSQRF 444

Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
           KI +D+ASGL YL  +W Q ++HRDIK +N++LD + N K+GDFGLA+L EH    QT+ 
Sbjct: 445 KIIKDVASGLCYLHHQWVQVIIHRDIKPANVLLDDSMNGKLGDFGLAKLCEHGFDPQTSN 504

Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQ-GQVSLLQWVWDL 572
           +AGT GY++PE + TGKAS  SDV++FGI+ LEI CGR+P+ P+A    ++ L  WV D 
Sbjct: 505 VAGTFGYISPELSRTGKASTSSDVFAFGILMLEITCGRRPVLPRASSPSEMVLTDWVLDC 564

Query: 573 YGNGKLLEAVDPRLCRD--FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLP 630
           + +  +L+ VD R+ +D  +  +Q+  ++ +GL+C+HP   +RPS+  VI  L+  A LP
Sbjct: 565 WED-DILQVVDERVKQDDKYLEEQVALVLKLGLFCSHPVAAVRPSMSSVIQFLDGVAQLP 623

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O80939|LRK41_ARATH L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana GN=LECRK41 PE=1 SV=1

 Score =  357 bits (916), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 216/584 (36%), Positives = 317/584 (54%), Gaps = 34/584 (5%)

Query: 70  ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNK 129
           +  G A Y + +R  D   G ++ F+T F F I S+ +     G+AF +AP  S +P   
Sbjct: 61  QKTGHAFYTKPIRFKDSPNGTVSSFSTSFVFAIHSQIAILSGHGIAFVVAPNAS-LPYGN 119

Query: 130 GGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSW--DPTFSHVGIDINSVKSKKN--VSWWS 185
                GL       N +    AVE D  +++   D   +HVGIDINS+KS ++    +W 
Sbjct: 120 PSQYIGLFNLANNGNETNHVFAVELDTILSTEFNDTNDNHVGIDINSLKSVQSSPAGYWD 179

Query: 186 D--------VKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFV 237
           +        + S +  + W+ Y+  T+ + V    F  +      +    DL   L + +
Sbjct: 180 EKGQFKNLTLISRKPMQVWVDYDGRTNKIDVTMAPFNEDKPTRPLVTAVRDLSSVLLQDM 239

Query: 238 TFGFSMATGVDFAIFSIYSWEFNSS-----LEMDDETTNPVSNPKRRRKNRTALVVGLSL 292
             GFS ATG   +   I  W F  +     L +      P   PKR  +      +G+ L
Sbjct: 240 YVGFSSATGSVLSEHYILGWSFGLNEKAPPLALSRLPKLPRFEPKRISEFYK---IGMPL 296

Query: 293 GGGVLVGGVVLIIWLAGIGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATN 352
               L+   + ++    I R+R++  EE  +   E+         G  RF +K+L  AT 
Sbjct: 297 ISLFLIFSFIFLVCY--IVRRRRKFAEELEEWEKEF---------GKNRFRFKDLYYATK 345

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLV 412
            F +   LG GGFG VYKG    T   IAVKRVS  S+QG+KE+ +E+  I R+ HRNLV
Sbjct: 346 GFKEKGLLGTGGFGSVYKGVMPGTKLEIAVKRVSHESRQGMKEFVAEIVSIGRMSHRNLV 405

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWE 471
            LLG+C  + ELLLVY++MPNGSLD +L+    + L W+ R K+   +ASGL YL EEWE
Sbjct: 406 PLLGYCRRRGELLLVYDYMPNGSLDKYLYNTPEVTLNWKQRIKVILGVASGLFYLHEEWE 465

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA 531
           Q V+HRD+K+SN++LD   N ++GDFGLARL +H    QTT + GT+GY+APE   TG+A
Sbjct: 466 QVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEHTRTGRA 525

Query: 532 SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL-QWVWDLYGNGKLLEAVDPRLCRDF 590
           +  +DV++FG   LE+ACGR+PI  +    +  LL  WV+ L+  G +L A DP +  + 
Sbjct: 526 TMATDVFAFGAFLLEVACGRRPIEFQQETDETFLLVDWVFGLWNKGDILAAKDPNMGSEC 585

Query: 591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPALPP 634
           D +++E ++ +GL C+H D   RPS+RQV+H L  +A LP L P
Sbjct: 586 DEKEVEMVLKLGLLCSHSDPRARPSMRQVLHYLRGDAKLPELSP 629

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	645
224096774	713	predicted protein [Populus trichocarpa]	0.968	0.876	0.666	0.0
224092745	681	predicted protein [Populus trichocarpa]	0.947	0.897	0.663	0.0
225470605	720	PREDICTED: L-type lectin-domain containi	0.967	0.866	0.652	0.0
356527993	709	PREDICTED: L-type lectin-domain containi	0.982	0.894	0.613	0.0
356527997	709	PREDICTED: L-type lectin-domain containi	0.978	0.889	0.607	0.0
224059892	613	predicted protein [Populus trichocarpa]	0.882	0.928	0.676	0.0
357476157	782	Class I heat shock protein [Medicago tru	0.964	0.795	0.624	0.0
147765964	692	hypothetical protein VITISV_007747 [Viti	0.937	0.874	0.641	0.0
356519481	691	PREDICTED: L-type lectin-domain containi	0.955	0.891	0.614	0.0
356528003	671	PREDICTED: L-type lectin-domain containi	0.941	0.904	0.603	0.0

>gi|224096774|ref|XP_002334671.1| predicted protein [Populus trichocarpa] gi|222874064|gb|EEF11195.1| predicted protein [Populus trichocarpa]

 Score =  850 bits (2195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/654 (66%), Positives = 512/654 (78%), Gaps = 29/654 (4%)

Query: 18  FTITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETA----- 72
           F  +  F L IIP AS L+FN+TSF    D NI+YE AYP ++  IQL  N   A     
Sbjct: 11  FVFSTLFTL-IIPSASGLSFNFTSFIVGADQNISYEEAYP-ADGAIQLTKNLRNANMNSS 68

Query: 73  -GRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTN-KG 130
            GRATY + M+LWD+A+GNLTDFTTHFSF IDS+  + Y DGLAFFLAP+GSK+P+N   
Sbjct: 69  SGRATYYKPMQLWDEASGNLTDFTTHFSFSIDSQRRTAYGDGLAFFLAPEGSKLPSNLSE 128

Query: 131 GGSFGLTKDNEPLNSSI-PFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKS 189
           G   GLT+ ++ LN++   FVAVEFD+Y N +DP   HVGIDINS++S  N++W  D+  
Sbjct: 129 GAGLGLTRRDQLLNTTANHFVAVEFDIYPNYFDPPGEHVGIDINSMQSVNNITWPCDISG 188

Query: 190 GRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDF 249
           GR  EAWISYNSSTHNLSVAFTG+RNN V MQ L   V LR +LPE V+FGFS +TG   
Sbjct: 189 GRITEAWISYNSSTHNLSVAFTGYRNNTVEMQFLSQIVSLRDYLPERVSFGFSASTGSAS 248

Query: 250 AIFSIYSWEFNSSLEMDDETTNPV---SNP--------------KRRRKNRTALVVGLSL 292
           A+ ++YSW+F+SSLE+DD  TNP+   +NP              + R+KNRT L VGL +
Sbjct: 249 ALHTLYSWDFSSSLEIDDNVTNPIDPATNPLDPAAASPPNGGSLRNRKKNRTGLAVGLGV 308

Query: 293 GGGVLVGGVVLIIWLAGIGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATN 352
           GGG +V G  L+  +    R  +E DE D     EY+DDEFERG GPK+F Y+ELA ATN
Sbjct: 309 GGGAIVVGAALVGIVIKFMRGHEE-DEGDGHVLEEYMDDEFERGTGPKKFSYQELARATN 367

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLV 412
           +F D++KLG+GGFGGVYKGF +  +S++AVKRVS+GSKQGIKEYA+EVKIISRLRHRNLV
Sbjct: 368 NFKDEEKLGEGGFGGVYKGFLKGIDSFVAVKRVSRGSKQGIKEYAAEVKIISRLRHRNLV 427

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
           QL+GWCHE+KELLLVYEFMP+GSLDSHLFKE SLLTWE RYKI Q LASGLLYL EEWEQ
Sbjct: 428 QLIGWCHERKELLLVYEFMPHGSLDSHLFKETSLLTWEVRYKIVQGLASGLLYLHEEWEQ 487

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKAS 532
           CVVHRDIKSSNIMLDS FNAK+GDFGLARLV+H KGSQTTVLAGTMGYMAPECA TGKAS
Sbjct: 488 CVVHRDIKSSNIMLDSEFNAKLGDFGLARLVDHGKGSQTTVLAGTMGYMAPECAMTGKAS 547

Query: 533 KESDVYSFGIVALEIACGRKPINPKAP-QGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD 591
           +ESDVYSFGIVALEIACGRKPINPKA  + QVS++QWVW+LYG GKLLEAVDPRLC DF+
Sbjct: 548 RESDVYSFGIVALEIACGRKPINPKASNEDQVSMVQWVWELYGEGKLLEAVDPRLCGDFN 607

Query: 592 GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTYLSPP 645
             Q+ERLMIVGL CAHPDE+LRPSIRQ +HVLNF+APLP LP KMPVP+Y +PP
Sbjct: 608 KTQMERLMIVGLSCAHPDEHLRPSIRQALHVLNFDAPLPILPSKMPVPSYFAPP 661

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092745|ref|XP_002334872.1| predicted protein [Populus trichocarpa] gi|222831889|gb|EEE70366.1| predicted protein [Populus trichocarpa]

 Score =  833 bits (2153), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/636 (66%), Positives = 495/636 (77%), Gaps = 25/636 (3%)

Query: 18  FTITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETA----- 72
           F  +  F L IIP AS L+FN+TSF    D NI+YE AYP ++  IQL  N   A     
Sbjct: 11  FVFSTLFTL-IIPSASGLSFNFTSFVVGADQNISYEEAYP-ADGAIQLTKNLRNANMNSS 68

Query: 73  -GRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGG 131
            GRATY + M+LWD+A+GNLTDFTTHFSF IDS+  + Y DGLAFFL P+    P    G
Sbjct: 69  SGRATYYKPMQLWDEASGNLTDFTTHFSFSIDSQGQTAYGDGLAFFLGPE-ELPPLRFQG 127

Query: 132 GSFGLTKDNEPLNSSI-PFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSG 190
           GS GL ++N+ LN++   FVAVEFD++ N +DP   HVGIDINS++S  N++W  D++ G
Sbjct: 128 GSLGLLRNNQALNTTDNHFVAVEFDIFQNYFDPPGEHVGIDINSMQSVNNITWLCDIRRG 187

Query: 191 RRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFA 250
           RR EAWISYNSSTHNLSVAFTG+RNN V MQ L   V LR +LPE V+FGFS +TG  FA
Sbjct: 188 RRTEAWISYNSSTHNLSVAFTGYRNNTVEMQFLSQIVSLRDYLPERVSFGFSASTGDLFA 247

Query: 251 IFSIYSWEFNSSLEMDDETTNPVSNPKRRRKNRTALVVGLSLGGGVLVGGVVLIIWLAGI 310
           I ++YSW+F+SSLE+DD       N +        +  G  + G  LVG V  I ++ G 
Sbjct: 248 IHTLYSWDFSSSLEIDD-------NNRTGLAVGLGVGGGAIVVGAALVGFV--IKFMCG- 297

Query: 311 GRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYK 370
                E DEE      EY+DDEFERG GPK+F Y+ELA AT++F D++KLG+GGFGGVYK
Sbjct: 298 ----HEEDEEGGHVLEEYMDDEFERGTGPKKFSYQELARATSNFKDEEKLGEGGFGGVYK 353

Query: 371 GFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           GF +E +S++AVKRVS+GSKQGIKEYA+EVKIISRLRHRNLVQL+GWCHE+KELLLVYEF
Sbjct: 354 GFLKEIDSFVAVKRVSRGSKQGIKEYAAEVKIISRLRHRNLVQLIGWCHERKELLLVYEF 413

Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           MP+GSLDSHLFKE SLLTWE RYKI Q LASGLLYL EEWEQCVVHRDIKSSNIMLDS F
Sbjct: 414 MPHGSLDSHLFKETSLLTWEVRYKIVQGLASGLLYLHEEWEQCVVHRDIKSSNIMLDSEF 473

Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
           NAK+GDFGLARLV+H KGSQTTVLAGTMGYMAPECA TGKAS+ESDVYSFGIVALEIACG
Sbjct: 474 NAKLGDFGLARLVDHGKGSQTTVLAGTMGYMAPECAMTGKASRESDVYSFGIVALEIACG 533

Query: 551 RKPINPKAP-QGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPD 609
           RKPINPKA  + QVS++QWVW+LYG GKLLEAVDPRLC DF+  Q+ERLMIVGL CAHPD
Sbjct: 534 RKPINPKASNEDQVSMVQWVWELYGEGKLLEAVDPRLCGDFNKTQMERLMIVGLSCAHPD 593

Query: 610 ENLRPSIRQVIHVLNFEAPLPALPPKMPVPTYLSPP 645
           E+LRPSIRQ +H+LNF+APLP LP KMPVP+Y +PP
Sbjct: 594 EHLRPSIRQALHILNFDAPLPILPSKMPVPSYFAPP 629

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470605|ref|XP_002262748.1| PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Vitis vinifera]

 Score =  828 bits (2139), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/642 (65%), Positives = 502/642 (78%), Gaps = 18/642 (2%)

Query: 17  FFTITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLP-ANRETAGRA 75
           F  I+I F L +IP A++L FN+TSFSP Y+DNITYE +    N++IQL  A   + G A
Sbjct: 31  FTMISIFFILLMIPSATSLDFNFTSFSP-YNDNITYEGSAFPRNQIIQLTQAQSASIGWA 89

Query: 76  TYNQSMRLWDKATGNLTDFTTHFSFVIDSRN-SSYYADGLAFFLAPQGSKIPTNKGGGSF 134
           TY Q + LWDKA+GNLTDFTTHFSFVID++N S  + DG+AFFL P  S+ P    GG  
Sbjct: 90  TYVQPLHLWDKASGNLTDFTTHFSFVIDTQNRSGSHGDGIAFFLMPADSQKPNVTKGGGL 149

Query: 135 GLTKDNEPLNSSI-PFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRN 193
           GL  D +PLN+++  FVAVEFD+Y N WDP  +H GIDINSV+S +NV WW  + +GRRN
Sbjct: 150 GLASDTQPLNTTVNHFVAVEFDIYKNRWDPNDTHAGIDINSVQSIRNVKWWDSIINGRRN 209

Query: 194 EAWISYNSSTHNLSVAFTGFRNNLVVMQ-GLDYQVDLRQHLPEFVTFGFSMATGVDFAIF 252
           +AWISYNSS+ NLSV FTGFRN+  ++Q  L Y+VDLR +LPE+V+FGFS ATG   AI 
Sbjct: 210 DAWISYNSSSKNLSVVFTGFRNDSTILQDNLYYEVDLRLYLPEWVSFGFSGATGNASAIH 269

Query: 253 SIYSWEFNSSLEMDDETTNPVS----------NPKRRRKNRTALVVGLSLGGGVLVGGVV 302
           +IYSW F+SSL+ D+  TNP S          N    RK +  LVVGL++GG   VGG+ 
Sbjct: 270 AIYSWSFSSSLQTDENKTNPTSPEAETPTSNPNSNPSRKIKVKLVVGLTVGGCAFVGGLS 329

Query: 303 LIIWLAGIGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQ 362
           L+++L    R+ K  +   +Q     ++D+FE+G GPK+F Y ELA +TN+F ++ KLG+
Sbjct: 330 LVLFLFLKSRRGKVDNPVIDQ---LSMEDDFEKGTGPKKFRYNELASSTNNFAEEGKLGE 386

Query: 363 GGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK 422
           GGFGGVYKGF +E +SYIAVKRVS GSKQGIKEY SEVKIISRLRHRNLVQL+GWCHEK+
Sbjct: 387 GGFGGVYKGFLKELDSYIAVKRVSSGSKQGIKEYVSEVKIISRLRHRNLVQLIGWCHEKR 446

Query: 423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS 482
           +LLLVYEFMPNGSL+SH+F E SLLTWE RYKIAQ LAS LLYL E WEQCV+HRDIKSS
Sbjct: 447 DLLLVYEFMPNGSLESHIFSERSLLTWEMRYKIAQGLASALLYLHEGWEQCVLHRDIKSS 506

Query: 483 NIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGI 542
           NIMLDS FNAK+GDFGLARLV+H KGSQTTVLAGTMGYMAPECATTGKASK+SD+YSFG+
Sbjct: 507 NIMLDSGFNAKLGDFGLARLVDHGKGSQTTVLAGTMGYMAPECATTGKASKQSDIYSFGV 566

Query: 543 VALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVG 602
           VALEIACGRKPIN KA + Q+ +L+WVWDLYG G +LEA DPRLC +FD QQ++ LM VG
Sbjct: 567 VALEIACGRKPINLKAKEDQIMMLEWVWDLYGKGNILEAADPRLCAEFDAQQMQCLMTVG 626

Query: 603 LWCAHPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTYLSP 644
           LWCAHPD NLRPS+R+VIHVLNFEAPLP LPPKMPVPTY  P
Sbjct: 627 LWCAHPDRNLRPSVREVIHVLNFEAPLPILPPKMPVPTYSIP 668

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527993|ref|XP_003532590.1| PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Glycine max]

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/650 (61%), Positives = 486/650 (74%), Gaps = 16/650 (2%)

Query: 9   SNSPLLLSFFTITIS-FCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPA 67
           SN      F  + +S F + IIP A  L+FN TSF P    +I YE +      VI+L  
Sbjct: 14  SNLSFSHHFLVMLLSIFFIFIIPCAFPLSFNITSFDPN-GKSIIYEGSANPVTPVIELTG 72

Query: 68  N-RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIP 126
           N R+  GRATY Q M LWDKATGNLTDFTTHFSFVIDSRN S Y DG+AFFLAP G K P
Sbjct: 73  NVRDITGRATYFQPMHLWDKATGNLTDFTTHFSFVIDSRNQSAYEDGMAFFLAPAGLKFP 132

Query: 127 TNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSD 186
               GG+ GLT +++ LNS+ PFVAVEFD+Y N  DP   HVGIDINS++S  NV+W +D
Sbjct: 133 YVSRGGALGLTLEDQRLNSTDPFVAVEFDIYENPDDPPGEHVGIDINSLRSVANVTWLAD 192

Query: 187 VKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATG 246
           +K G+ NE WISYNSS+ NLSV FTGF N+ ++ Q L    DLR HLPEFVT GFS ATG
Sbjct: 193 IKQGKLNEVWISYNSSSFNLSVVFTGFNNDTILRQHLSAITDLRLHLPEFVTVGFSAATG 252

Query: 247 VDFAIFSIYSWEFNSSLEMDDETTN--------PVSN---PKRRRKNRTALVVGLSLGGG 295
           +D AI S+ SW+F+S+L   +  T         P ++   P +++KN+T L VGLS+GG 
Sbjct: 253 IDTAIHSVNSWDFSSTLAAQENITKGADTVARYPATSNIAPSQKKKNKTGLAVGLSIGGF 312

Query: 296 VLVGGVVLIIWLAGIGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFN 355
           VL+GG+ LI    G+ +K K+G  E++  F EY+ ++F RGAGP+++ Y EL  A N F 
Sbjct: 313 VLIGGLGLIS--IGLWKKWKKGSVEEDLVFEEYMGEDFGRGAGPRKYSYAELTEAANGFK 370

Query: 356 DDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLL 415
           D+ KLGQGGFGGVYKG+ ++  S++A+KRVS+GS QGIKE+ASEV IISRLRHRNLV L+
Sbjct: 371 DEHKLGQGGFGGVYKGYLKDIKSHVAIKRVSEGSDQGIKEFASEVNIISRLRHRNLVHLI 430

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
           GWCH  K+LLLVYE+MPNGSLD HLFK+ SLL W  RY IA+ LAS LLYL EEWEQCVV
Sbjct: 431 GWCHAGKKLLLVYEYMPNGSLDIHLFKKQSLLKWTVRYNIARGLASALLYLHEEWEQCVV 490

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES 535
           HRDIKSSNIMLDS FNAK+GDFGLAR V+HAK +QTT LAGTMGYMAPECAT+G+ASKES
Sbjct: 491 HRDIKSSNIMLDSEFNAKLGDFGLARFVDHAKSAQTTALAGTMGYMAPECATSGRASKES 550

Query: 536 DVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQI 595
           DVYSFG+VALEIACGRKPIN +A + ++++++WVW LYG G++LEA D RL  +F+ +QI
Sbjct: 551 DVYSFGVVALEIACGRKPINHRAQENEINIVEWVWGLYGEGRILEAADQRLEGEFEEEQI 610

Query: 596 ERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTYLSPP 645
           + LMIVGLWCAHPD N RPS+RQ I VLNFEAPLP LP  +PVPTYL  P
Sbjct: 611 KCLMIVGLWCAHPDHNNRPSMRQAIQVLNFEAPLPNLPSSLPVPTYLEGP 660

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527997|ref|XP_003532592.1| PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Glycine max]

 Score =  801 bits (2069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/653 (60%), Positives = 484/653 (74%), Gaps = 22/653 (3%)

Query: 9   SNSPLLLSFFTITIS-FCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPA 67
           SN      F  + +S F + IIP A  L+FN TSF P    +I YE +      VI+L  
Sbjct: 14  SNLSFSHHFLVMLLSIFFIFIIPCAFPLSFNITSFDPN-GKSIIYEGSANPVTPVIELTG 72

Query: 68  N-RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIP 126
           N R++ GRATY Q M LWDKATGNLTDFTTHFSFVIDSRN S Y DG+AFFLAP G K P
Sbjct: 73  NVRDSTGRATYFQPMHLWDKATGNLTDFTTHFSFVIDSRNRSGYGDGMAFFLAPAGLKFP 132

Query: 127 TNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSD 186
               GG+ GLT +N+ LNS+ PFVAVEFD+Y N +DP   HVGIDINS++S  NV+W +D
Sbjct: 133 YVSRGGALGLTLENQRLNSTDPFVAVEFDIYKNFYDPPGEHVGIDINSLRSVANVTWLAD 192

Query: 187 VKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATG 246
           +K G+ NE WISYNSS+ NLSV FTGF N+ ++ Q L   +DLR HLPEFVT GFS ATG
Sbjct: 193 IKQGKLNEVWISYNSSSFNLSVVFTGFNNDTILRQHLSAIIDLRLHLPEFVTVGFSAATG 252

Query: 247 VDFAIFSIYSWEFNSSLEMDDETT--------NPVSN---PKRRRKNRTALVVGLSLGGG 295
              AI S+ SW+F+S+L   +  T        +P ++   P +++KN+T L VGLS+GG 
Sbjct: 253 SSTAIHSVNSWDFSSTLAAQENITKGADTVARSPATSNIAPSQKKKNKTGLAVGLSIGGF 312

Query: 296 VLVGGVVLI---IWLAGIGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATN 352
           VL+GG+ LI   +W     +K K+G  E+   F EY+  +F RG GP+++ Y EL  A N
Sbjct: 313 VLIGGLGLISICLW-----KKWKKGSVEEVHVFEEYMGKDFGRGGGPRKYSYAELTQAAN 367

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLV 412
            F D+ KLGQGGFGGVYKG+ ++  S++A+KRVS+ S QGIKE+ASEV IISRLRHRNLV
Sbjct: 368 GFKDEHKLGQGGFGGVYKGYLKDIKSHVAIKRVSESSDQGIKEFASEVNIISRLRHRNLV 427

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
            L+GWCH  K+LLLVYE+MPNGSLD HLFK+ SLL W  RY IA+ LAS LLYL EEWEQ
Sbjct: 428 HLIGWCHAGKKLLLVYEYMPNGSLDIHLFKKQSLLKWTVRYNIARGLASALLYLHEEWEQ 487

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKAS 532
           CVVHRDIKSSNIMLDS FNAK+GDFGLAR V+HAK +QTT LAGTMGYMAPECAT+G+AS
Sbjct: 488 CVVHRDIKSSNIMLDSEFNAKLGDFGLARFVDHAKSAQTTALAGTMGYMAPECATSGRAS 547

Query: 533 KESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDG 592
           KESDVYSFG+VALEIACGRKPIN +A + ++++++WVW LYG G++LEA D RL  +F+ 
Sbjct: 548 KESDVYSFGVVALEIACGRKPINHRAQENEINIVEWVWGLYGEGRILEAADQRLEGEFEE 607

Query: 593 QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTYLSPP 645
           +QI+ LMIVGLWCAHPD N RPS+RQ I VLNFEAPLP LP  +PVPTYL  P
Sbjct: 608 EQIKCLMIVGLWCAHPDHNNRPSMRQAIQVLNFEAPLPNLPSSLPVPTYLEGP 660

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224059892|ref|XP_002300009.1| predicted protein [Populus trichocarpa] gi|222847267|gb|EEE84814.1| predicted protein [Populus trichocarpa]

 Score =  796 bits (2057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/596 (67%), Positives = 480/596 (80%), Gaps = 27/596 (4%)

Query: 73  GRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTN-KGG 131
           GRATY + M+LWD+A+GNLTDFTTHFSF IDS+    Y DGLAFFLAP+GSK+P N   G
Sbjct: 6   GRATYYKPMQLWDEASGNLTDFTTHFSFSIDSQGRRAYGDGLAFFLAPEGSKLPPNLSQG 65

Query: 132 GSFGLTKDNEPLNSSI-PFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSG 190
            S GLT++++ LN++   FVAVEFD+Y N +DP   HVGIDINS++S  N++W  ++  G
Sbjct: 66  RSLGLTRNDQQLNTTDNHFVAVEFDIYKNYFDPPGEHVGIDINSMQSVNNITWLCNISGG 125

Query: 191 RRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFA 250
            + +AWISY+SSTHNLSVAFTG+RNN V MQ L   V LR +LPE V+FGFS +TG   A
Sbjct: 126 IKTDAWISYSSSTHNLSVAFTGYRNNTVEMQFLSQIVSLRDYLPERVSFGFSASTGSASA 185

Query: 251 IFSIYSWEFNSSLEMDDETTNPV-----------SNP------KRRRKNRTALVVGLSLG 293
           + ++YSW+F+SSLE+DD  TNP+           ++P      + R+KNRT L VGL +G
Sbjct: 186 LHTLYSWDFSSSLEIDDNVTNPIDPDTNTLDPAAASPPNGGSRRNRKKNRTGLAVGLGVG 245

Query: 294 GGVLVGGVVLIIWLAGIGRKRKEGDEEDNQG---FSEYIDDEFERGAGPKRFPYKELALA 350
           GG +V G  L+    G   K   G EED +G     EY+D+EFERG GPK+F Y+ELA A
Sbjct: 246 GGAIVVGAALV----GFVIKFMCGHEEDEEGGHVVEEYMDEEFERGTGPKKFSYQELARA 301

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN 410
           T++F D++KLG+GGFGGVYKGF +E +S++AVKRVS+GSKQGIKEYA+EVKIISRLRHRN
Sbjct: 302 TSNFKDEEKLGEGGFGGVYKGFLKEIDSFVAVKRVSRGSKQGIKEYAAEVKIISRLRHRN 361

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           LVQL+GWCHE+KELLLVYEFM +GSLDSHLFKE SLLTWE RYKI Q LASGLLYL EEW
Sbjct: 362 LVQLIGWCHERKELLLVYEFMSHGSLDSHLFKETSLLTWEVRYKIVQGLASGLLYLHEEW 421

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK 530
           EQCVVHRDIKSSNI+LDS FNAK+GDFGLARLV+H KGSQTTVLAGTMGYMAPECA TGK
Sbjct: 422 EQCVVHRDIKSSNIILDSEFNAKLGDFGLARLVDHGKGSQTTVLAGTMGYMAPECAMTGK 481

Query: 531 ASKESDVYSFGIVALEIACGRKPINPKAP-QGQVSLLQWVWDLYGNGKLLEAVDPRLCRD 589
           AS+ESDVYSFGIVALEIACGRKPINPKA  + +VS++QWVW+LYG GKLLEAVDPRLC D
Sbjct: 482 ASRESDVYSFGIVALEIACGRKPINPKASNEDRVSMVQWVWELYGEGKLLEAVDPRLCGD 541

Query: 590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTYLSPP 645
           F+  Q+ERLMIVGL CAHPDE+LRPSIRQ +HVLNF+APLP LP KMPVP+Y +PP
Sbjct: 542 FNKTQMERLMIVGLSCAHPDEHLRPSIRQALHVLNFDAPLPILPSKMPVPSYFAPP 597

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357476157|ref|XP_003608364.1| Class I heat shock protein [Medicago truncatula] gi|355509419|gb|AES90561.1| Class I heat shock protein [Medicago truncatula]

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/639 (62%), Positives = 484/639 (75%), Gaps = 17/639 (2%)

Query: 17  FFTITISFCLTI-IPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRA 75
           F TI +   L + IP AS+LTFN+TSF P  D +I YE +   ++  IQL  N  + GRA
Sbjct: 10  FLTIFLILNLNLFIPNASSLTFNFTSFDPN-DKSIIYEGSANPASSAIQLTINYGSIGRA 68

Query: 76  TYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFG 135
           TY Q + LW+K T NLTDFT+HF+F IDS+N   Y DG+AFFLAP GSK P    GGS G
Sbjct: 69  TYYQPIHLWNKITNNLTDFTSHFTFTIDSQNRQMYGDGIAFFLAPYGSKKPNATKGGSMG 128

Query: 136 LTKDNEPLNSSI-PFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNE 194
           LT DN+ LNS+  PFVAVEFD+Y N WDP   H GIDINS+ S  NV+W +D+K GR NE
Sbjct: 129 LTLDNQRLNSTDNPFVAVEFDIYRNHWDPPLEHAGIDINSMLSVANVTWLADIKQGRLNE 188

Query: 195 AWISYNSSTHNLSVAFTGFRN--NLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIF 252
           AWI+YN+S+ NLSV FTGF N  + +V Q L   VDLR +LPEFVT GFS ATG   A+ 
Sbjct: 189 AWINYNASSLNLSVLFTGFNNVTSSIVNQHLSSIVDLRLYLPEFVTIGFSAATGNRTAVH 248

Query: 253 SIYSWEFNSSLE--MDDETTN---PVS-NPKRRRKNRTALVVGLSLGGGVLVGGVVLIIW 306
           SI SW+F+S+LE   D+  TN   PV+ +P   +K +T L VGL  GG VL+G V   IW
Sbjct: 249 SISSWDFSSTLEGQQDNNKTNTQDPVTKSPSSNKKAKTGLAVGLGTGGFVLIG-VFGFIW 307

Query: 307 LAGIGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFG 366
           +  + RKR+E  +ED + F EY+ ++F RG GPK++ Y ELA A N+F D+ KLGQGGFG
Sbjct: 308 VF-LWRKRRE--QEDGE-FQEYMGEDFGRGTGPKKYTYAELANAANNFKDEHKLGQGGFG 363

Query: 367 GVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL 426
           GVY+GF ++T SY+A+K VS+ S QGIKE+ASEV IIS+LRHRNLVQL+GWCH++K+LLL
Sbjct: 364 GVYRGFLKDTKSYVAIKSVSEDSHQGIKEFASEVTIISKLRHRNLVQLIGWCHQRKKLLL 423

Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           VYE+MPNGSLD HLFK+ SLL W  RY IA+ LAS LLYL EEWEQCVVHRDIK+SNIML
Sbjct: 424 VYEYMPNGSLDIHLFKKQSLLKWGVRYTIAKGLASALLYLHEEWEQCVVHRDIKASNIML 483

Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALE 546
           DS FNAK+GDFGLAR V+HAKG QTT LAGTMGYMAPECATTG+ASKE+DVYSFGIVALE
Sbjct: 484 DSEFNAKLGDFGLARFVDHAKGGQTTALAGTMGYMAPECATTGRASKETDVYSFGIVALE 543

Query: 547 IACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCA 606
           IACGRKPI   A + ++++++WVW LYG G+++EAVDPRL  D++ +QI+ +MIVGLWCA
Sbjct: 544 IACGRKPI-INAQENEINIVEWVWGLYGRGRIVEAVDPRLDGDYEEEQIKCMMIVGLWCA 602

Query: 607 HPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTYLSPP 645
           HPD N RPSIRQ I VLNFE PLP LP  MPVPTYL  P
Sbjct: 603 HPDPNNRPSIRQAIQVLNFEVPLPNLPSSMPVPTYLDGP 641

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147765964|emb|CAN70210.1| hypothetical protein VITISV_007747 [Vitis vinifera]

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/633 (64%), Positives = 486/633 (76%), Gaps = 28/633 (4%)

Query: 17  FFTITISFCLTIIPLASALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLP-ANRETAGR 74
           F  I+I F L +IP A++L FN+TSFSP Y+DNITYE  AYP  N++IQL  A   + G 
Sbjct: 31  FTMISIFFILLMIPSATSLDFNFTSFSP-YNDNITYEGSAYP-RNQIIQLTQAQSASIGW 88

Query: 75  ATYNQSMRLWDKATGNLTDFTTHFSFVIDSRN-SSYYADGLAFFLAPQGSKIPTNKGGGS 133
           ATY Q + LWDKA+GNLTDFTTHFSFVID++N S  + DG+AFFL P  S+ P    GG 
Sbjct: 89  ATYVQPLHLWDKASGNLTDFTTHFSFVIDTQNRSGSHGDGIAFFLMPADSQKPNVTKGGG 148

Query: 134 FGLTKDNEPLNSSI-PFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRR 192
            GL  D +PLN+++  FVAVEFD+Y N WDP  +H GIDINSV+S +NV WW  + +GR 
Sbjct: 149 LGLASDTQPLNTTVNHFVAVEFDIYKNRWDPNDTHAGIDINSVQSIRNVKWWDSIINGRI 208

Query: 193 NEAWISYNSSTHNLSVAFTGFRNNLVVMQ-GLDYQVDLRQHLPEFVTFGFSMATGVDFAI 251
           N+AWISYNSS+ NLSV FTGFRN+  ++Q  L Y+VDLR +LPE+     +  T      
Sbjct: 209 NDAWISYNSSSKNLSVVFTGFRNDSTILQDNLYYEVDLRLYLPEWADENKTNPT------ 262

Query: 252 FSIYSWEFNSSLEMDDETTNPVSNPKRRRKNRTALVVGLSLGGGVLVGGVVLIIWLAGIG 311
                     S E +  T+NP SNP R+ K +  LVVGL++GG   VG + L+++L    
Sbjct: 263 ----------SPEAETPTSNPNSNPSRKIKVK--LVVGLTVGGCAFVGSLSLVLFLFLKS 310

Query: 312 RKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKG 371
           R+ K  +   +Q     ++D+FE+G GPK+F Y ELA +TN+F ++ KLG+GGFGGVYKG
Sbjct: 311 RRGKVDNPVIDQ---LSMEDDFEKGTGPKKFRYNELASSTNNFAEEGKLGEGGFGGVYKG 367

Query: 372 FFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           F +E +SYIAVKRVS GSKQGIKEY SEVKIISRLRHRNLVQL+GWCHEK++LLLVYEFM
Sbjct: 368 FLKELDSYIAVKRVSSGSKQGIKEYVSEVKIISRLRHRNLVQLIGWCHEKRDLLLVYEFM 427

Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           PNGSL+SHLF E SLLTWE RYKIAQ LAS LLYL E WEQCV+HRDIKSSNIMLDS FN
Sbjct: 428 PNGSLESHLFSERSLLTWEMRYKIAQGLASALLYLHEGWEQCVLHRDIKSSNIMLDSGFN 487

Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
           AK+GDFGLARLV+H KGSQTTVLAGTMGYMAPECATTGKASK+SD+YSFG+VALEIACGR
Sbjct: 488 AKLGDFGLARLVDHGKGSQTTVLAGTMGYMAPECATTGKASKQSDIYSFGVVALEIACGR 547

Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KPIN KA + Q+ +L+WVWDLYG G +LEA DPRLC +FD QQ++ LM VGLWCAHPD N
Sbjct: 548 KPINLKAKEDQIMMLEWVWDLYGKGNILEAADPRLCAEFDAQQMQCLMTVGLWCAHPDRN 607

Query: 612 LRPSIRQVIHVLNFEAPLPALPPKMPVPTYLSP 644
           LRPS+R+VIHVLNFEAPLP LPPKMPVPTY  P
Sbjct: 608 LRPSVREVIHVLNFEAPLPILPPKMPVPTYSIP 640

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519481|ref|XP_003528401.1| PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Glycine max]

 Score =  772 bits (1993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/643 (61%), Positives = 484/643 (75%), Gaps = 27/643 (4%)

Query: 24  FCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRE------TAGRATY 77
           F L IIP AS+L+FN+TSF P  D +I +E +       IQL  N+       + GRATY
Sbjct: 6   FFLLIIPYASSLSFNFTSFDPN-DKSIVFEGSANPVAPTIQLTRNQMDKGMIGSIGRATY 64

Query: 78  NQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLT 137
            Q M+LWDKATGNLTDFTTHFSFVIDS+N S Y DG+AFFLAP GSKIP    G S GLT
Sbjct: 65  YQPMQLWDKATGNLTDFTTHFSFVIDSQNRSKYGDGIAFFLAPAGSKIPNATKGASMGLT 124

Query: 138 KDNEPLNSSI-PFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAW 196
            DN+ LNS+   FVAVEFD+Y N WDP   HVGIDINS++S  NV+W +D+K G+ NEAW
Sbjct: 125 LDNQQLNSTDNSFVAVEFDIYQNGWDPPHEHVGIDINSMRSASNVTWLADIKEGKLNEAW 184

Query: 197 ISYNSSTHNLSVAFTGFRNNL---VVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS 253
           ISYNSS+ NLSV FTGF N+    +  Q L   VDLR HLPE V+FGFS ATG   AI S
Sbjct: 185 ISYNSSSLNLSVVFTGFNNDTDHTIQQQHLSAIVDLRLHLPELVSFGFSAATGNATAIHS 244

Query: 254 IYSWEFNSSLEMDDETT--------NPVSN--PKRRRKNRTALVVGLSLGGGVL-VGGVV 302
           +YSW+F S+L   +  T        +P SN  P +++KN+T L VGLS+GG V  +G + 
Sbjct: 245 LYSWDFTSTLAAQENITKGADPVARSPTSNIAPSQKKKNKTGLAVGLSIGGFVCGLGLIS 304

Query: 303 LIIWLAGIGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQ 362
           +++W     +K K+G EE+   F E++ ++F RG   +++ Y ELA A N F D+QKLGQ
Sbjct: 305 IVLW-----KKWKKGTEEEEHDFEEFMGEDFGRGVETRKYSYAELAQAANGFKDEQKLGQ 359

Query: 363 GGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK 422
           GGFGGVY+G+ ++  S++A+KRVS+ S QGIKE+ASE++ I+RLRHRNLV L+GWCHE+K
Sbjct: 360 GGFGGVYRGYLKDIKSHVAIKRVSEDSDQGIKEFASEIRTINRLRHRNLVHLIGWCHERK 419

Query: 423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS 482
           +LLLVYE+MPNGSLD+HLFK+ SLL W  RY IA+ LAS LLYL EEWEQCVVHRDIKSS
Sbjct: 420 KLLLVYEYMPNGSLDTHLFKKQSLLKWAVRYNIARGLASALLYLHEEWEQCVVHRDIKSS 479

Query: 483 NIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGI 542
           NIMLDS FNAK+GDFGLAR V+HAKG+QTT LAGTMGYMAPECAT G+ASKESDVYS G+
Sbjct: 480 NIMLDSEFNAKLGDFGLARFVDHAKGAQTTALAGTMGYMAPECATLGRASKESDVYSCGV 539

Query: 543 VALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVG 602
           VALEIACGRKPIN KA + +++++QWVW+L+G G++L+A DPRL  DF+ +QI+ LMIVG
Sbjct: 540 VALEIACGRKPINLKAQENEINIVQWVWELFGGGRILDAADPRLEGDFEEEQIKCLMIVG 599

Query: 603 LWCAHPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTYLSPP 645
           LWCAHPD N R SIRQ I VLNFEAPLP LP  +PVPTYL  P
Sbjct: 600 LWCAHPDHNNRASIRQAIQVLNFEAPLPNLPSSLPVPTYLDGP 642

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528003|ref|XP_003532595.1| PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Glycine max]

 Score =  768 bits (1983), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/630 (60%), Positives = 468/630 (74%), Gaps = 23/630 (3%)

Query: 24  FCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRE------TAGRATY 77
           F L IIP AS+L+FN+ SF P  D+ I Y R+       IQL  N+       + GRATY
Sbjct: 6   FFLLIIPYASSLSFNFPSFDPN-DNRIIYNRSANAVAPNIQLTTNQADKGMNGSIGRATY 64

Query: 78  NQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLT 137
            Q M LWDKATG LTDF+T+FSFVI+SR  S Y DG+AFFLAP GS +P +  GG+ GLT
Sbjct: 65  YQPMHLWDKATGTLTDFSTNFSFVINSRGQSVYGDGIAFFLAPAGSMVPNSTLGGTMGLT 124

Query: 138 KDNEPLNSSI-PFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAW 196
            DN+ LNS+  PFVAVEFD++ N WDP   HVGIDINS++S  N +W +D+K G+ N+A 
Sbjct: 125 LDNQILNSTDNPFVAVEFDIFGNDWDPPGEHVGIDINSLRSVANATWLADIKGGKVNQAL 184

Query: 197 ISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYS 256
           ISYNS++ NLSVAFTGF+N   ++  L   VDL+ +LPEFVT GFS ATG   AI ++ S
Sbjct: 185 ISYNSTSLNLSVAFTGFKNGTALLHHLSVIVDLKLYLPEFVTVGFSAATGNLTAIHTLNS 244

Query: 257 WEFNSSLEMDDETTNPVSNPKRRRKNRTALVVGLSLGGGVLVGGVVLIIWLAGIGRKRKE 316
           W+FNS+          +  P +++K++ AL VGL +GG VL+ G+ LI       R  K+
Sbjct: 245 WDFNST---------SIIAPSQKKKDKKALAVGLGVGGFVLIAGLGLISI-----RLWKK 290

Query: 317 GDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRET 376
             EE++  F EYID++FERGAGP+++ Y ELA A N F D+ KLGQGGFGGVYKG+ ++ 
Sbjct: 291 TSEEEDHDFEEYIDEDFERGAGPQKYSYAELAQAANGFKDEHKLGQGGFGGVYKGYLKDL 350

Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
            S++A+K+VS+GS QGIKE+ASEV+IISRLRHRNLV L+GWCH  K+LLLVYE+M NGSL
Sbjct: 351 KSHVAIKKVSEGSDQGIKEFASEVRIISRLRHRNLVNLIGWCHAGKKLLLVYEYMSNGSL 410

Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
           D HLFK+ S+L W  RY IA+ LAS LLYL EEWEQCVVHRDIK SNIMLDS FNAK+GD
Sbjct: 411 DIHLFKKQSILQWAVRYNIARGLASALLYLHEEWEQCVVHRDIKPSNIMLDSEFNAKLGD 470

Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGRKPIN 555
           FGLAR V+HAK +QTT LAGTMGYMAPEC    + ASKESDVYSFG+VALEIACGRKPIN
Sbjct: 471 FGLARFVDHAKSAQTTALAGTMGYMAPECTLGYRPASKESDVYSFGVVALEIACGRKPIN 530

Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPS 615
            +A + ++S++QWVW LYG G++LEA D RL   F+ +QI+ LMIVGLWCAHPD + RPS
Sbjct: 531 HRAQENEISIVQWVWGLYGEGRILEAADQRLEGKFEEEQIKCLMIVGLWCAHPDHSNRPS 590

Query: 616 IRQVIHVLNFEAPLPALPPKMPVPTYLSPP 645
           IRQ I VLNFEAPLP LP  +PVPTYL  P
Sbjct: 591 IRQAIQVLNFEAPLPNLPSSLPVPTYLEHP 620

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	645
TAIR|locus:2142499	651	AT5G10530 [Arabidopsis thalian	0.941	0.932	0.444	9.3e-130
TAIR|locus:2155685	675	AT5G65600 [Arabidopsis thalian	0.962	0.92	0.423	2.2e-121
TAIR|locus:2162212	681	AT5G55830 [Arabidopsis thalian	0.446	0.422	0.515	9.9e-95
TAIR|locus:2083986	715	AT3G53380 [Arabidopsis thalian	0.441	0.398	0.491	8.9e-92
TAIR|locus:2143528	711	AT5G03140 [Arabidopsis thalian	0.455	0.413	0.460	1e-88
TAIR|locus:2099941	684	AT3G55550 [Arabidopsis thalian	0.908	0.856	0.344	2.4e-85
TAIR|locus:2084375	677	AT3G53810 [Arabidopsis thalian	0.928	0.884	0.338	3.8e-85
TAIR|locus:2020608	666	AT1G70110 [Arabidopsis thalian	0.460	0.445	0.448	1.3e-84
TAIR|locus:2133229	674	LPK1 "lectin-like protein kina	0.462	0.442	0.438	4.5e-82
TAIR|locus:2040681	675	RLK "receptor lectin kinase" [	0.928	0.887	0.330	7.4e-82

TAIR|locus:2142499 AT5G10530 [Arabidopsis thaliana (taxid:3702)]

 Score = 1273 (453.2 bits), Expect = 9.3e-130, P = 9.3e-130
 Identities = 282/635 (44%), Positives = 371/635 (58%)

Query:    20 ITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRET--AGRATY 77
             +  SF L ++P   ++ FN + F     + I Y+     +N  ++L     T  AG ATY
Sbjct:     6 LLFSFVL-VLPFVCSVQFNISRFGSDVSE-IAYQ-GDARANGAVELTNIDYTCRAGWATY 62

Query:    78 NQSMRLWDKATGNLTDFTTHFSFVIDSRNSSY--YADGLAFFLAPQGSKIPTNKGGGSFG 135
              + + LW+  T   +DF+T FSF ID+RN  Y  Y  G AFFLAP   ++P N  GG  G
Sbjct:    63 GKQVPLWNPGTSKPSDFSTRFSFRIDTRNVGYGNYGHGFAFFLAPARIQLPPNSAGGFLG 122

Query:   136 LTKDNEPLNSSIPFVAVEFDVYVN-SWDP--TFSHVGIDIXXXXXXXXXXXXXXXXXGRR 192
             L       +S+ P V VEFD + N  WDP    SHVGI+                     
Sbjct:   123 LFNGTNNQSSAFPLVYVEFDTFTNPEWDPLDVKSHVGINNNSLVSSNYTSWNATSHNQDI 182

Query:   193 NEAWISYNSSTHNLSVAFT-GFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAI 251
                 I Y+S+  NLSV++T    ++ +    L Y +DL + LP  VT GFS  +G     
Sbjct:   183 GRVLIFYDSARRNLSVSWTYDLTSDPLENSSLSYIIDLSKVLPSEVTIGFSATSGGVTEG 242

Query:   252 FSIYSWEFNSSLEMDDETTNPVSNPKRRRKNRTAXXXXXXXXXXXXXXXXXXXXXXXXXX 311
               + SWEF+SSLE+ D          ++ +N                             
Sbjct:   243 NRLLSWEFSSSLELIDI---------KKSQNDKKGMIIGISVSGFVLLTFFITSLIVFLK 293

Query:   312 RKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLXXXXXXXXXXX 371
             RK+++   E+ +  +  I+++ ERGAGP++F YK+LA A N+F DD+KL           
Sbjct:   294 RKQQKKKAEETENLTS-INEDLERGAGPRKFTYKDLASAANNFADDRKLGEGGFGAVYRG 352

Query:   372 XXRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
                  +  +A+K+ + GSKQG +E+ +EVKIIS LRHRNLVQL+GWCHEK E L++YEFM
Sbjct:   353 YLNSLDMMVAIKKFAGGSKQGKREFVTEVKIISSLRHRNLVQLIGWCHEKDEFLMIYEFM 412

Query:   432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
             PNGSLD+HLF +   L W  R KI   LAS LLYL EEWEQCVVHRDIK+SN+MLDSNFN
Sbjct:   413 PNGSLDAHLFGKKPHLAWHVRCKITLGLASALLYLHEEWEQCVVHRDIKASNVMLDSNFN 472

Query:   492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
             AK+GDFGLARL++H  G QTT LAGT GYMAPE  +TG+ASKESDVYSFG+V LEI  GR
Sbjct:   473 AKLGDFGLARLMDHELGPQTTGLAGTFGYMAPEYISTGRASKESDVYSFGVVTLEIVTGR 532

Query:   552 KPINPKAPQGQV----SLLQWVWDLYGNGKLLEAVDPRL-CRDFDGQQIERLMIVGLWCA 606
             K ++ +  QG+V    +L++ +WDLYG G+++ A+D +L    FD +Q E LMIVGLWCA
Sbjct:   533 KSVDRR--QGRVEPVTNLVEKMWDLYGKGEVITAIDEKLRIGGFDEKQAECLMIVGLWCA 590

Query:   607 HPDENLRPSIRQVIHVLNFEXXXXXXXXKMPVPTY 641
             HPD N RPSI+Q I VLN E        KMPV TY
Sbjct:   591 HPDVNTRPSIKQAIQVLNLEAPVPHLPTKMPVATY 625

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2155685 AT5G65600 [Arabidopsis thaliana (taxid:3702)]

 Score = 1194 (425.4 bits), Expect = 2.2e-121, P = 2.2e-121
 Identities = 278/657 (42%), Positives = 367/657 (55%)

Query:     4 CNTCSSNSPLLLSFFTITISFCLTIIPLASALTFNYTSFSPQYDDNITYER-AYPDSNRV 62
             C   SS+S +  S   +++   L  +    +L FN+TSF      +I Y   A PD +  
Sbjct:     7 CQNLSSSSSMSNSILFLSLFLFLPFV--VDSLYFNFTSFRQGDPGDIFYHGDATPDEDGT 64

Query:    63 IQLPANRETA--GRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAP 120
             +      +T+  G  TY++ + +W   TG  +DF+T FSF ID+RN S    G+ FFLAP
Sbjct:    65 VNFNNAEQTSQVGWITYSKKVPIWSHKTGKASDFSTSFSFKIDARNLSADGHGICFFLAP 124

Query:   121 QGSKIPTNKGGGSFGL-TKDNEPLNSSIPFVAVEFDVYVN-SWDPTF--SHVGIDIXXXX 176
              G+++P    GG   L T+ N   +SS P V VEFD + N  WDP    SHVGI+     
Sbjct:   125 MGAQLPAYSVGGFLNLFTRKNN-YSSSFPLVHVEFDTFNNPGWDPNDVGSHVGINNNSLV 183

Query:   177 XXXXXXXXXXXXXGRRNEAWISYNSSTHNLSVAFT---GFRNNLVVMQGLDYQVDLRQHL 233
                               A ISY+S T NLSV +       ++      L Y +DL + L
Sbjct:   184 SSNYTSWNASSHSQDICHAKISYDSVTKNLSVTWAYELTATSDPKESSSLSYIIDLAKVL 243

Query:   234 PEFVTFGFSMATGVDFAIFSIYSWEFNSSLEMDDETTNPVSNPKRRRKNRTAXXXXXXXX 293
             P  V FGF  A G +     + SWE +SSL+ D          K   +            
Sbjct:   244 PSDVMFGFIAAAGTNTEEHRLLSWELSSSLDSD----------KADSRIGLVIGISASGF 293

Query:   294 XXXXXXXXXXXXXXXXXXRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATND 353
                               RK+KE D E+       I+ + ER AGP++F YK+L  ATN 
Sbjct:   294 VFLTFMVITTVVVWSRKQRKKKERDIENMIS----INKDLEREAGPRKFSYKDLVSATNR 349

Query:   354 FNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQ 413
             F+  +KL             +E N+ +AVK++S  S+QG  E+ +EVKIIS+LRHRNLVQ
Sbjct:   350 FSSHRKLGEGGFGAVYEGNLKEINTMVAVKKLSGDSRQGKNEFLNEVKIISKLRHRNLVQ 409

Query:   414 LLGWCHEKKELLLVYEFMPNGSLDSHLF-KENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
             L+GWC+EK E LL+YE +PNGSL+SHLF K  +LL+W+ RYKI   LAS LLYL EEW+Q
Sbjct:   410 LIGWCNEKNEFLLIYELVPNGSLNSHLFGKRPNLLSWDIRYKIGLGLASALLYLHEEWDQ 469

Query:   473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKAS 532
             CV+HRDIK+SNIMLDS FN K+GDFGLARL+ H  GS TT LAGT GYMAPE    G AS
Sbjct:   470 CVLHRDIKASNIMLDSEFNVKLGDFGLARLMNHELGSHTTGLAGTFGYMAPEYVMKGSAS 529

Query:   533 KESDVYSFGIVALEIACGRKPI-------NPKAPQGQVSLLQWVWDLYGNGKLLEA-VDP 584
             KESD+YSFGIV LEI  GRK +       +      + SL++ VW+LYG  +L+ + VD 
Sbjct:   530 KESDIYSFGIVLLEIVTGRKSLERTQEDNSDTESDDEKSLVEKVWELYGKQELITSCVDD 589

Query:   585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEXXXXXXXXKMPVPTY 641
             +L  DFD ++ E L+++GLWCAHPD+N RPSI+Q I V+NFE        K PV  Y
Sbjct:   590 KLGEDFDKKEAECLLVLGLWCAHPDKNSRPSIKQGIQVMNFESPLPDLPLKRPVAMY 646

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009723 "response to ethylene stimulus" evidence=RCA

TAIR|locus:2162212 AT5G55830 [Arabidopsis thaliana (taxid:3702)]

 Score = 751 (269.4 bits), Expect = 9.9e-95, Sum P(2) = 9.9e-95
 Identities = 152/295 (51%), Positives = 201/295 (68%)

Query:   338 GPKRFPYKELALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIKEYA 397
             G + F YKEL  AT  F+  + +               + +  AVKR    S +G  E+ 
Sbjct:   349 GLREFSYKELYTATKGFHSSRVIGRGAFGNVYRAMFVSSGTISAVKRSRHNSTEGKTEFL 408

Query:   398 SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSL----LTWEFRY 453
             +E+ II+ LRH+NLVQL GWC+EK ELLLVYEFMPNGSLD  L++E+      L W  R 
Sbjct:   409 AELSIIACLRHKNLVQLQGWCNEKGELLLVYEFMPNGSLDKILYQESQTGAVALDWSHRL 468

Query:   454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
              IA  LAS L YL  E EQ VVHRDIK+SNIMLD NFNA++GDFGLARL EH K   +T+
Sbjct:   469 NIAIGLASALSYLHHECEQQVVHRDIKTSNIMLDINFNARLGDFGLARLTEHDKSPVSTL 528

Query:   514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ--VSLLQWVWD 571
              AGTMGY+APE    G A++++D +S+G+V LE+ACGR+PI+ K P+ Q  V+L+ WVW 
Sbjct:   529 TAGTMGYLAPEYLQYGTATEKTDAFSYGVVILEVACGRRPID-KEPESQKTVNLVDWVWR 587

Query:   572 LYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE 626
             L+  G++LEAVD RL  +FD + +++L++VGL CAHPD N RPS+R+V+ +LN E
Sbjct:   588 LHSEGRVLEAVDERLKGEFDEEMMKKLLLVGLKCAHPDSNERPSMRRVLQILNNE 642

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

TAIR|locus:2083986 AT3G53380 [Arabidopsis thaliana (taxid:3702)]

 Score = 718 (257.8 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
 Identities = 143/291 (49%), Positives = 187/291 (64%)

Query:   339 PKRFPYKELALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIKEYAS 398
             PK F YKEL   T +FN+ + +              ET   +AVKR S  S+    E+ S
Sbjct:   361 PKEFSYKELKAGTKNFNESRIIGHGAFGVVYRGILPETGDIVAVKRCSHSSQDKKNEFLS 420

Query:   399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
             E+ II  LRHRNLV+L GWCHEK E+LLVY+ MPNGSLD  LF+    L W+ R KI   
Sbjct:   421 ELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFESRFTLPWDHRKKILLG 480

Query:   459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM 518
             +AS L YL  E E  V+HRD+KSSNIMLD +FNAK+GDFGLAR +EH K  + TV AGTM
Sbjct:   481 VASALAYLHRECENQVIHRDVKSSNIMLDESFNAKLGDFGLARQIEHDKSPEATVAAGTM 540

Query:   519 GYMAPECATTGKASKESDVYSFGIVALEIACGRKPINP--KAPQGQV----SLLQWVWDL 572
             GY+APE   TG+AS+++DV+S+G V LE+  GR+PI       +  V    +L++WVW L
Sbjct:   541 GYLAPEYLLTGRASEKTDVFSYGAVVLEVVSGRRPIEKDLNVQRHNVGVNPNLVEWVWGL 600

Query:   573 YGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
             Y  GK+  A D RL   FD  ++ R+++VGL C+HPD   RP++R V+ +L
Sbjct:   601 YKEGKVSAAADSRLEGKFDEGEMWRVLVVGLACSHPDPAFRPTMRSVVQML 651

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2143528 AT5G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 687 (246.9 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
 Identities = 140/304 (46%), Positives = 196/304 (64%)

Query:   326 SEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRV 385
             SE +  E  +   P+ F YKEL LAT+ F+  + +             +++   IA+KR 
Sbjct:   348 SESLASEIMKS--PREFTYKELKLATDCFSSSRVIGNGAFGTVYKGILQDSGEIIAIKRC 405

Query:   386 SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENS 445
             S  S QG  E+ SE+ +I  LRHRNL++L G+C EK E+LL+Y+ MPNGSLD  L++  +
Sbjct:   406 SHIS-QGNTEFLSELSLIGTLRHRNLLRLQGYCREKGEILLIYDLMPNGSLDKALYESPT 464

Query:   446 LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH 505
              L W  R KI   +AS L YL +E E  ++HRD+K+SNIMLD+NFN K+GDFGLAR  EH
Sbjct:   465 TLPWPHRRKILLGVASALAYLHQECENQIIHRDVKTSNIMLDANFNPKLGDFGLARQTEH 524

Query:   506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQ-G--- 561
              K    T  AGTMGY+APE   TG+A++++DV+S+G V LE+  GR+PI    P+ G   
Sbjct:   525 DKSPDATAAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVCTGRRPITRPEPEPGLRP 584

Query:   562 --QVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQV 619
               + SL+ WVW LY  GKLL AVD RL  +F+ +++ R+M+VGL C+ PD   RP++R V
Sbjct:   585 GLRSSLVDWVWGLYREGKLLTAVDERLS-EFNPEEMSRVMMVGLACSQPDPVTRPTMRSV 643

Query:   620 IHVL 623
             + +L
Sbjct:   644 VQIL 647

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2099941 AT3G55550 [Arabidopsis thaliana (taxid:3702)]

 Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
 Identities = 218/633 (34%), Positives = 318/633 (50%)

Query:    18 FTITISFCLTIIPLASALT--FNYTSFSPQYDDNITYER-AYPDSNRVIQLPANRETA-G 73
             F + +   + +  L S+L   F++  F  +   N+T    A       I+L    +   G
Sbjct:     5 FAVILLLLIFLTHLVSSLIQDFSFIGFK-KASPNLTLNGVAEIAPTGAIRLTTETQRVIG 63

Query:    74 RATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAP----QGSKIPTNK 129
              A Y+  +R           F+T F+  +     +    GLAF + P    +GS +P+  
Sbjct:    64 HAFYSLPIRFKPIGVNRALSFSTSFAIAMVPEFVTLGGHGLAFAITPTPDLRGS-LPSQY 122

Query:   130 GGGSFGLTKDNEPLNSSIPFVAVEFDVY--VNSWDPTFSHVGIDIXXXXXXXXXXXXXXX 187
                  GL   +  +N S  F AVEFD    +   D   +HVGIDI               
Sbjct:   123 ----LGLLNSSR-VNFSSHFFAVEFDTVRDLEFEDINDNHVGIDINSMESSISTPAGYFL 177

Query:   188 XX----------GRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFV 237
                         GR  +AWI Y+S+   L V  + F      +  L Y VDL   L + +
Sbjct:   178 ANSTKKELFLDGGRVIQAWIDYDSNKKRLDVKLSPFSEK-PKLSLLSYDVDLSSVLGDEM 236

Query:   238 TFGFSMATGVDFAIFSIYSWEFNSS-----LEMDDETTNPVSNPKRRRKNRTAXXXXXXX 292
               GFS +TG+  +   I  W FN S     L +      P S  KR++K ++        
Sbjct:   237 YVGFSASTGLLASSHYILGWNFNMSGEAFSLSLPSLPRIPSSIKKRKKKRQSLILGVSLL 296

Query:   293 XXXXXXXXXXXXXXXXXXXRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATN 352
                                RK K+ D  +          E+E   GP RF Y+EL  ATN
Sbjct:   297 CSLLIFAVLVAASLFVV--RKVKDEDRVE----------EWELDFGPHRFSYRELKKATN 344

Query:   353 DFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLV 412
              F D + L               ++ ++AVKR+S  S+QG++E+ SEV  I  LRHRNLV
Sbjct:   345 GFGDKELLGSGGFGKVYKGKLPGSDEFVAVKRISHESRQGVREFMSEVSSIGHLRHRNLV 404

Query:   413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENS--LLTWEFRYKIAQDLASGLLYLQEEW 470
             QLLGWC  + +LLLVY+FMPNGSLD +LF EN   +LTW+ R+KI + +ASGLLYL E W
Sbjct:   405 QLLGWCRRRDDLLLVYDFMPNGSLDMYLFDENPEVILTWKQRFKIIKGVASGLLYLHEGW 464

Query:   471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK 530
             EQ V+HRDIK++N++LDS  N ++GDFGLA+L EH      T + GT GY+APE   +GK
Sbjct:   465 EQTVIHRDIKAANVLLDSEMNGRVGDFGLAKLYEHGSDPGATRVVGTFGYLAPELTKSGK 524

Query:   531 ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF 590
              +  +DVY+FG V LE+ACGR+PI   A   ++ ++ WVW  + +G + + VD RL  +F
Sbjct:   525 LTTSTDVYAFGAVLLEVACGRRPIETSALPEELVMVDWVWSRWQSGDIRDVVDRRLNGEF 584

Query:   591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
             D +++  ++ +GL C++    +RP++RQV+  L
Sbjct:   585 DEEEVVMVIKLGLLCSNNSPEVRPTMRQVVMYL 617

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2084375 AT3G53810 [Arabidopsis thaliana (taxid:3702)]

 Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
 Identities = 212/627 (33%), Positives = 313/627 (49%)

Query:    13 LLLSFFTITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLP-ANRET 71
             L L FF   +  C  +I  +  L F Y  F P   D      A    N +++L   + + 
Sbjct:     5 LKLIFFFFLL--CQIMISSSQNLNFTYNGFHPPLTDISLQGLATVTPNGLLKLTNTSVQK 62

Query:    72 AGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGG 131
              G A   + +R  D   GN++ F+T F F I S+  +    G+AF +AP    +P     
Sbjct:    63 TGHAFCTERIRFKDSQNGNVSSFSTTFVFAIHSQIPTLSGHGIAFVVAPTLG-LPFALPS 121

Query:   132 GSFGLTKDNEPLNSSIPFVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXX---- 185
                GL   +   N +    AVEFD   +S   DP  +HVGID+                 
Sbjct:   122 QYIGLFNISNNGNDTNHIFAVEFDTIQSSEFGDPNDNHVGIDLNGLRSANYSTAGYRDDH 181

Query:   186 ------XXXXGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTF 239
                        +R + WI Y++ +H + V    F ++      + Y  DL   L E +  
Sbjct:   182 DKFQNLSLISRKRIQVWIDYDNRSHRIDVTVAPFDSDKPRKPLVSYVRDLSSILLEDMYV 241

Query:   240 GFSMATGVDFAIFSIYSWEFNSSLEMDDETTNPVSNPKRRRKNRTAXXXXXXXXXXXXXX 299
             GFS ATG   +   +  W F  + E    + + +    R    R +              
Sbjct:   242 GFSSATGSVLSEHFLVGWSFRLNGEAPMLSLSKLPKLPRFEPRRISEFYKIGMPLISLSL 301

Query:   300 XXXXXXXXXXXXRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQK 359
                         R++K+ +EE        +DD +E   G  RF +KEL  AT  F +   
Sbjct:   302 IFSIIFLAFYIVRRKKKYEEE--------LDD-WETEFGKNRFRFKELYHATKGFKEKDL 352

Query:   360 LXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCH 419
             L               T   +AVKRVS  SKQG+KE+ +E+  I R+ HRNLV LLG+C 
Sbjct:   353 LGSGGFGRVYRGILPTTKLEVAVKRVSHDSKQGMKEFVAEIVSIGRMSHRNLVPLLGYCR 412

Query:   420 EKKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
              + ELLLVY++MPNGSLD +L+    + L W+ R  I + +ASGL YL EEWEQ V+HRD
Sbjct:   413 RRGELLLVYDYMPNGSLDKYLYNNPETTLDWKQRSTIIKGVASGLFYLHEEWEQVVIHRD 472

Query:   479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVY 538
             +K+SN++LD++FN ++GDFGLARL +H    QTT + GT+GY+APE + TG+A+  +DVY
Sbjct:   473 VKASNVLLDADFNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEHSRTGRATTTTDVY 532

Query:   539 SFGIVALEIACGRKPIN-PKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL-CRDFDGQQIE 596
             +FG   LE+  GR+PI    A      L++WV+ L+  G ++EA DP+L    +D +++E
Sbjct:   533 AFGAFLLEVVSGRRPIEFHSASDDTFLLVEWVFSLWLRGNIMEAKDPKLGSSGYDLEEVE 592

Query:   597 RLMIVGLWCAHPDENLRPSIRQVIHVL 623
              ++ +GL C+H D   RPS+RQV+  L
Sbjct:   593 MVLKLGLLCSHSDPRARPSMRQVLQYL 619

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009555 "pollen development" evidence=IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2020608 AT1G70110 [Arabidopsis thaliana (taxid:3702)]

 Score = 690 (248.0 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
 Identities = 134/299 (44%), Positives = 200/299 (66%)

Query:   327 EYIDDEFERGAGPKRFPYKELALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVS 386
             E ++D +E   GP RF +K+L +AT  F D + L               +N  IAVK VS
Sbjct:   318 EVLED-WEVQFGPHRFAFKDLHIATKGFKDTEVLGKGGFGKVYKGTLPVSNVEIAVKMVS 376

Query:   387 QGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF-KENS 445
               S+QG++E+ +E+  I RLRH NLV+L G+C  K EL LVY+ M  GSLD  L+ ++  
Sbjct:   377 HDSRQGMREFIAEIATIGRLRHPNLVRLQGYCRHKGELYLVYDCMAKGSLDKFLYHQQTG 436

Query:   446 LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH 505
              L W  R+KI +D+ASGL YL ++W Q ++HRDIK +NI+LD+N NAK+GDFGLA+L +H
Sbjct:   437 NLDWSQRFKIIKDVASGLYYLHQQWVQVIIHRDIKPANILLDANMNAKLGDFGLAKLCDH 496

Query:   506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSL 565
                 QT+ +AGT+GY++PE + TGKAS  SDV++FGIV LEIACGRKPI P+A Q ++ L
Sbjct:   497 GTDPQTSHVAGTLGYISPELSRTGKASTRSDVFAFGIVMLEIACGRKPILPRASQREMVL 556

Query:   566 LQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
               WV + + N  +++ +D ++ +++  +Q   ++ +GL+C+HP   +RP++  VI +L+
Sbjct:   557 TDWVLECWENEDIMQVLDHKIGQEYVEEQAALVLKLGLFCSHPVAAIRPNMSSVIQLLD 615

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2133229 LPK1 "lectin-like protein kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 678 (243.7 bits), Expect = 4.5e-82, Sum P(2) = 4.5e-82
 Identities = 132/301 (43%), Positives = 193/301 (64%)

Query:   325 FSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKR 384
             F+E  +D +E   G  R  +K+L  AT  F D   L               T   IAVKR
Sbjct:   327 FAEEFED-WETEFGKNRLRFKDLYYATKGFKDKDLLGSGGFGRVYRGVMPTTKKEIAVKR 385

Query:   385 VSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK-E 443
             VS  S+QG+KE+ +E+  I R+ HRNLV LLG+C  + ELLLVY++MPNGSLD +L+   
Sbjct:   386 VSNESRQGLKEFVAEIVSIGRMSHRNLVPLLGYCRRRDELLLVYDYMPNGSLDKYLYDCP 445

Query:   444 NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV 503
                L W+ R+ +   +ASGL YL EEWEQ V+HRDIK+SN++LD+ +N ++GDFGLARL 
Sbjct:   446 EVTLDWKQRFNVIIGVASGLFYLHEEWEQVVIHRDIKASNVLLDAEYNGRLGDFGLARLC 505

Query:   504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ- 562
             +H    QTT + GT GY+AP+   TG+A+  +DV++FG++ LE+ACGR+PI  +    + 
Sbjct:   506 DHGSDPQTTRVVGTWGYLAPDHVRTGRATTATDVFAFGVLLLEVACGRRPIEIEIESDES 565

Query:   563 VSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHV 622
             V L+  V+  +  G +L+A DP L   +D +++E ++ +GL C+H D  +RP++RQV+  
Sbjct:   566 VLLVDSVFGFWIEGNILDATDPNLGSVYDQREVETVLKLGLLCSHSDPQVRPTMRQVLQY 625

Query:   623 L 623
             L
Sbjct:   626 L 626

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2040681 RLK "receptor lectin kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
 Identities = 208/630 (33%), Positives = 312/630 (49%)

Query:    13 LLLSFFTITISFCLTIIPLASA--LTFNYTS-FSPQYDDNIT-YERAYPDSNRVIQLPAN 68
             + L   TI   F   +I  +S+  L F Y + F+P  D +I       P  N +++L   
Sbjct:     1 MFLKLLTIFFFFFFNLIFQSSSQSLNFAYNNGFNPPTDLSIQGITTVTP--NGLLKLTNT 58

Query:    69 R-ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPT 127
               +  G A Y + +R  D   G ++ F+T F F I S+ +     G+AF +AP  S +P 
Sbjct:    59 TVQKTGHAFYTKPIRFKDSPNGTVSSFSTSFVFAIHSQIAILSGHGIAFVVAPNAS-LPY 117

Query:   128 NKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSW--DPTFSHVGIDIXXXXXXXXXXXXX 185
                    GL       N +    AVE D  +++   D   +HVGIDI             
Sbjct:   118 GNPSQYIGLFNLANNGNETNHVFAVELDTILSTEFNDTNDNHVGIDINSLKSVQSSPAGY 177

Query:   186 XXXXGR-RN---------EAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPE 235
                 G+ +N         + W+ Y+  T+ + V    F  +      +    DL   L +
Sbjct:   178 WDEKGQFKNLTLISRKPMQVWVDYDGRTNKIDVTMAPFNEDKPTRPLVTAVRDLSSVLLQ 237

Query:   236 FVTFGFSMATGVDFAIFSIYSWEFNSSLEMDDETTNPVSNPKRRRKNRTAXXXXXXXXXX 295
              +  GFS ATG   +   I  W F  + +      + +    R    R +          
Sbjct:   238 DMYVGFSSATGSVLSEHYILGWSFGLNEKAPPLALSRLPKLPRFEPKRISEFYKIGMPLI 297

Query:   296 XXXXXXXXXXXXXXXXRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFN 355
                             R+R++        F+E ++ E+E+  G  RF +K+L  AT  F 
Sbjct:   298 SLFLIFSFIFLVCYIVRRRRK--------FAEELE-EWEKEFGKNRFRFKDLYYATKGFK 348

Query:   356 DDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLL 415
             +   L               T   IAVKRVS  S+QG+KE+ +E+  I R+ HRNLV LL
Sbjct:   349 EKGLLGTGGFGSVYKGVMPGTKLEIAVKRVSHESRQGMKEFVAEIVSIGRMSHRNLVPLL 408

Query:   416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCV 474
             G+C  + ELLLVY++MPNGSLD +L+    + L W+ R K+   +ASGL YL EEWEQ V
Sbjct:   409 GYCRRRGELLLVYDYMPNGSLDKYLYNTPEVTLNWKQRIKVILGVASGLFYLHEEWEQVV 468

Query:   475 VHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKE 534
             +HRD+K+SN++LD   N ++GDFGLARL +H    QTT + GT+GY+APE   TG+A+  
Sbjct:   469 IHRDVKASNVLLDGELNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEHTRTGRATMA 528

Query:   535 SDVYSFGIVALEIACGRKPINPKAPQGQVSLL-QWVWDLYGNGKLLEAVDPRLCRDFDGQ 593
             +DV++FG   LE+ACGR+PI  +    +  LL  WV+ L+  G +L A DP +  + D +
Sbjct:   529 TDVFAFGAFLLEVACGRRPIEFQQETDETFLLVDWVFGLWNKGDILAAKDPNMGSECDEK 588

Query:   594 QIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
             ++E ++ +GL C+H D   RPS+RQV+H L
Sbjct:   589 EVEMVLKLGLLCSHSDPRARPSMRQVLHYL 618

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LXA5	LRK91_ARATH	2, ., 7, ., 1, 1, ., 1	0.4799	0.9441	0.9354	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.914
3rd Layer	2.7.11	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	645
cd06899	236	cd06899, lectin_legume_LecRK_Arcelin_ConA, legume	5e-75
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	9e-57
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	8e-56
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-54
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-52
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-52
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	4e-52
pfam00139	231	pfam00139, Lectin_legB, Legume lectin domain	3e-51
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-50
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	6e-49
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-41
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-34
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-34
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	4e-34
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-33
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	4e-33
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-33
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	8e-33
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	1e-32
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	7e-32
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-31
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-31
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-31
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	8e-31
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-30
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	8e-30
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	8e-30
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-29
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	2e-29
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-29
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-29
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	3e-29
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	4e-29
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-29
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-28
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	3e-28
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	6e-28
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	7e-28
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-27
cd01951	223	cd01951, lectin_L-type, legume lectins	4e-27
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	5e-27
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	6e-27
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-26
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-26
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	3e-26
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-26
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	5e-26
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-25
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	2e-25
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	2e-25
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	3e-25
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	4e-25
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	5e-25
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	5e-25
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	1e-24
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-24
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-24
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-24
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	3e-24
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	3e-24
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	4e-24
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	6e-24
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	9e-24
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	1e-23
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-23
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	2e-23
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-23
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	7e-23
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	7e-23
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	7e-23
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	7e-23
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	8e-23
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	9e-23
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-22
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-22
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	2e-22
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-22
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	4e-22
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	5e-22
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	5e-22
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	5e-22
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	7e-22
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-21
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-21
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	1e-21
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	3e-21
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	3e-21
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	4e-21
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	5e-21
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	5e-21
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	6e-21
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	7e-21
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-20
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-20
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-20
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	2e-20
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	3e-20
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	3e-20
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	4e-20
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	5e-20
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	5e-20
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	5e-20
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	9e-20
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	9e-20
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	9e-20
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-19
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-19
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-19
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	1e-19
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	1e-19
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	2e-19
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	2e-19
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	2e-19
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	2e-19
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	2e-19
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-19
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	3e-19
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	3e-19
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	3e-19
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	3e-19
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	5e-19
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	6e-19
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	8e-19
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	8e-19
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-18
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	1e-18
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	1e-18
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-18
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	1e-18
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	1e-18
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	1e-18
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-18
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	2e-18
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-18
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	2e-18
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-18
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-18
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	3e-18
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-18
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	3e-18
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	3e-18
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	4e-18
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	5e-18
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	5e-18
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	6e-18
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	6e-18
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	6e-18
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	8e-18
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	9e-18
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	1e-17
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	1e-17
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	1e-17
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	1e-17
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	2e-17
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	2e-17
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	3e-17
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	3e-17
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	3e-17
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	3e-17
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	3e-17
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	5e-17
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	5e-17
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	5e-17
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	7e-17
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-16
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	1e-16
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	1e-16
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-16
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	1e-16
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-16
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-16
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	3e-16
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	3e-16
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	3e-16
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	3e-16
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	3e-16
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	3e-16
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-16
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	4e-16
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	6e-16
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	6e-16
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	6e-16
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	8e-16
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	9e-16
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	9e-16
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-15
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-15
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	1e-15
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-15
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	1e-15
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	2e-15
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-15
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-15
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	3e-15
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	3e-15
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	3e-15
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	3e-15
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	4e-15
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	5e-15
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	5e-15
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	6e-15
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	7e-15
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	8e-15
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	8e-15
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	1e-14
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-14
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	2e-14
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	3e-14
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	4e-14
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	4e-14
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	5e-14
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	6e-14
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	6e-14
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	7e-14
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	8e-14
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-13
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-13
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	1e-13
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-13
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-13
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	2e-13
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	3e-13
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	3e-13
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	3e-13
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	4e-13
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	4e-13
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	5e-13
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	5e-13
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	6e-13
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	7e-13
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	1e-12
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	1e-12
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	1e-12
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	1e-12
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	2e-12
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-12
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	2e-12
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	3e-12
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	4e-12
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	4e-12
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	5e-12
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	6e-12
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	7e-12
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	7e-12
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	8e-12
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	1e-11
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-11
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	2e-11
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	2e-11
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	4e-11
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	4e-11
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	7e-11
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	8e-11
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	9e-11
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	1e-10
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	1e-10
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-10
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	3e-10
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	4e-10
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	5e-10
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	7e-10
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	1e-09
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	1e-09
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	2e-09
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	2e-09
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	3e-09
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	3e-09
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	4e-09
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	4e-09
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	4e-09
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	6e-09
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	6e-09
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-08
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	3e-08
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	3e-08
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	3e-08
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	6e-08
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	6e-08
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	8e-08
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	9e-08
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-07
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	2e-07
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	3e-07
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	3e-07
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	6e-07
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	7e-07
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	8e-07
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	1e-06
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	1e-06
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	1e-06
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-06
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	2e-06
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-06
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	3e-06
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	3e-06
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	4e-06
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	4e-06
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	4e-06
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	5e-06
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	5e-06
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	7e-06
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	9e-06
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	2e-04
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	2e-04
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	3e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	0.001
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	0.002

>gnl|CDD|173887 cd06899, lectin_legume_LecRK_Arcelin_ConA, legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor

 Score =  239 bits (613), Expect = 5e-75
 Identities = 99/238 (41%), Positives = 127/238 (53%), Gaps = 11/238 (4%)

Query: 35  LTFNYTSFSPQYDDNITYER-AYPDSNRVIQLPANRE---TAGRATYNQSMRLWDKATGN 90
           L+FN+  FS     N+T +  A   SN  +QL  +     + GRA Y++ +RLWD  TG 
Sbjct: 1   LSFNFNGFSS-DQSNLTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDSTTGK 59

Query: 91  LTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFV 150
           +  F+T FSF I   N S   DGLAFFLAP  S  P    GG  GL   +   NSS   V
Sbjct: 60  VASFSTSFSFSITPPNPSLGGDGLAFFLAPTDSLPP-ASSGGYLGLFNSSNNGNSSNHIV 118

Query: 151 AVEFDVYVNSW--DPTFSHVGIDINSVKSKKNVSWWSD---VKSGRRNEAWISYNSSTHN 205
           AVEFD + N    DP  +HVGID+NS+ S K   W  D   +KSG+  +AWI Y+SS+  
Sbjct: 119 AVEFDTFQNPEFGDPDDNHVGIDVNSLVSVKAGYWDDDGGKLKSGKPMQAWIDYDSSSKR 178

Query: 206 LSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSL 263
           LSV              L Y VDL + LPE V  GFS +TG+   +  I SW F+S+ 
Sbjct: 179 LSVTLAYSGVAKPKKPLLSYPVDLSKVLPEEVYVGFSASTGLLTELHYILSWSFSSNG 236

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by binding glycans on the cell surface. Medically, PHA is used as a mitogen to trigger cell division in T-lymphocytes and to activate latent HIV-1 from human peripheral lymphocytes. Plant L-type lectins are primarily found in the seeds of leguminous plants where they constitute about 10% of the total soluble protein of the seed extracts. They are synthesized during seed development several weeks after flowering and transported to the vacuole where they become condensed into specialized vesicles called protein bodies. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 236

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  190 bits (486), Expect = 9e-57
 Identities = 65/191 (34%), Positives = 103/191 (53%), Gaps = 7/191 (3%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLVQLLGWC 418
           LG+GGFG VY    ++T   +A+K + +     + E    E++I+ +L H N+V+L G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
            ++  L LV E+   GSL   L +    L+ +   +I   +  GL YL       ++HRD
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLH---SNGIIHRD 117

Query: 479 IKSSNIMLDS-NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT-TGKASKESD 536
           +K  NI+LDS N   K+ DFGL++L+     S    + GT  YMAPE     G  S++SD
Sbjct: 118 LKPENILLDSDNGKVKLADFGLSKLLTS-DKSLLKTIVGTPAYMAPEVLLGKGYYSEKSD 176

Query: 537 VYSFGIVALEI 547
           ++S G++  E+
Sbjct: 177 IWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  189 bits (483), Expect = 8e-56
 Identities = 67/201 (33%), Positives = 107/201 (53%), Gaps = 7/201 (3%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLV 412
           +   +KLG+G FG VY    ++T   +A+K + +   +  +E    E+KI+ +L+H N+V
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
           +L     ++ +L LV E+   G L   L K   L   E R+   + + S L YL     +
Sbjct: 61  RLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARF-YLRQILSALEYLHS---K 116

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKAS 532
            +VHRD+K  NI+LD + + K+ DFGLAR ++   G + T   GT  YMAPE        
Sbjct: 117 GIVHRDLKPENILLDEDGHVKLADFGLARQLDP--GEKLTTFVGTPEYMAPEVLLGKGYG 174

Query: 533 KESDVYSFGIVALEIACGRKP 553
           K  D++S G++  E+  G+ P
Sbjct: 175 KAVDIWSLGVILYELLTGKPP 195

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  185 bits (473), Expect = 2e-54
 Identities = 77/282 (27%), Positives = 120/282 (42%), Gaps = 40/282 (14%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHRNL 411
           +   +KLG G FG VYK   + T   +AVK +       +  +    E++I+ RL H N+
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           V+L+    +K  L LV E+   G L  +L +   L   E + KIA  +  GL YL     
Sbjct: 61  VRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAK-KIALQILRGLEYLHSNG- 118

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE-CATTGK 530
             ++HRD+K  NI+LD N   KI DFGLA+ +     S  T   GT  YMAPE       
Sbjct: 119 --IIHRDLKPENILLDENGVVKIADFGLAKKL-LKSSSSLTTFVGTPWYMAPEVLLGGNG 175

Query: 531 ASKESDVYSFGIVALEIACGRKP-----------INPKAPQGQVSLLQWVWDLYGNGKLL 579
              + DV+S G++  E+  G+ P           +  +     +   +  W         
Sbjct: 176 YGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSS------- 228

Query: 580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIH 621
                   +D     I+        C + D + RP+  +++ 
Sbjct: 229 ---GSEEAKDL----IK-------KCLNKDPSKRPTAEEILQ 256

Length = 260

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  181 bits (461), Expect = 2e-52
 Identities = 86/276 (31%), Positives = 136/276 (49%), Gaps = 31/276 (11%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSY----IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNL 411
            +KLG+G FG VYKG  +         +AVK + +  S+Q I+E+  E +I+ +L H N+
Sbjct: 4   GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNV 63

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           V+LLG C E++ L +V E+M  G L S+L K    L+       A  +A G+ YL+    
Sbjct: 64  VKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLE---S 120

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG---YMAPECATT 528
           +  +HRD+ + N ++  N   KI DFGL+R +            G      +MAPE    
Sbjct: 121 KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD---DDYYRKRGGKLPIRWMAPESLKE 177

Query: 529 GKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC 587
           GK + +SDV+SFG++  EI   G +P    + +    +L+++     NG  L    P  C
Sbjct: 178 GKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNE---EVLEYL----KNGYRLPQ--PPNC 228

Query: 588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
                  +  LM   L C   D   RP+  +++ +L
Sbjct: 229 PPE----LYDLM---LQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  181 bits (461), Expect = 2e-52
 Identities = 84/277 (30%), Positives = 136/277 (49%), Gaps = 32/277 (11%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSY----IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNL 411
            +KLG+G FG VYKG  +         +AVK + +  S+Q I+E+  E +I+ +L H N+
Sbjct: 4   GKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNI 63

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHL-FKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           V+LLG C E++ L++V E+MP G L  +L       L+       A  +A G+ YL+   
Sbjct: 64  VKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE--- 120

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG---YMAPECAT 527
            +  +HRD+ + N ++  N   KI DFGL+R +          + G      +MAPE   
Sbjct: 121 SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD---DDYYKVKGGKLPIRWMAPESLK 177

Query: 528 TGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL 586
            GK + +SDV+SFG++  EI   G +P    +      +L+++      G  L    P  
Sbjct: 178 EGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNA---EVLEYL----KKGYRLPK--PPN 228

Query: 587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
           C       + +LM   L C   D   RP+  +++ +L
Sbjct: 229 CPPE----LYKLM---LQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  180 bits (458), Expect = 4e-52
 Identities = 86/276 (31%), Positives = 136/276 (49%), Gaps = 30/276 (10%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSY----IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNL 411
            +KLG+G FG VYKG  +         +AVK + +G S++  +E+  E  I+ +L H N+
Sbjct: 4   GKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNI 63

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           V+LLG C + + L +V E+MP G L   L K    LT +   ++A  +A G+ YL+    
Sbjct: 64  VRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLE---S 120

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG---YMAPECATT 528
           +  VHRD+ + N ++  N   KI DFGL+R +   +        G      +MAPE    
Sbjct: 121 KNFVHRDLAARNCLVTENLVVKISDFGLSRDIY--EDDYYRKRGGGKLPIKWMAPESLKD 178

Query: 529 GKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC 587
           GK + +SDV+SFG++  EI   G +P    + +  + LL+       +G  L    P  C
Sbjct: 179 GKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLE-------DGYRLPR--PENC 229

Query: 588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
                 ++  LM   L C   D   RP+  +++  L
Sbjct: 230 ----PDELYELM---LQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|215744 pfam00139, Lectin_legB, Legume lectin domain

 Score =  176 bits (449), Expect = 3e-51
 Identities = 91/243 (37%), Positives = 121/243 (49%), Gaps = 27/243 (11%)

Query: 33  SALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL-PANRETAGRATYNQSMRLWDKATGN 90
           S ++FNY  FS     N+T +  A    N ++QL      +AGRA Y++ +RLWD +TG 
Sbjct: 1   STVSFNYNGFSNV--SNLTLQGDATVLPNGLLQLTNVTNNSAGRALYSKPIRLWDSSTGK 58

Query: 91  LTDFTTHFSFVIDSRNSSY-YADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPF 149
           +  F+T F F I +   S    DGLAFFLAP G+  P    GG  GL   +   NSS   
Sbjct: 59  VASFSTSFVFAIKNIPKSTNGGDGLAFFLAPSGT-QPGASSGGYLGLFNSSNNGNSSNHI 117

Query: 150 VAVEFDVY----VNSWDPTFSHVGIDINSVKSKK-----NVSWWSDVKSGRRNEAWISYN 200
           VAVEFD +     N  D   +HVGID+NS+ S        V    D+ SG+  + WI Y+
Sbjct: 118 VAVEFDTFLNPEFNDIDD--NHVGIDVNSIISVASESASFVPL--DLNSGKPIQVWIDYD 173

Query: 201 SSTHNLSVAFTGF---RNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSW 257
            S+  LSV        +  L     L   VDL   LPE+V  GFS +TG       + SW
Sbjct: 174 GSSKRLSVTLAYPNKPKRPL-----LSASVDLSTVLPEWVYVGFSASTGGATESHYVLSW 228

Query: 258 EFN 260
            F+
Sbjct: 229 SFS 231

Length = 231

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  175 bits (447), Expect = 1e-50
 Identities = 85/283 (30%), Positives = 135/283 (47%), Gaps = 41/283 (14%)

Query: 359 KLGQGGFGGVYKGFFRETNSY---IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQL 414
           KLG+G FG VYKG  +  +     +AVK + +  S++  K++  E +++ +L H N+V+L
Sbjct: 2   KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRL 61

Query: 415 LGWCHEKKELLLVYEFMPNGSLDSHL--------FKENSLLTWEFRYKIAQDLASGLLYL 466
           LG C E++ L LV E+M  G L  +L          E S L+ +     A  +A G+ YL
Sbjct: 62  LGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYL 121

Query: 467 QEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YM 521
                +  VHRD+ + N ++  +   KI DFGL+R V      +      T G     +M
Sbjct: 122 A---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKK----TGGKLPIRWM 174

Query: 522 APECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLE 580
           APE    G  + +SDV+SFG++  EI   G  P    + +    +L+++      G  L 
Sbjct: 175 APESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE---VLEYL----RKGYRLP 227

Query: 581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
              P  C D    ++  LM   L C   D   RP+  +++  L
Sbjct: 228 K--PEYCPD----ELYELM---LSCWQLDPEDRPTFSELVERL 261

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  171 bits (436), Expect = 6e-49
 Identities = 77/276 (27%), Positives = 125/276 (45%), Gaps = 43/276 (15%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLL 415
           + LG+G FG VY    ++T   +AVK   +S  S++ ++    E++I+S L+H N+V+  
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Query: 416 GWCH--EKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLASGLLYLQE 468
           G     EK  L +  E++  GSL S L       E        R K  + +  GL YL  
Sbjct: 66  GSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEP-----VIR-KYTRQILEGLAYLHS 119

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV-EHAKGSQTTVLAGTMGYMAPECAT 527
                +VHRDIK +NI++DS+   K+ DFG A+ + +   G  T  + GT  +MAPE   
Sbjct: 120 ---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIR 176

Query: 528 TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY--GNGKLLEAVDPR 585
             +  + +D++S G   +E+A G+ P +                LY  G+      +   
Sbjct: 177 GEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA--------LYKIGSSGEPPEIPEH 228

Query: 586 L---CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQ 618
           L    +DF    + +       C   D   RP+  +
Sbjct: 229 LSEEAKDF----LRK-------CLRRDPKKRPTADE 253

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  149 bits (379), Expect = 4e-41
 Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 17/207 (8%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLV 412
            F   +K+G+GGFG VYK   + T   +A+K +   SK+  ++  +E++I+ + +H N+V
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIV 60

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDS------HLFKENSLLTWEFRYKIAQDLASGLLYL 466
           +  G   +K EL +V EF   GSL            E+ +        + ++L  GL YL
Sbjct: 61  KYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAY------VCKELLKGLEYL 114

Query: 467 QEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECA 526
                  ++HRDIK++NI+L S+   K+ DFGL+  +   K   T V  GT  +MAPE  
Sbjct: 115 H---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV--GTPYWMAPEVI 169

Query: 527 TTGKASKESDVYSFGIVALEIACGRKP 553
                  ++D++S GI A+E+A G+ P
Sbjct: 170 NGKPYDYKADIWSLGITAIELAEGKPP 196

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  131 bits (332), Expect = 1e-34
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 17/203 (8%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVS--QGSKQGIKEYASEVKIISRLRHRNLVQLL 415
             +G+G FG VYKG   ET  ++A+K++S  +  ++ +K    E+ ++  L+H N+V+ +
Sbjct: 6   DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYI 65

Query: 416 GWCHEKKELLLVYEFMPNGSLDS-----HLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           G       L ++ E+  NGSL         F E SL+     Y + Q L  GL YL E  
Sbjct: 66  GSIETSDSLYIILEYAENGSLRQIIKKFGPFPE-SLVA---VY-VYQVL-QGLAYLHE-- 117

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK 530
            Q V+HRDIK++NI+   +   K+ DFG+A  +        +V  GT  +MAPE      
Sbjct: 118 -QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASV-VGTPYWMAPEVIEMSG 175

Query: 531 ASKESDVYSFGIVALEIACGRKP 553
           AS  SD++S G   +E+  G  P
Sbjct: 176 ASTASDIWSLGCTVIELLTGNPP 198

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  131 bits (331), Expect = 2e-34
 Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 29/211 (13%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYA-SEVKIISRLRHRNLVQLL 415
           +++G+G FG VY    +       +K +      +  +E A +EVKI+ +L H N+++  
Sbjct: 6   KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIK-- 63

Query: 416 GWCHE----KKELLLVYEFMPNGSLDSHL---------FKENSLLTWEFRYKIAQDLASG 462
              +E    K +L +V E+   G L   +         F E  +L W       Q L   
Sbjct: 64  --YYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDW-----FVQ-LCLA 115

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
           L YL     + ++HRDIK  NI L SN   K+GDFG+++++        TV+ GT  Y++
Sbjct: 116 LKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVV-GTPYYLS 171

Query: 523 PECATTGKASKESDVYSFGIVALEIACGRKP 553
           PE       + +SD++S G V  E+   + P
Sbjct: 172 PELCQNKPYNYKSDIWSLGCVLYELCTLKHP 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score =  130 bits (330), Expect = 4e-34
 Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 49/285 (17%)

Query: 357 DQKLGQGGFGGVYKGFFRETNS---YIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLV 412
           ++ +G G FG V +G  +        +A+K +  GS    + ++ +E  I+ +  H N++
Sbjct: 9   EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNII 68

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
           +L G   + + ++++ E+M NGSLD  L + +   T      + + +ASG+ YL    E 
Sbjct: 69  RLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLS---EM 125

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG------YMAPECA 526
             VHRD+ + NI+++SN   K+ DFGL+R +E ++ + T     T G      + APE  
Sbjct: 126 NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYT-----TKGGKIPIRWTAPEAI 180

Query: 527 TTGKASKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD-- 583
              K +  SDV+SFGIV  E+ + G +P              W      N  +++AV+  
Sbjct: 181 AYRKFTSASDVWSFGIVMWEVMSYGERPY-------------WDMS---NQDVIKAVEDG 224

Query: 584 -----PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
                P  C       + +LM   L C   D N RP+  Q++  L
Sbjct: 225 YRLPPPMDCP----SALYQLM---LDCWQKDRNERPTFSQIVSTL 262

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  129 bits (326), Expect = 1e-33
 Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 25/272 (9%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRV-SQGSKQGIKEYASEVKIISRLRHRN 410
           +D    + LGQG  G VYK   + T    A+K++   G ++  K+   E+K +       
Sbjct: 1   SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPY 60

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           +V+  G  +++ E+ +V E+M  GSL   L K+   +       IA+ +  GL YL  + 
Sbjct: 61  VVKCYGAFYKEGEISIVLEYMDGGSLAD-LLKKVGKIPEPVLAYIARQILKGLDYLHTKR 119

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK 530
               +HRDIK SN++++S    KI DFG+++++E+      T + GT+ YM+PE      
Sbjct: 120 HI--IHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFV-GTVTYMSPERIQGES 176

Query: 531 ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC--- 587
            S  +D++S G+  LE A G+ P  P        L+Q +           ++        
Sbjct: 177 YSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAI-----CDGPPPSLPAEEFSPE 231

Query: 588 -RDFDGQQIERLMIVGLWCAHPDENLRPSIRQ 618
            RDF    I         C   D   RPS  +
Sbjct: 232 FRDF----ISA-------CLQKDPKKRPSAAE 252

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  127 bits (321), Expect = 4e-33
 Identities = 87/269 (32%), Positives = 132/269 (49%), Gaps = 27/269 (10%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVS-----QGSKQGIKEYASEVKIISRLRHRNLV 412
           + LG G FG VY+G   +   + AVK VS     Q  ++ +K+   E+ ++S+L+H N+V
Sbjct: 6   ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIV 65

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
           Q LG   E+  L +  E +P GSL   L K  S      R    Q L  GL YL    ++
Sbjct: 66  QYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQIL-LGLEYLH---DR 121

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE-CATTGKA 531
             VHRDIK +NI++D+N   K+ DFG+A+ V   + S      G+  +MAPE  A  G  
Sbjct: 122 NTVHRDIKGANILVDTNGVVKLADFGMAKQVV--EFSFAKSFKGSPYWMAPEVIAQQGGY 179

Query: 532 SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD 591
              +D++S G   LE+A G      K P  Q+  +  V+ + G  K L  +   L  +  
Sbjct: 180 GLAADIWSLGCTVLEMATG------KPPWSQLEGVAAVFKI-GRSKELPPIPDHLSDE-- 230

Query: 592 GQQIERLMIVGLWCAHPDENLRPSIRQVI 620
                +  I  L C   D +LRP+  +++
Sbjct: 231 ----AKDFI--LKCLQRDPSLRPTAAELL 253

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score =  127 bits (321), Expect = 4e-33
 Identities = 84/282 (29%), Positives = 135/282 (47%), Gaps = 32/282 (11%)

Query: 347 LALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL 406
            A+ + +      +G+G FG V  G +R     +AVK +   S    + + +E  +++ L
Sbjct: 1   WAINSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-AAQAFLAEASVMTTL 57

Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-FKENSLLTWEFRYKIAQDLASGLLY 465
           RH NLVQLLG   +   L +V E+M  GSL  +L  +  +++T   +   A D+  G+ Y
Sbjct: 58  RHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEY 117

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM--GYMAP 523
           L+   E+  VHRD+ + N+++  +  AK+ DFGL      AK +     +G +   + AP
Sbjct: 118 LE---EKNFVHRDLAARNVLVSEDLVAKVSDFGL------AKEASQGQDSGKLPVKWTAP 168

Query: 524 ECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV 582
           E     K S +SDV+SFGI+  EI + GR P  P+ P   V            G  +EA 
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEIYSFGRVPY-PRIPLKDVV------PHVEKGYRMEA- 220

Query: 583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
            P  C      ++ ++M     C   D   RP+ +Q+   L 
Sbjct: 221 -PEGCPP----EVYKVM---KDCWELDPAKRPTFKQLREQLA 254

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score =  127 bits (321), Expect = 8e-33
 Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 33/282 (11%)

Query: 358 QKLGQGGFGGVYKGFFR----ETNSYIAVK--RVSQGSKQGIKEYASEVKIISRLRHRNL 411
           ++LG+G FG V    +      T   +AVK    S   +    ++  E++I+  L H N+
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQH-RSDFEREIEILRTLDHENI 68

Query: 412 VQLLGWCHE--KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
           V+  G C +   + L L+ E++P+GSL  +L +    +  +     +  +  G+ YL   
Sbjct: 69  VKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGS- 127

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECAT 527
             Q  +HRD+ + NI+++S    KI DFGLA+++   K        G   + + APEC  
Sbjct: 128 --QRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLR 185

Query: 528 TGKASKESDVYSFGIVALEI-ACGRKPINPKA--------PQGQVSLLQWVWDLYGNGKL 578
           T K S  SDV+SFG+   E+   G    +P A         QGQ+ + + + +L   G+ 
Sbjct: 186 TSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL-ELLKEGER 244

Query: 579 LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
           L       C D     +  LM +   C   +   RPS   +I
Sbjct: 245 LPRPPS--CPDE----VYDLMKL---CWEAEPQDRPSFADLI 277

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score =  126 bits (318), Expect = 1e-32
 Identities = 83/281 (29%), Positives = 135/281 (48%), Gaps = 38/281 (13%)

Query: 343 PYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKI 402
           P +E  L       ++KLG G FG V++G ++     +A+K +        +++  EV+ 
Sbjct: 4   PREEFTL-------ERKLGSGYFGEVWEGLWK-NRVRVAIKILKSDDLLKQQDFQKEVQA 55

Query: 403 ISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK-ENSLLTWEFRYKIAQDLAS 461
           + RLRH++L+ L   C   + + ++ E M  GSL + L   E  +L       +A  +A 
Sbjct: 56  LKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAE 115

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV-EHAKGSQTTVLAGTMGY 520
           G+ YL+   EQ  +HRD+ + NI++  +   K+ DFGLARL+ E    S    +     +
Sbjct: 116 GMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIP--YKW 170

Query: 521 MAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQV----SLLQWVWDLYGNG 576
            APE A+ G  S +SDV+SFGI+  E+             GQV         V+D    G
Sbjct: 171 TAPEAASHGTFSTKSDVWSFGILLYEMFT----------YGQVPYPGMNNHEVYDQITAG 220

Query: 577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIR 617
             +    P  C     Q+I ++M+   W A P++  RPS +
Sbjct: 221 YRMPC--PAKCP----QEIYKIML-ECWAAEPED--RPSFK 252

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score =  124 bits (314), Expect = 7e-32
 Identities = 76/284 (26%), Positives = 137/284 (48%), Gaps = 51/284 (17%)

Query: 360 LGQGGFGGVYKGFFR---ETNSY-IAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQL 414
           LG G FG VYKG +    E     +A+K + + +  +  KE   E  +++ + H ++V+L
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 415 LGWCHEKKELLLVYEFMPNGSLDSHLFKEN-------SLLTWEFRYKIAQDLASGLLYLQ 467
           LG C   + + L+ + MP G L  ++ + +        LL W         +A G+ YL+
Sbjct: 75  LGICLSSQ-VQLITQLMPLGCLLDYV-RNHKDNIGSQYLLNW------CVQIAKGMSYLE 126

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE------HAKGSQTTVLAGTMGYM 521
           E   + +VHRD+ + N+++ +  + KI DFGLA+L++      HA+G +  +      +M
Sbjct: 127 E---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPI-----KWM 178

Query: 522 APECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLE 580
           A E       + +SDV+S+G+   E+   G KP     P  ++       DL   G+ L 
Sbjct: 179 ALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI-PAVEIP------DLLEKGERLP 231

Query: 581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
              P +C       I+  M++ + C   D   RP+ +++I+  +
Sbjct: 232 --QPPIC------TIDVYMVL-VKCWMIDAESRPTFKELINEFS 266

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score =  122 bits (308), Expect = 3e-31
 Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 19/204 (9%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQL 414
           + +G+G FG V     R+T    A+K +++     K  ++   +E +I+  L H  LV L
Sbjct: 6   RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNL 65

Query: 415 LGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLASGLLYLQEE 469
                +++ + LV + +  G L  HL     F E  +  W        ++   L YL   
Sbjct: 66  WYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFW------ICEIVLALEYLHS- 118

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG 529
             + ++HRDIK  NI+LD   +  I DF +A  V     + TT  +GT GYMAPE     
Sbjct: 119 --KGIIHRDIKPDNILLDEQGHVHITDFNIATKVT--PDTLTTSTSGTPGYMAPEVLCRQ 174

Query: 530 KASKESDVYSFGIVALEIACGRKP 553
             S   D +S G+ A E   G++P
Sbjct: 175 GYSVAVDWWSLGVTAYECLRGKRP 198

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  123 bits (310), Expect = 3e-31
 Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 11/203 (5%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVK--RVSQGSKQGIKEYASEVKIISRLRHRNL 411
           + + +K+G+G  G VYK   R T   +A+K  R+ + +K+ I    +E+ I+   +H N+
Sbjct: 21  YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELII---NEILIMKDCKHPNI 77

Query: 412 VQLLGWCHE-KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           V      +    EL +V E+M  GSL   + +    +       + +++  GL YL    
Sbjct: 78  VDYYD-SYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHS-- 134

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK 530
            Q V+HRDIKS NI+L  + + K+ DFG A  +   K  + +V+ GT  +MAPE      
Sbjct: 135 -QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVV-GTPYWMAPEVIKRKD 192

Query: 531 ASKESDVYSFGIVALEIACGRKP 553
              + D++S GI+ +E+A G  P
Sbjct: 193 YGPKVDIWSLGIMCIEMAEGEPP 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  121 bits (307), Expect = 3e-31
 Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 18/202 (8%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA------SEVKIISRLRHRNLVQ 413
           LG+G FG V     ++T    A+K +    K+ I +        +E  I+SR+ H  +V+
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLK---KKKIIKRKEVEHTLTERNILSRINHPFIVK 57

Query: 414 LLGWC--HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           L        +++L LV E+ P G L SHL KE        R+  A+ +   L YL     
Sbjct: 58  L--HYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAE-IVLALEYLHS--- 111

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA 531
             +++RD+K  NI+LD++ + K+ DFGLA+ +   +GS+T    GT  Y+APE       
Sbjct: 112 LGIIYRDLKPENILLDADGHIKLTDFGLAKELSS-EGSRTNTFCGTPEYLAPEVLLGKGY 170

Query: 532 SKESDVYSFGIVALEIACGRKP 553
            K  D +S G++  E+  G+ P
Sbjct: 171 GKAVDWWSLGVLLYEMLTGKPP 192

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score =  121 bits (304), Expect = 8e-31
 Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 22/267 (8%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           Q++G G FG V+ G++ E    +A+K + +G+    +++  E +++ +L H  LVQL G 
Sbjct: 10  QEIGSGQFGLVWLGYWLEKRK-VAIKTIREGAMSE-EDFIEEAQVMMKLSHPKLVQLYGV 67

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
           C E+  + LV+EFM +G L  +L  +    + E    +  D+  G+ YL+      V+HR
Sbjct: 68  CTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLE---SSNVIHR 124

Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDV 537
           D+ + N ++  N   K+ DFG+ R V   + + +T     + + +PE  +  K S +SDV
Sbjct: 125 DLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDV 184

Query: 538 YSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIE 596
           +SFG++  E+ + G+ P   ++   +V     V  +    +L +   PRL      Q + 
Sbjct: 185 WSFGVLMWEVFSEGKTPYENRS-NSEV-----VETINAGFRLYK---PRLA----SQSVY 231

Query: 597 RLMIVGLWCAHPDENLRPSIRQVIHVL 623
            LM     C       RPS   ++H L
Sbjct: 232 ELM---QHCWKERPEDRPSFSLLLHQL 255

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  120 bits (304), Expect = 1e-30
 Identities = 73/202 (36%), Positives = 109/202 (53%), Gaps = 13/202 (6%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLG 416
           ++KLG G FG V+ G +  T   +AVK +  G+    + +  E +I+ +LRH  LVQL  
Sbjct: 11  ERKLGAGQFGEVWMGTWNGTTK-VAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYA 68

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
            C E++ + +V E+M  GSL   L   E   L       +A  +A G+ YL+    +  +
Sbjct: 69  VCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLES---RNYI 125

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT---MGYMAPECATTGKAS 532
           HRD+ + NI++  N   KI DFGLARL+E     + T   G    + + APE A  G+ +
Sbjct: 126 HRDLAARNILVGENLVCKIADFGLARLIED---DEYTAREGAKFPIKWTAPEAANYGRFT 182

Query: 533 KESDVYSFGIVALEIAC-GRKP 553
            +SDV+SFGI+  EI   GR P
Sbjct: 183 IKSDVWSFGILLTEIVTYGRVP 204

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  118 bits (297), Expect = 8e-30
 Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 9/208 (4%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL 411
             F+  +KLG+G +G VYK   +ET   +A+K V    ++ ++E   E+ I+ +     +
Sbjct: 3   EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVP--VEEDLQEIIKEISILKQCDSPYI 60

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           V+  G   +  +L +V E+   GS+   +   N  LT E    I      GL YL     
Sbjct: 61  VKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHS--- 117

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA 531
              +HRDIK+ NI+L+    AK+ DFG++  +      + TV+ GT  +MAPE       
Sbjct: 118 NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVI-GTPFWMAPEVIQEIGY 176

Query: 532 SKESDVYSFGIVALEIACGRKP---INP 556
           + ++D++S GI A+E+A G+ P   I+P
Sbjct: 177 NNKADIWSLGITAIEMAEGKPPYSDIHP 204

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  121 bits (303), Expect = 8e-30
 Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 15/213 (7%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH-RNL 411
            +   +KLG+G FG VY    R+  +   + +  +   + ++ +  E++I++ L H  N+
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHL--FKENSLLTWEFRYKIAQDLASGLLYLQEE 469
           V+L  +  ++  L LV E++  GSL+  L        L+      I   + S L YL   
Sbjct: 61  VKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYL--- 117

Query: 470 WEQCVVHRDIKSSNIMLDSN-FNAKIGDFGLARLVEHAKGSQ-----TTVLAGTMGYMAP 523
             + ++HRDIK  NI+LD +    K+ DFGLA+L+     +       +   GT GYMAP
Sbjct: 118 HSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAP 177

Query: 524 ECAT---TGKASKESDVYSFGIVALEIACGRKP 553
           E         AS  SD++S GI   E+  G  P
Sbjct: 178 EVLLGLSLAYASSSSDIWSLGITLYELLTGLPP 210

Length = 384

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score =  117 bits (295), Expect = 1e-29
 Identities = 67/196 (34%), Positives = 111/196 (56%), Gaps = 14/196 (7%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLL 415
           +K+G+G FG VYKG  +  N+ +AVK  R +       K +  E +I+ +  H N+V+L+
Sbjct: 1   EKIGKGNFGDVYKGVLK-GNTEVAVKTCRSTLPPDLKRK-FLQEAEILKQYDHPNIVKLI 58

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
           G C +K+ + +V E +P GSL + L K+ + LT +   +++ D A+G+ YL+    +  +
Sbjct: 59  GVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLE---SKNCI 115

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT----MGYMAPECATTGKA 531
           HRD+ + N ++  N   KI DFG++R  E   G   TV  G     + + APE    G+ 
Sbjct: 116 HRDLAARNCLVGENNVLKISDFGMSR-EEE--GGIYTVSDGLKQIPIKWTAPEALNYGRY 172

Query: 532 SKESDVYSFGIVALEI 547
           + ESDV+S+GI+  E 
Sbjct: 173 TSESDVWSYGILLWET 188

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score =  116 bits (293), Expect = 2e-29
 Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 44/278 (15%)

Query: 358 QKLGQGGFGGVYKGFFRETNSY-IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLG 416
           ++LG G FG V+ G +R      +A+K + +G+     ++  E K++ +L H NLVQL G
Sbjct: 10  KELGSGQFGVVHLGKWR--GKIDVAIKMIREGAMSE-DDFIEEAKVMMKLSHPNLVQLYG 66

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
            C +++ + +V E+M NG L ++L +    L  E+   +  D+   + YL+       +H
Sbjct: 67  VCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLE---SNGFIH 123

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASK 533
           RD+ + N ++  +   K+ DFGLAR V      Q T   GT   + +  PE     + S 
Sbjct: 124 RDLAARNCLVGEDNVVKVSDFGLARYV---LDDQYTSSQGTKFPVKWAPPEVFDYSRFSS 180

Query: 534 ESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV-------DPR 585
           +SDV+SFG++  E+ + G+ P                ++ + N +++E+V        P+
Sbjct: 181 KSDVWSFGVLMWEVFSEGKMP----------------YERFSNSEVVESVSAGYRLYRPK 224

Query: 586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
           L       ++  +M     C H     RP+ ++++  L
Sbjct: 225 LA----PTEVYTIMYS---CWHEKPEDRPAFKKLLSQL 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  117 bits (294), Expect = 2e-29
 Identities = 74/204 (36%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLL 415
            K+G G FG VY     +T   +AVK  R+     + IKE A E+K++  L+H NLV+  
Sbjct: 6   NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
           G    ++++ +  E+   G+L+  L +   +L           L  GL YL       +V
Sbjct: 66  GVEVHREKVYIFMEYCSGGTLEE-LLEHGRILDEHVIRVYTLQLLEGLAYLHS---HGIV 121

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAK--GSQTTVLAGTMGYMAPECATTGKAS 532
           HRDIK +NI LD N   K+GDFG A +L  +    G +   LAGT  YMAPE  T GK  
Sbjct: 122 HRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGK 181

Query: 533 ---KESDVYSFGIVALEIACGRKP 553
              + +D++S G V LE+A G++P
Sbjct: 182 GHGRAADIWSLGCVVLEMATGKRP 205

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score =  116 bits (293), Expect = 3e-29
 Identities = 69/208 (33%), Positives = 109/208 (52%), Gaps = 8/208 (3%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           +KLG G FG V++G +  T   +AVK +  G+    K++ +E +I+ +LRH  L+QL   
Sbjct: 12  RKLGAGQFGEVWEGLWNNTTP-VAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQLYAV 69

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
           C  ++ + +V E M  GSL  +L       L       +A  +ASG+ YL+    Q  +H
Sbjct: 70  CTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYIH 126

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           RD+ + N+++  N   K+ DFGLAR+++             + + APE A   + S +SD
Sbjct: 127 RDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSD 186

Query: 537 VYSFGIVALEIAC-GRKPINPKAPQGQV 563
           V+SFGI+  EI   GR P  P     +V
Sbjct: 187 VWSFGILLTEIVTYGRMPY-PGMTNAEV 213

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score =  116 bits (292), Expect = 3e-29
 Identities = 77/270 (28%), Positives = 135/270 (50%), Gaps = 26/270 (9%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWC 418
           KLG G +G VY+G +++ +  +AVK + + + + ++E+  E  ++  ++H NLVQLLG C
Sbjct: 13  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 71

Query: 419 HEKKELLLVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
             +    ++ EFM  G+L  +L + N   +       +A  ++S + YL+   ++  +HR
Sbjct: 72  TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 128

Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKE 534
           D+ + N ++  N   K+ DFGL+RL+    G   T  AG    + + APE     K S +
Sbjct: 129 DLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 185

Query: 535 SDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQ 594
           SDV++FG++  EIA         +P   + L Q V++L   G  +E   P  C      +
Sbjct: 186 SDVWAFGVLLWEIA-----TYGMSPYPGIDLSQ-VYELLEKGYRMER--PEGCP----PK 233

Query: 595 IERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           +  LM     C   + + RPS  ++     
Sbjct: 234 VYELM---RACWQWNPSDRPSFAEIHQAFE 260

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score =  116 bits (293), Expect = 4e-29
 Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 31/282 (10%)

Query: 358 QKLGQGGFGGV----YKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQ 413
           Q+LG+G FG V    Y      T   +AVK++   + + ++++  E++I+  L+H N+V+
Sbjct: 10  QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVK 69

Query: 414 LLGWCHE--KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
             G C+   ++ L LV E++P GSL  +L K    L        A  +  G+ YL     
Sbjct: 70  YKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGS--- 126

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTG 529
           +  VHRD+ + NI+++S    KIGDFGL +++   K        G   + + APE  T  
Sbjct: 127 KRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTES 186

Query: 530 KASKESDVYSFGIVALEI-ACGRKPINPKA---------PQGQVSLLQWVWDLYGNGKLL 579
           K S  SDV+SFG+V  E+     K  +P A          QGQ+ +   + +L  N   L
Sbjct: 187 KFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLI-ELLKNNGRL 245

Query: 580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIH 621
            A  P  C      +I  +M     C + D + RPS  ++  
Sbjct: 246 PA--PPGCPA----EIYAIM---KECWNNDPSQRPSFSELAL 278

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  116 bits (293), Expect = 5e-29
 Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 31/227 (13%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKE----YAS-EVKIISRL 406
           +DF   + +G+G F  V     +ETN   A+K + +  +Q IKE    Y   E ++++RL
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDK--RQLIKEKKVKYVKIEKEVLTRL 58

Query: 407 -RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
             H  +++L     +++ L  V E+ PNG L  ++ K  SL     R+  A+ +   L Y
Sbjct: 59  NGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAE-ILLALEY 117

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV-------------------EHA 506
           L     + ++HRD+K  NI+LD + + KI DFG A+++                      
Sbjct: 118 LHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEK 174

Query: 507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
              +     GT  Y++PE      A K SD+++ G +  ++  G+ P
Sbjct: 175 NRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPP 221

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score =  115 bits (289), Expect = 1e-28
 Identities = 84/279 (30%), Positives = 128/279 (45%), Gaps = 32/279 (11%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI-KEYASEVKIISRLRHRN 410
           +D     +LG G  G V K   R T   +AVK +     + I K+   E+ I+ +     
Sbjct: 1   DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPY 60

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY-KIAQDLASGLLYLQEE 469
           +V   G  +   ++ +  E+M  GSLD  + KE      E    KIA  +  GL YL E+
Sbjct: 61  IVGFYGAFYNNGDISICMEYMDGGSLDK-ILKEVQGRIPERILGKIAVAVLKGLTYLHEK 119

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPECATT 528
            +  ++HRD+K SNI+++S    K+ DFG++ +LV     +      GT  YMAPE    
Sbjct: 120 HK--IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT----FVGTSSYMAPERIQG 173

Query: 529 GKASKESDVYSFGIVALEIACGRKPINP--KAPQGQVSLLQWVWDLYGNGKLLEAVD--- 583
              S +SD++S G+  +E+A GR P  P    P G   LLQ++            V+   
Sbjct: 174 NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYI------------VNEPP 221

Query: 584 PRLCRD-FDGQQIERLMIVGLWCAHPDENLRPSIRQVIH 621
           PRL    F     +    V L C   D   RPS ++++ 
Sbjct: 222 PRLPSGKFSPDFQD---FVNL-CLIKDPRERPSYKELLE 256

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score =  114 bits (287), Expect = 3e-28
 Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 58/297 (19%)

Query: 358 QKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNL 411
           ++LG+G FG V+ G             +AVK + + +    ++ +  E ++++  +H N+
Sbjct: 11  RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENI 70

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLD----SHLFKENSL---------LTWEFRYKIAQD 458
           V+  G C E    ++V+E+M +G L+    SH      L         LT     +IA  
Sbjct: 71  VKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQ 130

Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV---EHAKGSQTTVLA 515
           +ASG++YL     Q  VHRD+ + N ++  +   KIGDFG++R V   ++ +    T+L 
Sbjct: 131 IASGMVYLA---SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLP 187

Query: 516 GTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYG 574
             + +M PE     K + ESDV+SFG+V  EI   G++P                W    
Sbjct: 188 --IRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQP----------------WYGLS 229

Query: 575 NGKLLEAVD-------PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           N +++E +        PR C       +  +M   L C   D   R +I+ +   L 
Sbjct: 230 NEEVIECITQGRLLQRPRTCPSE----VYDIM---LGCWKRDPQQRINIKDIHERLQ 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score =  113 bits (283), Expect = 6e-28
 Identities = 85/272 (31%), Positives = 127/272 (46%), Gaps = 30/272 (11%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI---KEYA---SEVKIISRLRHRNLVQ 413
           LG+G +G VY G        IAVK+V   +   +   KEY     EV ++  L+H N+VQ
Sbjct: 8   LGKGAYGTVYCGL-TNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQ 66

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC 473
            LG C +   + +  EF+P GS+ S L +   L    F  K  + +  G+ YL      C
Sbjct: 67  YLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFC-KYTKQILDGVAYLHN---NC 122

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVE--HAKGSQTTVLA---GTMGYMAPECATT 528
           VVHRDIK +N+ML  N   K+ DFG AR +      G+ + +L    GT  +MAPE    
Sbjct: 123 VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINE 182

Query: 529 GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR 588
               ++SD++S G    E+A G+ P+        +  +       G  + L    PRL  
Sbjct: 183 SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYI-------GAHRGLM---PRLPD 232

Query: 589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
            F    I+ +      C   D++ RPS  Q++
Sbjct: 233 SFSAAAIDFVTS----CLTRDQHERPSALQLL 260

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score =  112 bits (283), Expect = 7e-28
 Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEY-ASEVKIISRLRHRNLVQLLG 416
            +G+G FG V K   +     +  K +  G+  +  K+   SEV I+  L+H N+V+   
Sbjct: 7   TIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYD 66

Query: 417 WCH--EKKELLLVYEFMPNGSLDS---HLFKENSLLTWEFRYKIAQDLASGLLYLQE--- 468
                  + L +V E+   G L        KE   +  EF ++I   L   LL L E   
Sbjct: 67  RIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQL---LLALYECHN 123

Query: 469 --EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECA 526
             +    V+HRD+K +NI LD+N N K+GDFGLA+++ H   S      GT  YM+PE  
Sbjct: 124 RSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDS-SFAKTYVGTPYYMSPEQL 182

Query: 527 TTGKASKESDVYSFGIVALEIACGRKPIN 555
                 ++SD++S G +  E+     P  
Sbjct: 183 NHMSYDEKSDIWSLGCLIYELCALSPPFT 211

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score =  111 bits (279), Expect = 2e-27
 Identities = 81/280 (28%), Positives = 142/280 (50%), Gaps = 34/280 (12%)

Query: 357 DQKLGQGGFGGVYKGFFR---ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLV 412
           ++ +G G FG V +G  +   +   ++A+K +  G +++  +++ SE  I+ +  H N++
Sbjct: 9   EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNII 68

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
            L G   + + ++++ EFM NG+LDS L + +   T      + + +A+G+ YL E    
Sbjct: 69  HLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSE---M 125

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG--SQTTVLAGTMG--YMAPECATT 528
             VHRD+ + NI+++SN   K+ DFGL+R +E      + T+ L G +   + APE    
Sbjct: 126 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY 185

Query: 529 GKASKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV--DPR 585
            K +  SDV+S+GIV  E+ + G +P                WD+  N  ++ A+  D R
Sbjct: 186 RKFTSASDVWSYGIVMWEVMSYGERP---------------YWDM-SNQDVINAIEQDYR 229

Query: 586 LCRDFD-GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           L    D    + +LM   L C   D N RP   Q++  L+
Sbjct: 230 LPPPMDCPTALHQLM---LDCWQKDRNARPKFGQIVSTLD 266

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173886 cd01951, lectin_L-type, legume lectins

 Score =  109 bits (274), Expect = 4e-27
 Identities = 66/239 (27%), Positives = 96/239 (40%), Gaps = 28/239 (11%)

Query: 35  LTFNYTSFSPQYDDNITY--ERAYPDSNRVIQL-PANRETAGRATYNQSMRLWDKATGNL 91
            + N+++FS     N            + V++L P     AG A Y   + L        
Sbjct: 1   TSLNFSNFSNNNQSNWQLNGSATLTTDSGVLRLTPDTGNQAGSAWYKTPIDLS------- 53

Query: 92  TDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVA 151
            DFTT F F + ++ ++  ADG+AF L  Q        GGG  G        NS    VA
Sbjct: 54  KDFTTTFKFYLGTKGTNG-ADGIAFVL--QNDPAGALGGGGGGGGLGYGGIGNS----VA 106

Query: 152 VEFDVYVNS--WDPTFSHVGIDINSVKSKKN-------VSWWSDVKSGRRNEAWISYNSS 202
           VEFD Y N    DP  +H+ ID+N   +           S  +    G  +   I+Y+ +
Sbjct: 107 VEFDTYKNDDNNDPNGNHISIDVNGNGNNTALATSLGSASLPNGTGLGNEHTVRITYDPT 166

Query: 203 THNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNS 261
           T+ L+V              +   VDL Q  P    FGF+ +TG    +  I +W F S
Sbjct: 167 TNTLTVYLDNGSTLTS--LDITIPVDLIQLGPTKAYFGFTASTGGLTNLHDILNWSFTS 223

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 223

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score =  110 bits (277), Expect = 5e-27
 Identities = 79/289 (27%), Positives = 132/289 (45%), Gaps = 46/289 (15%)

Query: 357 DQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGSKQG-IKEYASEVKIISRLRHRN 410
            ++LGQG FG VY+G  +     E  + +A+K V++ +      E+ +E  ++      +
Sbjct: 11  IRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHH 70

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENS---------LLTWEFRYKIAQDLAS 461
           +V+LLG     +  L+V E M  G L S+L                T +   ++A ++A 
Sbjct: 71  VVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIAD 130

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV-EH---AKGSQTTVLAGT 517
           G+ YL     +  VHRD+ + N M+  +   KIGDFG+ R + E     KG +     G 
Sbjct: 131 GMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGK-----GL 182

Query: 518 MG--YMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYG 574
           +   +MAPE    G  + +SDV+SFG+V  E+A    +P      QG  +  + V     
Sbjct: 183 LPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPY-----QGLSN--EEVLKFVI 235

Query: 575 NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
           +G  L+   P  C D     +  LM     C   +  +RP+  +++  L
Sbjct: 236 DGGHLDL--PENCPDK----LLELM---RMCWQYNPKMRPTFLEIVSSL 275

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score =  109 bits (274), Expect = 6e-27
 Identities = 64/188 (34%), Positives = 106/188 (56%), Gaps = 5/188 (2%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWC 418
           LG+G FG V+KG  ++    +AVK   +   Q +K ++ SE +I+ +  H N+V+L+G C
Sbjct: 3   LGKGNFGEVFKGTLKDKTP-VAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61

Query: 419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
            +++ + +V E +P G   S L K+   L  +   K A D A+G+ YL  E + C +HRD
Sbjct: 62  TQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYL--ESKNC-IHRD 118

Query: 479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVY 538
           + + N ++  N   KI DFG++R  +    S + +    + + APE    G+ S ESDV+
Sbjct: 119 LAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVW 178

Query: 539 SFGIVALE 546
           S+GI+  E
Sbjct: 179 SYGILLWE 186

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score =  108 bits (273), Expect = 1e-26
 Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 30/210 (14%)

Query: 360 LGQGGFGGVYKGFFRETNSY---IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLL 415
           LG G FG V KG +   +     +AVK + Q     G KE+  E  ++++L H  +V+L+
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           G C + + L+LV E  P G L  +L        + L         A  +A G+ YL+   
Sbjct: 63  GVC-KGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKEL------AHQVAMGMAYLES-- 113

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG------YMAPE 524
            +  VHRD+ + N++L +   AKI DFG++R    A G+ +     T        + APE
Sbjct: 114 -KHFVHRDLAARNVLLVNRHQAKISDFGMSR----ALGAGSDYYRATTAGRWPLKWYAPE 168

Query: 525 CATTGKASKESDVYSFGIVALEI-ACGRKP 553
           C   GK S +SDV+S+G+   E  + G KP
Sbjct: 169 CINYGKFSSKSDVWSYGVTLWEAFSYGAKP 198

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  108 bits (273), Expect = 2e-26
 Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 22/226 (9%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIK-EYASEVKIISRLRHRNLVQLLG 416
           ++G+G +G VYK   ++T   +A+K++  +  K+G       E+K++ +LRH N+V+L  
Sbjct: 6   QIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKE 65

Query: 417 WCHEKK--ELLLVYEFMP---NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
               K    + +V+E+M     G LDS   K     T        + L  GL YL     
Sbjct: 66  IVTSKGKGSIYMVFEYMDHDLTGLLDSPEVK----FTESQIKCYMKQLLEGLQYLHS--- 118

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC---ATT 528
             ++HRDIK SNI+++++   K+ DFGLAR       +  T    T+ Y  PE    AT 
Sbjct: 119 NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGAT- 177

Query: 529 GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG 574
            +   E D++S G +  E+  G+          Q+     +++L G
Sbjct: 178 -RYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEK---IFELCG 219

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score =  108 bits (271), Expect = 3e-26
 Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 11/201 (5%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRV-----SQGSKQGIKEYASEVKIISRLRHRNLVQL 414
           LGQG FG VY  +  +T   +AVK+V     S  +K+ +     E++++  L+H  +VQ 
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69

Query: 415 LGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCV 474
            G   + + L +  E+MP GS+   L K    LT     K  + +  G+ YL       +
Sbjct: 70  YGCLRDDETLSIFMEYMPGGSVKDQL-KAYGALTETVTRKYTRQILEGVEYLHS---NMI 125

Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLARLVE--HAKGSQTTVLAGTMGYMAPECATTGKAS 532
           VHRDIK +NI+ DS  N K+GDFG ++ ++   + G+    + GT  +M+PE  +     
Sbjct: 126 VHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYG 185

Query: 533 KESDVYSFGIVALEIACGRKP 553
           +++DV+S G   +E+   + P
Sbjct: 186 RKADVWSVGCTVVEMLTEKPP 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  108 bits (272), Expect = 3e-26
 Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 7/169 (4%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYA-SEVKIISRLRHRNLVQLL 415
           +KLG+G +G VYK   ++T   +A+K++     ++GI   A  E+ ++  L+H N+V+LL
Sbjct: 5   EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLL 64

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
              H +++L LV+E+     L  +L K    L+      I   L  GL Y        ++
Sbjct: 65  DVIHTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHS---HRIL 120

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE 524
           HRD+K  NI+++ +   K+ DFGLAR       + T  +  T+ Y APE
Sbjct: 121 HRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVV-TLWYRAPE 168

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score =  107 bits (270), Expect = 5e-26
 Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 11/200 (5%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCH 419
           LG G FG VYK   +ET  + A K +   S++ ++++  E+ I+S  +H N+V L     
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF 72

Query: 420 EKKELLLVYEFMPNGSLDSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
            + +L ++ EF   G+LDS + + E  L   + RY + + +   L +L       V+HRD
Sbjct: 73  YENKLWILIEFCDGGALDSIMLELERGLTEPQIRY-VCRQMLEALNFLH---SHKVIHRD 128

Query: 479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE---CATTGKASKE- 534
           +K+ NI+L  + + K+ DFG++   +     + T + GT  +MAPE   C T      + 
Sbjct: 129 LKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFI-GTPYWMAPEVVACETFKDNPYDY 187

Query: 535 -SDVYSFGIVALEIACGRKP 553
            +D++S GI  +E+A    P
Sbjct: 188 KADIWSLGITLIELAQMEPP 207

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  106 bits (266), Expect = 2e-25
 Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 17/205 (8%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLG 416
           K+G+G +G VYK   + T   +A+K++    + +GI + A  E+K++  L H N+++LL 
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLD 65

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKE----NSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
               K +L LV+EFM     D+ L+K        L           L  GL +       
Sbjct: 66  VFRHKGDLYLVFEFM-----DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG-- 118

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKAS 532
            ++HRD+K  N+++++    K+ DFGLAR         T  +  T  Y APE     K  
Sbjct: 119 -ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVV-TRWYRAPELLLGDKGY 176

Query: 533 KES-DVYSFGIVALEIACGRKPINP 556
               D++S G +  E+   R P+ P
Sbjct: 177 STPVDIWSVGCIFAELLSRR-PLFP 200

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score =  105 bits (264), Expect = 2e-25
 Identities = 68/197 (34%), Positives = 108/197 (54%), Gaps = 8/197 (4%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWC 418
           KLGQG FG V+ G +  T + +A+K +  G+    + +  E +++ +LRH  LVQL    
Sbjct: 13  KLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV 70

Query: 419 HEKKELLLVYEFMPNGSLDSHLFKENS-LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
            E+  + +V E+M  GSL   L  E    L       +A  +ASG+ Y++       VHR
Sbjct: 71  SEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 126

Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDV 537
           D++++NI++  N   K+ DFGLARL+E  + +        + + APE A  G+ + +SDV
Sbjct: 127 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 186

Query: 538 YSFGIVALEIAC-GRKP 553
           +SFGI+  E+   GR P
Sbjct: 187 WSFGILLTELTTKGRVP 203

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score =  105 bits (264), Expect = 2e-25
 Identities = 80/278 (28%), Positives = 141/278 (50%), Gaps = 32/278 (11%)

Query: 357 DQKLGQGGFGGVYKGFFR---ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLV 412
           ++ +G G FG V  G  +   +    +A+K +  G +++  +++ SE  I+ +  H N++
Sbjct: 9   EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNII 68

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
            L G   + K +++V E+M NGSLD+ L K +   T      + + +ASG+ YL    + 
Sbjct: 69  HLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLS---DM 125

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG--YMAPECATTGK 530
             VHRD+ + NI+++SN   K+ DFGL+R++E    +  T   G +   + APE     K
Sbjct: 126 GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 185

Query: 531 ASKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLC 587
            +  SDV+S+GIV  E+ + G +P                W++  N  +++A++   RL 
Sbjct: 186 FTSASDVWSYGIVMWEVMSYGERP---------------YWEM-SNQDVIKAIEEGYRLP 229

Query: 588 RDFD-GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
              D    + +LM   L C   D N RP   Q++ +L+
Sbjct: 230 APMDCPAALHQLM---LDCWQKDRNERPKFEQIVSILD 264

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score =  105 bits (263), Expect = 3e-25
 Identities = 75/275 (27%), Positives = 138/275 (50%), Gaps = 32/275 (11%)

Query: 360 LGQGGFGGVYKGFFR---ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLL 415
           +G G FG V++G  +        +A+K +  G +++  +++ SE  I+ +  H N+++L 
Sbjct: 13  IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLE 72

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
           G   + K  +++ E+M NG+LD +L   +   +      + + +A+G+ YL +      V
Sbjct: 73  GVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSD---MNYV 129

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG--YMAPECATTGKASK 533
           HRD+ + NI+++SN   K+ DFGL+R++E       T   G +   + APE     K + 
Sbjct: 130 HRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTS 189

Query: 534 ESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDF 590
            SDV+SFGIV  E+ + G +P                WD+  N ++++A++   RL    
Sbjct: 190 ASDVWSFGIVMWEVMSFGERP---------------YWDM-SNHEVMKAINDGFRLPAPM 233

Query: 591 D-GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           D    + +LM   L C   D   RP    ++++L+
Sbjct: 234 DCPSAVYQLM---LQCWQQDRARRPRFVDIVNLLD 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score =  105 bits (263), Expect = 4e-25
 Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 16/220 (7%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI-KEYASEVKIISRLRHRNLVQLLGW 417
           +LG+G  G V K   + T    A+K ++      + K+   E++I    +   +V+  G 
Sbjct: 8   RLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGA 67

Query: 418 CHEKKE--LLLVYEFMPNGSLDSHL--FKENSLLTWEFRY-KIAQDLASGLLYLQEEWEQ 472
             ++    + +  E+   GSLDS     K+      E    KIA+ +  GL YL     +
Sbjct: 68  FLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---R 124

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPECATTGKA 531
            ++HRDIK SNI+L      K+ DFG++  LV     S      GT  YMAPE       
Sbjct: 125 KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN----SLAGTFTGTSFYMAPERIQGKPY 180

Query: 532 SKESDVYSFGIVALEIACGRKPINPKAPQ--GQVSLLQWV 569
           S  SDV+S G+  LE+A  R P  P+     G + LL ++
Sbjct: 181 SITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYI 220

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score =  104 bits (262), Expect = 5e-25
 Identities = 86/284 (30%), Positives = 129/284 (45%), Gaps = 33/284 (11%)

Query: 358 QKLGQGGFGGV----YKGFFRETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLV 412
           + LG+G FG V    Y      T   +AVK + +   Q     +  E+ I+  L H N+V
Sbjct: 10  RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIV 69

Query: 413 QLLGWCHEK--KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           +  G C E+  K L L+ E++P GSL  +L K    L     +  AQ +  G+ YL    
Sbjct: 70  KYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLF--AQQICEGMAYLHS-- 125

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATT 528
            Q  +HRD+ + N++LD++   KIGDFGLA+ V            G   + + A EC   
Sbjct: 126 -QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKE 184

Query: 529 GKASKESDVYSFGIVALEIA--CGRKPINPKA-------PQGQVSLLQWVWDLYGNGKLL 579
            K S  SDV+SFG+   E+   C  K   PK         QGQ+++++ +       +LL
Sbjct: 185 NKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLI-------ELL 237

Query: 580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
           E      C     Q++  LM    W        RP+ R +I +L
Sbjct: 238 ERGMRLPCPKNCPQEVYILM-KNCWETEA--KFRPTFRSLIPIL 278

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score =  104 bits (262), Expect = 5e-25
 Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 17/208 (8%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYASEVKIISRLRHRN 410
             F   + +G+G FG VYK   + TN  +A+K +  + ++  I++   E++ +S+ R   
Sbjct: 1   ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPY 60

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGS----LDSHLFKENSLLTWEFRYKIAQDLASGLLYL 466
           + +  G   +  +L ++ E+   GS    L      E  +        I +++  GL YL
Sbjct: 61  ITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAF------ILREVLLGLEYL 114

Query: 467 QEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPEC 525
            E   +  +HRDIK++NI+L    + K+ DFG++ +L        T V  GT  +MAPE 
Sbjct: 115 HE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFV--GTPFWMAPEV 169

Query: 526 ATTGKASKESDVYSFGIVALEIACGRKP 553
                  +++D++S GI A+E+A G  P
Sbjct: 170 IKQSGYDEKADIWSLGITAIELAKGEPP 197

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score =  103 bits (257), Expect = 1e-24
 Identities = 80/275 (29%), Positives = 128/275 (46%), Gaps = 34/275 (12%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLG 416
           +++G+G FG V+ G  R  N+ +AVK   +     +K ++  E +I+ +  H N+V+L+G
Sbjct: 1   ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 60

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
            C +K+ + +V E +  G   + L  E   L  +   ++ ++ A+G+ YL+    +  +H
Sbjct: 61  VCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLE---SKHCIH 117

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-------YMAPECATTG 529
           RD+ + N ++      KI DFG++R  E   G    V A T G       + APE    G
Sbjct: 118 RDLAARNCLVTEKNVLKISDFGMSR--EEEDG----VYASTGGMKQIPVKWTAPEALNYG 171

Query: 530 KASKESDVYSFGIVALE-IACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR 588
           + S ESDV+SFGI+  E  + G  P    + Q     ++        G  L    P LC 
Sbjct: 172 RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIE-------QGVRLPC--PELCP 222

Query: 589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
           D     + RLM     C   D   RPS   V   L
Sbjct: 223 D----AVYRLM---ERCWEYDPGQRPSFSTVHQEL 250

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score =  103 bits (259), Expect = 1e-24
 Identities = 63/215 (29%), Positives = 113/215 (52%), Gaps = 31/215 (14%)

Query: 358 QKLGQGGFGGVYKGFF-----RETNSYIAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNL 411
           ++LG+G FG VYKG       R + + +A+K + +    +  +E+  E +++S L+H N+
Sbjct: 11  EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNI 70

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFK----------------ENSLLTWEFRYKI 455
           V LLG C +++   +++E++ +G L   L +                ++SL   +F   I
Sbjct: 71  VCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDF-LHI 129

Query: 456 AQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV---EHAKGSQTT 512
           A  +A+G+ YL        VHRD+ + N ++      KI DFGL+R +   ++ +    +
Sbjct: 130 AIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKS 186

Query: 513 VLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
           +L   + +M PE    GK + ESD++SFG+V  EI
Sbjct: 187 LLP--VRWMPPEAILYGKFTTESDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score =  103 bits (257), Expect = 1e-24
 Identities = 68/198 (34%), Positives = 107/198 (54%), Gaps = 8/198 (4%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           +KLG G FG V+ G +   N+ +AVK +  G+    + +  E +I+ +LRH  LVQL   
Sbjct: 12  KKLGNGQFGEVWMGTW-NGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAV 69

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
             E+  + +V E+M  GSL   L   E   L       +A  +A+G+ Y++       +H
Sbjct: 70  VSEEP-IYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIH 125

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           RD++S+NI++      KI DFGLARL+E  + +        + + APE A  G+ + +SD
Sbjct: 126 RDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 185

Query: 537 VYSFGIVALEIAC-GRKP 553
           V+SFGI+  E+   GR P
Sbjct: 186 VWSFGILLTELVTKGRVP 203

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score =  103 bits (258), Expect = 2e-24
 Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 57/294 (19%)

Query: 358 QKLGQGGFGGV-----YKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLV 412
           ++LG+G FG V     Y     +    +AVK +   S    K++  E ++++ L+H ++V
Sbjct: 11  RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIV 70

Query: 413 QLLGWCHEKKELLLVYEFMPNGSL---------DSHLFKEN---SLLTWEFRYKIAQDLA 460
           +  G C E   L++V+E+M +G L         D+ L  E    + LT      IAQ +A
Sbjct: 71  KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIA 130

Query: 461 SGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV---EHAKGSQTTVLAGT 517
           +G++YL     Q  VHRD+ + N ++  N   KIGDFG++R V   ++ +    T+L   
Sbjct: 131 AGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP-- 185

Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNG 576
           + +M PE     K + ESDV+S G+V  EI   G++P                W    N 
Sbjct: 186 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP----------------WYQLSNN 229

Query: 577 KLLEAVD-------PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
           +++E +        PR C     +++  LM+ G W   P  ++R +I++ IH L
Sbjct: 230 EVIECITQGRVLQRPRTCP----KEVYDLML-GCWQREP--HMRLNIKE-IHSL 275

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score =  102 bits (257), Expect = 3e-24
 Identities = 85/279 (30%), Positives = 130/279 (46%), Gaps = 33/279 (11%)

Query: 355 NDD----QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI-KEYASEVKIISRLRHR 409
           N+D      LG G  G V K     T + +A K V  G+K  + K+   E++I+   R  
Sbjct: 4   NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSP 63

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
            +V   G    +  + +  EFM  GSLD  ++K+   +  E   KIA  +  GL YL   
Sbjct: 64  YIVSFYGAFLNENNICMCMEFMDCGSLDR-IYKKGGPIPVEILGKIAVAVVEGLTYLYNV 122

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPECATT 528
               ++HRDIK SNI+++S    K+ DFG++  L+     + T V  GT  YM+PE    
Sbjct: 123 HR--IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--ADTFV--GTSTYMSPERIQG 176

Query: 529 GKASKESDVYSFGIVALEIACGRKPI--NPKAPQGQVS------LLQWVWDLYGNGKLLE 580
           GK + +SDV+S GI  +E+A G+ P   +     GQ        LLQ         ++++
Sbjct: 177 GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQ---------QIVQ 227

Query: 581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQV 619
              PRL    D  +  R  +    C   D   RP+ +Q+
Sbjct: 228 EPPPRLPSS-DFPEDLRDFVDA--CLLKDPTERPTPQQL 263

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score =  102 bits (255), Expect = 3e-24
 Identities = 63/198 (31%), Positives = 109/198 (55%), Gaps = 8/198 (4%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           +KLG G FG V+ G++   ++ +A+K + QGS    + + +E  ++ +L+H  LV+L   
Sbjct: 12  KKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMS-PEAFLAEANLMKQLQHPRLVRLYAV 69

Query: 418 CHEKKELLLVYEFMPNGSLDSHL-FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
              ++ + ++ E+M NGSL   L   E   LT      +A  +A G+ +++    +  +H
Sbjct: 70  V-TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER---KNYIH 125

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           RD++++NI++      KI DFGLARL+E  + +        + + APE    G  + +SD
Sbjct: 126 RDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 185

Query: 537 VYSFGIVALEIAC-GRKP 553
           V+SFGI+  EI   GR P
Sbjct: 186 VWSFGILLTEIVTYGRIP 203

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score =  102 bits (255), Expect = 4e-24
 Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 33/236 (13%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN 410
            ++  +   LG+G +G VY      T   IA+K + +   + ++    E+ + S L+HRN
Sbjct: 7   YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRN 66

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHL--------FKENSLLTWEFRYKIAQDLASG 462
           +VQ LG   E     +  E +P GSL + L          E +++ +       + +  G
Sbjct: 67  IVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFY------TKQILEG 120

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNA-KIGDFG----LARLVEHAKGSQTTVLAGT 517
           L YL    +  +VHRDIK  N+++++     KI DFG    LA +        T    GT
Sbjct: 121 LKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI-----NPCTETFTGT 172

Query: 518 MGYMAPECATTGKA--SKESDVYSFGIVALEIACGRKPI----NPKAPQGQVSLLQ 567
           + YMAPE    G       +D++S G   +E+A G+ P      P+A   +V + +
Sbjct: 173 LQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK 228

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score =  101 bits (252), Expect = 6e-24
 Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 15/204 (7%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRV-----SQGSKQGIKEYASEVKIISRLRHRNLVQL 414
           LG+G FG VY  +  +T   +AVK+V     SQ + + +     E++++  LRH  +VQ 
Sbjct: 10  LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQY 69

Query: 415 LGWC---HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
            G C    E+K+L +  E+MP GS+   L K    LT     +  + +  G+ YL     
Sbjct: 70  YG-CLRDPEEKKLSIFVEYMPGGSIKDQL-KAYGALTENVTRRYTRQILQGVSYLHS--- 124

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE--HAKGSQTTVLAGTMGYMAPECATTG 529
             +VHRDIK +NI+ DS  N K+GDFG ++ ++     G+    + GT  +M+PE  +  
Sbjct: 125 NMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGE 184

Query: 530 KASKESDVYSFGIVALEIACGRKP 553
              +++DV+S     +E+   + P
Sbjct: 185 GYGRKADVWSVACTVVEMLTEKPP 208

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score =  100 bits (251), Expect = 9e-24
 Identities = 62/202 (30%), Positives = 110/202 (54%), Gaps = 6/202 (2%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           ++LG G FG V+ G +R     +A+K +++G+    +++  E K++ +L H  LVQL G 
Sbjct: 10  KELGSGQFGVVHLGKWRAQIK-VAIKAINEGAMSE-EDFIEEAKVMMKLSHPKLVQLYGV 67

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
           C ++K L +V EFM NG L ++L +    L+ +    + QD+  G+ YL+       +HR
Sbjct: 68  CTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHR 124

Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDV 537
           D+ + N ++ S    K+ DFG+ R V   + + ++     + +  PE     K S +SDV
Sbjct: 125 DLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDV 184

Query: 538 YSFGIVALEIAC-GRKPINPKA 558
           +SFG++  E+   G+ P   K+
Sbjct: 185 WSFGVLMWEVFTEGKMPFEKKS 206

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score =  101 bits (253), Expect = 1e-23
 Identities = 79/297 (26%), Positives = 142/297 (47%), Gaps = 44/297 (14%)

Query: 358 QKLGQGGFGGVYKG---FFRETNS--YIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLV 412
           ++LG+G FG V+         T     +AVK +   +    K++  E ++++ L+H ++V
Sbjct: 11  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 70

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHL---------------FKENSLLTWEFRYKIAQ 457
           +  G C +   L++V+E+M +G L+  L                +    L       IA 
Sbjct: 71  KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 130

Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV---EHAKGSQTTVL 514
            +ASG++YL     Q  VHRD+ + N ++ +N   KIGDFG++R V   ++ +    T+L
Sbjct: 131 QIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 187

Query: 515 AGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLY 573
              + +M PE     K + ESDV+SFG++  EI   G++P    +    +  +       
Sbjct: 188 P--IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECIT------ 239

Query: 574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR-PSIRQVIHVLNFEAPL 629
             G++LE   PR+C     +++  +M+ G W   P + L    I +++H L    P+
Sbjct: 240 -QGRVLER--PRVCP----KEVYDIML-GCWQREPQQRLNIKEIYKILHALGKATPI 288

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score =  100 bits (249), Expect = 2e-23
 Identities = 88/277 (31%), Positives = 133/277 (48%), Gaps = 34/277 (12%)

Query: 348 ALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR 407
           AL   +    Q +G+G FG V  G +R     +AVK +   +    + + +E  ++++LR
Sbjct: 2   ALNMKELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDATA--QAFLAEASVMTQLR 57

Query: 408 HRNLVQLLG-WCHEKKELLLVYEFMPNGSLDSHL-FKENSLLTWEFRYKIAQDLASGLLY 465
           H NLVQLLG    EK  L +V E+M  GSL  +L  +  S+L  +   K + D+   + Y
Sbjct: 58  HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 117

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           L+       VHRD+ + N+++  +  AK+ DFGL +  E +    T  L   + + APE 
Sbjct: 118 LE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLP--VKWTAPEA 170

Query: 526 ATTGKASKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD- 583
               K S +SDV+SFGI+  EI + GR P  P+ P      L+ V      G  ++A D 
Sbjct: 171 LREKKFSTKSDVWSFGILLWEIYSFGRVPY-PRIP------LKDVVPRVEKGYKMDAPDG 223

Query: 584 -PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQV 619
            P +  D   Q           C H D   RPS  Q+
Sbjct: 224 CPPVVYDVMKQ-----------CWHLDAATRPSFLQL 249

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score =   99 bits (249), Expect = 2e-23
 Identities = 68/225 (30%), Positives = 115/225 (51%), Gaps = 26/225 (11%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQ----GSKQG--IKEYASEVKIISRLRHRNL 411
           Q+LG G F   Y+    +T + +AVK+V+      S+Q   ++    E+++++RL H ++
Sbjct: 6   QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHI 65

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLASGLLYL 466
           +++LG   E     L  E+M  GS+   L     FKE  ++         + L  GL YL
Sbjct: 66  IRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVII------NYTEQLLRGLSYL 119

Query: 467 QEEWEQCVVHRDIKSSNIMLDSN-FNAKIGDFGLA-RLVEHAKGS---QTTVLAGTMGYM 521
            E     ++HRD+K +N+++DS     +I DFG A RL     G+   Q  +L GT+ +M
Sbjct: 120 HENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLL-GTIAFM 175

Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL 566
           APE     +  +  DV+S G V +E+A  + P N +     ++L+
Sbjct: 176 APEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALI 220

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score =   99 bits (249), Expect = 2e-23
 Identities = 87/288 (30%), Positives = 134/288 (46%), Gaps = 45/288 (15%)

Query: 360 LGQGGFGGVYKGFFR------ETNSYIAVKRVSQGSK-QGIKEYASEVKIISRLRHRNLV 412
           LG G FG VY+G              +AVK + +G+  Q  KE+  E  ++S   H N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFK------ENSLLTWEFRYKIAQDLASGLLYL 466
           +LLG C   +   ++ E M  G L S+L           LLT +    I  D+A G +YL
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL 122

Query: 467 QEEWEQCVVHRDIKSSNIML-----DSNFNAKIGDFGLARLV----EHAKGSQTTVLAGT 517
           +   +   +HRD+ + N ++     D++   KIGDFGLAR +     + K  +  +    
Sbjct: 123 E---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLL---P 176

Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNG 576
           + +MAPE    GK + +SDV+SFG++  EI   G++P           +LQ V      G
Sbjct: 177 VRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPY---PALNNQEVLQHV----TAG 229

Query: 577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
             L+   P  C D    +I +LM    W   P E  RP+  ++  +L 
Sbjct: 230 GRLQK--PENCPD----KIYQLMTN-CWAQDPSE--RPTFDRIQEILQ 268

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 98.7 bits (246), Expect = 7e-23
 Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 27/214 (12%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRV----------SQGSKQGIKEYASEVKIISRLR 407
           + +G+G +G VY      T   +AVK+V              K  +K   SE++ +  L 
Sbjct: 7   ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD 66

Query: 408 HRNLVQLLGWCHEKKELLLVY-EFMPNGSLDSHLFK----ENSLLTWEFRYKIAQDLASG 462
           H N+VQ LG     +E L ++ E++P GS+ S L      E  L+    R+   Q L  G
Sbjct: 67  HLNIVQYLG-FETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLV----RFFTEQVL-EG 120

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYM 521
           L YL     + ++HRD+K+ N+++D++   KI DFG+++  +    + Q   + G++ +M
Sbjct: 121 LAYLHS---KGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWM 177

Query: 522 APECATTGKA--SKESDVYSFGIVALEIACGRKP 553
           APE   +     S + D++S G V LE+  GR+P
Sbjct: 178 APEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRP 211

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 98.1 bits (245), Expect = 7e-23
 Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 7/199 (3%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           Q++G G +G VYK     T   +A+K +        +    E+ ++   RH N+V   G 
Sbjct: 9   QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGS 68

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
              + +L +V E+   GSL          L+      + ++   GL YL    E   +HR
Sbjct: 69  YLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLH---ETGKIHR 125

Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECA---TTGKASKE 534
           DIK +NI+L  + + K+ DFG++  +      + + + GT  +MAPE A     G    +
Sbjct: 126 DIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFI-GTPYWMAPEVAAVERKGGYDGK 184

Query: 535 SDVYSFGIVALEIACGRKP 553
            D+++ GI A+E+A  + P
Sbjct: 185 CDIWALGITAIELAELQPP 203

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 97.9 bits (244), Expect = 7e-23
 Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 39/279 (13%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYA-SEVKIISRLRHRN 410
           DF   +KLG+G +G VYK      N + A+K V  GS  Q  +E A +E++I++ + H N
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 411 LVQLLGWCHEK----KELLLVYEFMPNGSLDSHLFKENS---LLTWEFRYKIAQDLASGL 463
           ++       E      +L +V E+ P G L   + K      L+  +  ++I   L  GL
Sbjct: 61  IISY----KEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGL 116

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAP 523
             L E   Q ++HRD+KS+NI+L +N   KIGD G++++    K +      GT  YMAP
Sbjct: 117 QALHE---QKILHRDLKSANILLVANDLVKIGDLGISKV---LKKNMAKTQIGTPHYMAP 170

Query: 524 ECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD 583
           E       S +SD++S G +  E+A    P   ++ Q          DL    K+     
Sbjct: 171 EVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ----------DLR--YKVQRGKY 218

Query: 584 PRLCRDF--DGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
           P +   +  D Q   R              LRP+  +++
Sbjct: 219 PPIPPIYSQDLQNFIR------SMLQVKPKLRPNCDKIL 251

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 98.7 bits (246), Expect = 7e-23
 Identities = 83/287 (28%), Positives = 131/287 (45%), Gaps = 44/287 (15%)

Query: 360 LGQGGFGGVYKGFFRETNSY-----IAVK-RVSQGSKQGIKEYASEVKIISRLRHRNLVQ 413
           LG G FG VY+G +R  +       +AVK      S+Q   ++  E  I+S+  H+N+V+
Sbjct: 14  LGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVR 73

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKEN-------SLLTWEFRYKIAQDLASGLLYL 466
           L+G   E+    ++ E M  G L S L +EN       S LT +     A+D+A G  YL
Sbjct: 74  LIGVSFERLPRFILLELMAGGDLKSFL-RENRPRPERPSSLTMKDLLFCARDVAKGCKYL 132

Query: 467 QEEWEQCVVHRDIKSSNIMLDSNFN---AKIGDFGLARLVEHA----KGSQTTVLAGTMG 519
           +E      +HRDI + N +L        AKI DFG+AR +  A    KG +  +    + 
Sbjct: 133 EENH---FIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAML---PIK 186

Query: 520 YMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKL 578
           +M PE    G  + ++DV+SFG++  EI + G  P  P     +V        + G G+L
Sbjct: 187 WMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPY-PGRTNQEVMEF-----VTGGGRL 240

Query: 579 LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF 625
                P+ C       + R+M     C       RP+   ++  + +
Sbjct: 241 DP---PKGCPG----PVYRIMTD---CWQHTPEDRPNFATILERIQY 277

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 98.4 bits (245), Expect = 8e-23
 Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 19/217 (8%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKEYAS-------EVKIISRLRHRN 410
           +G G FG VY G    +   +AVK+V     S        S       E+ ++  L+H N
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           +VQ LG   +   L +  E++P GS+ + L    +      R  + Q L  GL YL    
Sbjct: 68  IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQIL-KGLNYLHN-- 124

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH-----AKGSQTTVLAGTMGYMAPEC 525
            + ++HRDIK +NI++D+    KI DFG+++ +E              L G++ +MAPE 
Sbjct: 125 -RGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEV 183

Query: 526 ATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ 562
                 ++++D++S G + +E+  G+ P  P   Q Q
Sbjct: 184 VKQTSYTRKADIWSLGCLVVEMLTGKHPF-PDCTQLQ 219

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 98.3 bits (245), Expect = 9e-23
 Identities = 62/198 (31%), Positives = 92/198 (46%), Gaps = 9/198 (4%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLG 416
           LG+GGFG V     + T    A K++ +     ++G +   +E KI+ ++  R +V L  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKI-AQDLASGLLYLQEEWEQCVV 475
               K +L LV   M  G L  H++        E R    A  +  GL +L +     +V
Sbjct: 61  AFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR---IV 117

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES 535
           +RD+K  N++LD + N +I D GLA  VE   G +    AGT GYMAPE           
Sbjct: 118 YRDLKPENVLLDDHGNVRISDLGLA--VELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSV 175

Query: 536 DVYSFGIVALEIACGRKP 553
           D ++ G    E+  GR P
Sbjct: 176 DWFALGCTLYEMIAGRSP 193

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 97.8 bits (243), Expect = 1e-22
 Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 8/199 (4%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLG 416
           D KLGQG FG V+ G +  T   +A+K +  G+    + +  E +I+ +LRH  LV L  
Sbjct: 11  DVKLGQGCFGEVWMGTWNGTTK-VAIKTLKPGTMMP-EAFLQEAQIMKKLRHDKLVPLYA 68

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
              E+  + +V EFM  GSL   L + +   L       +A  +A G+ Y++       +
Sbjct: 69  VVSEEP-IYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER---MNYI 124

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES 535
           HRD++++NI++  N   KI DFGLARL+E  + +        + + APE A  G+ + +S
Sbjct: 125 HRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 184

Query: 536 DVYSFGIVALEIAC-GRKP 553
           DV+SFGI+  E+   GR P
Sbjct: 185 DVWSFGILLTELVTKGRVP 203

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 97.2 bits (242), Expect = 1e-22
 Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 18/221 (8%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYA-SEVKIISRLRHRN 410
           DF    K+G+G FG V+K   +      A+K++      +  +E A  E +++++L    
Sbjct: 1   DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEE 469
           +++      +K +L +V E+  NG L   L  +    L  +  ++    +  GL +L   
Sbjct: 61  IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS- 119

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA----GTMGYMAPEC 525
             + ++HRDIKS N+ LD+  N KIGD G+A+L+     S  T  A    GT  Y++PE 
Sbjct: 120 --KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLL-----SDNTNFANTIVGTPYYLSPEL 172

Query: 526 ATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL 566
                 +++SDV++ G+V  E   G+ P +      Q +L+
Sbjct: 173 CEDKPYNEKSDVWALGVVLYECCTGKHPFD---ANNQGALI 210

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 97.1 bits (241), Expect = 2e-22
 Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 15/204 (7%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRV-----SQGSKQGIKEYASEVKIISRLRHRNLVQL 414
           LGQG FG VY  +  +T   +A K+V     S  + + +     E++++  L+H  +VQ 
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQY 69

Query: 415 LGWC---HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
            G C     +K L +  E+MP GS+   L K    LT     K  + +  G+ YL     
Sbjct: 70  YG-CLRDRAEKTLTIFMEYMPGGSVKDQL-KAYGALTESVTRKYTRQILEGMSYLHS--- 124

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH--AKGSQTTVLAGTMGYMAPECATTG 529
             +VHRDIK +NI+ DS  N K+GDFG ++ ++     G+    + GT  +M+PE  +  
Sbjct: 125 NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGE 184

Query: 530 KASKESDVYSFGIVALEIACGRKP 553
              +++DV+S G   +E+   + P
Sbjct: 185 GYGRKADVWSLGCTVVEMLTEKPP 208

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 96.6 bits (240), Expect = 2e-22
 Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 13/203 (6%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRV-----SQGSKQGIKEYASEVKIISRLRHRNLVQL 414
           LGQG FG VY  +  +T   +AVK+V     S  + + +     E++++  L H  +VQ 
Sbjct: 10  LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQY 69

Query: 415 LGWCHEKKE--LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
            G   +  E  L +  E MP GS+   L K    LT     K  + +  G+ YL      
Sbjct: 70  YGCLRDPMERTLSIFMEHMPGGSIKDQL-KSYGALTENVTRKYTRQILEGVSYLHS---N 125

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA--KGSQTTVLAGTMGYMAPECATTGK 530
            +VHRDIK +NI+ DS  N K+GDFG ++ ++     G+    + GT  +M+PE  +   
Sbjct: 126 MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEG 185

Query: 531 ASKESDVYSFGIVALEIACGRKP 553
             +++D++S G   +E+   + P
Sbjct: 186 YGRKADIWSVGCTVVEMLTEKPP 208

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 96.7 bits (241), Expect = 4e-22
 Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 20/214 (9%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRV-SQGSKQGIKEYASEVKIISRLRH-R 409
            D  D  ++G+G FG V K   + + + +AVKR+ S   ++  K    ++ ++ R     
Sbjct: 4   EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCP 63

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK-----ENSLLTWEFRYKIAQDLASGLL 464
            +V+  G    + +  +  E M + SLD   +K       S++  E   KIA      L 
Sbjct: 64  YIVKFYGALFREGDCWICMELM-DISLDK-FYKYVYEVLKSVIPEEILGKIAVATVKALN 121

Query: 465 YLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEH-AKGSQTTVLAGTMGYMA 522
           YL+EE +  ++HRD+K SNI+LD N N K+ DFG++ +LV+  AK    T  AG   YMA
Sbjct: 122 YLKEELK--IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK----TRDAGCRPYMA 175

Query: 523 PECATTGKASK---ESDVYSFGIVALEIACGRKP 553
           PE             SDV+S GI   E+A G+ P
Sbjct: 176 PERIDPSARDGYDVRSDVWSLGITLYEVATGKFP 209

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 95.5 bits (238), Expect = 5e-22
 Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 22/209 (10%)

Query: 358 QKLGQGGFGGVYKGFFRETNSY---IAVKRVSQGSKQGI-KEYASEVKIISRLRHRNLVQ 413
           +KLG G FG V +G +  +      +AVK +       I  ++  E  I+  L H NL++
Sbjct: 1   KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIR 60

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKEN------SLLTWEFRYKIAQDLASGLLYLQ 467
           L G       L++V E  P GSL   L K+       S L  ++  +IA    +G+ YL+
Sbjct: 61  LYGVVLTHP-LMMVTELAPLGSLLDRLRKDALGHFLISTL-CDYAVQIA----NGMRYLE 114

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR--LVEHAKGSQTTVLAGTMGYMAPEC 525
               +  +HRD+ + NI+L S+   KIGDFGL R              L     + APE 
Sbjct: 115 S---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPES 171

Query: 526 ATTGKASKESDVYSFGIVALEI-ACGRKP 553
             T   S  SDV+ FG+   E+   G +P
Sbjct: 172 LRTRTFSHASDVWMFGVTLWEMFTYGEEP 200

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 96.0 bits (239), Expect = 5e-22
 Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 9/210 (4%)

Query: 349 LATNDFNDDQKLGQGGFGGVYKGFFRETNS---YIAVKRVSQGSKQGIKE-YASEVKIIS 404
           +   D    + +G+G FG VY+G +    +    +AVK     +   ++E +  E  I+ 
Sbjct: 3   IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMR 62

Query: 405 RLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLL 464
           +  H ++V+L+G    +  + +V E  P G L S+L      L        +  L++ L 
Sbjct: 63  QFDHPHIVKLIGVI-TENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALA 121

Query: 465 YLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE 524
           YL  E ++ V HRDI + N+++ S    K+GDFGL+R +E     + +     + +MAPE
Sbjct: 122 YL--ESKRFV-HRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPE 178

Query: 525 CATTGKASKESDVYSFGIVALEI-ACGRKP 553
                + +  SDV+ FG+   EI   G KP
Sbjct: 179 SINFRRFTSASDVWMFGVCMWEILMLGVKP 208

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 96.5 bits (241), Expect = 5e-22
 Identities = 71/209 (33%), Positives = 103/209 (49%), Gaps = 19/209 (9%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG----SKQGIKEYASEVKIISRLR 407
           +DF   + LG G FG V     + +  Y A+K +S+      KQ ++   +E +I+  +R
Sbjct: 1   DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQ-VEHVLNEKRILQSIR 59

Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
           H  LV L G   +   L LV E++P G L SHL K         R+  AQ +   L YL 
Sbjct: 60  HPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQ-VVLALEYLH 118

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE--- 524
                 +V+RD+K  N++LDS+   KI DFG A+ V+    + T  L GT  Y+APE   
Sbjct: 119 SL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVK--GRTYT--LCGTPEYLAPEIIL 171

Query: 525 CATTGKASKESDVYSFGIVALEIACGRKP 553
               GKA    D ++ GI+  E+  G  P
Sbjct: 172 SKGYGKA---VDWWALGILIYEMLAGYPP 197

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 95.3 bits (237), Expect = 7e-22
 Identities = 70/266 (26%), Positives = 129/266 (48%), Gaps = 26/266 (9%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           ++LG G FG V  G +R     +A+K + +GS     E+  E K++ +L H  LVQL G 
Sbjct: 10  KELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSE-DEFIEEAKVMMKLSHEKLVQLYGV 67

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
           C +++ + +V E+M NG L ++L +           ++ +D+  G+ YL+ +     +HR
Sbjct: 68  CTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ---FIHR 124

Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDV 537
           D+ + N ++D     K+ DFGL+R V   + + +      + +  PE     K S +SDV
Sbjct: 125 DLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDV 184

Query: 538 YSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDGQQ 594
           ++FG++  E+ + G+ P                ++ + N + +E V    RL R      
Sbjct: 185 WAFGVLMWEVYSLGKMP----------------YERFNNSETVEKVSQGLRLYR--PHLA 226

Query: 595 IERLMIVGLWCAHPDENLRPSIRQVI 620
            E++  +   C H     RP+ +Q++
Sbjct: 227 SEKVYAIMYSCWHEKAEERPTFQQLL 252

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 94.7 bits (236), Expect = 1e-21
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 26/217 (11%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYASEVKIISRLRHRN 410
           +D+   + +G G    VY       N  +A+KR+  +  +  + E   EV+ +S+  H N
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPN 60

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSL--------DSHLFKENSLLTWEFRYKIAQDLASG 462
           +V+         EL LV  ++  GSL              E  + T      + +++  G
Sbjct: 61  VVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIAT------VLKEVLKG 114

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG----LARLVEHAKGSQTTVLAGTM 518
           L YL        +HRDIK+ NI+L  + + KI DFG    LA   +  +  + T   GT 
Sbjct: 115 LEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTF-VGTP 170

Query: 519 GYMAPECAT--TGKASKESDVYSFGIVALEIACGRKP 553
            +MAPE      G   K +D++SFGI A+E+A G  P
Sbjct: 171 CWMAPEVMEQVHGYDFK-ADIWSFGITAIELATGAAP 206

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 95.1 bits (236), Expect = 1e-21
 Identities = 63/218 (28%), Positives = 112/218 (51%), Gaps = 28/218 (12%)

Query: 359 KLGQGGFGGVYKG-----FFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQ 413
           +LG+G FG V+          +    +AVK + + S+   +++  E ++++ L+H+++V+
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71

Query: 414 LLGWCHEKKELLLVYEFMPNGSL---------DSHLFKENSL-----LTWEFRYKIAQDL 459
             G C E + LL+V+E+M +G L         D+ +           LT      IA  +
Sbjct: 72  FYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQI 131

Query: 460 ASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV---EHAKGSQTTVLAG 516
           ASG++YL        VHRD+ + N ++      KIGDFG++R +   ++ +    T+L  
Sbjct: 132 ASGMVYLA---SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP- 187

Query: 517 TMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKP 553
            + +M PE     K + ESD++SFG+V  EI   G++P
Sbjct: 188 -IRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQP 224

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 95.4 bits (237), Expect = 1e-21
 Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 43/247 (17%)

Query: 348 ALATNDFNDDQKLGQGGFGGVYKGFFRETNSYI--AVKRVSQ-GSKQGIKEYASEVKIIS 404
            L  ND      +G+G FG V K   ++    +  A+KR+ +  SK   +++A E++++ 
Sbjct: 3   VLEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 62

Query: 405 RL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKEN---------------SLLT 448
           +L  H N++ LLG C  +  L L  E+ P+G+L   L K                 S L+
Sbjct: 63  KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 122

Query: 449 WEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG 508
            +     A D+A G+ YL ++     +HRD+ + NI++  N+ AKI DFGL+R       
Sbjct: 123 SQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR------- 172

Query: 509 SQTTVLAGTMG-----YMAPECATTGKASKESDVYSFGIVALEIA-------CGRK--PI 554
            Q   +  TMG     +MA E       +  SDV+S+G++  EI        CG     +
Sbjct: 173 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL 232

Query: 555 NPKAPQG 561
             K PQG
Sbjct: 233 YEKLPQG 239

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 93.7 bits (233), Expect = 3e-21
 Identities = 78/287 (27%), Positives = 128/287 (44%), Gaps = 41/287 (14%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRV-------SQGSKQGIKEYASEVKII 403
             +F  ++K+G+G F  VYK         +A+K+V       ++  +  +KE    + ++
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKE----IDLL 56

Query: 404 SRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD---SHLFKENSLLTWEFRYKIAQDLA 460
            +L H N+++ L    E  EL +V E    G L     H  K+  L+     +K    L 
Sbjct: 57  KQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLC 116

Query: 461 SGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV---LAGT 517
           S L ++     + ++HRDIK +N+ + +    K+GD GL R       S+TT    L GT
Sbjct: 117 SALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFS----SKTTAAHSLVGT 169

Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKPI-NPKAPQGQVSLLQWVWDLYGNG 576
             YM+PE       + +SD++S G +  E+A  + P    K             +LY   
Sbjct: 170 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------------NLYSLC 217

Query: 577 KLLEAVD-PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHV 622
           K +E  D P L  D   +++  L+     C +PD   RP I  V+ V
Sbjct: 218 KKIEKCDYPPLPADHYSEELRDLVSR---CINPDPEKRPDISYVLQV 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 94.1 bits (234), Expect = 3e-21
 Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 35/218 (16%)

Query: 360 LGQGGFGGVYKG-----FFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQ 413
           +GQG FG V++         E  + +AVK + +  S     ++  E  +++   H N+V+
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSL----------------LTWEFR 452
           LLG C   K + L++E+M  G L+  L       + SL                L+   +
Sbjct: 73  LLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQ 132

Query: 453 YKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR---LVEHAKGS 509
             IA+ +A+G+ YL E   +  VHRD+ + N ++  N   KI DFGL+R     ++ K S
Sbjct: 133 LCIAKQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAS 189

Query: 510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
           +   +   + +M PE     + + ESDV+++G+V  EI
Sbjct: 190 ENDAIP--IRWMPPESIFYNRYTTESDVWAYGVVLWEI 225

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 93.5 bits (233), Expect = 4e-21
 Identities = 72/220 (32%), Positives = 105/220 (47%), Gaps = 22/220 (10%)

Query: 350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RH 408
            T  F   + +G+G +G VYK   ++T   +A+K +    +   +E   E  I+ +   H
Sbjct: 4   PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIK-IMDIIEDEEEEIKEEYNILRKYSNH 62

Query: 409 RNLVQLLGWCHEKK-------ELLLVYEFMPNGS---LDSHLFKENSLLTWEFRYKIAQD 458
            N+    G    KK       +L LV E    GS   L   L K+   L  E+   I ++
Sbjct: 63  PNIATFYG-AFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRE 121

Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM 518
              GL YL E     V+HRDIK  NI+L  N   K+ DFG++  ++   G + T + GT 
Sbjct: 122 TLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFI-GTP 177

Query: 519 GYMAPE---CATTGKAS--KESDVYSFGIVALEIACGRKP 553
            +MAPE   C     AS    SDV+S GI A+E+A G+ P
Sbjct: 178 YWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPP 217

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 92.7 bits (230), Expect = 5e-21
 Identities = 61/201 (30%), Positives = 105/201 (52%), Gaps = 10/201 (4%)

Query: 359 KLGQGGFGGVYKGFFRETNSYI--AVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLL 415
           +LG G FG V KG ++     I  A+K +   +++ ++ E   E +I+ +L +  +V+++
Sbjct: 2   ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMI 61

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
           G C E + L+LV E    G L+  L  +   +T     ++   ++ G+ YL+    +  V
Sbjct: 62  GVC-EAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEG---KNFV 117

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASK 533
           HRD+ + N++L +   AKI DFGL++ +           AG   + + APEC    K S 
Sbjct: 118 HRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSS 177

Query: 534 ESDVYSFGIVALE-IACGRKP 553
            SDV+S+GI   E  + G+KP
Sbjct: 178 RSDVWSYGITMWEAFSYGQKP 198

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 93.5 bits (232), Expect = 5e-21
 Identities = 87/290 (30%), Positives = 134/290 (46%), Gaps = 37/290 (12%)

Query: 360 LGQGGFGGV----YKGFFRETNSYIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL 414
           LG+G FG V    Y      T   +AVK +   S    I +   E++I+  L H N+V+ 
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 415 LGWCHEK--KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
            G C E     + L+ EF+P+GSL  +L +  + +  + + K A  +  G+ YL     +
Sbjct: 72  KGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGS---R 128

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV--LAGTMGYMAPECATTGK 530
             VHRD+ + N++++S    KIGDFGL + +E  K   T    L   + + APEC    K
Sbjct: 129 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSK 188

Query: 531 ASKESDVYSFGIVALEIA--CGR---------KPINPKAPQGQVSLLQWVWDLYGNGKLL 579
               SDV+SFG+   E+   C           K I P    GQ+++ + V  L   GK L
Sbjct: 189 FYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPT--HGQMTVTRLVRVLE-EGKRL 245

Query: 580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPL 629
               P  C +    ++ +LM    W   P +  R + + +I    FEA L
Sbjct: 246 PR--PPNCPE----EVYQLM-RKCWEFQPSK--RTTFQNLIE--GFEAIL 284

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 92.3 bits (229), Expect = 6e-21
 Identities = 66/210 (31%), Positives = 114/210 (54%), Gaps = 17/210 (8%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLG- 416
           + +G+G FG V +G +  T   +AVK +        + +  E  ++++L H+NLV+LLG 
Sbjct: 12  EIIGEGEFGAVLQGEY--TGQKVAVKNIK--CDVTAQAFLEETAVMTKLHHKNLVRLLGV 67

Query: 417 WCHEKKELLLVYEFMPNGSLDSHL-FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
             H    L +V E M  G+L + L  +  +L++     + + D+A G+ YL+    + +V
Sbjct: 68  ILHNG--LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES---KKLV 122

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES 535
           HRD+ + NI++  +  AK+ DFGLAR+   + G   + L   + + APE     K S +S
Sbjct: 123 HRDLAARNILVSEDGVAKVSDFGLARV--GSMGVDNSKLP--VKWTAPEALKHKKFSSKS 178

Query: 536 DVYSFGIVALEI-ACGRKPINPKAPQGQVS 564
           DV+S+G++  E+ + GR P  PK    +V 
Sbjct: 179 DVWSYGVLLWEVFSYGRAPY-PKMSLKEVK 207

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 92.7 bits (230), Expect = 7e-21
 Identities = 77/267 (28%), Positives = 130/267 (48%), Gaps = 27/267 (10%)

Query: 360 LGQGGFGGVYKGFF-RETNSY---IAVKRV-SQGSKQGIKEYASEVKIISRLRHRNLVQL 414
           LG G FG V+KG +  E +S    +A+K +  +  +Q  +E    +  +  L H  +V+L
Sbjct: 15  LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL 74

Query: 415 LGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCV 474
           LG C     L LV +  P GSL  H+ +    L  +        +A G+ YL+E     +
Sbjct: 75  LGIC-PGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEE---HRM 130

Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLARLV-EHAKGSQTTVLAGTMGYMAPECATTGKASK 533
           VHR++ + NI+L S+   +I DFG+A L+    K    +     + +MA E    G+ + 
Sbjct: 131 VHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTH 190

Query: 534 ESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDG 592
           +SDV+S+G+   E+ + G +P     P         V DL   G+ L    P++C     
Sbjct: 191 QSDVWSYGVTVWEMMSYGAEPYAGMRPHE-------VPDLLEKGERLA--QPQIC----- 236

Query: 593 QQIERLMIVGLWCAHPDENLRPSIRQV 619
             I+  M++ + C   DEN+RP+ +++
Sbjct: 237 -TIDVYMVM-VKCWMIDENVRPTFKEL 261

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 92.0 bits (228), Expect = 1e-20
 Identities = 54/191 (28%), Positives = 102/191 (53%), Gaps = 6/191 (3%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           +KLG G FG V+ G++  +   +AVK +  G+   ++ +  E  ++  L+H  LV+L   
Sbjct: 12  KKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAV 69

Query: 418 CHEKKELLLVYEFMPNGSLDSHL-FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
             +++ + ++ E+M  GSL   L   E   +        +  +A G+ Y++    +  +H
Sbjct: 70  VTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIH 126

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           RD++++N+++  +   KI DFGLAR++E  + +        + + APE    G  + +SD
Sbjct: 127 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 186

Query: 537 VYSFGIVALEI 547
           V+SFGI+  EI
Sbjct: 187 VWSFGILLYEI 197

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 92.4 bits (229), Expect = 1e-20
 Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 20/210 (9%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWC 418
           +LG G FG VYK   +ET +  A K +   S++ +++Y  E++I++   H  +V+LLG  
Sbjct: 19  ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAF 78

Query: 419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
           +   +L ++ EF P G++D+ + + +  LT      I + +   L YL       ++HRD
Sbjct: 79  YWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLH---SMKIIHRD 135

Query: 479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT----TVLAGTMGYMAPE---CATTGKA 531
           +K+ N++L  + + K+ DFG++     AK  +T        GT  +MAPE   C T    
Sbjct: 136 LKAGNVLLTLDGDIKLADFGVS-----AKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDT 190

Query: 532 SKE--SDVYSFGIVALEIACGRKP---INP 556
             +  +D++S GI  +E+A    P   +NP
Sbjct: 191 PYDYKADIWSLGITLIEMAQIEPPHHELNP 220

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 91.2 bits (226), Expect = 2e-20
 Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 36/272 (13%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVS--QGSKQGIKEYASEVKIISRLRHRNLVQLL-G 416
           +G+G +G V     R       +K+++    S++  K    E +++S+L+H N+V     
Sbjct: 8   VGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRES 67

Query: 417 WCHEKKELLLVYEFMPNGSL-------DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
           W  E   L +V  F   G L          L  EN ++ W  +      +A  L YL E+
Sbjct: 68  WEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQ------IAMALQYLHEK 121

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG 529
               ++HRD+K+ N+ L      K+GD G+AR++E+     +T L GT  YM+PE  +  
Sbjct: 122 H---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAST-LIGTPYYMSPELFSNK 177

Query: 530 KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD 589
             + +SDV++ G    E+A  +   N K     V             +++E   P + +D
Sbjct: 178 PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVY------------RIIEGKLPPMPKD 225

Query: 590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIH 621
           +  +  E  +I  +    P++  RPS++ ++ 
Sbjct: 226 YSPELGE--LIATMLSKRPEK--RPSVKSILR 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 92.1 bits (228), Expect = 2e-20
 Identities = 66/203 (32%), Positives = 108/203 (53%), Gaps = 15/203 (7%)

Query: 360 LGQGGFGGVYKGFF----RETNSYIAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQ 413
           LG G FG VYKG +          +A+K +++  G K  + E+  E  I++ + H +LV+
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV-EFMDEALIMASMDHPHLVR 73

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC 473
           LLG C     + LV + MP+G L  ++ +    +  +        +A G++YL+E   + 
Sbjct: 74  LLGVCLSPT-IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RR 129

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM--GYMAPECATTGKA 531
           +VHRD+ + N+++ S  + KI DFGLARL+E     +     G M   +MA EC    K 
Sbjct: 130 LVHRDLAARNVLVKSPNHVKITDFGLARLLE-GDEKEYNADGGKMPIKWMALECIHYRKF 188

Query: 532 SKESDVYSFGIVALEIAC-GRKP 553
           + +SDV+S+G+   E+   G KP
Sbjct: 189 THQSDVWSYGVTIWELMTFGGKP 211

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 91.2 bits (226), Expect = 3e-20
 Identities = 76/282 (26%), Positives = 132/282 (46%), Gaps = 40/282 (14%)

Query: 358 QKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNL 411
           ++LGQG FG VY+G  +     E  + +A+K V++ +    + E+ +E  ++      ++
Sbjct: 12  RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 71

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFK---------ENSLLTWEFRYKIAQDLASG 462
           V+LLG   + +  L++ E M  G L S+L             +  + +   ++A ++A G
Sbjct: 72  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADG 131

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA----KGSQTTVLAGTM 518
           + YL        VHRD+ + N M+  +F  KIGDFG+ R +       KG +  +    +
Sbjct: 132 MAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---PV 185

Query: 519 GYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL 578
            +M+PE    G  +  SDV+SFG+V  EIA   +   P        +L++V +    G L
Sbjct: 186 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE--QPYQGMSNEQVLRFVME----GGL 239

Query: 579 LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
           L+   P  C D        L  +   C   +  +RPS  ++I
Sbjct: 240 LD--KPDNCPDM-------LFELMRMCWQYNPKMRPSFLEII 272

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 91.3 bits (227), Expect = 3e-20
 Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 9/216 (4%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNL 411
           DF    +LG G  G V K   R +   +A K +    K  I+ +   E+K++       +
Sbjct: 2   DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYI 61

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           V   G  +   E+ +  E M  GSLD  L K+   +      KI+  +  GL YL+E+ +
Sbjct: 62  VGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPENILGKISIAVLRGLTYLREKHK 120

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPECATTGK 530
             ++HRD+K SNI+++S    K+ DFG++ +L++    S      GT  YM+PE      
Sbjct: 121 --IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 174

Query: 531 ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL 566
            + +SD++S G+  +E+A GR PI P   +   ++ 
Sbjct: 175 YTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMF 210

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 90.6 bits (225), Expect = 4e-20
 Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 33/210 (15%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLVQLLG 416
           +KLG+G +  VYKG  R T   +A+K +   +++G    A  E+ ++  L+H N+V+L  
Sbjct: 6   EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHD 65

Query: 417 WCHEKKELLLVYEFMPN------------GSLDSHLFKENSLLTWEFRYKIAQDLASGLL 464
             H + +L+LV+E+M              G+LD +  K        F Y++ +    G+ 
Sbjct: 66  VIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKS-------FTYQLLK----GIA 114

Query: 465 YLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL--VEHAKGSQTTVLAGTMGYMA 522
           +  E     V+HRD+K  N++++     K+ DFGLAR   +     S   V   T+ Y A
Sbjct: 115 FCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVV---TLWYRA 168

Query: 523 PECATTGKASKES-DVYSFGIVALEIACGR 551
           P+     +    S D++S G +  E+  GR
Sbjct: 169 PDVLLGSRTYSTSIDIWSVGCIMAEMITGR 198

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 90.5 bits (225), Expect = 5e-20
 Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 33/209 (15%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLG 416
            +G+G +G V K   + T   +A+K  + S+  +   K    EVK++ +LRH N+V L  
Sbjct: 8   VVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKE 67

Query: 417 WCHEKKELLLVYEF-----------MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
               K  L LV+E+            P G L     +      W+        L   + Y
Sbjct: 68  AFRRKGRLYLVFEYVERTLLELLEASPGG-LPPDAVR---SYIWQ--------LLQAIAY 115

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE- 524
                   ++HRDIK  NI++  +   K+ DFG AR +     S  T    T  Y APE 
Sbjct: 116 CHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPEL 172

Query: 525 --CATTGKASKESDVYSFGIVALEIACGR 551
               T     K  DV++ G +  E+  G 
Sbjct: 173 LVGDT--NYGKPVDVWAIGCIMAELLDGE 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 90.7 bits (226), Expect = 5e-20
 Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 11/149 (7%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGS----KQGIKEYA-SEVKIISRLRHRNLVQ 413
           KLG+G +  VYK   +ET   +A+K++  G     K GI   A  E+K++  L+H N++ 
Sbjct: 7   KLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIG 66

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK-IAQDLASGLLYLQEEWEQ 472
           LL     K  + LV+EFM    L   + K+ S++      K        GL YL   W  
Sbjct: 67  LLDVFGHKSNINLVFEFME-TDL-EKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW-- 122

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLAR 501
            ++HRD+K +N+++ S+   K+ DFGLAR
Sbjct: 123 -ILHRDLKPNNLLIASDGVLKLADFGLAR 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 91.0 bits (226), Expect = 5e-20
 Identities = 67/207 (32%), Positives = 98/207 (47%), Gaps = 18/207 (8%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRN 410
           F D +++G G FG VY      TN  +A+K++S   KQ  +++     EV+ + +LRH N
Sbjct: 17  FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPN 76

Query: 411 LVQLLGWCHEKKELL-LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
            ++  G C+ ++    LV E+    + D     +  L   E    I      GL YL   
Sbjct: 77  TIEYKG-CYLREHTAWLVMEYCLGSASDILEVHKKPLQEVEIA-AICHGALQGLAYLHS- 133

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE---CA 526
                +HRDIK+ NI+L      K+ DFG A LV  A         GT  +MAPE     
Sbjct: 134 --HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS-----FVGTPYWMAPEVILAM 186

Query: 527 TTGKASKESDVYSFGIVALEIACGRKP 553
             G+   + DV+S GI  +E+A  RKP
Sbjct: 187 DEGQYDGKVDVWSLGITCIELA-ERKP 212

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 89.4 bits (222), Expect = 9e-20
 Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 15/201 (7%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQG-IKEYASEVKIISRLRH---RNLVQLL 415
           +G+G +G VY+G    T   +A+K ++  +    + +   EV ++S+LR     N+ +  
Sbjct: 9   IGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYY 68

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK--IAQDLASGLLYLQEEWEQC 473
           G   +   L ++ E+   GS+ + L K   +     +Y   I +++   L Y+ +     
Sbjct: 69  GSYLKGPRLWIIMEYAEGGSVRT-LMKAGPI---AEKYISVIIREVLVALKYIHKV---G 121

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA-S 532
           V+HRDIK++NI++ +  N K+ DFG+A L+      ++T   GT  +MAPE  T GK   
Sbjct: 122 VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRST-FVGTPYWMAPEVITEGKYYD 180

Query: 533 KESDVYSFGIVALEIACGRKP 553
            ++D++S GI   E+A G  P
Sbjct: 181 TKADIWSLGITIYEMATGNPP 201

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 89.8 bits (223), Expect = 9e-20
 Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 37/220 (16%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRN 410
           D+   +K+G+G +G VYKG  ++T   +A+K++   S+ +G+   A  E+ ++  L+H N
Sbjct: 1   DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPN 60

Query: 411 LVQLLGWCHEKKELLLVYEFM------------PNGSLDSHLFKENSLLTWEFRYKIAQD 458
           +V L     ++  L L++EF+                +D+ L K        + Y+I Q 
Sbjct: 61  IVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKS-------YLYQILQ- 112

Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG-- 516
              G+L+      + V+HRD+K  N+++D+    K+ DFGLAR    A G    V     
Sbjct: 113 ---GILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLAR----AFGIPVRVYTHEV 162

Query: 517 -TMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPI 554
            T+ Y APE      + S   D++S G +  E+A  +KP+
Sbjct: 163 VTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMAT-KKPL 201

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 89.7 bits (223), Expect = 9e-20
 Identities = 84/297 (28%), Positives = 136/297 (45%), Gaps = 49/297 (16%)

Query: 358 QKLGQGGFGGVY------------KGFFRETNS----YIAVKRVSQG-SKQGIKEYASEV 400
           +KLG+G FG V+            K F    N+     +AVK +    S    +++  EV
Sbjct: 11  EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEV 70

Query: 401 KIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD----SHLFKENSL------LTWE 450
           KI+SRL   N+ +LLG C     L ++ E+M NG L+     H+ + + L      L++ 
Sbjct: 71  KILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFS 130

Query: 451 FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV---EHAK 507
               +A  +ASG+ YL+       VHRD+ + N ++  N+  KI DFG++R +   ++ +
Sbjct: 131 TLLYMATQIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYR 187

Query: 508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA--CGRKPINPKAPQGQVSL 565
                 L   + +MA E    GK + +SDV++FG+   EI   C  +P        QV  
Sbjct: 188 VQGRAPLP--IRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE-HLTDQQV-- 242

Query: 566 LQWVWDLYGNGKLLEAVD-PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIH 621
           ++     + +      +  P  C     + I  LM   L C   DE  RP+ R+ IH
Sbjct: 243 IENAGHFFRDDGRQIYLPRPPNCP----KDIYELM---LECWRRDEEDRPTFRE-IH 291

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 88.9 bits (220), Expect = 1e-19
 Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 22/207 (10%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS---EVKIISRLRHRNLVQL 414
           +K+G+G FG +Y    +  + +  +K +   +K  +KE  +   EV ++++++H N+V  
Sbjct: 6   KKIGEGSFGKIYLAKAKSDSEHCVIKEIDL-TKMPVKEKEASKKEVILLAKMKHPNIVTF 64

Query: 415 LGWCHEKKELLLVYEFMPNGSLDSH-------LFKENSLLTWEFRYKIAQDLASGLLYLQ 467
                E   L +V E+   G L          LF E+ +L+W  +      ++ GL ++ 
Sbjct: 65  FASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQ------ISLGLKHIH 118

Query: 468 EEWEQCVVHRDIKSSNIMLDSN-FNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECA 526
           +   + ++HRDIKS NI L  N   AK+GDFG+AR +  +     T   GT  Y++PE  
Sbjct: 119 D---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTC-VGTPYYLSPEIC 174

Query: 527 TTGKASKESDVYSFGIVALEIACGRKP 553
                + ++D++S G V  E+   + P
Sbjct: 175 QNRPYNNKTDIWSLGCVLYELCTLKHP 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 88.8 bits (221), Expect = 1e-19
 Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 9/197 (4%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVS--QGSKQGIKEYA-SEVKIISRLRHRNLVQLLG 416
           LG GGFG V     +  N   A+K V      + G +E+  SE +I+    H  +V+L  
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
              +KK + ++ E+   G L + L        +  R+ IA  +     YL     + +++
Sbjct: 61  TFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIAC-VVLAFEYLHN---RGIIY 116

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           RD+K  N++LDSN   K+ DFG A+ ++   G +T    GT  Y+APE           D
Sbjct: 117 RDLKPENLLLDSNGYVKLVDFGFAKKLK--SGQKTWTFCGTPEYVAPEIILNKGYDFSVD 174

Query: 537 VYSFGIVALEIACGRKP 553
            +S GI+  E+  GR P
Sbjct: 175 YWSLGILLYELLTGRPP 191

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 90.7 bits (225), Expect = 1e-19
 Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 39/213 (18%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGW 417
           ++G G  G VYK   R T    A+K +    +  ++ +   E++I+  + H N+V+    
Sbjct: 81  RIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVK---- 136

Query: 418 CHE----KKELLLVYEFMPNGSLD-SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
           CH+      E+ ++ EFM  GSL+ +H+  E  L        +A+ + SG+ YL     +
Sbjct: 137 CHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQFLA------DVARQILSGIAYLHR---R 187

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT----TVLAGTMGYMAPECATT 528
            +VHRDIK SN++++S  N KI DFG++R++     +QT        GT+ YM+PE   T
Sbjct: 188 HIVHRDIKPSNLLINSAKNVKIADFGVSRIL-----AQTMDPCNSSVGTIAYMSPERINT 242

Query: 529 --------GKASKESDVYSFGIVALEIACGRKP 553
                   G A    D++S G+  LE   GR P
Sbjct: 243 DLNHGAYDGYA---GDIWSLGVSILEFYLGRFP 272

Length = 353

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 90.1 bits (223), Expect = 1e-19
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 9/210 (4%)

Query: 349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLR 407
           L  +DF    +LG G  G V K   + +   +A K +    K  I+ +   E++++    
Sbjct: 2   LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN 61

Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
              +V   G  +   E+ +  E M  GSLD  + KE   +  E   K++  +  GL YL+
Sbjct: 62  SPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKEAKRIPEEILGKVSIAVLRGLAYLR 120

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPECA 526
           E+ +  ++HRD+K SNI+++S    K+ DFG++ +L++    S      GT  YM+PE  
Sbjct: 121 EKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERL 174

Query: 527 TTGKASKESDVYSFGIVALEIACGRKPINP 556
                S +SD++S G+  +E+A GR PI P
Sbjct: 175 QGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 89.0 bits (221), Expect = 1e-19
 Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 9/201 (4%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHRNLVQLLG 416
            +G+G +G V K   +ET   +A+K+   S+  K   K    E++++ +LRH NLV L+ 
Sbjct: 8   LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIE 67

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
               KK L LV+EF+ +  LD      N L     R  + Q L  G+ +        ++H
Sbjct: 68  VFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQIL-RGIEFCH---SHNIIH 123

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG-KASKES 535
           RDIK  NI++  +   K+ DFG AR +  A G   T    T  Y APE      K  +  
Sbjct: 124 RDIKPENILVSQSGVVKLCDFGFARTLA-APGEVYTDYVATRWYRAPELLVGDTKYGRAV 182

Query: 536 DVYSFGIVALEIACGRKPINP 556
           D+++ G +  E+  G +P+ P
Sbjct: 183 DIWAVGCLVTEMLTG-EPLFP 202

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 88.9 bits (220), Expect = 2e-19
 Identities = 81/286 (28%), Positives = 143/286 (50%), Gaps = 42/286 (14%)

Query: 358 QKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRN 410
           ++LGQG FG VY+G  R     E  + +AVK V++ +  ++ I E+ +E  ++      +
Sbjct: 12  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHH 70

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLF-----KENS----LLTWEFRYKIAQDLAS 461
           +V+LLG   + +  L+V E M +G L S+L       EN+      T +   ++A ++A 
Sbjct: 71  VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 130

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGT 517
           G+ YL     +  VHRD+ + N M+  +F  KIGDFG+ R +     + KG +  +    
Sbjct: 131 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL---P 184

Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK 577
           + +MAPE    G  +  SD++SFG+V  EI    +   P        +L++V D    G 
Sbjct: 185 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE--QPYQGLSNEQVLKFVMD----GG 238

Query: 578 LLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
            L+   P  C     +++  LM +   C   +  +RP+  +++++L
Sbjct: 239 YLD--QPDNCP----ERVTDLMRM---CWQFNPKMRPTFLEIVNLL 275

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 89.1 bits (221), Expect = 2e-19
 Identities = 72/227 (31%), Positives = 110/227 (48%), Gaps = 29/227 (12%)

Query: 339 PKRFPYKE-LALATNDFNDDQKLGQGGFGGVYK----GFFRETNSY-IAVKRVSQGSKQG 392
           P + PY        N+ +  + LG G FG V +    G  +      +AVK +   +   
Sbjct: 21  PTQLPYDLKWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSS 80

Query: 393 IKE-YASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF-KENSLLTW 449
            +E   SE+KI+S L  H N+V LLG C     +L++ E+   G L + L  K  S LT 
Sbjct: 81  EREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTL 140

Query: 450 E----FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH 505
           E    F Y++A+    G+ +L    + C+ HRD+ + N++L      KI DFGLAR + +
Sbjct: 141 EDLLSFSYQVAK----GMAFL--ASKNCI-HRDLAARNVLLTHGKIVKICDFGLARDIMN 193

Query: 506 -----AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
                 KG+    +     +MAPE       + ESDV+S+GI+  EI
Sbjct: 194 DSNYVVKGNARLPVK----WMAPESIFNCVYTFESDVWSYGILLWEI 236

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 88.1 bits (218), Expect = 2e-19
 Identities = 77/280 (27%), Positives = 121/280 (43%), Gaps = 44/280 (15%)

Query: 360 LGQGGFGGVYKGFF-----RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQL 414
           LG G FG + +G       RE    I   R     KQ  + + +E   + +  H N+V+L
Sbjct: 13  LGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQR-RGFLAEALTLGQFDHSNIVRL 71

Query: 415 LGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCV 474
            G       +++V E+M NG+LDS L K    L       +   LASG+ YL    E   
Sbjct: 72  EGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLS---EMGY 128

Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG--TMGYMAPECATTGKAS 532
           VH+ + +  ++++S+   KI  F   RL E    +  T ++G   + + APE       S
Sbjct: 129 VHKGLAAHKVLVNSDLVCKISGFR--RLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFS 186

Query: 533 KESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD-------P 584
             SDV+SFGIV  E+ + G +P                WD+     +++AV+       P
Sbjct: 187 SASDVWSFGIVMWEVMSYGERP---------------YWDM-SGQDVIKAVEDGFRLPAP 230

Query: 585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           R C       + +LM   L C   +   RP   Q+  +L+
Sbjct: 231 RNCP----NLLHQLM---LDCWQKERGERPRFSQIHSILS 263

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 87.9 bits (218), Expect = 2e-19
 Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 26/269 (9%)

Query: 360 LGQGGFGGVYKGFFRETNS---YIAVKRVSQGSK-QGIKEYASEVKIISRLRHRNLVQLL 415
           +G+G FG VY G   +++    + AVK +++ +  + ++++  E  I+    H N++ LL
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62

Query: 416 GWCHEKKEL-LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCV 474
           G C   +   L+V  +M +G L + +  E    T +        +A G+ YL     +  
Sbjct: 63  GICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLAS---KKF 119

Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKA 531
           VHRD+ + N MLD +F  K+ DFGLAR +   E+      T     + +MA E   T K 
Sbjct: 120 VHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKF 179

Query: 532 SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD 591
           + +SDV+SFG++  E+     P     P   V        L    +LL+   P  C D  
Sbjct: 180 TTKSDVWSFGVLLWELMTRGAP-----PYPDVDSFDITVYLLQGRRLLQ---PEYCPD-- 229

Query: 592 GQQIERLMIVGLWCAHPDENLRPSIRQVI 620
                 L  V L C HP   +RP+  +++
Sbjct: 230 -----PLYEVMLSCWHPKPEMRPTFSELV 253

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 88.5 bits (219), Expect = 2e-19
 Identities = 68/243 (27%), Positives = 119/243 (48%), Gaps = 43/243 (17%)

Query: 342 FPYKELALATNDFNDDQKLGQGGFGGVY----KGF----------FRETNSYIAVKRV-S 386
           FP ++L L        +KLG+G FG V+    +G           F      +AVK + +
Sbjct: 2   FPRQQLRLK-------EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRA 54

Query: 387 QGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD--------- 437
             +K    ++  E+KI+SRL++ N+++LLG C     L ++ E+M NG L+         
Sbjct: 55  DVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIE 114

Query: 438 SHLFKENSL--LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
           S     N++  ++      +A  +ASG+ YL        VHRD+ + N ++ +++  KI 
Sbjct: 115 STFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNCLVGNHYTIKIA 171

Query: 496 DFGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI--ACG 550
           DFG++R +   ++ +     VL   + +MA E    GK +  SDV++FG+   E+   C 
Sbjct: 172 DFGMSRNLYSGDYYRIQGRAVLP--IRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCK 229

Query: 551 RKP 553
            +P
Sbjct: 230 EQP 232

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 88.5 bits (220), Expect = 2e-19
 Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 6/168 (3%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ-GI-KEYASEVKIISRLRHRNLVQLLG 416
           ++G+G  G V+K   RET   +A+K+V+    + GI  +   E+K +   +H  +V+LL 
Sbjct: 7   RIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLD 66

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
                   +LV E+MP   L   L  E   L         + L  G+ Y+       ++H
Sbjct: 67  VFPHGSGFVLVMEYMP-SDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMH 122

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE 524
           RD+K +N+++ ++   KI DFGLARL    +    +    T  Y APE
Sbjct: 123 RDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPE 170

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 89.3 bits (222), Expect = 3e-19
 Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 24/217 (11%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA----SEVKIISRLRH 408
            + +   +G+G +G V     + T   +A+K++S    Q    +      E+KI+ R +H
Sbjct: 6   RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQ---TFCQRTLREIKILRRFKH 62

Query: 409 RNLVQLL-----GWCHEKKELLLVYEFMPNGSLDSH-LFKENSLLTWEFRYKIAQDLASG 462
            N++ +L            ++ +V E M     D + L K   L     +Y + Q L  G
Sbjct: 63  ENIIGILDIIRPPSFESFNDVYIVQELMET---DLYKLIKTQHLSNDHIQYFLYQIL-RG 118

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV--EHAKGSQTTVLAGTMGY 520
           L Y+       V+HRD+K SN++L++N + KI DFGLAR+   EH      T    T  Y
Sbjct: 119 LKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWY 175

Query: 521 MAPECATTGKA-SKESDVYSFGIVALEIACGRKPINP 556
            APE     K  +K  D++S G +  E+   R P+ P
Sbjct: 176 RAPEIMLNSKGYTKAIDIWSVGCILAEMLSNR-PLFP 211

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 88.9 bits (221), Expect = 3e-19
 Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 12/161 (7%)

Query: 350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYA-SEVKIISRLR 407
              D+    KLG+G FG VYK    +T   +A+K++   + K G    A  E+KI+ +L+
Sbjct: 6   KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK 65

Query: 408 HRNLVQLLGWCHEK-----KELLLVYEFMPNGSLD-SHLFKENSLLTWEFRYK-IAQDLA 460
           H N+V L+    E+     ++   VY   P    D S L +  S+   E + K     L 
Sbjct: 66  HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLL 125

Query: 461 SGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR 501
            G+ YL E     ++HRDIK++NI++D+    KI DFGLAR
Sbjct: 126 EGINYLHE---NHILHRDIKAANILIDNQGILKIADFGLAR 163

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 88.2 bits (219), Expect = 3e-19
 Identities = 79/296 (26%), Positives = 136/296 (45%), Gaps = 57/296 (19%)

Query: 360 LGQGGFGGVYKGFFRETN-----SYIAVKRV-SQGSKQGIKEYASEVKIISRL-RHRNLV 412
           LG+G FG V K      +     S +AVK +    +++ + +  SE++++  + +H+N++
Sbjct: 20  LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNII 79

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHL-------FKENSLLTWEFRYKIAQ-DLAS--- 461
            LLG C ++  L +V E+  +G+L   L          +          + Q DL S   
Sbjct: 80  NLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAY 139

Query: 462 ----GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT 517
               G+ +L    ++C+ HRD+ + N+++  +   KI DFGLAR + H    + T    T
Sbjct: 140 QVARGMEFL--ASKKCI-HRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKT----T 192

Query: 518 MG-----YMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWD 571
            G     +MAPE       + +SDV+SFG++  EI   G  P  P  P         V +
Sbjct: 193 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPY-PGIP---------VEE 242

Query: 572 LYGN---GKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           L+     G  +E   P+ C     Q++  LM     C H   + RP+ +Q++  L+
Sbjct: 243 LFKLLKEGYRMEK--PQNCT----QELYHLM---RDCWHEVPSQRPTFKQLVEDLD 289

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 88.2 bits (218), Expect = 3e-19
 Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 22/211 (10%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWC 418
           +LG G FG VYK   +ET    A K +   S++ +++Y  E+ I++   H N+V+LL   
Sbjct: 12  ELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 71

Query: 419 HEKKELLLVYEFMPNGSLDSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
           + +  L ++ EF   G++D+ + + E  L   + R    Q L + L YL    E  ++HR
Sbjct: 72  YYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEA-LNYLH---ENKIIHR 127

Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT----VLAGTMGYMAPE---CATTGK 530
           D+K+ NI+   + + K+ DFG++     AK ++T        GT  +MAPE   C T+  
Sbjct: 128 DLKAGNILFTLDGDIKLADFGVS-----AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 182

Query: 531 ASKE--SDVYSFGIVALEIACGRKP---INP 556
              +  +DV+S GI  +E+A    P   +NP
Sbjct: 183 RPYDYKADVWSLGITLIEMAQIEPPHHELNP 213

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 88.3 bits (219), Expect = 5e-19
 Identities = 71/230 (30%), Positives = 108/230 (46%), Gaps = 19/230 (8%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRH 408
           TN + D Q +G G FG V     + T   +A+K++ +     +  K    E+K++  LRH
Sbjct: 9   TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRH 68

Query: 409 RNLVQLLG-WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
            N++ L   +    +++  V E +     D H    +  L  +F       +  GL Y+ 
Sbjct: 69  ENIISLSDIFISPLEDIYFVTELL---GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVH 125

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT 527
                 VVHRD+K SNI+++ N + KI DFGLAR+ +     Q T    T  Y APE   
Sbjct: 126 S---AGVVHRDLKPSNILINENCDLKICDFGLARIQDP----QMTGYVSTRYYRAPEIML 178

Query: 528 T-GKASKESDVYSFGIVALEIACGRKPINP-KAPQGQVSLLQWVWDLYGN 575
           T  K   E D++S G +  E+  G KP+ P K    Q S++    DL G 
Sbjct: 179 TWQKYDVEVDIWSAGCIFAEMLEG-KPLFPGKDHVNQFSIIT---DLLGT 224

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 87.8 bits (218), Expect = 6e-19
 Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 20/196 (10%)

Query: 342 FPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYA-SE 399
           FP+ +     + +    K+GQG FG V+K   ++T   +A+K+V   + K+G    A  E
Sbjct: 5   FPFCD---EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALRE 61

Query: 400 VKIISRLRHRNLVQLLGWCHEKK--------ELLLVYEFMPNGSLDSHLFKENSLLTWEF 451
           +KI+  L+H N+V L+  C  K            LV+EF  +  L   L  +N   T   
Sbjct: 62  IKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSE 120

Query: 452 RYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT 511
             K+ + L +GL Y+       ++HRD+K++NI++  +   K+ DFGLAR    +K S+ 
Sbjct: 121 IKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKP 177

Query: 512 TVLAG---TMGYMAPE 524
                   T+ Y  PE
Sbjct: 178 NRYTNRVVTLWYRPPE 193

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 86.8 bits (216), Expect = 8e-19
 Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 41/218 (18%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS--------EVKIISRL-RH 408
           ++LG G FG VY    +ET   +A+K++        K++ S        EVK + +L  H
Sbjct: 5   KQLGDGTFGSVYLARNKETGELVAIKKM-------KKKFYSWEECMNLREVKSLRKLNEH 57

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSL-------DSHLFKENSLLTWEFRYKIAQDLAS 461
            N+V+L     E  EL  V+E+M  G+L           F E+ +     R  I Q +  
Sbjct: 58  PNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVI-----RSIIYQ-ILQ 110

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT--TVLAGTMG 519
           GL ++ +       HRD+K  N+++      KI DFGLAR +     S+   T    T  
Sbjct: 111 GLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIR----SRPPYTDYVSTRW 163

Query: 520 YMAPECA-TTGKASKESDVYSFGIVALEIACGRKPINP 556
           Y APE    +   S   D+++ G +  E+   R P+ P
Sbjct: 164 YRAPEILLRSTSYSSPVDIWALGCIMAELYTLR-PLFP 200

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 86.6 bits (214), Expect = 8e-19
 Identities = 57/211 (27%), Positives = 108/211 (51%), Gaps = 15/211 (7%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYASEVKIISRLRHRNLV 412
           F   +++G+G FG V+KG    T   +A+K +  + ++  I++   E+ ++S+     + 
Sbjct: 6   FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 413 QLLGWCHEKKELLLVYEFMPNGS----LDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
           +  G   +  +L ++ E++  GS    L +  F E  + T      + +++  GL YL  
Sbjct: 66  KYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIAT------MLKEILKGLDYLHS 119

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT 528
           E +   +HRDIK++N++L    + K+ DFG+A  +   +  + T   GT  +MAPE    
Sbjct: 120 EKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIQQ 175

Query: 529 GKASKESDVYSFGIVALEIACGRKPINPKAP 559
                ++D++S GI A+E+A G  P +   P
Sbjct: 176 SAYDSKADIWSLGITAIELAKGEPPNSDMHP 206

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 86.2 bits (213), Expect = 1e-18
 Identities = 75/277 (27%), Positives = 124/277 (44%), Gaps = 25/277 (9%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHR 409
           +F  ++K+G+G F  VY+         +A+K+V        K  A    E+ ++ +L H 
Sbjct: 3   NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 62

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDS---HLFKENSLLTWEFRYKIAQDLASGLLYL 466
           N+++      E  EL +V E    G L     H  K+  L+  +  +K    L S L ++
Sbjct: 63  NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM 122

Query: 467 QEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECA 526
                + V+HRDIK +N+ + +    K+GD GL R    +K +    L GT  YM+PE  
Sbjct: 123 HS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPERI 178

Query: 527 TTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD-PR 585
                + +SD++S G +  E+A  + P                 +LY   K +E  D P 
Sbjct: 179 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-----------MNLYSLCKKIEQCDYPP 227

Query: 586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHV 622
           L  D   +++ +L+ +   C +PD   RP I  V  V
Sbjct: 228 LPSDHYSEELRQLVNM---CINPDPEKRPDITYVYDV 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 87.4 bits (216), Expect = 1e-18
 Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 9/210 (4%)

Query: 349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLR 407
           L  +DF    +LG G  G V+K   + +   +A K +    K  I+ +   E++++    
Sbjct: 2   LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN 61

Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
              +V   G  +   E+ +  E M  GSLD  + K+   +  +   K++  +  GL YL+
Sbjct: 62  SPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSIAVIKGLTYLR 120

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPECA 526
           E+ +  ++HRD+K SNI+++S    K+ DFG++ +L++    S      GT  YM+PE  
Sbjct: 121 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERL 174

Query: 527 TTGKASKESDVYSFGIVALEIACGRKPINP 556
                S +SD++S G+  +E+A GR PI P
Sbjct: 175 QGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 86.2 bits (213), Expect = 1e-18
 Identities = 64/199 (32%), Positives = 90/199 (45%), Gaps = 11/199 (5%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLG 416
           LG+GGFG V     + T    A K++ +     K G K    E +I+ ++    +V L  
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAY 60

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFK--ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCV 474
               K  L LV   M  G L  H++   E  L      +  AQ +  G+L+L       +
Sbjct: 61  AFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQ-ITCGILHLHS---MDI 116

Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKE 534
           V+RD+K  N++LD   N ++ D GLA  VE   G   T  AGT GYMAPE       S  
Sbjct: 117 VYRDMKPENVLLDDQGNCRLSDLGLA--VELKDGKTITQRAGTNGYMAPEILKEEPYSYP 174

Query: 535 SDVYSFGIVALEIACGRKP 553
            D ++ G    E+  GR P
Sbjct: 175 VDWFAMGCSIYEMVAGRTP 193

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 86.3 bits (213), Expect = 1e-18
 Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 9/208 (4%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYASEVKIISRLRHRNLV 412
           F   +++G+G FG VYKG    T   +A+K +  + ++  I++   E+ ++S+     + 
Sbjct: 6   FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 65

Query: 413 QLLGWCHEKKELLLVYEFMPNGS-LDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           +  G   +  +L ++ E++  GS LD  L K   L    +   I +++  GL YL  E +
Sbjct: 66  RYYGSYLKGTKLWIIMEYLGGGSALD--LLKPGPL-EETYIATILREILKGLDYLHSERK 122

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA 531
              +HRDIK++N++L    + K+ DFG+A  +   +  + T   GT  +MAPE       
Sbjct: 123 ---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIKQSAY 178

Query: 532 SKESDVYSFGIVALEIACGRKPINPKAP 559
             ++D++S GI A+E+A G  P +   P
Sbjct: 179 DFKADIWSLGITAIELAKGEPPNSDLHP 206

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 86.0 bits (213), Expect = 1e-18
 Identities = 81/277 (29%), Positives = 124/277 (44%), Gaps = 38/277 (13%)

Query: 360 LGQGGFGGVYKGFFRETN---SYIAVKRVS----------QGSKQGIKEYASEVKII-SR 405
           LG G FG VYK   R+ N   + +A+K ++          +   + I +  SEV II  +
Sbjct: 8   LGSGAFGCVYK--VRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ 65

Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL--FKENSLLTWEFR-YKIAQDLASG 462
           LRH N+V+      E   L +V + +    L  H    KE      E R + I   +   
Sbjct: 66  LRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLA 125

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
           L YL +E  + +VHRD+  +NIML  +    I DFGLA+  +    S+ T + GT+ Y  
Sbjct: 126 LRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDFGLAK--QKQPESKLTSVVGTILYSC 181

Query: 523 PECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV 582
           PE        +++DV++FG +  ++ C  +P  P      +SL           K++EAV
Sbjct: 182 PEIVKNEPYGEKADVWAFGCILYQM-CTLQP--PFYSTNMLSLAT---------KIVEAV 229

Query: 583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQV 619
              L      + +   +I    C  PD   RP I QV
Sbjct: 230 YEPLPEGMYSEDV-TDVIT--SCLTPDAEARPDIIQV 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 85.8 bits (212), Expect = 1e-18
 Identities = 60/199 (30%), Positives = 109/199 (54%), Gaps = 8/199 (4%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLG 416
           ++KLG G FG V+   + + ++ +AVK +  GS   ++ + +E  ++  L+H  LV+L  
Sbjct: 11  EKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHA 68

Query: 417 WCHEKKELLLVYEFMPNGSLDSHL-FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
               K+ + ++ EFM  GSL   L   E S          +  +A G+ ++++   +  +
Sbjct: 69  VV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYI 124

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES 535
           HRD++++NI++ ++   KI DFGLAR++E  + +        + + APE    G  + +S
Sbjct: 125 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 184

Query: 536 DVYSFGIVALEIAC-GRKP 553
           DV+SFGI+ +EI   GR P
Sbjct: 185 DVWSFGILLMEIVTYGRIP 203

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 85.9 bits (213), Expect = 1e-18
 Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 18/213 (8%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRV-SQGSKQGIKEYASEVKIISRLRH-R 409
           +D    ++LG+G +G V K     T + +AVKR+ +  + Q  K    ++ I  R     
Sbjct: 1   DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCP 60

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDS---HLFKENSLLTWEFRYKIAQDLASGLLYL 466
             V   G    + ++ +  E M + SLD     ++ +   +  +   KIA  +   L YL
Sbjct: 61  YTVTFYGALFREGDVWICMEVM-DTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYL 119

Query: 467 QEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEH-AKGSQTTVLAGTMGYMAPE 524
             +    V+HRD+K SN++++ N   K+ DFG++  LV+  AK    T+ AG   YMAPE
Sbjct: 120 HSKLS--VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAK----TIDAGCKPYMAPE 173

Query: 525 ---CATTGKA-SKESDVYSFGIVALEIACGRKP 553
                   K    +SDV+S GI  +E+A GR P
Sbjct: 174 RINPELNQKGYDVKSDVWSLGITMIELATGRFP 206

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 86.3 bits (214), Expect = 2e-18
 Identities = 64/210 (30%), Positives = 109/210 (51%), Gaps = 15/210 (7%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQ-GSKQGIKEYASEVKIISRLRHR- 409
           ND  +  ++G G  G VYK  F++T   +AVK++ + G+K+  K    ++ ++    H  
Sbjct: 15  NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVL-KSHDC 73

Query: 410 -NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
             +V+  G+     ++ +  E M    LD  L +    +  +   K+   +   L YL+E
Sbjct: 74  PYIVKCYGYFITDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE 132

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPECAT 527
           +    V+HRD+K SNI+LD++ N K+ DFG++ RLV+    +++   AG   YMAPE   
Sbjct: 133 K--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRS---AGCAAYMAPERID 187

Query: 528 ----TGKASKESDVYSFGIVALEIACGRKP 553
                 K    +DV+S GI  +E+A G+ P
Sbjct: 188 PPDPNPKYDIRADVWSLGISLVELATGQFP 217

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 85.6 bits (212), Expect = 2e-18
 Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 40/218 (18%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYA-SEVKIISRLRHRNLVQLL 415
           +K+G+G +G V+K   RET+  +A+KRV      +G+   A  E+ ++  L+H+N+V+L 
Sbjct: 6   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLY 65

Query: 416 GWCHEKKELLLVYEFMP----------NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
              H  K+L LV+E+            NG +D  + K        F +++ +    GL +
Sbjct: 66  DVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKS-------FMFQLLK----GLAF 114

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG------SQTTVLAGTMG 519
                   V+HRD+K  N++++ N   K+ DFGLAR    A G      S   V   T+ 
Sbjct: 115 CHS---HNVLHRDLKPQNLLINKNGELKLADFGLAR----AFGIPVRCYSAEVV---TLW 164

Query: 520 YMAPECATTGKASKES-DVYSFGIVALEIACGRKPINP 556
           Y  P+     K    S D++S G +  E+A   +P+ P
Sbjct: 165 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 202

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 84.8 bits (210), Expect = 2e-18
 Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 19/202 (9%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           LG+G FG        E +S +  K V  ++ S++  ++  +E+ I+S L+H N++     
Sbjct: 8   LGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNH 67

Query: 418 CHEKKELLLVYEFMPNGSL-------DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
             +   LL+  E+   G+L          LF+E  +L + F+      + S + Y+ +  
Sbjct: 68  FMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQ------IVSAVSYIHKA- 120

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK 530
              ++HRDIK+ NI L      K+GDFG+++++        TV+ GT  YM+PE     K
Sbjct: 121 --GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVV-GTPYYMSPELCQGVK 177

Query: 531 ASKESDVYSFGIVALEIACGRK 552
            + +SD+++ G V  E+   ++
Sbjct: 178 YNFKSDIWALGCVLYELLTLKR 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 85.8 bits (212), Expect = 2e-18
 Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 43/242 (17%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYI--AVKRVSQ-GSKQGIKEYASEVKIISRL-RH 408
           D   +  +G+G FG V +   ++    +  A+K + +  S+   +++A E++++ +L  H
Sbjct: 3   DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHH 62

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSL------------DSHLFKEN---SLLTWEFRY 453
            N++ LLG C  +  L +  E+ P G+L            D    KE+   S LT +   
Sbjct: 63  PNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLL 122

Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
           + A D+A+G+ YL E+     +HRD+ + N+++  N  +KI DFGL+R        +   
Sbjct: 123 QFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLASKIADFGLSR-------GEEVY 172

Query: 514 LAGTMG-----YMAPECATTGKASKESDVYSFGIVALEIA-------CGRK--PINPKAP 559
           +  TMG     +MA E       + +SDV+SFG++  EI        CG     +  K P
Sbjct: 173 VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLP 232

Query: 560 QG 561
           QG
Sbjct: 233 QG 234

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 85.4 bits (211), Expect = 2e-18
 Identities = 74/297 (24%), Positives = 129/297 (43%), Gaps = 56/297 (18%)

Query: 357 DQKLGQGGFGGVYKGFFRETN-----SYIAVKRVSQGSKQG-IKEYASEVKIISRLRHRN 410
            + LG+G FG V K            + +AVK + + +    +++  SE  ++ ++ H +
Sbjct: 5   GKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPH 64

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSL-----------------------L 447
           +++L G C +   LLL+ E+   GSL S L +   +                       L
Sbjct: 65  VIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERAL 124

Query: 448 TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV---- 503
           T       A  ++ G+ YL E     +VHRD+ + N+++      KI DFGL+R V    
Sbjct: 125 TMGDLISFAWQISRGMQYLAE---MKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEED 181

Query: 504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAPQGQ 562
            + K S+  +    + +MA E       + +SDV+SFG++  EI   G  P    AP+  
Sbjct: 182 SYVKRSKGRI---PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER- 237

Query: 563 VSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQV 619
                 +++L   G  +E   P  C     +++  LM+   W   PD+  RP+   +
Sbjct: 238 ------LFNLLKTGYRMER--PENC----SEEMYNLMLT-CWKQEPDK--RPTFADI 279

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 85.1 bits (210), Expect = 2e-18
 Identities = 56/205 (27%), Positives = 104/205 (50%), Gaps = 15/205 (7%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYASEVKIISRLRHRNLV 412
           F   +K+G+G FG V+KG    T   +A+K +  + ++  I++   E+ ++S+     + 
Sbjct: 6   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 413 QLLGWCHEKKELLLVYEFMPNGS----LDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
           +  G   +  +L ++ E++  GS    L+     E  + T      I +++  GL YL  
Sbjct: 66  KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ILREILKGLDYLHS 119

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT 528
           E +   +HRDIK++N++L  +   K+ DFG+A  +   +  +     GT  +MAPE    
Sbjct: 120 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNTFVGTPFWMAPEVIKQ 175

Query: 529 GKASKESDVYSFGIVALEIACGRKP 553
                ++D++S GI A+E+A G  P
Sbjct: 176 SAYDSKADIWSLGITAIELAKGEPP 200

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 85.3 bits (211), Expect = 3e-18
 Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 15/211 (7%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLG 416
           + LG G  G VYK +   T   +AVK +    + +  K+  SE++I+ +     ++   G
Sbjct: 7   EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYG 66

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
               +  + +  EFM  GSLD +      +L      +IA  +  GL YL   W   ++H
Sbjct: 67  AFFVENRISICTEFMDGGSLDVYRKIPEHVLG-----RIAVAVVKGLTYL---WSLKILH 118

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLAR-LVEHAKGSQTTVLAGTMGYMAPECATTGKASKES 535
           RD+K SN+++++    K+ DFG++  LV     S      GT  YMAPE  +  +    S
Sbjct: 119 RDVKPSNMLVNTRGQVKLCDFGVSTQLVN----SIAKTYVGTNAYMAPERISGEQYGIHS 174

Query: 536 DVYSFGIVALEIACGRKPINPKAPQGQVSLL 566
           DV+S GI  +E+A GR P  P+  + Q SL+
Sbjct: 175 DVWSLGISFMELALGRFPY-PQIQKNQGSLM 204

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 86.0 bits (214), Expect = 3e-18
 Identities = 69/217 (31%), Positives = 105/217 (48%), Gaps = 24/217 (11%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNL 411
           +   + +G G +G V     + T   +A+K++S      I  K    E+K++  LRH N+
Sbjct: 2   YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENI 61

Query: 412 VQLL-----GWCHEKKELLLVYEFMPNGSLDSH-LFKENSLLTWE-FRYKIAQDLASGLL 464
           + LL         +  ++ +V E M     D H + K    LT +  +Y + Q L  GL 
Sbjct: 62  IGLLDILRPPSPEDFNDVYIVTELME---TDLHKVIKSPQPLTDDHIQYFLYQIL-RGLK 117

Query: 465 YLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG---TMGYM 521
           YL       V+HRD+K SNI+++SN + KI DFGLAR V+     +   L     T  Y 
Sbjct: 118 YLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGVDP-DEDEKGFLTEYVVTRWYR 173

Query: 522 APECATTGKA-SKESDVYSFG-IVALEIACGRKPINP 556
           APE   +    +K  D++S G I A E+   RKP+ P
Sbjct: 174 APELLLSSSRYTKAIDIWSVGCIFA-ELL-TRKPLFP 208

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 84.6 bits (209), Expect = 3e-18
 Identities = 63/203 (31%), Positives = 111/203 (54%), Gaps = 14/203 (6%)

Query: 359 KLGQGGFGGVYKGFFR--ETNSYIAVKRV-SQGSKQGIK-EYASEVKIISRLRHRNLVQL 414
           +LG G FG V KG ++  ++   +AVK + +  +   +K E   E  ++ +L +  +V++
Sbjct: 2   ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRM 61

Query: 415 LGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCV 474
           +G C E +  +LV E    G L+  L K N  +T +   ++   ++ G+ YL+E      
Sbjct: 62  IGIC-EAESWMLVMELAELGPLNKFLQK-NKHVTEKNITELVHQVSMGMKYLEE---TNF 116

Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKA 531
           VHRD+ + N++L +   AKI DFGL++ +   E+   ++T      + + APEC    K 
Sbjct: 117 VHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHG-KWPVKWYAPECMNYYKF 175

Query: 532 SKESDVYSFGIVALE-IACGRKP 553
           S +SDV+SFG++  E  + G+KP
Sbjct: 176 SSKSDVWSFGVLMWEAFSYGQKP 198

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 84.9 bits (210), Expect = 3e-18
 Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 24/208 (11%)

Query: 360 LGQGGFGGVYKGFFRE---TNSYIAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQL 414
           LG+G FG V +G   +   +   +AVK  ++   +   I+E+ SE   +    H N+++L
Sbjct: 7   LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66

Query: 415 LGWCHEKKEL------LLVYEFMPNGSLDSHLFK----ENSL-LTWEFRYKIAQDLASGL 463
           +G C E   L      +++  FM +G L S L           L  +   K   D+A G+
Sbjct: 67  IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS---QTTVLAGTMGY 520
            YL     +  +HRD+ + N ML  +    + DFGL++ +    G    Q  +    + +
Sbjct: 127 EYLSN---RNFIHRDLAARNCMLREDMTVCVADFGLSKKI--YSGDYYRQGRIAKMPVKW 181

Query: 521 MAPECATTGKASKESDVYSFGIVALEIA 548
           +A E       + +SDV++FG+   EIA
Sbjct: 182 IAIESLADRVYTSKSDVWAFGVTMWEIA 209

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 85.6 bits (212), Expect = 4e-18
 Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 14/212 (6%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQ---GSKQGIKEYASEVKIISRLRH 408
            DF+    +G+G FG V     + T    A+K + +    +++ +  +  E  I+S    
Sbjct: 1   KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS 60

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQ-DLASGLLYLQ 467
             + QL     +K  L LV E+ P G L S L +       +F   +AQ  LA  +L + 
Sbjct: 61  PWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYED----QFDEDMAQFYLAELVLAIH 116

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT 527
              +   VHRDIK  N+++D   + K+ DFG A  +   K   + +  GT  Y+APE  T
Sbjct: 117 SVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLT 176

Query: 528 T----GKASK--ESDVYSFGIVALEIACGRKP 553
           T    GK +   E D +S G++A E+  GR P
Sbjct: 177 TMNGDGKGTYGVECDWWSLGVIAYEMIYGRSP 208

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 85.1 bits (210), Expect = 5e-18
 Identities = 65/206 (31%), Positives = 95/206 (46%), Gaps = 16/206 (7%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRN 410
           F    ++G G FG VY      TN  +AVK++S   KQ  +++     EVK + +L+H N
Sbjct: 23  FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPN 82

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
            ++  G   ++    LV E+    + D     +  L   E    I      GL YL    
Sbjct: 83  TIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AITHGALQGLAYLHS-- 139

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE---CAT 527
              ++HRDIK+ NI+L      K+ DFG A     +K S      GT  +MAPE      
Sbjct: 140 -HNMIHRDIKAGNILLTEPGQVKLADFGSA-----SKSSPANSFVGTPYWMAPEVILAMD 193

Query: 528 TGKASKESDVYSFGIVALEIACGRKP 553
            G+   + DV+S GI  +E+A  RKP
Sbjct: 194 EGQYDGKVDVWSLGITCIELA-ERKP 218

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 85.1 bits (210), Expect = 5e-18
 Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 16/206 (7%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRN 410
           F D +++G G FG VY      TN  +A+K++S   KQ  +++     EVK + R++H N
Sbjct: 27  FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN 86

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
            ++  G    +    LV E+    + D     +  L   E    I      GL YL    
Sbjct: 87  SIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AITHGALQGLAYLH--- 142

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE---CAT 527
              ++HRDIK+ NI+L      K+ DFG A +   A         GT  +MAPE      
Sbjct: 143 SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANS-----FVGTPYWMAPEVILAMD 197

Query: 528 TGKASKESDVYSFGIVALEIACGRKP 553
            G+   + DV+S GI  +E+A  RKP
Sbjct: 198 EGQYDGKVDVWSLGITCIELA-ERKP 222

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 83.8 bits (207), Expect = 6e-18
 Identities = 57/193 (29%), Positives = 101/193 (52%), Gaps = 9/193 (4%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKR--VSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           +G+G FG V+    +     + +K+  V Q +K       +E +++  L H N+++    
Sbjct: 8   VGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYEN 67

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
             E K L++V E+ P G+L  ++ K  NSLL  +    I       LL L     + ++H
Sbjct: 68  FLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDED---TILHFFVQILLALHHVHTKLILH 124

Query: 477 RDIKSSNIMLDSNFN-AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES 535
           RD+K+ NI+LD +    KIGDFG+++++     + T V  GT  Y++PE       +++S
Sbjct: 125 RDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVV--GTPCYISPELCEGKPYNQKS 182

Query: 536 DVYSFGIVALEIA 548
           D+++ G V  E+A
Sbjct: 183 DIWALGCVLYELA 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 84.1 bits (208), Expect = 6e-18
 Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 16/203 (7%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLG 416
           LG+GGFG V     R T    A K++++     ++G +    E +I++++  R +V L  
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAY 60

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLF---KENSLLTWEFR--YKIAQDLASGLLYLQEEWE 471
               K +L LV   M  G L  H++   +EN     E R  +  AQ + SGL +L +   
Sbjct: 61  AFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFP-EPRACFYTAQ-IISGLEHLHQ--- 115

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGK 530
           + +++RD+K  N++LD++ N +I D GLA  VE   G S+T   AGT G+MAPE     +
Sbjct: 116 RRIIYRDLKPENVLLDNDGNVRISDLGLA--VELKDGQSKTKGYAGTPGFMAPELLQGEE 173

Query: 531 ASKESDVYSFGIVALEIACGRKP 553
                D ++ G+   E+   R P
Sbjct: 174 YDFSVDYFALGVTLYEMIAARGP 196

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 84.7 bits (209), Expect = 6e-18
 Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 16/206 (7%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRN 410
           F+D +++G G FG VY       +  +A+K++S   KQ  +++     EV+ + +LRH N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
            +Q  G    +    LV E+    + D     +  L   E    +      GL YL    
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHS-- 133

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE---CAT 527
              ++HRD+K+ NI+L      K+GDFG A ++  A         GT  +MAPE      
Sbjct: 134 -HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-----FVGTPYWMAPEVILAMD 187

Query: 528 TGKASKESDVYSFGIVALEIACGRKP 553
            G+   + DV+S GI  +E+A  RKP
Sbjct: 188 EGQYDGKVDVWSLGITCIELA-ERKP 212

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 83.9 bits (207), Expect = 8e-18
 Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 33/227 (14%)

Query: 346 ELALATNDFNDDQKLGQGGFGGVYKGFF----RETNSYIAVKRVSQ-GSKQGIKEYASEV 400
           EL L+   F ++  LG+  FG +YKG       +    +A+K +    + Q   E+  E 
Sbjct: 1   ELPLSAVRFMEE--LGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEA 58

Query: 401 KIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK-----------------E 443
            +++ L H N+V LLG   +++ + +++E++  G L   L                   +
Sbjct: 59  SLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVK 118

Query: 444 NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV 503
           +SL   +F + IA  +A+G+ YL   +    VH+D+ + NI++    + KI D GL+R +
Sbjct: 119 SSLDHGDFLH-IAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREI 174

Query: 504 ---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
              ++ +    ++L   + +M PE    GK S +SD++SFG+V  EI
Sbjct: 175 YSADYYRVQPKSLLP--IRWMPPEAIMYGKFSSDSDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 83.8 bits (207), Expect = 9e-18
 Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 8/197 (4%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLVQLLG 416
           +K+GQG  G VY      T   +A+K+++   +Q  KE   +E+ ++   +H N+V  L 
Sbjct: 25  EKIGQGASGTVYTAIDVATGQEVAIKQMNL-QQQPKKELIINEILVMRENKHPNIVNYLD 83

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
                 EL +V E++  GSL + +  E  +   +    + ++    L +L       V+H
Sbjct: 84  SYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIA-AVCRECLQALEFLHSNQ---VIH 138

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           RDIKS NI+L  + + K+ DFG    +   +  ++T + GT  +MAPE  T      + D
Sbjct: 139 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKVD 197

Query: 537 VYSFGIVALEIACGRKP 553
           ++S GI+A+E+  G  P
Sbjct: 198 IWSLGIMAIEMVEGEPP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 83.8 bits (207), Expect = 1e-17
 Identities = 67/236 (28%), Positives = 111/236 (47%), Gaps = 45/236 (19%)

Query: 358 QKLGQGGFGGV---------------YKGFFRETNSY-IAVKRV-SQGSKQGIKEYASEV 400
           +KLG+G FG V               +    R+     +AVK +    +K    ++  EV
Sbjct: 11  EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEV 70

Query: 401 KIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD----SHLFKENS----------- 445
           KI+SRL+  N+++LLG C ++  L ++ E+M NG L+    SH   +             
Sbjct: 71  KILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAH 130

Query: 446 ---LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL 502
               +++     +A  +ASG+ YL        VHRD+ + N ++  N   KI DFG++R 
Sbjct: 131 CLPAISYSSLLHVALQIASGMKYLS---SLNFVHRDLATRNCLVGENLTIKIADFGMSRN 187

Query: 503 V---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI--ACGRKP 553
           +   ++ +     VL   + +MA EC   GK +  SDV++FG+   EI   C  +P
Sbjct: 188 LYAGDYYRIQGRAVLP--IRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 83.0 bits (205), Expect = 1e-17
 Identities = 57/217 (26%), Positives = 107/217 (49%), Gaps = 19/217 (8%)

Query: 358 QKLGQGGFGGVYKGFFRETNSY-------IAVKRVSQGSKQGIKEYASEVKIISRLRHRN 410
           + LGQG F  ++KG  RE   Y       + +K + +  +   + +     ++S+L H++
Sbjct: 1   ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKH 60

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           LV   G C    E ++V E++  GSLD++L K  +L+   ++ ++A+ LA  L +L+   
Sbjct: 61  LVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLE--- 117

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM-----GYMAPEC 525
           ++ + H ++ + N++L    + K G+    +L +   G   TVL   +      ++ PEC
Sbjct: 118 DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSD--PGISITVLPKEILLERIPWVPPEC 175

Query: 526 ATTGKA-SKESDVYSFGIVALEIACG-RKPINPKAPQ 560
               +  S  +D +SFG    EI  G  KP++    Q
Sbjct: 176 IENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ 212

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 83.2 bits (205), Expect = 1e-17
 Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 43/235 (18%)

Query: 360 LGQGGFGGVYKGFFRETNSYI--AVKRVSQ-GSKQGIKEYASEVKIISRL-RHRNLVQLL 415
           +G+G FG V K   ++    +  A+KR+ +  SK   +++A E++++ +L  H N++ LL
Sbjct: 3   IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 62

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHLFKEN---------------SLLTWEFRYKIAQDLA 460
           G C  +  L L  E+ P+G+L   L K                 S L+ +     A D+A
Sbjct: 63  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 122

Query: 461 SGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG- 519
            G+ YL ++     +HRD+ + NI++  N+ AKI DFGL+R        Q   +  TMG 
Sbjct: 123 RGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGR 172

Query: 520 ----YMAPECATTGKASKESDVYSFGIVALEIA-------CGRK--PINPKAPQG 561
               +MA E       +  SDV+S+G++  EI        CG     +  K PQG
Sbjct: 173 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 227

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 83.0 bits (205), Expect = 1e-17
 Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 26/209 (12%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRV------SQGSKQGIKEYASEVKIISRLRHRNL 411
            ++G G FG V  G   E +  ++  RV      +  +      +  EV+    L H N+
Sbjct: 1   DEIGNGWFGKVLLG---EAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNV 57

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTW----EFRYKIAQDLASGLLYLQ 467
           +Q LG C E    LLV EF P G L ++L     ++      +   ++A ++ASGLL+L 
Sbjct: 58  LQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH 117

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV--LAGTMGYMAPEC 525
              +   +H D+   N  L ++ + KIGD+GLA L ++ +    T    A  + ++APE 
Sbjct: 118 ---QADFIHSDLALRNCQLTADLSVKIGDYGLA-LEQYPEDYYITKDCHAVPLRWLAPEL 173

Query: 526 AT-------TGKASKESDVYSFGIVALEI 547
                        +K+S+++S G+   E+
Sbjct: 174 VEIRGQDLLPKDQTKKSNIWSLGVTMWEL 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 83.3 bits (206), Expect = 2e-17
 Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 19/208 (9%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYA-SEVKIISRLRHRNLVQLL 415
           +K+G+G +G VYK   R TN  IA+K++  +   +G+   A  E+ ++  ++H N+V+L 
Sbjct: 8   EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
              H +K L LV+E++ +  L  H+     F +N  L   + Y+I      G+ Y     
Sbjct: 68  DVVHSEKRLYLVFEYL-DLDLKKHMDSSPDFAKNPRLIKTYLYQI----LRGIAYCH--- 119

Query: 471 EQCVVHRDIKSSNIMLDSNFNA-KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG 529
              V+HRD+K  N+++D   NA K+ DFGLAR       + T  +  T+ Y APE     
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVV-TLWYRAPEILLGS 178

Query: 530 KA-SKESDVYSFGIVALEIACGRKPINP 556
           +  S   D++S G +  E+   +KP+ P
Sbjct: 179 RHYSTPVDIWSVGCIFAEMV-NQKPLFP 205

Length = 294

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 82.8 bits (204), Expect = 2e-17
 Identities = 63/227 (27%), Positives = 116/227 (51%), Gaps = 33/227 (14%)

Query: 346 ELALATNDFNDDQKLGQGGFGGVYKGFF-----RETNSYIAVKRVSQGSKQGIKE-YASE 399
           E+ L+T  F ++  LG+  FG VYKG        E    +A+K +   ++  ++E +  E
Sbjct: 1   EINLSTVRFMEE--LGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHE 58

Query: 400 VKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN----------------GSLDSHLFKE 443
             + SRL+H N+V LLG   +++ L +++ +  +                GS D     +
Sbjct: 59  AMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVK 118

Query: 444 NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV 503
           ++L   +F + + Q +A+G+ +L       VVH+D+ + N+++    N KI D GL R V
Sbjct: 119 STLEPADFVHIVTQ-IAAGMEFLSSHH---VVHKDLATRNVLVFDKLNVKISDLGLFREV 174

Query: 504 ---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
              ++ K    ++L   + +M+PE    GK S +SD++S+G+V  E+
Sbjct: 175 YAADYYKLMGNSLLP--IRWMSPEAIMYGKFSIDSDIWSYGVVLWEV 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 83.1 bits (205), Expect = 3e-17
 Identities = 78/291 (26%), Positives = 137/291 (47%), Gaps = 51/291 (17%)

Query: 349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYI----AVKRVSQG-SKQGIKEYASEVKII 403
           L   +F   + LG G FG VYKG +      +    A+K + +  S +  KE   E  ++
Sbjct: 4   LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 63

Query: 404 SRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENS-------LLTWEFRYKIA 456
           + + + ++ +LLG C     + L+ + MP G L  ++ +E+        LL W       
Sbjct: 64  ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNW------C 115

Query: 457 QDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE------HAKGSQ 510
             +A G+ YL+E   + +VHRD+ + N+++ +  + KI DFGLA+L+       HA+G +
Sbjct: 116 VQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGK 172

Query: 511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWV 569
             +      +MA E       + +SDV+S+G+   E+   G KP +   P  ++S     
Sbjct: 173 VPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEIS----- 221

Query: 570 WDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
             +   G+ L    P +C       I+  MI+ + C   D + RP  R++I
Sbjct: 222 -SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDADSRPKFRELI 262

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 83.2 bits (206), Expect = 3e-17
 Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 25/210 (11%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQL--- 414
           +G+G +G V      ETN  +A+K+++      I  K    E+K++  L H N++ +   
Sbjct: 13  IGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDI 72

Query: 415 LGWCHEK--KELLLVYEFMPNGSLDSH-LFKENSLLTWEF-RYKIAQDLASGLLYLQEEW 470
           +   H +   ++ +VYE M     D H + + +  L+ +  +Y + Q L  GL Y+    
Sbjct: 73  MPPPHREAFNDVYIVYELM---DTDLHQIIRSSQTLSDDHCQYFLYQ-LLRGLKYIHS-- 126

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE----CA 526
              V+HRD+K SN++L++N + KI DFGLAR     KG   T    T  Y APE    C+
Sbjct: 127 -ANVLHRDLKPSNLLLNANCDLKICDFGLAR-TTSEKGDFMTEYVVTRWYRAPELLLNCS 184

Query: 527 TTGKASKESDVYSFGIVALEIACGRKPINP 556
               A    DV+S G +  E+  GRKP+ P
Sbjct: 185 EYTTA---IDVWSVGCIFAELL-GRKPLFP 210

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 82.6 bits (204), Expect = 3e-17
 Identities = 68/244 (27%), Positives = 115/244 (47%), Gaps = 44/244 (18%)

Query: 342 FPYKELALATNDFNDDQKLGQGGFGGVY-------KGFFRETNSY---------IAVKRV 385
           FP K L          +KLG+G FG V+       + F  +  S          +AVK +
Sbjct: 2   FPRKRLTF-------KEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKML 54

Query: 386 -SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD----SHL 440
               +K    ++  E+KI+SRL+  N+++LL  C     L ++ E+M NG L+     H 
Sbjct: 55  REDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHE 114

Query: 441 FKENSL------LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKI 494
            +E +       +++     +A  +ASG+ YL        VHRD+ + N ++  N+  KI
Sbjct: 115 PQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNCLVGKNYTIKI 171

Query: 495 GDFGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA--C 549
            DFG++R +   ++ +     VL   + +M+ E    GK +  SDV++FG+   EI   C
Sbjct: 172 ADFGMSRNLYSGDYYRIQGRAVLP--IRWMSWESILLGKFTTASDVWAFGVTLWEILTLC 229

Query: 550 GRKP 553
             +P
Sbjct: 230 KEQP 233

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 82.0 bits (202), Expect = 3e-17
 Identities = 69/276 (25%), Positives = 124/276 (44%), Gaps = 23/276 (8%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS---QGSKQGIKEYASEVKIISRLRHR 409
           +F  ++K+G+G F  VY+         +A+K+V        +  ++   E+ ++ +L H 
Sbjct: 3   NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHP 62

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDS---HLFKENSLLTWEFRYKIAQDLASGLLYL 466
           N+++ L    E  EL +V E    G L     +  K+  L+     +K    L S + ++
Sbjct: 63  NVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHM 122

Query: 467 QEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECA 526
                + V+HRDIK +N+ + +    K+GD GL R    +K +    L GT  YM+PE  
Sbjct: 123 HS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPERI 178

Query: 527 TTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL 586
                + +SD++S G +  E+A  + P          SL Q         K+ +   P L
Sbjct: 179 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-MNLFSLCQ---------KIEQCDYPPL 228

Query: 587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHV 622
             +   +++  L+ +   C +PD + RP I  V  +
Sbjct: 229 PTEHYSEKLRELVSM---CIYPDPDQRPDIGYVHQI 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 82.0 bits (203), Expect = 3e-17
 Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 44/220 (20%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYA-SEVKIISRLRHRNLVQLL 415
           +K+G+G +G VYK   + T   +A+K++  +   +G+   A  E+ ++  L H N+V+LL
Sbjct: 5   EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLL 64

Query: 416 GWCHEKKELLLVYEFM-----------PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLL 464
              H + +L LV+EF+           P   LD  L K        + Y++ Q    G+ 
Sbjct: 65  DVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKS-------YLYQLLQ----GIA 113

Query: 465 YLQEEWEQC----VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG---SQTTVLAGT 517
           Y       C    V+HRD+K  N+++D     K+ DFGLAR    A G      T    T
Sbjct: 114 Y-------CHSHRVLHRDLKPQNLLIDREGALKLADFGLAR----AFGVPVRTYTHEVVT 162

Query: 518 MGYMAPECATTGKA-SKESDVYSFGIVALEIACGRKPINP 556
           + Y APE     +  S   D++S G +  E+   R+P+ P
Sbjct: 163 LWYRAPEILLGSRQYSTPVDIWSIGCIFAEM-VNRRPLFP 201

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 81.1 bits (201), Expect = 5e-17
 Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 16/212 (7%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQG---IKEYASEVKIISRLRHRNLVQLLG 416
           + +G +G V+    + T    A+K + +        + +  +E  I+S+ +   +V+L  
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYY 60

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC-VV 475
               KK L LV E++P G L S L    SL     R  IA+ +   L YL        ++
Sbjct: 61  SFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAE-IVLALEYLH----SNGII 115

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLAR--LVEHAKG-----SQTTVLAGTMGYMAPECATT 528
           HRD+K  NI++DSN + K+ DFGL++  LV           +   + GT  Y+APE    
Sbjct: 116 HRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILG 175

Query: 529 GKASKESDVYSFGIVALEIACGRKPINPKAPQ 560
              SK  D +S G +  E   G  P + + P+
Sbjct: 176 QGHSKTVDWWSLGCILYEFLVGIPPFHGETPE 207

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 81.8 bits (202), Expect = 5e-17
 Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 31/273 (11%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           +LG+G +G VYK   R T   +A+K +  +  +    +   E+ I+ +     +V   G 
Sbjct: 8   ELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGA 67

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTW---EFRYKIAQDLASGLLYLQEEWEQCV 474
              +  + +  E+M  GSLD  L+           +   +I   +  GL +L+EE    +
Sbjct: 68  FFIEGAVYMCMEYMDAGSLDK-LYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN--I 124

Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPECATTGKASK 533
           +HRD+K +N++++ N   K+ DFG++  LV  A  ++T +  G   YMAPE   +G  ++
Sbjct: 125 IHRDVKPTNVLVNGNGQVKLCDFGVSGNLV--ASLAKTNI--GCQSYMAPERIKSGGPNQ 180

Query: 534 ------ESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC 587
                 +SDV+S G+  LE+A GR P  P+      + L           +++   P L 
Sbjct: 181 NPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLS---------AIVDGDPPTLP 231

Query: 588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
             +     +    V   C +   N RP+  Q++
Sbjct: 232 SGYSDDAQD---FVAK-CLNKIPNRRPTYAQLL 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 81.7 bits (202), Expect = 5e-17
 Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 28/213 (13%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYA-SEVKIISRLRHRNLVQL--- 414
           +G+G +G VYK   ++T   +A+K+V     K+G    A  E+KI+ +L HRN+V L   
Sbjct: 15  IGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEI 74

Query: 415 -------LGWCHEKKELLLVYEFMPN---GSLDSHL--FKENSLLTWEFRYKIAQDLASG 462
                  L +  +K    LV+E+M +   G L+S L  F E+ + +        + L  G
Sbjct: 75  VTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKS------FMKQLLEG 128

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
           L Y  +   +  +HRDIK SNI+L++    K+ DFGLARL    +    T    T+ Y  
Sbjct: 129 LNYCHK---KNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRP 185

Query: 523 PECATTGKASKES-DVYSFGIVALEIACGRKPI 554
           PE     +    + DV+S G +  E+   +KPI
Sbjct: 186 PELLLGEERYGPAIDVWSCGCILGELFT-KKPI 217

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 81.7 bits (202), Expect = 7e-17
 Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRL-RHRNLVQLL 415
           LG+G FG V     + T+   AVK + +        ++   +E ++++   +H  L QL 
Sbjct: 3   LGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLH 62

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
                K  L  V E++  G L  H+     F E     +      A ++  GL +L E  
Sbjct: 63  SCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFY------AAEIVLGLQFLHE-- 114

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT-VLAGTMGYMAPECATTG 529
            + +++RD+K  N++LDS  + KI DFG+ +  E   G  TT    GT  Y+APE  +  
Sbjct: 115 -RGIIYRDLKLDNVLLDSEGHIKIADFGMCK--EGILGGVTTSTFCGTPDYIAPEILSYQ 171

Query: 530 KASKESDVYSFGIVALEIACGRKP 553
                 D ++ G++  E+  G+ P
Sbjct: 172 PYGPAVDWWALGVLLYEMLAGQSP 195

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 80.5 bits (198), Expect = 1e-16
 Identities = 70/222 (31%), Positives = 113/222 (50%), Gaps = 22/222 (9%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           +G G +G VYKG   +T    A+K   V+   ++ IK+  + +K  S   HRN+    G 
Sbjct: 14  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH--HRNIATYYGA 71

Query: 418 CHEKK------ELLLVYEFMPNGSLDSHLFK--ENSLLTWEFRYKIAQDLASGLLYLQEE 469
             +K       +L LV EF   GS+ + L K  + + L  E+   I +++  GL +L + 
Sbjct: 72  FIKKNPPGMDDQLWLVMEFCGAGSV-TDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ- 129

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE---CA 526
               V+HRDIK  N++L  N   K+ DFG++  ++   G + T + GT  +MAPE   C 
Sbjct: 130 --HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACD 186

Query: 527 TTGKASKE--SDVYSFGIVALEIACGRKPINPKAPQGQVSLL 566
               A+ +  SD++S GI A+E+A G  P+    P   + L+
Sbjct: 187 ENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 228

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 80.4 bits (198), Expect = 1e-16
 Identities = 82/291 (28%), Positives = 134/291 (46%), Gaps = 51/291 (17%)

Query: 360 LGQGGFGGVYKGFF----RETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQL 414
           LG G FG VYKG +          +A+K + +  S +  KE   E  +++ +    + +L
Sbjct: 15  LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRL 74

Query: 415 LGWCHEKKELLLVYEFMPNGSLDSHLFKENS-------LLTWEFRYKIAQDLASGLLYLQ 467
           LG C     + LV + MP G L  ++ +EN        LL W         +A G+ YL+
Sbjct: 75  LGICLTST-VQLVTQLMPYGCLLDYV-RENKDRIGSQDLLNW------CVQIAKGMSYLE 126

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE------HAKGSQTTVLAGTMGYM 521
           E     +VHRD+ + N+++ S  + KI DFGLARL++      HA G +  +      +M
Sbjct: 127 EVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPI-----KWM 178

Query: 522 APECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLE 580
           A E     + + +SDV+S+G+   E+   G KP +   P  ++       DL   G+ L 
Sbjct: 179 ALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYD-GIPAREIP------DLLEKGERLP 231

Query: 581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPA 631
              P +C       I+  MI+ + C   D   RP  R+++   +  A  P+
Sbjct: 232 --QPPIC------TIDVYMIM-VKCWMIDSECRPRFRELVDEFSRMARDPS 273

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 80.1 bits (197), Expect = 1e-16
 Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 8/205 (3%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLV 412
           DF   Q++G G +G VYK     T    A+K +     +       E+ ++   +H N+V
Sbjct: 10  DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIV 69

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
              G    + +L +  EF   GSL         L   +  Y ++++   GL YL  + + 
Sbjct: 70  AYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAY-VSRETLQGLYYLHSKGK- 127

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT---G 529
             +HRDIK +NI+L  N + K+ DFG++  +      + + + GT  +MAPE A     G
Sbjct: 128 --MHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFI-GTPYWMAPEVAAVERKG 184

Query: 530 KASKESDVYSFGIVALEIACGRKPI 554
             ++  D+++ GI A+E+A  + P+
Sbjct: 185 GYNQLCDIWAVGITAIELAELQPPM 209

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 79.8 bits (197), Expect = 1e-16
 Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 13/203 (6%)

Query: 362 QGGFGGVYKGFFRETNSYIAVK---RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWC 418
           +G FG VY    R T  Y A+K   +    +K  +    +E  I+        V  L + 
Sbjct: 6   KGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYS 65

Query: 419 HEKKE-LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
            + K+ L LV E++  G   S L K    L  ++  +   ++  G+  L +   + ++HR
Sbjct: 66  FQSKDYLYLVMEYLNGGDCAS-LIKTLGGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHR 121

Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDV 537
           DIK  N+++D   + K+ DFGL+R     K        GT  Y+APE        K SD 
Sbjct: 122 DIKPENLLIDQTGHLKLTDFGLSRNGLENKK-----FVGTPDYLAPETILGVGDDKMSDW 176

Query: 538 YSFGIVALEIACGRKPINPKAPQ 560
           +S G V  E   G  P + + P 
Sbjct: 177 WSLGCVIFEFLFGYPPFHAETPD 199

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 80.4 bits (198), Expect = 1e-16
 Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 11/199 (5%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLG 416
           LG+GGFG V     R T    A K++ +     ++G     +E +I+ ++  R +V L  
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSL-A 66

Query: 417 WCHEKKE-LLLVYEFMPNGSLDSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCV 474
           + +E K+ L LV   M  G L  H++   N     +     A +L  GL  LQ E    +
Sbjct: 67  YAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER---I 123

Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKE 534
           V+RD+K  NI+LD   + +I D GLA  V+  +G       GT+GYMAPE     K +  
Sbjct: 124 VYRDLKPENILLDDRGHIRISDLGLA--VQIPEGETVRGRVGTVGYMAPEVINNEKYTFS 181

Query: 535 SDVYSFGIVALEIACGRKP 553
            D +  G +  E+  G+ P
Sbjct: 182 PDWWGLGCLIYEMIQGQSP 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 79.3 bits (195), Expect = 2e-16
 Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 8/206 (3%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL 411
           +D+   Q++G G +G VYK     T    AVK +             E+ ++   +H N+
Sbjct: 9   HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNI 68

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           V   G    +++L +  E+   GSL         L   +  Y + ++   GL YL  + +
Sbjct: 69  VAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAY-VCRETLQGLAYLHSKGK 127

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT---T 528
              +HRDIK +NI+L  N + K+ DFG+A  +      + + + GT  +MAPE A     
Sbjct: 128 ---MHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFI-GTPYWMAPEVAAVEKN 183

Query: 529 GKASKESDVYSFGIVALEIACGRKPI 554
           G  ++  D+++ GI A+E+A  + P+
Sbjct: 184 GGYNQLCDIWAVGITAIELAELQPPM 209

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 78.7 bits (194), Expect = 3e-16
 Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 27/203 (13%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHRNLVQLL 415
           +K+G+G FG       +E      +K +  S+ S +  +E   EV ++S ++H N+VQ  
Sbjct: 6   KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQ 65

Query: 416 GWCHEKKELLLVYEFMPNGSLDSH-------LFKENSLLTWEFRYKIAQDLASGLLYLQE 468
               E   L +V ++   G L          LF E+ +L W  +  +A         L+ 
Sbjct: 66  ESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLA---------LKH 116

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA----GTMGYMAPE 524
             ++ ++HRDIKS NI L  +   K+GDFG+AR++     + T  LA    GT  Y++PE
Sbjct: 117 VHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVL-----NSTVELARTCIGTPYYLSPE 171

Query: 525 CATTGKASKESDVYSFGIVALEI 547
                  + +SD+++ G V  E+
Sbjct: 172 ICENRPYNNKSDIWALGCVLYEM 194

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 79.3 bits (195), Expect = 3e-16
 Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 11/209 (5%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRN 410
           F   + LG+GGFG V     R T    A K++ +     ++G     +E +I+ ++  R 
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRF 61

Query: 411 LVQLLGWCHEKKE-LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKI-AQDLASGLLYLQE 468
           +V L  + +E K+ L LV   M  G L  H++        E R    A ++  GL  L +
Sbjct: 62  VVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ 120

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT 528
           E    +V+RD+K  NI+LD + + +I D GLA  V   +G       GT+GYMAPE    
Sbjct: 121 ER---IVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKN 175

Query: 529 GKASKESDVYSFGIVALEIACGRKPINPK 557
            + +   D ++ G +  E+  G+ P   +
Sbjct: 176 ERYTFSPDWWALGCLLYEMIAGQSPFQQR 204

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 80.1 bits (198), Expect = 3e-16
 Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 13/213 (6%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRH 408
            DF    ++GQGG+G V+    ++T   +A+KR+ +        ++   +E  I++  + 
Sbjct: 1   KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS 60

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
             LV+LL    + + L L  E++P G   + L     L     R+ +A+   +    +  
Sbjct: 61  EWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEA----VDA 116

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR-LVEHAKGSQTTVLAGTMGYMAPECAT 527
             E   +HRD+K  N ++D++ + K+ DFGL++ +V +A       + G+  YMAPE   
Sbjct: 117 LHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANS-----VVGSPDYMAPEVLR 171

Query: 528 TGKASKESDVYSFGIVALEIACGRKPINPKAPQ 560
                   D +S G +  E  CG  P +   P 
Sbjct: 172 GKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN 204

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 82.6 bits (204), Expect = 3e-16
 Identities = 86/354 (24%), Positives = 149/354 (42%), Gaps = 32/354 (9%)

Query: 277 KRRRKNRTA-LVVGLSLGGGVLVG----GVVLIIWLAGIGRKRKEGDEEDNQGFSEYIDD 331
           KR RK  +    +  +LG  +++     G V I     +  KR E   ED     ++ D 
Sbjct: 620 KRVRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVE--NEDGTWELQFFDS 677

Query: 332 EFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ 391
           +       K     ++  +  + N    + +G  G  YKG   +      VK ++     
Sbjct: 678 KVS-----KSITINDILSSLKEEN---VISRGKKGASYKGKSIKNGMQFVVKEIND--VN 727

Query: 392 GIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEF 451
            I    SE+  + +L+H N+V+L+G C  +K   L++E++   +L   L      L+WE 
Sbjct: 728 SIPS--SEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL----RNLSWER 781

Query: 452 RYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT 511
           R KIA  +A  L +L       VV  ++    I++D      +    L  L+        
Sbjct: 782 RRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL-RLSLPGLL-----CTD 835

Query: 512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWD 571
           T    +  Y+APE   T   +++SD+Y FG++ +E+  G+ P + +      S+++W   
Sbjct: 836 TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEF-GVHGSIVEWARY 894

Query: 572 LYGNGKLLEAVDPRLCRDFDGQQIE--RLMIVGLWCAHPDENLRPSIRQVIHVL 623
            Y +  L   +DP +  D    Q E   +M + L C   D   RP    V+  L
Sbjct: 895 CYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTL 948

Length = 968

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 78.9 bits (194), Expect = 3e-16
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 20/213 (9%)

Query: 358 QKLGQGGFGGVYKGFFRETNSY--IAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQ 413
           + LG+G FG V +G   + +S   +AVK  +++  ++  ++++ SE   +    H N+++
Sbjct: 5   KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMR 64

Query: 414 LLGWCHEKKEL------LLVYEFMPNGSLDSHLFKEN-----SLLTWEFRYKIAQDLASG 462
           L+G C +  E       +++  FM +G L S L           L  +   K   D+ASG
Sbjct: 65  LIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG 124

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYM 521
           + YL     +  +HRD+ + N ML+ N N  + DFGL++ + +     Q  +    + ++
Sbjct: 125 MEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWI 181

Query: 522 APECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           A E       + +SDV+SFG+   EIA  G+ P
Sbjct: 182 AIESLADRVYTTKSDVWSFGVTMWEIATRGQTP 214

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 79.9 bits (197), Expect = 3e-16
 Identities = 60/197 (30%), Positives = 89/197 (45%), Gaps = 8/197 (4%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLG 416
           LG+G FG V     + T  Y A+K + +    +K  +    +E +++   RH  L  L  
Sbjct: 3   LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKY 62

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
                  L  V E+   G L  HL +E        R+  A+ + S L YL       VV+
Sbjct: 63  SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE-IVSALGYLHS---CDVVY 118

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           RD+K  N+MLD + + KI DFGL +    + G+      GT  Y+APE        +  D
Sbjct: 119 RDLKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVD 177

Query: 537 VYSFGIVALEIACGRKP 553
            +  G+V  E+ CGR P
Sbjct: 178 WWGLGVVMYEMMCGRLP 194

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 79.0 bits (195), Expect = 3e-16
 Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 29/179 (16%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKR-VSQGSKQGIKEYA-SEVKIISRLRHRNLVQLLG 416
           K+G+G +G V+K   RET   +A+K+ V       IK+ A  E++++ +L+H NLV L+ 
Sbjct: 8   KIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIE 67

Query: 417 WCHEKKELLLVYEFM-----------PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
               K++L LV+E+            P G +  HL K           KI       + +
Sbjct: 68  VFRRKRKLHLVFEYCDHTVLNELEKNPRG-VPEHLIK-----------KIIWQTLQAVNF 115

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE 524
             +    C+ HRD+K  NI++      K+ DFG AR++       T  +A T  Y APE
Sbjct: 116 CHKH--NCI-HRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVA-TRWYRAPE 170

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 78.9 bits (194), Expect = 4e-16
 Identities = 68/212 (32%), Positives = 107/212 (50%), Gaps = 22/212 (10%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLL 415
           + +G G +G VYKG   +T    A+K   V++  ++ IK   + +K  S   HRN+    
Sbjct: 22  EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSH--HRNIATYY 79

Query: 416 GWCHEKK------ELLLVYEFMPNGSLDSHL--FKENSLLTWEFRYKIAQDLASGLLYLQ 467
           G   +K       +L LV EF   GS+   +   K N+L      Y I +++  GL +L 
Sbjct: 80  GAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAY-ICREILRGLAHLH 138

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE--- 524
                 V+HRDIK  N++L  N   K+ DFG++  ++   G + T + GT  +MAPE   
Sbjct: 139 A---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIA 194

Query: 525 CATTGKASKE--SDVYSFGIVALEIACGRKPI 554
           C     A+ +  SD++S GI A+E+A G  P+
Sbjct: 195 CDENPDATYDYRSDIWSLGITAIEMAEGAPPL 226

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 79.3 bits (195), Expect = 4e-16
 Identities = 63/198 (31%), Positives = 91/198 (45%), Gaps = 9/198 (4%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLG 416
           LG+G FG V     + T  Y A+K + +    +K  +    +E +++   RH  L  L  
Sbjct: 3   LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 62

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
                  L  V E+   G L  HL +E        R+  A+ + S L YL  E    VV+
Sbjct: 63  SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE-IVSALDYLHSEKN--VVY 119

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKES 535
           RD+K  N+MLD + + KI DFGL +  E  K G+      GT  Y+APE        +  
Sbjct: 120 RDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAV 177

Query: 536 DVYSFGIVALEIACGRKP 553
           D +  G+V  E+ CGR P
Sbjct: 178 DWWGLGVVMYEMMCGRLP 195

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 78.6 bits (194), Expect = 6e-16
 Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 13/213 (6%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS----KQGIKEYASEVKIISRLRH 408
           D    + +G G FG V+    R +  Y A+K ++       KQ  +   +E +++  + H
Sbjct: 2   DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQ-EQHVHNEKRVLKEVSH 60

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
             +++L    H+++ L ++ E++P G L S+L            +  A ++   L YL  
Sbjct: 61  PFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLF-YASEIVCALEYLHS 119

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT 528
              + +V+RD+K  NI+LD   + K+ DFG A+ +      +T  L GT  Y+APE   +
Sbjct: 120 ---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLR----DRTWTLCGTPEYLAPEVIQS 172

Query: 529 GKASKESDVYSFGIVALEIACGRKPINPKAPQG 561
              +K  D ++ GI+  E+  G  P     P G
Sbjct: 173 KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG 205

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 78.3 bits (193), Expect = 6e-16
 Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 28/218 (12%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLV 412
             ++  K+G+G  G V     + T   +AVK++    +Q  +   +EV I+   +H N+V
Sbjct: 20  YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIV 79

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLD---SHL-FKENSLLTWEFRYKIAQDLASGLLYLQE 468
           ++        EL +V EF+  G+L    +H    E  + T      +   +   L +L  
Sbjct: 80  EMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT------VCLAVLKALSFLHA 133

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV-------LAGTMGYM 521
              Q V+HRDIKS +I+L S+   K+ DFG          +Q +        L GT  +M
Sbjct: 134 ---QGVIHRDIKSDSILLTSDGRVKLSDFGFC--------AQVSKEVPRRKSLVGTPYWM 182

Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKPINPKAP 559
           APE  +      E D++S GI+ +E+  G  P   + P
Sbjct: 183 APEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP 220

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 78.6 bits (194), Expect = 6e-16
 Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 21/225 (9%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIK-EYASEVKIISRLRHRNLVQLLG 416
           ++G+G +G VY+     +   +A+K+V     + GI      E+ ++  LRH N+V+L  
Sbjct: 14  RIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKE 73

Query: 417 WCHEKK--ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK-IAQDLASGLLYLQEEWEQC 473
               K    + LV E+     L S L    +  + E + K +   L  GL YL E +   
Sbjct: 74  VVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFS-ESQVKCLMLQLLRGLQYLHENF--- 128

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE----CATTG 529
           ++HRD+K SN++L      KI DFGLAR         T  +  T+ Y APE    C T  
Sbjct: 129 IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVV-TLWYRAPELLLGCTTYT 187

Query: 530 KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG 574
            A    D+++ G +  E+    KP+ P     ++  L  +  L G
Sbjct: 188 TA---IDMWAVGCILAELLAH-KPLLPGK--SEIEQLDLIIQLLG 226

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 78.2 bits (192), Expect = 8e-16
 Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 30/283 (10%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           +K+GQG  G VY      T   +A+K+++   +   +   +E+ ++   ++ N+V  L  
Sbjct: 25  EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 84

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
                EL +V E++  GSL + +  E  +   +    + ++    L +L       V+HR
Sbjct: 85  YLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIA-AVCRECLQALDFLHSNQ---VIHR 139

Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDV 537
           DIKS NI+L  + + K+ DFG    +   +  ++T + GT  +MAPE  T      + D+
Sbjct: 140 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKVDI 198

Query: 538 YSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIER 597
           +S GI+A+E+  G  P   + P      L+ ++ +  NG       P L      Q  ER
Sbjct: 199 WSLGIMAIEMVEGEPPYLNENP------LRALYLIATNGT------PEL------QNPER 240

Query: 598 LMIVGL----WCAHPDENLRPSIRQVIH--VLNFEAPLPALPP 634
           L  V       C   D + R S ++++    L    PL +L P
Sbjct: 241 LSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLTP 283

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 78.4 bits (193), Expect = 9e-16
 Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 14/210 (6%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRN---LVQ 413
           +G+G FG VY+   ++T    A+K +S+      KE A    E  I+ R        +V 
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG 60

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC 473
           L        +L LV ++M  G L  HL KE        ++ IA+ +    L L+   +  
Sbjct: 61  LKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELV----LALEHLHKYD 116

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA-S 532
           +V+RD+K  NI+LD+  +  + DFGL++         T    GT  Y+APE     K  +
Sbjct: 117 IVYRDLKPENILLDATGHIALCDFGLSK-ANLTDNKTTNTFCGTTEYLAPEVLLDEKGYT 175

Query: 533 KESDVYSFGIVALEIACGRKPINPKAPQGQ 562
           K  D +S G++  E+ CG  P    A   Q
Sbjct: 176 KHVDFWSLGVLVFEMCCGWSPF--YAEDTQ 203

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 77.8 bits (191), Expect = 9e-16
 Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 32/284 (11%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLVQLLG 416
           +K+GQG  G V+      T   +A+K+++   KQ  KE   +E+ ++  L++ N+V  L 
Sbjct: 25  EKIGQGASGTVFTAIDVATGQEVAIKQINL-QKQPKKELIINEILVMKELKNPNIVNFLD 83

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
                 EL +V E++  GSL + +  E  +   +    + ++    L +L       V+H
Sbjct: 84  SFLVGDELFVVMEYLAGGSL-TDVVTETCMDEAQIA-AVCRECLQALEFLHANQ---VIH 138

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           RDIKS N++L  + + K+ DFG    +   +  ++T + GT  +MAPE  T      + D
Sbjct: 139 RDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKVD 197

Query: 537 VYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG----KLLEAVDPRLCRDFDG 592
           ++S GI+A+E+  G  P   + P      L+ ++ +  NG    +  E + P + RDF  
Sbjct: 198 IWSLGIMAIEMVEGEPPYLNENP------LRALYLIATNGTPELQNPEKLSP-IFRDFLN 250

Query: 593 QQIERLMIVGLWCAHPDENLRPSIRQVIH--VLNFEAPLPALPP 634
           +           C   D   R S ++++    L    PL +L P
Sbjct: 251 R-----------CLEMDVEKRGSAKELLQHPFLKLAKPLSSLTP 283

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 76.9 bits (189), Expect = 1e-15
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 18/209 (8%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYASEVKIISRLRHRNL 411
            +N  + +G+G FG         ++   A+K +    S   +++   E  ++++++H N+
Sbjct: 1   QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNI 60

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSL-------DSHLFKENSLLTWEFRYKIAQDLASGLL 464
           V           L +V E+   G L          LF E+++L W              L
Sbjct: 61  VAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQW---------FVQMCL 111

Query: 465 YLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE 524
            +Q   E+ V+HRDIKS NI L  N   K+GDFG ARL+    G+      GT  Y+ PE
Sbjct: 112 GVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP-GAYACTYVGTPYYVPPE 170

Query: 525 CATTGKASKESDVYSFGIVALEIACGRKP 553
                  + +SD++S G +  E+   + P
Sbjct: 171 IWENMPYNNKSDIWSLGCILYELCTLKHP 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 78.1 bits (193), Expect = 1e-15
 Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 25/225 (11%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK--QGIKEYASEVKIISRLRHRNLVQL 414
            + +G G +G V       +   +A+K++          K    E+KI+   +H N++ +
Sbjct: 10  IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAI 69

Query: 415 LGWCHEK----KELLLVYEFMPNGSLDSH-LFKENSLLTWE-FRYKIAQDLASGLLYLQE 468
                      K++ +V + M +   D H +   +  LT E  RY + Q L  GL Y+  
Sbjct: 70  RDILRPPGADFKDVYVVMDLMES---DLHHIIHSDQPLTEEHIRYFLYQ-LLRGLKYIHS 125

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL-----VEHAKGSQTTVLAGTMGYMAP 523
                V+HRD+K SN++++ +   +IGDFG+AR       EH K   T  +A T  Y AP
Sbjct: 126 ---ANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEH-KYFMTEYVA-TRWYRAP 180

Query: 524 ECA-TTGKASKESDVYSFGIVALEIACGRKPINP-KAPQGQVSLL 566
           E   +  + +   D++S G +  E+  GR+ + P K    Q+ L+
Sbjct: 181 ELLLSLPEYTTAIDMWSVGCIFAEM-LGRRQLFPGKNYVHQLKLI 224

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 78.1 bits (192), Expect = 1e-15
 Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 8/197 (4%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLG 416
           LG+G FG V     + T  Y A+K + +    +K  +    +E +++   RH  L  L  
Sbjct: 3   LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 62

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
                  L  V E+   G L  HL +E        R+  A+ + S L YL     + VV+
Sbjct: 63  AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE-IVSALEYLHS---RDVVY 118

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           RDIK  N+MLD + + KI DFGL +    + G+      GT  Y+APE        +  D
Sbjct: 119 RDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVD 177

Query: 537 VYSFGIVALEIACGRKP 553
            +  G+V  E+ CGR P
Sbjct: 178 WWGLGVVMYEMMCGRLP 194

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 77.2 bits (190), Expect = 1e-15
 Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 29/208 (13%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNL 411
           F   +K+G+G +G VYK   + T   +A+K++   ++ +G+   A  E+ ++  L H N+
Sbjct: 2   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 61

Query: 412 VQLLGWCHEKKELLLVYEFM-----------PNGSLDSHLFKENSLLTWEFRYKIAQDLA 460
           V+LL   H + +L LV+EF+           P   +   L K  S L           L 
Sbjct: 62  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIK--SYL---------FQLL 110

Query: 461 SGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGY 520
            GL +        V+HRD+K  N+++++    K+ DFGLAR       + T  +  T+ Y
Sbjct: 111 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 166

Query: 521 MAPECATTGK-ASKESDVYSFGIVALEI 547
            APE     K  S   D++S G +  E+
Sbjct: 167 RAPEILLGCKYYSTAVDIWSLGCIFAEM 194

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 78.1 bits (192), Expect = 1e-15
 Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 12/221 (5%)

Query: 343 PYKELALATNDFNDDQKLGQGGFGGVYKGFFRETN-SYIAVKRVSQGS---KQGIKEYAS 398
           P ++  +   DFN  + LG G FG V    ++  +   +A+KR  +     ++ +    S
Sbjct: 21  PKRKNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFS 80

Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E KI++ + H   V L G   ++  L LV EF+  G   + L + N     +     A  
Sbjct: 81  ERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFL-RRNKRFPNDVGCFYAAQ 139

Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM 518
           +     YLQ      +V+RD+K  N++LD +   K+ DFG A++V+    ++T  L GT 
Sbjct: 140 IVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD----TRTYTLCGTP 192

Query: 519 GYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAP 559
            Y+APE        K +D ++ GI   EI  G  P     P
Sbjct: 193 EYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP 233

Length = 340

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 76.9 bits (189), Expect = 2e-15
 Identities = 61/204 (29%), Positives = 92/204 (45%), Gaps = 9/204 (4%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRN 410
           F   + LG+GGFG V     R T    A KR+ +     ++G     +E +I+ ++  + 
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQF 61

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEE 469
           +V L      K  L LV   M  G L  H++   N     E     A ++  GL  L  E
Sbjct: 62  VVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE 121

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG 529
                V+RD+K  NI+LD   + +I D GLA  V+  +G       GT+GYMAPE     
Sbjct: 122 ---NTVYRDLKPENILLDDYGHIRISDLGLA--VKIPEGESIRGRVGTVGYMAPEVLNNQ 176

Query: 530 KASKESDVYSFGIVALEIACGRKP 553
           + +   D +  G +  E+  G+ P
Sbjct: 177 RYTLSPDYWGLGCLIYEMIEGQSP 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 76.9 bits (190), Expect = 2e-15
 Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 37/197 (18%)

Query: 344 YKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYASEVKI 402
           Y+ELA           +G+G +G VYK     T  ++A+K+V    S++GI    S ++ 
Sbjct: 1   YEELAE----------IGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIP--LSTLRE 48

Query: 403 ISRLR------HRNLVQLLGWCH-----EKKELLLVYEFMPNGSLDSHLFKEN----SLL 447
           I+ L+      H N+V+LL  CH      + +L LV+E +     D   +        L 
Sbjct: 49  IALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ---DLATYLSKCPKPGLP 105

Query: 448 TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK 507
               +  + Q L  G+ +L       +VHRD+K  NI++ S+   KI DFGLAR+     
Sbjct: 106 PETIKDLMRQ-LLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEM 161

Query: 508 GSQTTVLAGTMGYMAPE 524
            + T+V+  T+ Y APE
Sbjct: 162 -ALTSVVV-TLWYRAPE 176

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 76.6 bits (188), Expect = 2e-15
 Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 6/201 (2%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWC 418
           K+G+G  G V     + +   +AVK++    +Q  +   +EV I+   +H N+V++    
Sbjct: 27  KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86

Query: 419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
               EL +V EF+  G+L       ++ +  E   +IA    + L  L     Q V+HRD
Sbjct: 87  LVGDELWVVMEFLEGGALTD--IVTHTRMNEE---QIAAVCLAVLKALSVLHAQGVIHRD 141

Query: 479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVY 538
           IKS +I+L  +   K+ DFG    V      + + L GT  +MAPE  +      E D++
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS-LVGTPYWMAPELISRLPYGPEVDIW 200

Query: 539 SFGIVALEIACGRKPINPKAP 559
           S GI+ +E+  G  P   + P
Sbjct: 201 SLGIMVIEMVDGEPPYFNEPP 221

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 77.2 bits (190), Expect = 3e-15
 Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 23/230 (10%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS----KQGIKEYASEVKIISRLRH 408
           DF   + LG G FG V     + T  Y A+K + +      KQ ++  A E  I+  L H
Sbjct: 19  DFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQ-VQHVAQEKSILMELSH 77

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
             +V ++    ++  +  + EF+  G L +HL K        F   +A+   + L+   E
Sbjct: 78  PFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAG-----RFPNDVAKFYHAELVLAFE 132

Query: 469 EWEQC-VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT 527
                 +++RD+K  N++LD+  + K+ DFG A+ V      +T  L GT  Y+APE   
Sbjct: 133 YLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP----DRTFTLCGTPEYLAPEVIQ 188

Query: 528 TGKASKESDVYSFGIVALEIACGRKPINPKAP--------QGQVSLLQWV 569
           +    K  D ++ G++  E   G  P     P         G++    W 
Sbjct: 189 SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWF 238

Length = 329

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 77.0 bits (189), Expect = 3e-15
 Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 22/208 (10%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLVQLLG 416
           +KLG+G +  V+KG  + T + +A+K +    ++G    A  EV ++  L+H N+V L  
Sbjct: 12  EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 71

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWE----FRYKIAQDLASGLLYLQEEWEQ 472
             H  K L LV+E++ +  L  ++    ++++      F Y+I +    GL Y      +
Sbjct: 72  IVHTDKSLTLVFEYL-DKDLKQYMDDCGNIMSMHNVKIFLYQILR----GLAYCHR---R 123

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECAT-T 528
            V+HRD+K  N++++     K+ DFGLAR    AK   T   +    T+ Y  P+    +
Sbjct: 124 KVLHRDLKPQNLLINERGELKLADFGLAR----AKSVPTKTYSNEVVTLWYRPPDVLLGS 179

Query: 529 GKASKESDVYSFGIVALEIACGRKPINP 556
            + S + D++  G +  E+A GR P+ P
Sbjct: 180 SEYSTQIDMWGVGCIFFEMASGR-PLFP 206

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 77.0 bits (190), Expect = 3e-15
 Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 20/204 (9%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKI---ISRLRHRNLVQ 413
           LG+G FG V    +++T    A+K + +G   ++  ++    E +I    +  RH  LV 
Sbjct: 7   LGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVN 66

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS----GLLYLQEE 469
           L      +  +  V E+   G L  H+  +       F    A   A+    GL YL E 
Sbjct: 67  LFACFQTEDHVCFVMEYAAGGDLMMHIHTD------VFSEPRAVFYAACVVLGLQYLHE- 119

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG 529
               +V+RD+K  N++LD+    KI DFGL +      G +T+   GT  ++APE  T  
Sbjct: 120 --NKIVYRDLKLDNLLLDTEGFVKIADFGLCK-EGMGFGDRTSTFCGTPEFLAPEVLTET 176

Query: 530 KASKESDVYSFGIVALEIACGRKP 553
             ++  D +  G++  E+  G  P
Sbjct: 177 SYTRAVDWWGLGVLIYEMLVGESP 200

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 76.6 bits (188), Expect = 3e-15
 Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 40/244 (16%)

Query: 332 EFERGAGPK-RFPYKELALATNDFNDDQKLGQGGFG--------GVYKGFFRETNSYIAV 382
           E+E    P+  F   +L L        + LG+G FG        G+ K   +E  + +AV
Sbjct: 1   EYELPEDPRWEFSRDKLTLG-------KPLGEGCFGQVVMAEALGIDKDKPKEAVT-VAV 52

Query: 383 KRVS-QGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           K +    +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L  +L
Sbjct: 53  KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 112

Query: 441 FKENSLLTWEFRYKIAQ----------------DLASGLLYLQEEWEQCVVHRDIKSSNI 484
            +       E+ Y IA+                 +A G+ YL  +  +C+ HRD+ + N+
Sbjct: 113 -RARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ--KCI-HRDLAARNV 168

Query: 485 MLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIV 543
           ++  N   KI DFGLAR V +     +TT     + +MAPE       + +SDV+SFG++
Sbjct: 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 228

Query: 544 ALEI 547
             EI
Sbjct: 229 MWEI 232

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 75.8 bits (186), Expect = 4e-15
 Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 6/201 (2%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWC 418
           K+G+G  G V     + +   +AVK +    +Q  +   +EV I+   +H+N+V++    
Sbjct: 28  KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY 87

Query: 419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
              +EL ++ EF+  G+L        + L  E    + + +   L YL     Q V+HRD
Sbjct: 88  LVGEELWVLMEFLQGGALTD--IVSQTRLNEEQIATVCESVLQALCYLHS---QGVIHRD 142

Query: 479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVY 538
           IKS +I+L  +   K+ DFG    +      + + L GT  +MAPE  +      E D++
Sbjct: 143 IKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS-LVGTPYWMAPEVISRTPYGTEVDIW 201

Query: 539 SFGIVALEIACGRKPINPKAP 559
           S GI+ +E+  G  P    +P
Sbjct: 202 SLGIMVIEMVDGEPPYFSDSP 222

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 75.4 bits (185), Expect = 5e-15
 Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 32/212 (15%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRV------SQGSKQGIKEYASEVKIISRLRHRNL 411
           +++G G FG V  G   E NS     +V         S Q   ++  E +    L+H NL
Sbjct: 1   KEIGNGWFGKVILG---EVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNL 57

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHL--FKENSLLTWEFR--YKIAQDLASGLLYLQ 467
           +Q LG C E    LLV EF P G L  +L   ++  L+T +     ++A ++A GLL+L 
Sbjct: 58  LQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH 117

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGY-----MA 522
              +   +H D+   N +L ++   KIGD+GL+    H K  +   +     +     +A
Sbjct: 118 ---KNNFIHSDLALRNCLLTADLTVKIGDYGLS----HNKYKEDYYVTPDQLWVPLRWIA 170

Query: 523 PECA-------TTGKASKESDVYSFGIVALEI 547
           PE              +KES+V+S G+   E+
Sbjct: 171 PELVDEVHGNLLVVDQTKESNVWSLGVTIWEL 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 75.8 bits (186), Expect = 5e-15
 Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 6/201 (2%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWC 418
           K+G+G  G V     + T   +AVK++    +Q  +   +EV I+    H N+V +    
Sbjct: 29  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY 88

Query: 419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
               EL +V EF+  G+L       ++ +  E    +   +   L YL     Q V+HRD
Sbjct: 89  LVGDELWVVMEFLEGGALTD--IVTHTRMNEEQIATVCLSVLRALSYLHN---QGVIHRD 143

Query: 479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVY 538
           IKS +I+L S+   K+ DFG    V      + + L GT  +MAPE  +      E D++
Sbjct: 144 IKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKS-LVGTPYWMAPEVISRLPYGTEVDIW 202

Query: 539 SFGIVALEIACGRKPINPKAP 559
           S GI+ +E+  G  P   + P
Sbjct: 203 SLGIMVIEMIDGEPPYFNEPP 223

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 75.8 bits (186), Expect = 6e-15
 Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 37/232 (15%)

Query: 342 FPYKELALATNDFNDDQKLGQGGFGGVYK----GFFR---ETNSYIAVKRVS-QGSKQGI 393
           FP   L L        + LG+G FG V +    G  +   +    +AVK +    + + +
Sbjct: 9   FPRDRLVLG-------KPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDL 61

Query: 394 KEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKE--------- 443
            +  SE++++  + +H+N++ LLG C ++  L ++ E+   G+L   L            
Sbjct: 62  ADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTF 121

Query: 444 ------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
                    L+++     A  +A G+ YL  E  +C+ HRD+ + N+++  +   KI DF
Sbjct: 122 DITKVPEEQLSFKDLVSCAYQVARGMEYL--ESRRCI-HRDLAARNVLVTEDNVMKIADF 178

Query: 498 GLARLVEHAKGSQTTVLAGTM--GYMAPECATTGKASKESDVYSFGIVALEI 547
           GLAR V      + T   G +   +MAPE       + +SDV+SFGI+  EI
Sbjct: 179 GLARGVHDIDYYKKTS-NGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEI 229

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 75.2 bits (185), Expect = 7e-15
 Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 29/208 (13%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEV------KIISRLRHRNLVQ 413
           LG+GGFG V     R T    A K++    K+ IK+   E       +I+ ++  R +V 
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLE---KKRIKKRKGEAMALNEKQILEKVNSRFVVS 64

Query: 414 LLGWCHEKKE-LLLVYEFMPNGSLDSHL-------FKENSLLTWEFRYKIAQDLASGLLY 465
           L  + +E K+ L LV   M  G L  H+       F E   + +      A ++  GL  
Sbjct: 65  L-AYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFY------AAEITCGLED 117

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           L  E    +V+RD+K  NI+LD   + +I D GLA  VE  +G       GT+GYMAPE 
Sbjct: 118 LHRER---IVYRDLKPENILLDDYGHIRISDLGLA--VEIPEGETIRGRVGTVGYMAPEV 172

Query: 526 ATTGKASKESDVYSFGIVALEIACGRKP 553
               + +   D +  G +  E+  G+ P
Sbjct: 173 VKNERYTFSPDWWGLGCLIYEMIEGKSP 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 75.1 bits (184), Expect = 8e-15
 Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 10/198 (5%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           +K+GQG  G VY      T   +A+++++   +   +   +E+ ++   ++ N+V  L  
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
                EL +V E++  GSL + +  E  +   +    + ++    L +L       V+HR
Sbjct: 86  YLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIA-AVCRECLQALEFLHSNQ---VIHR 140

Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKASKES 535
           DIKS NI+L  + + K+ DFG    +  E +K S    + GT  +MAPE  T      + 
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST---MVGTPYWMAPEVVTRKAYGPKV 197

Query: 536 DVYSFGIVALEIACGRKP 553
           D++S GI+A+E+  G  P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 75.0 bits (184), Expect = 8e-15
 Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 14/203 (6%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLVQLLGW 417
           KLG+G +  VYKG  + T++ +A+K +    ++G    A  EV ++  L+H N+V L   
Sbjct: 13  KLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 72

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
            H +K L LV+E++ +  L  +L    + +           L  GL Y      + V+HR
Sbjct: 73  IHTEKSLTLVFEYL-DKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHR---RKVLHR 128

Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECAT-TGKASK 533
           D+K  N++++     K+ DFGLAR    AK   T   +    T+ Y  P+    +   S 
Sbjct: 129 DLKPQNLLINERGELKLADFGLAR----AKSIPTKTYSNEVVTLWYRPPDILLGSTDYST 184

Query: 534 ESDVYSFGIVALEIACGRKPINP 556
           + D++  G +  E++ GR P+ P
Sbjct: 185 QIDMWGVGCIFYEMSTGR-PLFP 206

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 75.1 bits (184), Expect = 1e-14
 Identities = 60/198 (30%), Positives = 91/198 (45%), Gaps = 10/198 (5%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLG 416
           LG+G FG V     + +  Y A+K + +    +K  +    +E +++   RH  L  L  
Sbjct: 3   LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKY 62

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
               K  L  V E++  G L  HL +E        R+  A+ + S L YL       +V+
Sbjct: 63  SFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAE-IVSALDYLHS---GKIVY 118

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT-TVLAGTMGYMAPECATTGKASKES 535
           RD+K  N+MLD + + KI DFGL +  E    + T     GT  Y+APE        +  
Sbjct: 119 RDLKLENLMLDKDGHIKITDFGLCK--EGITDAATMKTFCGTPEYLAPEVLEDNDYGRAV 176

Query: 536 DVYSFGIVALEIACGRKP 553
           D +  G+V  E+ CGR P
Sbjct: 177 DWWGLGVVMYEMMCGRLP 194

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 73.4 bits (180), Expect = 2e-14
 Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 41/214 (19%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-------------SEVKIIS 404
           Q+LG+G FG VY             K V++   + +KE                E +++S
Sbjct: 6   QRLGKGSFGTVY--------LVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLS 57

Query: 405 RLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---------FKENSLLTWEFRYKI 455
           +L H  +V+      E+    ++ E+     LD  L           EN +  W  +   
Sbjct: 58  KLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQ--- 114

Query: 456 AQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA 515
              L  G+ Y+ +   + ++HRD+K+ NI L +N   KIGDFG++RL+  +    TT   
Sbjct: 115 ---LLLGVHYMHQ---RRILHRDLKAKNIFLKNNL-LKIGDFGVSRLLMGSCDLATT-FT 166

Query: 516 GTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
           GT  YM+PE         +SD++S G +  E+ C
Sbjct: 167 GTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCC 200

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 74.3 bits (182), Expect = 2e-14
 Identities = 77/293 (26%), Positives = 140/293 (47%), Gaps = 45/293 (15%)

Query: 358 QKLGQGGFGGVYK----GFFRETNSYI---AVKRV-SQGSKQGIKEYASEVKIISRL-RH 408
           + LG+G FG V      G  +E  + +   AVK + S  +++ + +  SE++++  + +H
Sbjct: 24  KPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 83

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKE---------------NSLLTWEFRY 453
           +N++ LLG C +   L ++ E+   G+L  +L                     L+++   
Sbjct: 84  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLV 143

Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK-GSQTT 512
             A  +A G+ YL  +  +C+ HRD+ + N+++  +   KI DFGLAR + H     +TT
Sbjct: 144 SCAYQVARGMEYLASK--KCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 200

Query: 513 VLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWD 571
                + +MAPE       + +SDV+SFG++  EI   G  P  P  P         V +
Sbjct: 201 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY-PGVP---------VEE 250

Query: 572 LYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           L+   KLL+    R+ +  +      +M+   W A P +  RP+ +Q++  L+
Sbjct: 251 LF---KLLKE-GHRMDKPSNCTNELYMMMRDCWHAVPSQ--RPTFKQLVEDLD 297

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 73.1 bits (179), Expect = 3e-14
 Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 21/216 (9%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIK-EYASEVKIISRLR---HRNLVQ 413
           ++G G +G VYK     +  ++A+K V  Q ++ G+      EV ++ RL    H N+V+
Sbjct: 7   EIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVR 66

Query: 414 LLGWC-----HEKKELLLVYEFMPNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQ 467
           L+  C       + ++ LV+E + +  L ++L K     L  E    + +    GL +L 
Sbjct: 67  LMDVCATSRTDRETKVTLVFEHV-DQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH 125

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT 527
                C+VHRD+K  NI++ S    K+ DFGLAR+          V+  T+ Y APE   
Sbjct: 126 A---NCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVV--TLWYRAPEVLL 180

Query: 528 TGKASKESDVYSFGIVALEIACGRKPI---NPKAPQ 560
               +   D++S G +  E+   RKP+   N +A Q
Sbjct: 181 QSTYATPVDMWSVGCIFAEMF-RRKPLFCGNSEADQ 215

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 73.1 bits (179), Expect = 4e-14
 Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 15/203 (7%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           +G+G +G V K   +ET   +A+K+   S+ +++  +    E+K++  L+  N+V+L   
Sbjct: 9   VGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEA 68

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKE--NSLLTWEFRYKIAQDLASGLLYLQEEW--EQC 473
              + +L LV+E++    L+  L +E  N +   + R  I Q      L     W  +  
Sbjct: 69  FRRRGKLYLVFEYVEKNMLE--LLEEMPNGVPPEKVRSYIYQ------LIKAIHWCHKND 120

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASK 533
           +VHRDIK  N+++  N   K+ DFG AR +     +  T    T  Y +PE        K
Sbjct: 121 IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGK 180

Query: 534 ESDVYSFGIVALEIACGRKPINP 556
             D++S G +  E++ G +P+ P
Sbjct: 181 AVDMWSVGCILGELSDG-QPLFP 202

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 72.7 bits (178), Expect = 4e-14
 Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 14/205 (6%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLVQLLGW 417
           KLG+G +  V+KG  + T + +A+K +    ++G    A  EV ++  L+H N+V L   
Sbjct: 12  KLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDI 71

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
            H ++ L LV+E++ +  L  +L    +L++          L  GL Y  +   + ++HR
Sbjct: 72  IHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHK---RKILHR 127

Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECAT-TGKASK 533
           D+K  N++++     K+ DFGLAR    AK   T   +    T+ Y  P+    + + S 
Sbjct: 128 DLKPQNLLINEKGELKLADFGLAR----AKSVPTKTYSNEVVTLWYRPPDVLLGSTEYST 183

Query: 534 ESDVYSFGIVALEIACGRKPINPKA 558
             D++  G +  E+A GR P+ P +
Sbjct: 184 PIDMWGVGCILYEMATGR-PMFPGS 207

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 73.4 bits (181), Expect = 5e-14
 Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 21/211 (9%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQ--GSKQGIKEYASEVKIISRLR-HRNLVQL 414
           QKLG+G +G V+K   R T   +A+K++     +    +    E+  +  L  H N+V+L
Sbjct: 13  QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKL 72

Query: 415 LGWCHEK--KELLLVYEFMPNGSLDSH-LFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           L     +  K++ LV+E+M     D H + + N L     RY + Q L   L Y+     
Sbjct: 73  LNVIKAENDKDIYLVFEYMET---DLHAVIRANILEDVHKRYIMYQ-LLKALKYIHS--- 125

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT----TVLAGTMGYMAPEC-- 525
             V+HRD+K SNI+L+S+   K+ DFGLAR +   + +      T    T  Y APE   
Sbjct: 126 GNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILL 185

Query: 526 ATTGKASKESDVYSFGIVALEIACGRKPINP 556
            +T + +K  D++S G +  E+  G KP+ P
Sbjct: 186 GST-RYTKGVDMWSVGCILGEMLLG-KPLFP 214

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 72.9 bits (179), Expect = 6e-14
 Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 18/204 (8%)

Query: 360 LGQGGFGGVY---KGFFRETNSYIAVKRVSQGS-KQGIKEYA---SEVKIISRLRHRNLV 412
           LG+GG+G V+   K    +T    A+K + + +  +  K+ A   +E  I+  ++H  +V
Sbjct: 4   LGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIV 63

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLL--TWEFRYKIAQDLASGLLYLQEEW 470
            L+       +L L+ E++  G L  HL +E   +  T  F       L+   L L+   
Sbjct: 64  DLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFY------LSEISLALEHLH 117

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH-AKGSQTTVLAGTMGYMAPECATTG 529
           +Q +++RD+K  NI+LD+  + K+ DFGL +  E   +G+ T    GT+ YMAPE     
Sbjct: 118 QQGIIYRDLKPENILLDAQGHVKLTDFGLCK--ESIHEGTVTHTFCGTIEYMAPEILMRS 175

Query: 530 KASKESDVYSFGIVALEIACGRKP 553
              K  D +S G +  ++  G  P
Sbjct: 176 GHGKAVDWWSLGALMYDMLTGAPP 199

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 72.9 bits (179), Expect = 6e-14
 Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 25/206 (12%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW-- 417
           LG+G FG V     + TN + A+K +    K+ +     +V+     R    V  L W  
Sbjct: 3   LGKGSFGKVMLAELKGTNEFFAIKAL----KKDVVLEDDDVECTMVERR---VLALAWEH 55

Query: 418 ---CH------EKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKI-AQDLASGLLYLQ 467
               H       K+ L  V E++  G L  H+  ++S    E R +  A ++  GL +L 
Sbjct: 56  PFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHI--QSSGRFDEARARFYAAEIICGLQFLH 113

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT 527
           ++    +++RD+K  N++LD + + KI DFG+ +   + +G  +T   GT  Y+APE   
Sbjct: 114 KKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST-FCGTPDYIAPEILK 169

Query: 528 TGKASKESDVYSFGIVALEIACGRKP 553
             K ++  D +SFG++  E+  G+ P
Sbjct: 170 GQKYNESVDWWSFGVLLYEMLIGQSP 195

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 73.1 bits (180), Expect = 7e-14
 Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 19/201 (9%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW 417
           +G G +G V   F  +T   +A+K++S+  +  I  K    E++++  + H N++ LL  
Sbjct: 23  VGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDV 82

Query: 418 CHEKKEL------LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
                 L       LV   M  G+  +++ K   L     ++ + Q L  GL Y+     
Sbjct: 83  FTPASSLEDFQDVYLVTHLM--GADLNNIVKCQKLSDDHIQFLVYQIL-RGLKYIHS--- 136

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT-GK 530
             ++HRD+K SNI ++ +   KI DFGLAR  +     + T    T  Y APE       
Sbjct: 137 AGIIHRDLKPSNIAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 192

Query: 531 ASKESDVYSFGIVALEIACGR 551
            ++  D++S G +  E+  G+
Sbjct: 193 YNQTVDIWSVGCIMAELLTGK 213

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 72.3 bits (177), Expect = 8e-14
 Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 8/197 (4%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLG 416
           +G+G FG V +   R+T    A+K + +    S+  +    +E  +++++    +V L  
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKF 60

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
                ++L LV  F+  G L  HL +E        R+  A+ L      L+   +  V++
Sbjct: 61  SFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELL----CALENLHKFNVIY 116

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           RD+K  NI+LD   +  + DFGL +L       +T    GT  Y+APE       +K  D
Sbjct: 117 RDLKPENILLDYQGHIALCDFGLCKL-NMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVD 175

Query: 537 VYSFGIVALEIACGRKP 553
            ++ G++  E+  G  P
Sbjct: 176 WWTLGVLLYEMLTGLPP 192

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 72.1 bits (177), Expect = 1e-13
 Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 11/199 (5%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKI-ISRLRHRNLVQLL 415
           +G+G FG V     +    + AVK + + +   K+  K   +E  + +  ++H  LV L 
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLH 62

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
                  +L  V +++  G L  HL +E S      R+  A ++AS L YL       ++
Sbjct: 63  YSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARF-YAAEIASALGYLHS---LNII 118

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT-VLAGTMGYMAPECATTGKASKE 534
           +RD+K  NI+LDS  +  + DFGL +  E  + S+TT    GT  Y+APE        + 
Sbjct: 119 YRDLKPENILLDSQGHVVLTDFGLCK--EGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRT 176

Query: 535 SDVYSFGIVALEIACGRKP 553
            D +  G V  E+  G  P
Sbjct: 177 VDWWCLGAVLYEMLYGLPP 195

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 71.3 bits (175), Expect = 1e-13
 Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 23/205 (11%)

Query: 360 LGQGGFGGVYKGFFRE-----TNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQ 413
           LG+G FG V+    +        + + VK + +   + ++ E+  E+ +  +L H+N+V+
Sbjct: 13  LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVR 72

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLF----KENSL----LTWEFRYKIAQDLASGLLY 465
           LLG C E +   ++ E+   G L   L     K+  L    L+ + +  +   +A G+ +
Sbjct: 73  LLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDH 132

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV---EHAKGSQTTVLAGTMGYMA 522
           L        VHRD+ + N ++ S    K+    L++ V   E+ K     +    + ++A
Sbjct: 133 LSNAR---FVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALI---PLRWLA 186

Query: 523 PECATTGKASKESDVYSFGIVALEI 547
           PE       S +SDV+SFG++  E+
Sbjct: 187 PEAVQEDDFSTKSDVWSFGVLMWEV 211

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 71.9 bits (176), Expect = 1e-13
 Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 13/202 (6%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIIS-RLRHRNLVQLL 415
           LG+G FG V+    + TN + A+K + +        ++    E +++S    H  L  L 
Sbjct: 3   LGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLY 62

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCV 474
                K+ L  V E++  G L  H+   +   L     Y  A ++  GL +L     + +
Sbjct: 63  CTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFY--AAEIICGLQFLHS---KGI 117

Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASK 533
           V+RD+K  NI+LD++ + KI DFG+ +  E+  G ++T    GT  Y+APE     K + 
Sbjct: 118 VYRDLKLDNILLDTDGHIKIADFGMCK--ENMLGDAKTCTFCGTPDYIAPEILLGQKYNT 175

Query: 534 ESDVYSFGIVALEIACGRKPIN 555
             D +SFG++  E+  G+ P +
Sbjct: 176 SVDWWSFGVLLYEMLIGQSPFH 197

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 71.2 bits (174), Expect = 2e-13
 Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 15/222 (6%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLVQLLG 416
           +KLG+G +  VYKG  R     +A+K +S  +++G+   A  E  ++  L+H N+V L  
Sbjct: 11  EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHD 70

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
             H K+ L  V+E+M        +     L  +  R  + Q L  GL Y+     Q ++H
Sbjct: 71  IIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQ-LLRGLAYIHG---QHILH 126

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG--SQT-TVLAGTMGYMAPECAT-TGKAS 532
           RD+K  N+++      K+ DFGLAR    AK   SQT +    T+ Y  P+        S
Sbjct: 127 RDLKPQNLLISYLGELKLADFGLAR----AKSIPSQTYSSEVVTLWYRPPDVLLGATDYS 182

Query: 533 KESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG 574
              D++  G + +E+  G +P  P        L + +W + G
Sbjct: 183 SALDIWGAGCIFIEMLQG-QPAFPGVSDVFEQLEK-IWTVLG 222

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 71.2 bits (174), Expect = 2e-13
 Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 26/239 (10%)

Query: 342 FPYKELALATNDFNDD-------QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIK 394
           FPY    L      D        + +G+G +G VYK   ++  S  AVK +   S    +
Sbjct: 5   FPYNSSMLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVD-E 63

Query: 395 EYASEVKIISRL-RHRNLVQLLGWCHEKK-----ELLLVYEFMPNGSLDSHLFKENSLLT 448
           E  +E  I+  L  H N+V+  G  ++       +L LV E    GS+ + L K   LL 
Sbjct: 64  EIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSV-TELVK--GLLI 120

Query: 449 WEFRYK---IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH 505
              R     I+  L   LL LQ      ++HRD+K +NI+L +    K+ DFG++  +  
Sbjct: 121 CGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTS 180

Query: 506 AKGSQTTVLAGTMGYMAPE---CATTGKASKES--DVYSFGIVALEIACGRKPINPKAP 559
            +  + T + GT  +MAPE   C      S ++  DV+S GI A+E+  G  P+    P
Sbjct: 181 TRLRRNTSV-GTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP 238

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 71.7 bits (176), Expect = 2e-13
 Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 36/222 (16%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQ 413
           + D + LG G  G V+     + +  +AVK++     Q +K    E+KII RL H N+V+
Sbjct: 7   YMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 66

Query: 414 L--------------LGWCHEKKELLLVYEFMPNGSLDSHLFK--ENSLLTWEFRYKIAQ 457
           +              +G   E   + +V E+M     ++ L    E   L+ E       
Sbjct: 67  VYEVLGPSGSDLTEDVGSLTELNSVYIVQEYM-----ETDLANVLEQGPLSEEHARLFMY 121

Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLARLV----EHAKG--SQ 510
            L  GL Y+       V+HRD+K +N+ +++ +   KIGDFGLAR+V     H KG  S+
Sbjct: 122 QLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH-KGYLSE 177

Query: 511 TTVLAGTMGYMAPECA-TTGKASKESDVYSFGIVALEIACGR 551
             V   T  Y +P    +    +K  D+++ G +  E+  G+
Sbjct: 178 GLV---TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 216

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 71.1 bits (174), Expect = 3e-13
 Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 9/200 (4%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQL 414
           + LG+G FG V     +E+    AVK + +        ++   +E +I+S  R+   +  
Sbjct: 1   RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 60

Query: 415 LGWCHEKKE-LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC 473
           L  C +  + L  V EF+  G L  H+ K         R+  A ++ S L++L +   + 
Sbjct: 61  LYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEITSALMFLHD---KG 116

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASK 533
           +++RD+K  N++LD   + K+ DFG+ +      G  T+   GT  Y+APE         
Sbjct: 117 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF-NGKTTSTFCGTPDYIAPEILQEMLYGP 175

Query: 534 ESDVYSFGIVALEIACGRKP 553
             D ++ G++  E+ CG  P
Sbjct: 176 SVDWWAMGVLLYEMLCGHAP 195

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 69.8 bits (171), Expect = 3e-13
 Identities = 73/286 (25%), Positives = 123/286 (43%), Gaps = 46/286 (16%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQ--------GSKQGIKEYASE-VKIISRLRH 408
           + LGQG F  +YKG  R  +    V    +        GS         E   ++S+L H
Sbjct: 1   EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSH 60

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
           ++LV+L G C  + E ++V E++  G LD  L +E + ++  ++  +A+ LAS L YL++
Sbjct: 61  KHLVKLYGVC-VRDENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLED 119

Query: 469 EWEQCVVHRDIKSSNIML---DSNFN----AKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
             ++  VH ++   NI++     N       K+ D G+   V   +     +      ++
Sbjct: 120 --KKL-VHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERI-----PWI 171

Query: 522 APECATTGKASKES--DVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKL 578
           APEC   G+AS     D +SFG   LEI   G +P++  +   +          Y +   
Sbjct: 172 APECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE-------RFYQDQHR 224

Query: 579 LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           L           D  ++  L+     C   D   RPS R ++  LN
Sbjct: 225 LPMP--------DCAELANLINQ---CWTYDPTKRPSFRAILRDLN 259

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 70.7 bits (173), Expect = 3e-13
 Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 13/202 (6%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRN--LVQL 414
           LG+G FG V     +    Y AVK + +        ++    E ++++ L   N  L  L
Sbjct: 3   LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLA-LAWENPFLTHL 61

Query: 415 LGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCV 474
                 K+ L  V EF+  G L  H+  +     +   +  A ++  GL +L  +    +
Sbjct: 62  YCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATF-YAAEIVCGLQFLHSKG---I 117

Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASK 533
           ++RD+K  N+MLD + + KI DFG+ +  E+  G ++ +   GT  Y+APE     K + 
Sbjct: 118 IYRDLKLDNVMLDRDGHIKIADFGMCK--ENVFGDNRASTFCGTPDYIAPEILQGLKYTF 175

Query: 534 ESDVYSFGIVALEIACGRKPIN 555
             D +SFG++  E+  G+ P +
Sbjct: 176 SVDWWSFGVLLYEMLIGQSPFH 197

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 69.9 bits (172), Expect = 4e-13
 Identities = 54/192 (28%), Positives = 100/192 (52%), Gaps = 18/192 (9%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIK-EYASEVKIISRLRHRNLVQL-- 414
           ++ +G +G VY+   ++T   +A+K++  +  K+G       E+ I+ +L+H N+V +  
Sbjct: 12  RIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKE 71

Query: 415 --LGWCHEKKELLLVYEFMPNG--SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
             +G   +K  + +V E++ +   SL      +   L  E +  + Q L SG+ +L + W
Sbjct: 72  VVVGSNLDK--IYMVMEYVEHDLKSLMET--MKQPFLQSEVKCLMLQ-LLSGVAHLHDNW 126

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT-TG 529
              ++HRD+K+SN++L++    KI DFGLAR         T ++  T+ Y APE      
Sbjct: 127 ---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVV-TLWYRAPELLLGAK 182

Query: 530 KASKESDVYSFG 541
           + S   D++S G
Sbjct: 183 EYSTAIDMWSVG 194

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 69.6 bits (170), Expect = 4e-13
 Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 16/202 (7%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVK-------RVSQGSKQGIKEYASEVKIISRLRHRNLV 412
           +G+GGFG VY     +T    A+K       ++ QG    + E    + ++S      +V
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM-LSLVSTGDCPFIV 60

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
            +    H   +L  + + M  G L  HL +       E R+  A ++  GL ++   +  
Sbjct: 61  CMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRF-YATEIILGLEHMHNRF-- 117

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKAS 532
            VV+RD+K +NI+LD + + +I D GLA      K   +    GT GYMAPE    G A 
Sbjct: 118 -VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGTAY 173

Query: 533 KES-DVYSFGIVALEIACGRKP 553
             S D +S G +  ++  G  P
Sbjct: 174 DSSADWFSLGCMLFKLLRGHSP 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 70.2 bits (172), Expect = 5e-13
 Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 37/235 (15%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS-------EVKIISRLRHRNLV 412
           +G+G +G V       T   +A+K++       + E+ S       E+K++  LRH ++V
Sbjct: 8   IGKGSYGVVCSAIDTHTGEKVAIKKI-----NDVFEHVSDATRILREIKLLRLLRHPDIV 62

Query: 413 QLLGWCH--------EKKELLLVYEFMPNGSLDSH-LFKENSLLTWEFRYKIAQDLASGL 463
           ++    H        E K++ +V+E M +   D H + K N  LT E        L   L
Sbjct: 63  EIK---HIMLPPSRREFKDIYVVFELMES---DLHQVIKANDDLTPEHHQFFLYQLLRAL 116

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT--TVLAGTMGYM 521
            Y+       V HRD+K  NI+ +++   KI DFGLAR+  +   +    T    T  Y 
Sbjct: 117 KYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 173

Query: 522 APE-CAT-TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG 574
           APE C +   K +   D++S G +  E+  G KP+ P   +  V  L  + DL G
Sbjct: 174 APELCGSFFSKYTPAIDIWSIGCIFAEVLTG-KPLFPG--KNVVHQLDLITDLLG 225

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 69.8 bits (171), Expect = 5e-13
 Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 12/204 (5%)

Query: 360 LGQGGFGGVY---KGFFRETNSYIAVKRVSQGSKQGIKEYAS--EVKIISRLRHRNLVQL 414
           LGQG FG V+   K    +     A+K + + + +      +  E  I++ + H  +V+L
Sbjct: 4   LGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKL 63

Query: 415 LGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCV 474
                 + +L L+ +F+  G L + L KE      + ++ +A+ LA  L +L       +
Sbjct: 64  HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE-LALALDHLHS---LGI 119

Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLAR-LVEHAKGSQTTVLAGTMGYMAPECATTGKASK 533
           ++RD+K  NI+LD   + K+ DFGL++  ++H K  +     GT+ YMAPE       ++
Sbjct: 120 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQ 177

Query: 534 ESDVYSFGIVALEIACGRKPINPK 557
            +D +SFG++  E+  G  P   K
Sbjct: 178 SADWWSFGVLMFEMLTGSLPFQGK 201

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 70.0 bits (171), Expect = 6e-13
 Identities = 73/293 (24%), Positives = 135/293 (46%), Gaps = 45/293 (15%)

Query: 358 QKLGQGGFGGVYK----GFFRETNS---YIAVKRVSQ-GSKQGIKEYASEVKIISRL-RH 408
           + LG+G FG V      G  ++  +    +AVK +    + + + +  SE++++  + +H
Sbjct: 18  KPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKH 77

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKE---------------NSLLTWEFRY 453
           +N++ LLG C +   L ++ E+   G+L  +L                     LT++   
Sbjct: 78  KNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLV 137

Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK-GSQTT 512
             A  +A G+ YL  +  +C+ HRD+ + N+++  +   KI DFGLAR V +     +TT
Sbjct: 138 SCAYQVARGMEYLASQ--KCI-HRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTT 194

Query: 513 VLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWD 571
                + +MAPE       + +SDV+SFG++  EI   G  P  P  P      ++ ++ 
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPY-PGIP------VEELFK 247

Query: 572 LYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           L   G  ++   P  C          L ++   C H   + RP+ +Q++  L+
Sbjct: 248 LLKEGHRMD--KPANC-------THELYMIMRECWHAVPSQRPTFKQLVEDLD 291

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 69.2 bits (170), Expect = 7e-13
 Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 26/201 (12%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQ--GSKQGIKEYASEVKIISRLR-HRNLVQLL 415
           K+G+G F  V K   R+T  Y A+K + +   S + +     E++ + RL  H N+++L+
Sbjct: 6   KIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNL-REIQALRRLSPHPNILRLI 64

Query: 416 GWCHEKKE--LLLVYEFMPNGSL------DSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
               ++K   L LV+E M + +L            E  + ++ ++      L   L ++ 
Sbjct: 65  EVLFDRKTGRLALVFELM-DMNLYELIKGRKRPLPEKRVKSYMYQ------LLKSLDHMH 117

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECA- 526
                 + HRDIK  NI++  +   K+ DFG  R + ++K   T  ++ T  Y APEC  
Sbjct: 118 R---NGIFHRDIKPENILIKDD-ILKLADFGSCRGI-YSKPPYTEYIS-TRWYRAPECLL 171

Query: 527 TTGKASKESDVYSFGIVALEI 547
           T G    + D+++ G V  EI
Sbjct: 172 TDGYYGPKMDIWAVGCVFFEI 192

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 68.9 bits (168), Expect = 1e-12
 Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 25/213 (11%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL------ 406
           DFN    LG+G FG V     + T+   A+K + +     I++   E  ++ +       
Sbjct: 1   DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV--IQDDDVECTMVEKRVLALSG 58

Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLAS 461
           +   L QL         L  V E++  G L   +     FKE   + +      A ++A 
Sbjct: 59  KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFY------AAEIAI 112

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA-KGSQTTVLAGTMGY 520
           GL +L     + +++RD+K  N+MLDS  + KI DFG+ +  E+   G  T    GT  Y
Sbjct: 113 GLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENMWDGVTTKTFCGTPDY 167

Query: 521 MAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +APE        K  D ++FG++  E+  G+ P
Sbjct: 168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 200

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 68.6 bits (168), Expect = 1e-12
 Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLVQLLGW 417
           KLG+G +  VYKG  + T   +A+K +    ++G    A  E  ++  L+H N+V L   
Sbjct: 12  KLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDI 71

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWE----FRYKIAQDLASGLLYLQEEWEQC 473
            H KK L LV+E++ +  L  ++      L+      F ++    L  GL Y  +   + 
Sbjct: 72  IHTKKTLTLVFEYL-DTDLKQYMDDCGGGLSMHNVRLFLFQ----LLRGLAYCHQ---RR 123

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLAR 501
           V+HRD+K  N+++      K+ DFGLAR
Sbjct: 124 VLHRDLKPQNLLISERGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 69.2 bits (170), Expect = 1e-12
 Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 37/234 (15%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG----SKQGIKEYASEVKIISRLR 407
           +DF   + +G+G FG V+    ++T    A+K + +       Q I    +E  I++   
Sbjct: 1   DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQ-IAHVRAERDILADAD 59

Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
              +V+L     +++ L LV E+MP G L + L +++       R+ IA+     +L L 
Sbjct: 60  SPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAE----LVLALD 115

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA------------------------RLV 503
              +   +HRDIK  NI++D++ + K+ DFGL                          LV
Sbjct: 116 SVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLV 175

Query: 504 EHAKGSQTTVLA----GTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
                 Q  V A    GT  Y+APE         E D +S G++  E+  G  P
Sbjct: 176 RRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPP 229

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 69.5 bits (170), Expect = 1e-12
 Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 13/182 (7%)

Query: 375 ETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNG 434
           E    + VK V+ G   G      E+ I+  + HR ++ L+   H  +    V   MP  
Sbjct: 117 EQRKKVIVKAVTGGKTPG-----REIDILKTISHRAIINLI---HAYRWKSTVCMVMPKY 168

Query: 435 SLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
             D   + + +  L  E    I + L   L YL     + ++HRD+K+ NI LD   NA 
Sbjct: 169 KCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAV 225

Query: 494 IGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRK 552
           +GDFG A +L  H    Q    +GT+   +PE         ++D++S G+V  E++    
Sbjct: 226 LGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNV 285

Query: 553 PI 554
            +
Sbjct: 286 TL 287

Length = 392

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 70.6 bits (173), Expect = 2e-12
 Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 19/191 (9%)

Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLL--GWCHEKKELLLVYE 429
            T   +A+K +   + +   + A    E  + +RL H N+V LL  G       L  V+E
Sbjct: 1   MTGHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEA-PPGLLFAVFE 59

Query: 430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML--- 486
           ++P  +L   L  + +L   E    + Q L +    L     Q +VHRD+K  NIM+   
Sbjct: 60  YVPGRTLREVLAADGALPAGETGRLMLQVLDA----LACAHNQGIVHRDLKPQNIMVSQT 115

Query: 487 DSNFNAKIGDFGLARL------VEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
               +AK+ DFG+  L       + A  ++TT + GT  Y APE       +  SD+Y++
Sbjct: 116 GVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAW 175

Query: 541 GIVALEIACGR 551
           G++ LE   G+
Sbjct: 176 GLIFLECLTGQ 186

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 68.7 bits (168), Expect = 2e-12
 Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 21/211 (9%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRL-RH 408
           DFN    LG+G FG V     + T+   A+K + +        ++    E ++++   + 
Sbjct: 1   DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKP 60

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLASGL 463
             L QL         L  V E++  G L  H+     FKE   + +      A ++A GL
Sbjct: 61  PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFY------AAEIAIGL 114

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT-VLAGTMGYMA 522
            +L     + +++RD+K  N+MLD+  + KI DFG+ +  E+  G +TT    GT  Y+A
Sbjct: 115 FFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCK--ENIFGGKTTRTFCGTPDYIA 169

Query: 523 PECATTGKASKESDVYSFGIVALEIACGRKP 553
           PE        K  D ++FG++  E+  G+ P
Sbjct: 170 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQPP 200

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 21/213 (9%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHR 409
           DFN    LG+G FG V     + T+   A+K + +        ++    E ++++     
Sbjct: 1   DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKP 60

Query: 410 NLVQLLGWCHEKKE-LLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLASGL 463
             +  L  C +  + L  V E++  G L  H+     FKE   + +      A +++ GL
Sbjct: 61  PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFY------AAEISVGL 114

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH-AKGSQTTVLAGTMGYMA 522
            +L     + +++RD+K  N+MLDS  + KI DFG+ +  EH   G  T    GT  Y+A
Sbjct: 115 FFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMVDGVTTRTFCGTPDYIA 169

Query: 523 PECATTGKASKESDVYSFGIVALEIACGRKPIN 555
           PE        K  D +++G++  E+  G+ P +
Sbjct: 170 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 202

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 68.2 bits (166), Expect = 3e-12
 Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 41/245 (16%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHR 409
           DF   + +G+G FG V     ++T    A+K + +     K+ +    +E  I+      
Sbjct: 2   DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSL 61

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
            +V++     +K  L L+ EF+P G + + L K+++L   E ++ IA+ +    L +   
Sbjct: 62  WVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETV----LAIDSI 117

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA------------RLVEHAKGSQTTV---- 513
            +   +HRDIK  N++LDS  + K+ DFGL             R + H+  S  T     
Sbjct: 118 HQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMN 177

Query: 514 ------------------LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPIN 555
                               GT  Y+APE       +K  D +S G++  E+  G  P  
Sbjct: 178 SKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237

Query: 556 PKAPQ 560
            + PQ
Sbjct: 238 SETPQ 242

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 67.3 bits (164), Expect = 4e-12
 Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 21/209 (10%)

Query: 359 KLGQGGFGGVYKGF-FRETNSYIAVKRVS-QGSKQGIK-EYASEVKIISRLR---HRNLV 412
           ++G+G +G V+K    +    ++A+KRV  Q  ++G+      EV ++  L    H N+V
Sbjct: 8   EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 67

Query: 413 QLLGWC-----HEKKELLLVYEFMPNGSLDSHLFK--ENSLLTWEFRYKIAQDLASGLLY 465
           +L   C       + +L LV+E + +  L ++L K  E  + T   +  + Q L  GL +
Sbjct: 68  RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQ-LLRGLDF 125

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           L       VVHRD+K  NI++ S+   K+ DFGLAR+  ++     T +  T+ Y APE 
Sbjct: 126 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI--YSFQMALTSVVVTLWYRAPEV 180

Query: 526 ATTGKASKESDVYSFGIVALEIACGRKPI 554
                 +   D++S G +  E+   RKP+
Sbjct: 181 LLQSSYATPVDLWSVGCIFAEMF-RRKPL 208

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 67.3 bits (164), Expect = 4e-12
 Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 11/199 (5%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISR-LRHRNLVQLL 415
           +G+G FG V     +    + AVK + + +   K+  K   SE  ++ + ++H  LV L 
Sbjct: 3   IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 62

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
                  +L  V +++  G L  HL +E   L    R+  A ++AS L YL       +V
Sbjct: 63  FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLHS---LNIV 118

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARL-VEHAKGSQTTVLAGTMGYMAPECATTGKASKE 534
           +RD+K  NI+LDS  +  + DFGL +  +EH     T+   GT  Y+APE        + 
Sbjct: 119 YRDLKPENILLDSQGHIVLTDFGLCKENIEH--NGTTSTFCGTPEYLAPEVLHKQPYDRT 176

Query: 535 SDVYSFGIVALEIACGRKP 553
            D +  G V  E+  G  P
Sbjct: 177 VDWWCLGAVLYEMLYGLPP 195

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 67.0 bits (164), Expect = 5e-12
 Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 19/210 (9%)

Query: 358 QKLGQGGFGGVYKGFFRETN--SYIAVKRVSQ--GSKQGIKEYASEVKIISRLR-HRNLV 412
           ++LGQG +G V      ET+    +A+K+++     K   K    E+K++   R H+N+ 
Sbjct: 6   KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNIT 65

Query: 413 QLLG----WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
            L      +     EL L  E M    L   +     L    F+  I Q L  GL Y+  
Sbjct: 66  CLYDMDIVFPGNFNELYLYEELM-EADLHQIIRSGQPLTDAHFQSFIYQILC-GLKYIHS 123

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG---TMGYMAPEC 525
                V+HRD+K  N++++++   KI DFGLAR      G     +     T  Y APE 
Sbjct: 124 ---ANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEI 180

Query: 526 ATTGKA-SKESDVYSFGIVALEIACGRKPI 554
             + ++ +K  DV+S G +  E+  GRKP+
Sbjct: 181 MLSFQSYTKAIDVWSVGCILAEL-LGRKPV 209

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 66.5 bits (162), Expect = 6e-12
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 26/207 (12%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLL--GW 417
           +G+GGFG VY     +T    A+K +    K+ IK    E      L  R ++ L+  G 
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLD---KKRIKMKQGETLA---LNERIMLSLVSTGD 55

Query: 418 C----------HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
           C          H   +L  + + M  G L  HL +       E R+  A ++  GL ++ 
Sbjct: 56  CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRF-YAAEIILGLEHMH 114

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT 527
             +   VV+RD+K +NI+LD + + +I D GLA      K   +    GT GYMAPE   
Sbjct: 115 NRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQ 168

Query: 528 TGKASKES-DVYSFGIVALEIACGRKP 553
            G A   S D +S G +  ++  G  P
Sbjct: 169 KGVAYDSSADWFSLGCMLFKLLRGHSP 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 66.5 bits (162), Expect = 7e-12
 Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 9/198 (4%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKE----YASEVKIISRLRHRNLVQLL 415
           +G+G FG V     +   S+ AVK + + +    KE     A    ++  L+H  LV L 
Sbjct: 3   IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLH 62

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
                 ++L  V +++  G L  HL +E   L    R+  A ++AS + YL       ++
Sbjct: 63  YSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARF-YAAEVASAIGYLHS---LNII 118

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES 535
           +RD+K  NI+LDS  +  + DFGL +     + + T+   GT  Y+APE        +  
Sbjct: 119 YRDLKPENILLDSQGHVVLTDFGLCKEGVEPEET-TSTFCGTPEYLAPEVLRKEPYDRTV 177

Query: 536 DVYSFGIVALEIACGRKP 553
           D +  G V  E+  G  P
Sbjct: 178 DWWCLGAVLYEMLYGLPP 195

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 67.7 bits (165), Expect = 7e-12
 Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 40/239 (16%)

Query: 396 YA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---FKENSLLTWEF 451
           YA SE+  ++   H  +V+         +LLL+ E+   G L+  +    KE+       
Sbjct: 111 YARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPF---- 166

Query: 452 RYKIAQDLASGLLYLQ------EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR-LVE 504
                Q+   GLL+ Q      E   + ++HRD+KS+NI L      K+GDFG ++   +
Sbjct: 167 -----QEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD 221

Query: 505 HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVS 564
                  +   GT  Y+APE     + SK++D++S G++  E+    +P   K P  Q  
Sbjct: 222 SVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPF--KGPS-QRE 278

Query: 565 LLQWVWDLYGNGKLLEAVDPRLCRDFDGQQ--IERLMIVGLWCAHPDENLRPSIRQVIH 621
           ++Q V  LYG        DP  C    G +  ++ L+         +  LRP+ +Q++H
Sbjct: 279 IMQQV--LYGK------YDPFPCPVSSGMKALLDPLL-------SKNPALRPTTQQLLH 322

Length = 478

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 66.0 bits (161), Expect = 8e-12
 Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 14/204 (6%)

Query: 360 LGQGGFGGVY---KGFFRETNSYIAVKRVSQGS---KQGIKEYA-SEVKIISRLRHRNLV 412
           LG G +G V+   K    +     A+K + + +   K    E+  +E +++  +R    +
Sbjct: 8   LGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFL 67

Query: 413 QLLGWCHE-KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
             L +  +   +L L+ +++  G L +HL++       E R  IA+ +    L L    +
Sbjct: 68  VTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIV----LALDHLHQ 123

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA 531
             +++RDIK  NI+LDS  +  + DFGL++     +  +     GT+ YMAPE    G  
Sbjct: 124 LGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSG 183

Query: 532 --SKESDVYSFGIVALEIACGRKP 553
              K  D +S G++  E+  G  P
Sbjct: 184 GHDKAVDWWSLGVLTFELLTGASP 207

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 66.6 bits (162), Expect = 1e-11
 Identities = 58/246 (23%), Positives = 106/246 (43%), Gaps = 41/246 (16%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRH 408
           +DF   + +G+G FG V     ++T    A+K + +     K+ +    +E  I+     
Sbjct: 1   DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG 60

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
             +V++     +K+ L L+ EF+P G + + L K+++L     ++ IA+ +    L +  
Sbjct: 61  AWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETV----LAIDA 116

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA---------------------------- 500
             +   +HRDIK  N++LD+  + K+ DFGL                             
Sbjct: 117 IHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNM 176

Query: 501 ---RLVEHAKGSQTTVLAGTMG---YMAPECATTGKASKESDVYSFGIVALEIACGRKPI 554
              R  E  K ++  +   T+G   Y+APE       +K  D +S G++  E+  G  P 
Sbjct: 177 NSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236

Query: 555 NPKAPQ 560
             + PQ
Sbjct: 237 CSETPQ 242

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 65.8 bits (161), Expect = 1e-11
 Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 33/167 (19%)

Query: 359 KLGQGGFGGVYKGFFRE--TNSYIAVKRVSQGSKQ--GIKEYA-SEVKIISRLRHRNLVQ 413
            +G+G +G VYK   +        A+K+     +Q  GI + A  E+ ++  L+H N+V 
Sbjct: 7   CIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVS 66

Query: 414 LLGWC--HEKKELLLVYEFMPNGSL---------DSHLFKENSL--LTWEFRYKIAQDLA 460
           L+     H  K + L++++  +                   + +  L W+        + 
Sbjct: 67  LVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQ--------IL 118

Query: 461 SGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA----KIGDFGLARLV 503
           +G+ YL   W   V+HRD+K +NI++          KIGD GLARL 
Sbjct: 119 NGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDLGLARLF 162

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 65.4 bits (160), Expect = 2e-11
 Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 30/212 (14%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVS--QGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
                   + K   + TN+ +AVK+++    SK+ +K    E+    +L+H N++  +  
Sbjct: 10  FEDLMIVHLAK--HKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTS 67

Query: 418 CHEKKELLLVYEFMPNGS----LDSHL---FKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
                EL +V   M  GS    L +H      E ++      + I +D+ + L Y+  + 
Sbjct: 68  FIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAI-----AF-ILKDVLNALDYIHSK- 120

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR-LVEHAKGSQTTVLAGT-----MGYMAPE 524
              + HR +K+S+I+L  +    +     +  +++H K  +            + +++PE
Sbjct: 121 -GFI-HRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPE 178

Query: 525 C---ATTGKASKESDVYSFGIVALEIACGRKP 553
                  G   K SD+YS GI A E+A G  P
Sbjct: 179 VLQQNLQGYNEK-SDIYSVGITACELANGHVP 209

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 64.6 bits (157), Expect = 2e-11
 Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 27/215 (12%)

Query: 360 LGQGGFGGVYKGFFR-ETNSY--IAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQL 414
           LG+G FG V +   + E  S+  +AVK  +    S   I+E+  E   +    H N+++L
Sbjct: 7   LGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKL 66

Query: 415 LGWC---HEKKEL---LLVYEFMPNGSLDSHLFK----ENSL-LTWEFRYKIAQDLASGL 463
           +G       K  L   +++  FM +G L + L      E    L  +   +   D+ASG+
Sbjct: 67  IGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGM 126

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMG 519
            YL     +  +HRD+ + N ML+ N    + DFGL++ +     + +G  + +    + 
Sbjct: 127 EYLSS---KNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKL---PVK 180

Query: 520 YMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           ++A E       +  SDV++FG+   EI   G+ P
Sbjct: 181 WLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTP 215

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 64.3 bits (156), Expect = 4e-11
 Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 17/151 (11%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLVQLLG 416
           +KLG+G +  VYKG  +     +A+K +    ++G    A  E  ++  L+H N+V L  
Sbjct: 11  EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHD 70

Query: 417 WCHEKKELLLVYEFMPNG---SLDSH---LFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
             H K+ L LV+E++       +D H   L  EN  L   F ++    L  GL Y+ + +
Sbjct: 71  IIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKL---FLFQ----LLRGLSYIHQRY 123

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR 501
              ++HRD+K  N+++      K+ DFGLAR
Sbjct: 124 ---ILHRDLKPQNLLISDTGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 64.7 bits (158), Expect = 4e-11
 Identities = 64/250 (25%), Positives = 111/250 (44%), Gaps = 46/250 (18%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVK----IISRLR 407
           +DF   + +G+G FG V     ++T    A+K++ + S+   KE  + V+    I++   
Sbjct: 1   DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRK-SEMLEKEQVAHVRAERDILAEAD 59

Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
           +  +V+L     ++  L L+ E++P G + + L K+++    E R+ IA+ +    L + 
Sbjct: 60  NPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETI----LAID 115

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL------------ARLVEHAKGSQTT--- 512
              +   +HRDIK  N++LD+  + K+ DFGL             R++ HA  S      
Sbjct: 116 SIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFI 175

Query: 513 ------------------VLA----GTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
                              LA    GT  Y+APE       +KE D +S G++  E+  G
Sbjct: 176 SKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235

Query: 551 RKPINPKAPQ 560
             P     PQ
Sbjct: 236 YPPFCSDNPQ 245

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 63.5 bits (154), Expect = 7e-11
 Identities = 58/198 (29%), Positives = 87/198 (43%), Gaps = 9/198 (4%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVK----RVSQGSKQGIKEYASEVKIISRLRHRNLVQLL 415
           +G+G FG V     +      AVK    ++    K+     A    ++  ++H  LV L 
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLH 62

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
                 ++L  V +F+  G L  HL +E S      R+  A+ +AS L YL       +V
Sbjct: 63  YSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAE-IASALGYLHS---INIV 118

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES 535
           +RD+K  NI+LDS  +  + DFGL +    A+   TT   GT  Y+APE           
Sbjct: 119 YRDLKPENILLDSQGHVVLTDFGLCK-EGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTV 177

Query: 536 DVYSFGIVALEIACGRKP 553
           D +  G V  E+  G  P
Sbjct: 178 DWWCLGAVLYEMLYGLPP 195

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 63.5 bits (154), Expect = 8e-11
 Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 19/201 (9%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLG- 416
           +G G +G V   F  +T   +AVK++S+  +  I  K    E++++  ++H N++ LL  
Sbjct: 25  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 84

Query: 417 -----WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
                   E  ++ LV   M  G+  +++ K   L     ++ I Q L  GL Y+     
Sbjct: 85  FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS--- 138

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA 531
             ++HRD+K SN+ ++ +   KI DFGLAR   H     T  +A T  Y APE       
Sbjct: 139 ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMH 194

Query: 532 SKES-DVYSFGIVALEIACGR 551
             ++ D++S G +  E+  GR
Sbjct: 195 YNQTVDIWSVGCIMAELLTGR 215

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 63.4 bits (154), Expect = 9e-11
 Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 16/224 (7%)

Query: 353 DFNDDQKLGQGGFGGVY---KGFFRETNSYIAVKRVSQGS---KQGIKEYA-SEVKIISR 405
           +F   + LG G +G V+   K    +T    A+K + + +   K    E+  +E  ++  
Sbjct: 1   NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEH 60

Query: 406 LRHRNLVQLLGWCHEKK-ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLL 464
           +R    +  L +  + + +L L+ +++  G + +HL++ ++    E R+   + +    L
Sbjct: 61  VRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEII----L 116

Query: 465 YLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE 524
            L+   +  +V+RDIK  NI+LDS  +  + DFGL++     +  +T    GT+ YMAPE
Sbjct: 117 ALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPE 176

Query: 525 CA-TTGKASKESDVYSFGIVALEIACGRKPIN---PKAPQGQVS 564
                G   K  D +S GI+  E+  G  P      +  Q +VS
Sbjct: 177 IIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVS 220

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 62.7 bits (152), Expect = 1e-10
 Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 19/211 (9%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLG 416
           + +G+G +G V+K   ++  S  AVK +        +E  +E  I+  L  H N+V+  G
Sbjct: 24  ETIGKGTYGKVFKVLNKKNGSKAAVK-ILDPIHDIDEEIEAEYNILKALSDHPNVVKFYG 82

Query: 417 WCHEKK-----ELLLVYEFMPNGS---LDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
             ++K      +L LV E    GS   L     K    +       IA  L   L+ LQ 
Sbjct: 83  MYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPI---IAYILHEALMGLQH 139

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE---C 525
                 +HRD+K +NI+L +    K+ DFG++  +   +  + T + GT  +MAPE   C
Sbjct: 140 LHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSV-GTPFWMAPEVIAC 198

Query: 526 ATTGKASKES--DVYSFGIVALEIACGRKPI 554
                ++ ++  DV+S GI A+E+  G  P+
Sbjct: 199 EQQLDSTYDARCDVWSLGITAIELGDGDPPL 229

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 63.3 bits (154), Expect = 1e-10
 Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 26/223 (11%)

Query: 345 KELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS-----E 399
            +L +   DF+  + +G+G FG V     + +    A+K +S+   + IK   S     E
Sbjct: 36  TKLRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSK--FEMIKRSDSAFFWEE 93

Query: 400 VKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD- 458
             I++      +VQL     + K L +V E+MP G L        +L++    Y I +  
Sbjct: 94  RDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDL-------VNLMS---NYDIPEKW 143

Query: 459 ----LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
                A  +L L        +HRD+K  N++LD + + K+ DFG    ++     +    
Sbjct: 144 ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTA 203

Query: 515 AGTMGYMAPEC----ATTGKASKESDVYSFGIVALEIACGRKP 553
            GT  Y++PE        G   +E D +S G+   E+  G  P
Sbjct: 204 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 246

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 62.4 bits (151), Expect = 2e-10
 Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 11/201 (5%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQ---GSKQGIKEYASEVKIISRL-RHRNLVQLL 415
           +G+G +  V     ++T    A+K V +      + I    +E  +  +   H  LV L 
Sbjct: 3   IGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 62

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
                +  L  V E++  G L  H+ ++  L     R+  A+ ++  L YL E   + ++
Sbjct: 63  SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE-ISLALNYLHE---RGII 118

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKE 534
           +RD+K  N++LDS  + K+ D+G+ +  E  + G  T+   GT  Y+APE          
Sbjct: 119 YRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFS 176

Query: 535 SDVYSFGIVALEIACGRKPIN 555
            D ++ G++  E+  GR P +
Sbjct: 177 VDWWALGVLMFEMMAGRSPFD 197

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 62.3 bits (151), Expect = 3e-10
 Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 12/216 (5%)

Query: 345 KELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA---SEVK 401
           ++L +   D++  + +G+G FG V     + +    A+K +S+       + A    E  
Sbjct: 36  RKLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERD 95

Query: 402 IISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS 461
           I++      +VQL     + K L +V E+MP G L + +   +    W   Y      A 
Sbjct: 96  IMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYT-----AE 150

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
            +L L       ++HRD+K  N++LD + + K+ DFG    ++     +     GT  Y+
Sbjct: 151 VVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYI 210

Query: 522 APECATT----GKASKESDVYSFGIVALEIACGRKP 553
           +PE   +    G   +E D +S G+   E+  G  P
Sbjct: 211 SPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 246

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 60.7 bits (147), Expect = 4e-10
 Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 44/224 (19%)

Query: 358 QKLGQGGFG-----------GVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL 406
           Q++G G FG           GV +   +E  +  + K  ++  +QG             L
Sbjct: 1   QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRI--------L 52

Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFR-------YKIAQDL 459
           +H N++Q LG C E    LLV+E+   G L S+L +E     W  R        ++A ++
Sbjct: 53  QHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQ----WHRRNSQLLLLQRMACEI 108

Query: 460 ASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL--ARLVEHAKGSQTTVLAGT 517
           A+G+ ++    +   +H D+   N  L S+   K+GD+G+  +R  E    ++       
Sbjct: 109 AAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCV-P 164

Query: 518 MGYMAPECAT-------TGKASKESDVYSFGIVALEI-ACGRKP 553
           + ++APE          T + +K S+V++ G+   E+     +P
Sbjct: 165 LRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQP 208

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 60.8 bits (147), Expect = 5e-10
 Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 24/209 (11%)

Query: 360 LGQGGFGGVY---KGFFRETNSYIAVKRVSQGS---KQGIKEYA-SEVKIISRLRHRNLV 412
           LG G +G V+   K    ++    A+K + + +   K    E+  +E +++  +R    +
Sbjct: 8   LGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 67

Query: 413 QLLGWCHEKK-ELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLASGLLYL 466
             L +  +   +L L+ +++  G L +HL     FKE  +  +             +L L
Sbjct: 68  VTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIY---------SGEIVLAL 118

Query: 467 QEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECA 526
           +   +  +++RDIK  NI+LDSN +  + DFGL++     +  +     GT+ YMAP+  
Sbjct: 119 EHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIV 178

Query: 527 TTGKA--SKESDVYSFGIVALEIACGRKP 553
             G     K  D +S G++  E+  G  P
Sbjct: 179 RGGDGGHDKAVDWWSMGVLMYELLTGASP 207

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 60.0 bits (145), Expect = 7e-10
 Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 20/172 (11%)

Query: 395 EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK 454
           E AS ++ +S   H+++V L G C    E ++V EF+  G LD  + +++ +LT  +++K
Sbjct: 53  ETASMMRQVS---HKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFK 109

Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNFNAKIGDFGLARLVEHAKGSQTTV 513
           +A+ LAS L YL+   ++ +VH ++ + NI+L     + + G F   +L +   G   TV
Sbjct: 110 VAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPF--IKLSD--PGIPITV 162

Query: 514 LA-----GTMGYMAPECATTGKA-SKESDVYSFGIVALEIAC--GRKPINPK 557
           L+       + ++APEC    K  S  +D +SFG    EI C  G  P+  K
Sbjct: 163 LSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEI-CYNGEIPLKDK 213

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 60.2 bits (146), Expect = 1e-09
 Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 34/225 (15%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRV--------SQGSKQGIKEYA------SEVKIISR 405
           LG+G +G V K +   T   +A+K+V            +Q +           E+KI++ 
Sbjct: 17  LGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE 76

Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
           ++H N++ L+    E   + LV + M    L   +      LT      I   + +GL  
Sbjct: 77  IKHENIMGLVDVYVEGDFINLVMDIM-ASDL-KKVVDRKIRLTESQVKCILLQILNGLNV 134

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR-------------LVEHAKGSQTT 512
           L + +    +HRD+  +NI ++S    KI DFGLAR                  +  + T
Sbjct: 135 LHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMT 191

Query: 513 VLAGTMGYMAPECAT-TGKASKESDVYSFGIVALEIACGRKPINP 556
               T+ Y APE      K     D++S G +  E+  G KP+ P
Sbjct: 192 SKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTG-KPLFP 235

Length = 335

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 59.9 bits (145), Expect = 1e-09
 Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 9/198 (4%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLR-HRNLVQLL 415
           LG+G FG V     + T+   A+K + +        +    +E +I++    H  L  L 
Sbjct: 3   LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALH 62

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
                K  L  V E++  G L   + +         R+  A ++   L++L       V+
Sbjct: 63  CCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRF-YAAEVTLALMFLHR---HGVI 118

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES 535
           +RD+K  NI+LD+  + K+ DFG+ +      G  TT   GT  Y+APE     +     
Sbjct: 119 YRDLKLDNILLDAEGHCKLADFGMCK-EGILNGVTTTTFCGTPDYIAPEILQELEYGPSV 177

Query: 536 DVYSFGIVALEIACGRKP 553
           D ++ G++  E+  G+ P
Sbjct: 178 DWWALGVLMYEMMAGQPP 195

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 60.6 bits (147), Expect = 2e-09
 Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 49/223 (21%)

Query: 359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQ---GSKQGIKEYASEVKIISRLRHRNLVQLL 415
            +G+GG G VY  +    +  +A+K++ +    +    K +  E KI + L H  +V + 
Sbjct: 9   LIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVY 68

Query: 416 GWCHEKKELLLVYEFMP--NGSLDSHLFKENSLLTWEFRYKIAQDLA------------- 460
             C +      VY  MP   G     L K      W+ +  ++++LA             
Sbjct: 69  SICSDGD---PVYYTMPYIEGYTLKSLLKS----VWQ-KESLSKELAEKTSVGAFLSIFH 120

Query: 461 ---SGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV---- 513
              + + Y+     + V+HRD+K  NI+L       I D+G A   +  +     +    
Sbjct: 121 KICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDE 177

Query: 514 -------------LAGTMGYMAPECATTGKASKESDVYSFGIV 543
                        + GT  YMAPE      AS+ +D+Y+ G++
Sbjct: 178 RNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVI 220

Length = 932

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 59.2 bits (143), Expect = 2e-09
 Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 19/207 (9%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNL 411
           + D +++G G +G V     R T + +A+K++ +   S+   K    E++++  ++H N+
Sbjct: 17  YRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENV 76

Query: 412 VQLLGWCHEKKEL------LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
           + LL        L       LV  FM  G+    L K   L     ++ + Q L  GL Y
Sbjct: 77  IGLLDVFTPDLSLDRFHDFYLVMPFM--GTDLGKLMKHEKLSEDRIQFLVYQML-KGLKY 133

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           +       ++HRD+K  N+ ++ +   KI DFGLAR  +    S+ T    T  Y APE 
Sbjct: 134 IHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQTD----SEMTGYVVTRWYRAPEV 186

Query: 526 ATTG-KASKESDVYSFGIVALEIACGR 551
                  ++  D++S G +  E+  G+
Sbjct: 187 ILNWMHYTQTVDIWSVGCIMAEMLTGK 213

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 59.8 bits (144), Expect = 3e-09
 Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 38/237 (16%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS-----EVKIISRL 406
           N++   +K+G G FG V+    + T  +   K +S    +G+KE        EV ++  L
Sbjct: 13  NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISY---RGLKEREKSQLVIEVNVMREL 69

Query: 407 RHRNLVQLLGWCHEK--KELLLVYEFMPNGSLDSHL---FKENSLLTWEFRYKIAQDLAS 461
           +H+N+V+ +     K  ++L ++ EF   G L  ++   +K    +       I + L  
Sbjct: 70  KHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLH 129

Query: 462 GLLYLQEEWE----QCVVHRDIKSSNIMLDS-------------NFN----AKIGDFGLA 500
            L Y     +    + V+HRD+K  NI L +             N N    AKIGDFGL+
Sbjct: 130 ALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLS 189

Query: 501 RLVEHAKGSQTTVLAGTMGYMAPECA--TTGKASKESDVYSFGIVALEIACGRKPIN 555
           + +     + + V  GT  Y +PE     T     +SD+++ G +  E+  G+ P +
Sbjct: 190 KNIGIESMAHSCV--GTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH 244

Length = 1021

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 58.5 bits (141), Expect = 3e-09
 Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 5/145 (3%)

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           LV L         L LV E++  G L  H+ ++  L     R+  A ++   L +L E  
Sbjct: 58  LVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARF-YAAEICIALNFLHE-- 114

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK 530
            + +++RD+K  N++LD++ + K+ D+G+ +      G  T+   GT  Y+APE     +
Sbjct: 115 -RGIIYRDLKLDNVLLDADGHIKLTDYGMCK-EGLGPGDTTSTFCGTPNYIAPEILRGEE 172

Query: 531 ASKESDVYSFGIVALEIACGRKPIN 555
                D ++ G++  E+  GR P +
Sbjct: 173 YGFSVDWWALGVLMFEMMAGRSPFD 197

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 59.1 bits (143), Expect = 4e-09
 Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 7/102 (6%)

Query: 461 SGLLYLQ------EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA-KGSQTTV 513
           +GLL++Q          + ++HRDIKS+NI+L SN   K+GDFG +++            
Sbjct: 145 AGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRT 204

Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPIN 555
             GT  Y+APE       SK++D++S G++  E+   ++P +
Sbjct: 205 FCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFD 246

Length = 496

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 57.9 bits (140), Expect = 4e-09
 Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 29/210 (13%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRV-SQGSKQGIKEYA-SEVKIISRLRHRN-LVQL 414
           +K+G+G +G VYK   + T   +A+K+   +  ++GI   A  E+ ++  L     +V+L
Sbjct: 7   EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRL 66

Query: 415 LGWCHE-----KKELLLVYEFMP---------NGSLDSHLFKENSLLTWEFRYKIAQDLA 460
           L   H      K  L LV+E++          NG          ++ ++ ++      L 
Sbjct: 67  LDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQ------LL 120

Query: 461 SGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA-KIGDFGLARLVEHAKGSQTTVLAGTMG 519
            G+ +     +  V+HRD+K  N+++D      KI D GL R       S T  +  T+ 
Sbjct: 121 KGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIV-TLW 176

Query: 520 YMAPECATTGKA-SKESDVYSFGIVALEIA 548
           Y APE        S   D++S G +  E++
Sbjct: 177 YRAPEVLLGSTHYSTPVDIWSVGCIFAEMS 206

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 58.1 bits (140), Expect = 4e-09
 Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 19/201 (9%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLL-- 415
           +G G +G V   +       +AVK++S+  +  I  +    E++++  ++H N++ LL  
Sbjct: 23  VGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDV 82

Query: 416 ----GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
                      E+ LV   M  G+  +++ K   L     ++ I Q L  GL Y+     
Sbjct: 83  FTPATSIENFNEVYLVTNLM--GADLNNIVKCQKLSDEHVQFLIYQ-LLRGLKYIHS--- 136

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA 531
             ++HRD+K SN+ ++ +   +I DFGLAR  +     + T    T  Y APE       
Sbjct: 137 AGIIHRDLKPSNVAVNEDCELRILDFGLARQAD----DEMTGYVATRWYRAPEIMLNWMH 192

Query: 532 SKES-DVYSFGIVALEIACGR 551
             ++ D++S G +  E+  G+
Sbjct: 193 YNQTVDIWSVGCIMAELLKGK 213

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 58.1 bits (140), Expect = 6e-09
 Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 12/216 (5%)

Query: 345 KELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA---SEVK 401
           ++L +   D+   + +G+G FG V     + T    A+K +S+       + A    E  
Sbjct: 36  RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 95

Query: 402 IISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS 461
           I++      +VQL     + + L +V E+MP G L + +   +    W   Y      A 
Sbjct: 96  IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYT-----AE 150

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
            +L L        +HRD+K  N++LD + + K+ DFG    +      +     GT  Y+
Sbjct: 151 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 210

Query: 522 APECATT----GKASKESDVYSFGIVALEIACGRKP 553
           +PE   +    G   +E D +S G+   E+  G  P
Sbjct: 211 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 246

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 57.2 bits (138), Expect = 6e-09
 Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 19/168 (11%)

Query: 402 IISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS 461
           ++S++ H +L  + G C    E ++V EF+ +G LD  L KE   +   ++  +AQ LAS
Sbjct: 69  LMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLAS 128

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG--DFGLARLVEHAKGSQTTVLA---- 515
            L YL+   ++ +VH ++ + NI+L     A++G  +     +     G   T L+    
Sbjct: 129 ALSYLE---DKNLVHGNVCAKNILL-----ARLGLAEGTSPFIKLSDPGVSFTALSREER 180

Query: 516 -GTMGYMAPECATTGKA-SKESDVYSFGIVALEIAC--GRKPINPKAP 559
              + ++APEC   G + S  +D +SFG   LEI C  G  P+  + P
Sbjct: 181 VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI-CFDGEVPLKERTP 227

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 57.1 bits (138), Expect = 1e-08
 Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 48/246 (19%)

Query: 353 DFNDDQKLGQGGFGGVY-------------KGFFRETNSYIAVKRVSQGSKQGIKEYASE 399
           D   D+ +G G FG V+             K       + ++ KRV +           E
Sbjct: 1   DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFR-----------E 49

Query: 400 VKIISRLRHRNLVQLLGWCHEK-----KELLLVYEFMPNGSLDSH-LFKENSLLTWE--- 450
           +K++   +H N++  L           +E+ +V E M +   D H +      L+ +   
Sbjct: 50  LKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQS---DLHKIIVSPQPLSSDHVK 106

Query: 451 -FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS 509
            F Y+I +    GL YL       ++HRDIK  N++++SN   KI DFGLAR+ E  +  
Sbjct: 107 VFLYQILR----GLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK 159

Query: 510 QTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACGRKPINPKAPQGQVSLLQW 568
             T    T  Y APE     +    + D++S G +  E+   R  I  +A Q  +  L  
Sbjct: 160 HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRR--ILFQA-QSPIQQLDL 216

Query: 569 VWDLYG 574
           + DL G
Sbjct: 217 ITDLLG 222

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 55.6 bits (134), Expect = 3e-08
 Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 7/133 (5%)

Query: 424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSN 483
           L  V EF+  G L  H+ ++  L     R+  + +++  L +L E   + +++RD+K  N
Sbjct: 71  LFFVIEFVSGGDLMFHMQRQRKLPEEHARF-YSAEISLALNFLHE---RGIIYRDLKLDN 126

Query: 484 IMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGI 542
           ++LD+  + K+ D+G+ +  E  + G  T+   GT  Y+APE           D ++ G+
Sbjct: 127 VLLDAEGHIKLTDYGMCK--EGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGV 184

Query: 543 VALEIACGRKPIN 555
           +  E+  GR P +
Sbjct: 185 LMFEMMAGRSPFD 197

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 55.7 bits (134), Expect = 3e-08
 Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 24/203 (11%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLG- 416
           +G G +G V     + T   +A+K++S+  +  I  K    E+ ++  ++H N++ LL  
Sbjct: 23  VGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDV 82

Query: 417 -----WCHEKKELLLVYEFMPN--GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
                   E ++  LV  +M      +  H   E+ +     +Y + Q L  GL Y+   
Sbjct: 83  FTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKV-----QYLVYQML-CGLKYIHS- 135

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG 529
               ++HRD+K  N+ ++ +   KI DFGLAR   HA    T  +  T  Y APE     
Sbjct: 136 --AGIIHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVV-TRWYRAPEVILNW 189

Query: 530 -KASKESDVYSFGIVALEIACGR 551
              ++  D++S G +  E+  G+
Sbjct: 190 MHYNQTVDIWSVGCIMAEMLTGK 212

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 55.4 bits (133), Expect = 3e-08
 Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 35/222 (15%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL 411
           +DF   + +G+G FG V     + T    A+K +++       E A         R    
Sbjct: 1   DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETAC-------FREERN 53

Query: 412 VQLLGWCH----------EKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD--- 458
           V + G C           ++  L LV ++   G L + L K        F  ++ +D   
Sbjct: 54  VLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSK--------FEDRLPEDMAR 105

Query: 459 --LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG 516
             +A  +L +    +   VHRDIK  N++LD N + ++ DFG    +      Q++V  G
Sbjct: 106 FYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVG 165

Query: 517 TMGYMAPECATT-----GKASKESDVYSFGIVALEIACGRKP 553
           T  Y++PE         GK   E D +S G+   E+  G  P
Sbjct: 166 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 207

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 54.0 bits (130), Expect = 6e-08
 Identities = 54/263 (20%), Positives = 109/263 (41%), Gaps = 29/263 (11%)

Query: 368 VYKGFFRETNSYI-AVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW----CHEKK 422
           +YKG F      I   K+  +G K  I    +E+K + R+   N++++ G+      +  
Sbjct: 36  IYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLP 95

Query: 423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS 482
            L L+ E+   G L   L KE  L +++ +  +A D   GL  L +   +   ++++ S 
Sbjct: 96  RLSLILEYCTRGYLREVLDKEKDL-SFKTKLDMAIDCCKGLYNLYKYTNK--PYKNLTSV 152

Query: 483 NIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT--GKASKESDVYSF 540
           + ++  N+  KI   GL +++              M Y + +       + + + D+YS 
Sbjct: 153 SFLVTENYKLKIICHGLEKILSSPPFKNVN----FMVYFSYKMLNDIFSEYTIKDDIYSL 208

Query: 541 GIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           G+V  EI  G+ P      +    L+           + +    +L    D     + ++
Sbjct: 209 GVVLWEIFTGKIPFENLTTKEIYDLI-----------INKNNSLKL--PLDCPLEIKCIV 255

Query: 601 VGLWCAHPDENLRPSIRQVIHVL 623
               C   D   RP+I+++++ L
Sbjct: 256 EA--CTSHDSIKRPNIKEILYNL 276

Length = 283

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 55.1 bits (132), Expect = 6e-08
 Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 17/173 (9%)

Query: 383 KRVSQGSKQGIKEYASEVKIISRLRHRNLVQL--------LGWCHEKKELLLVYEFMPNG 434
           KRV  GS+  I +  +E+  + RL H N++++          +   +K    +Y FM + 
Sbjct: 198 KRVKAGSRAAI-QLENEILALGRLNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDE 256

Query: 435 SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKI 494
           + D   +K+  LL  + R  I + L   + Y+ +   + ++HRDIK  NI L+ +    +
Sbjct: 257 AFD---WKDRPLL-KQTR-AIMKQLLCAVEYIHD---KKLIHRDIKLENIFLNCDGKIVL 308

Query: 495 GDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
           GDFG A   E  + +      GT+   +PE        + +D++S G++ L++
Sbjct: 309 GDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDM 361

Length = 501

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 54.5 bits (131), Expect = 8e-08
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 10/151 (6%)

Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP--NGSLDSHLFKENSLLTWEFRYKIA 456
           E  ++  + H +++++           +V   +P  +  L ++L K +  L  +    I 
Sbjct: 107 EAMLLQNVNHPSVIRMKDTLVSGAITCMV---LPHYSSDLYTYLTKRSRPLPIDQALIIE 163

Query: 457 QDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG 516
           + +  GL YL     Q ++HRD+K+ NI ++      IGD G A+    A       LAG
Sbjct: 164 KQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLG--LAG 218

Query: 517 TMGYMAPECATTGKASKESDVYSFGIVALEI 547
           T+   APE     K + ++D++S GIV  E+
Sbjct: 219 TVETNAPEVLARDKYNSKADIWSAGIVLFEM 249

Length = 357

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 54.5 bits (131), Expect = 9e-08
 Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 15/108 (13%)

Query: 451 FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ 510
           F  ++AQ    G+ +L  +   C+ HRD+ + N++L     AKI DFGLAR + +     
Sbjct: 217 FSSQVAQ----GMDFLASK--NCI-HRDVAARNVLLTDGRVAKICDFGLARDIMN---DS 266

Query: 511 TTVLAGT----MGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKP 553
             V+ G     + +MAPE       + +SDV+S+GI+  EI + G+ P
Sbjct: 267 NYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSP 314

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 53.1 bits (127), Expect = 2e-07
 Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 25/216 (11%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHR 409
           DF   + +G+G FG V     +  +   A+K +++       E A    E  ++    ++
Sbjct: 2   DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQ 61

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
            +  L     ++  L LV ++   G L + L K        F  ++ +D+A    YL E 
Sbjct: 62  WITTLHYAFQDENNLYLVMDYYVGGDLLTLLSK--------FEDRLPEDMAR--FYLAEM 111

Query: 470 -------WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
                   +   VHRDIK  NI++D N + ++ DFG    +      Q++V  GT  Y++
Sbjct: 112 VIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYIS 171

Query: 523 PECATT-----GKASKESDVYSFGIVALEIACGRKP 553
           PE         GK   E D +S G+   E+  G  P
Sbjct: 172 PEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETP 207

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 53.1 bits (127), Expect = 2e-07
 Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 14/170 (8%)

Query: 385 VSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKEN 444
           +  G + G    A+E  I+  + H +++QL G     K   L+   +P    D + +   
Sbjct: 122 IKAGQRGGT---ATEAHILRAINHPSIIQLKGTFTYNKFTCLI---LPRYKTDLYCY--- 172

Query: 445 SLLTWEFRYKIAQDLA---SGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR 501
             L  +    I   LA   S L  +Q   E  ++HRDIK+ NI ++   +  +GDFG A 
Sbjct: 173 --LAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAAC 230

Query: 502 LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
                  ++    AGT+   APE           D++S GIV  E+A   
Sbjct: 231 FPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCH 280

Length = 391

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 52.7 bits (126), Expect = 3e-07
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 25/210 (11%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS---QGSKQGIKEYASEVKIISRLRHRN 410
           + + + +G G  G V   +       +A+K++S   Q      + Y  E+ ++  + H+N
Sbjct: 26  YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 84

Query: 411 LVQLLG------WCHEKKELLLVYEFMPNGSLDSHLFK--ENSLLTWEFRYKIAQDLASG 462
           ++ LL          E +++ +V E M     D++L +  +  L      Y + Q L  G
Sbjct: 85  IIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYLLYQMLC-G 138

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
           + +L       ++HRD+K SNI++ S+   KI DFGLAR    +      V+  T  Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRA 193

Query: 523 PECATTGKASKES-DVYSFGIVALEIACGR 551
           PE    G   KE+ D++S G +  E+  G 
Sbjct: 194 PE-VILGMGYKENVDIWSVGCIMGEMIKGG 222

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 52.1 bits (125), Expect = 3e-07
 Identities = 58/233 (24%), Positives = 101/233 (43%), Gaps = 26/233 (11%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRH 408
            DF   + +  G +G VY    +ET    A+K++++ +   +  I++   E  I++   +
Sbjct: 1   EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAEN 60

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEF-RYKIAQDLASGLLYLQ 467
             +V +      K+ L +V E++  G   + L K    L  +  R   A+ + + L YL 
Sbjct: 61  PFVVSMFCSFETKRHLCMVMEYVEGGDCAT-LLKNIGALPVDMARMYFAETVLA-LEYLH 118

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR---------LVEH-----AKGSQTTV 513
                 +VHRD+K  N+++ S  + K+ DFGL++         L E       +      
Sbjct: 119 N---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQ 175

Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQ---GQV 563
           + GT  Y+APE        K  D ++ GI+  E   G  P     P+   GQV
Sbjct: 176 VCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV 228

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 51.9 bits (124), Expect = 6e-07
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 12/121 (9%)

Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P  +    L  E+  L++      +  +A+G+ +L  +   CV HRD+ + N+++     
Sbjct: 221 PERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK--NCV-HRDLAARNVLICEGKL 277

Query: 492 AKIGDFGLARLVEH-----AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALE 546
            KI DFGLAR +       +KGS  T L   + +MAPE       +  SDV+SFGI+  E
Sbjct: 278 VKICDFGLARDIMRDSNYISKGS--TFLP--LKWMAPESIFNNLYTTLSDVWSFGILLWE 333

Query: 547 I 547
           I
Sbjct: 334 I 334

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 51.3 bits (123), Expect = 7e-07
 Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 7/85 (8%)

Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECAT-----T 528
           VHRDIK  N++LD N + ++ DFG + L   A G+ Q+ V  GT  Y++PE         
Sbjct: 124 VHRDIKPDNVLLDKNGHIRLADFG-SCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGK 182

Query: 529 GKASKESDVYSFGIVALEIACGRKP 553
           G+   E D +S G+   E+  G  P
Sbjct: 183 GRYGPECDWWSLGVCMYEMLYGETP 207

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 50.9 bits (122), Expect = 8e-07
 Identities = 73/288 (25%), Positives = 117/288 (40%), Gaps = 43/288 (14%)

Query: 362 QGGFGGVYKGFFRETNSY----IAVKRVSQGSKQ-GIKEYASEVKIISRLRHRNLVQLLG 416
           +G FG ++ G   +        + VK V   + +  +     E  ++  L H+N++ +L 
Sbjct: 16  EGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILH 75

Query: 417 WCHEKKELLLV-YEFMPNGSLDSHL--------FKENSLLTWEFRYKIAQDLASGLLYLQ 467
            C E  E   V Y +M  G+L   L            +L T +    +A  +A G+ YL 
Sbjct: 76  VCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQL-VHMAIQIACGMSYLH 134

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAP 523
           +   + V+H+DI + N ++D     KI D  L+R +     H  G         + +MA 
Sbjct: 135 K---RGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNEN---RPVKWMAL 188

Query: 524 ECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV 582
           E     + S  SDV+SFG++  E+   G+ P     P    + L+       +G  L   
Sbjct: 189 ESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLK-------DGYRLA-- 239

Query: 583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL-NFEAPL 629
            P  C D        L  V   C   D   RPS  Q++  L +F A L
Sbjct: 240 QPINCPD-------ELFAVMACCWALDPEERPSFSQLVQCLTDFHAQL 280

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 51.0 bits (122), Expect = 1e-06
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 14/101 (13%)

Query: 451 FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ 510
           F Y++A+    G+ +L  +   C+ HRD+ + NI+L      KI DFGLAR +   +   
Sbjct: 219 FSYQVAK----GMSFLASK--NCI-HRDLAARNILLTHGRITKICDFGLARDI---RNDS 268

Query: 511 TTVLAGT----MGYMAPECATTGKASKESDVYSFGIVALEI 547
             V+ G     + +MAPE       + ESDV+S+GI+  EI
Sbjct: 269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEI 309

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 50.8 bits (121), Expect = 1e-06
 Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVS---QGSKQGIKEYASEVKIISRLRHRNLVQL 414
           + +G G  G V   F       +AVK++S   Q      + Y  E+ ++  + H+N++ L
Sbjct: 27  KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISL 85

Query: 415 LG------WCHEKKELLLVYEFMPNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQ 467
           L          E +++ LV E M     D++L +   + L  E    +   +  G+ +L 
Sbjct: 86  LNVFTPQKSLEEFQDVYLVMELM-----DANLCQVIHMELDHERMSYLLYQMLCGIKHLH 140

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT 527
                 ++HRD+K SNI++ S+   KI DFGLAR          T    T  Y APE   
Sbjct: 141 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--CTNFMMTPYVVTRYYRAPEVIL 195

Query: 528 TGKASKESDVYSFGIVALEIACG 550
                +  D++S G +  E+  G
Sbjct: 196 GMGYKENVDIWSVGCIMGELVKG 218

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 50.8 bits (121), Expect = 1e-06
 Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 28/171 (16%)

Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH-----AKGSQTTV 513
           +A G+ +L     +C+ HRD+ + NI+L  N   KI DFGLAR +        KGS    
Sbjct: 183 VARGMEFLASR--KCI-HRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239

Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDL 572
           L     +MAPE       + +SDV+SFG++  EI + G  P     P  Q++  +     
Sbjct: 240 LK----WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPY----PGVQIN--EEFCQR 289

Query: 573 YGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
             +G  + A       +    +I R+M   L C   D   RP+   ++ +L
Sbjct: 290 LKDGTRMRA------PENATPEIYRIM---LACWQGDPKERPTFSALVEIL 331

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 50.8 bits (121), Expect = 1e-06
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 54/261 (20%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQL 414
           + LG G FG V      +T++  A+K + +    ++  +    +E  I++   +  +V+L
Sbjct: 7   KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKL 66

Query: 415 LGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCV 474
                +K  L  V +++P G + S L +         R+ IA+      L ++   +   
Sbjct: 67  YYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELT----LAIESVHKMGF 122

Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLA---------------------------------- 500
           +HRDIK  NI++D + + K+ DFGL                                   
Sbjct: 123 IHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSN 182

Query: 501 --------RLVEHAKGSQTTVLA----GTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
                    L + A       LA    GT  Y+APE       ++  D +S G++  E+ 
Sbjct: 183 CRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEML 242

Query: 549 CGRKP-INPKAPQGQVSLLQW 568
            G+ P + P   + Q+ ++ W
Sbjct: 243 VGQPPFLAPTPTETQLKVINW 263

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 50.4 bits (120), Expect = 2e-06
 Identities = 65/290 (22%), Positives = 114/290 (39%), Gaps = 59/290 (20%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRN 410
           F   + LG G FG V      +T +  A+K + +     +  +    +E  I++   +  
Sbjct: 3   FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEW 62

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           +V+L     +K  L  V +++P G + S L +         R+ IA+   +    ++   
Sbjct: 63  VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCA----VESVH 118

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLA---RLVEHAKGSQTT--------------- 512
           +   +HRDIK  NI++D + + K+ DFGL    R    +K  Q+                
Sbjct: 119 KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWG 178

Query: 513 ----------------------------VLAGTMGYMAPECATTGKASKESDVYSFGIVA 544
                                        L GT  Y+APE       ++  D +S G++ 
Sbjct: 179 DPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238

Query: 545 LEIACGRKPINPKAP-QGQVSLLQWVWDLY--GNGKLL-EAVD--PRLCR 588
            E+  G+ P   + P + Q+ ++ W   L+     KL  EA D   +LCR
Sbjct: 239 YEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCR 288

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 50.8 bits (121), Expect = 2e-06
 Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW-- 417
           +G G FG VY+    +T+  +A+K+V Q  +   +    E+ I+  L H N++ L  +  
Sbjct: 74  IGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNR----ELLIMKNLNHINIIFLKDYYY 129

Query: 418 --CHEKKE----LLLVYEFMPNG--SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
             C +K E    L +V EF+P        H  + N  L        +  L   L Y+  +
Sbjct: 130 TECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK 189

Query: 470 WEQCVVHRDIKSSNIMLDSNFNA-KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT- 527
           +   + HRD+K  N+++D N +  K+ DFG A+ +    G ++     +  Y APE    
Sbjct: 190 F---ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNL--LAGQRSVSYICSRFYRAPELMLG 244

Query: 528 TGKASKESDVYSFGIVALEIACG 550
               +   D++S G +  E+  G
Sbjct: 245 ATNYTTHIDLWSLGCIIAEMILG 267

Length = 440

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 49.6 bits (118), Expect = 3e-06
 Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 16/102 (15%)

Query: 451 FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH----- 505
           F Y++A+    G+ +L  +   CV HRD+ + N++L      KI DFGLAR + H     
Sbjct: 242 FTYQVAR----GMEFLASK--NCV-HRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYV 294

Query: 506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
           +KGS  T L   + +MAPE       +  SDV+S+GI+  EI
Sbjct: 295 SKGS--TFLP--VKWMAPESIFDNLYTTLSDVWSYGILLWEI 332

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 49.4 bits (118), Expect = 3e-06
 Identities = 68/287 (23%), Positives = 111/287 (38%), Gaps = 63/287 (21%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLG 416
           +G G FG V      +TN+  A+K + +     +       +E  I++   +  +V+L  
Sbjct: 9   IGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYY 68

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFK----ENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
              +K  L  V +++P G + S L +    E  L     R+ IA+ L   +  + +    
Sbjct: 69  SFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLA----RFYIAE-LTCAIESVHK---M 120

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGL------------------AR------------- 501
             +HRDIK  NI++D + + K+ DFGL                   R             
Sbjct: 121 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEI 180

Query: 502 -------LVEHAKGSQTTVLA----GTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
                  L    K      LA    GT  Y+APE       ++  D +S G++  E+  G
Sbjct: 181 DRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 240

Query: 551 RKPINPKAPQG-QVSLLQWVWDLY--GNGKL-LEAVD--PRLCRDFD 591
           + P     P   Q+ ++ W   L+     KL  EA D   RLC   +
Sbjct: 241 QPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLCCGAE 287

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 49.3 bits (118), Expect = 4e-06
 Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 35/209 (16%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQ------GSKQGIKEYASEVKIISRLRHRNLVQ 413
           +G G  G V   +   T   +A+K++S+       +K+  +E      ++  + H+N++ 
Sbjct: 24  IGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYREL----VLMKLVNHKNIIG 79

Query: 414 LLGW------CHEKKELLLVYEFMPNGSLDSHLFKE-NSLLTWE-FRYKIAQDLASGLLY 465
           LL          E +++ LV E M     D++L +     L  E   Y + Q L  G+ +
Sbjct: 80  LLNVFTPQKSLEEFQDVYLVMELM-----DANLCQVIQMDLDHERMSYLLYQMLC-GIKH 133

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT--TVLAGTMGYMAP 523
           L       ++HRD+K SNI++ S+   KI DFGLAR      G+    T    T  Y AP
Sbjct: 134 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAP 186

Query: 524 ECATTGKASKES-DVYSFGIVALEIACGR 551
           E    G   KE+ D++S G +  E+  G 
Sbjct: 187 E-VILGMGYKENVDIWSVGCIMGEMIRGT 214

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 49.3 bits (117), Expect = 4e-06
 Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 23/205 (11%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS---QGSKQGIKEYASEVKIISRLRHRN 410
           + + + +G G  G V   +    +  +A+K++S   Q      + Y  E+ ++  + H+N
Sbjct: 19  YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKN 77

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKE--NSLLTWEFRYKIAQDLASGLLY--- 465
           ++ LL     +K L    EF      D +L  E  ++ L    + ++  +  S LLY   
Sbjct: 78  IISLLNVFTPQKSL---EEFQ-----DVYLVMELMDANLCQVIQMELDHERMSYLLYQML 129

Query: 466 --LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAP 523
             ++      ++HRD+K SNI++ S+   KI DFGLAR          T    T  Y AP
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAP 187

Query: 524 ECATTGKASKES-DVYSFGIVALEI 547
           E    G   KE+ D++S G +  E+
Sbjct: 188 E-VILGMGYKENVDIWSVGCIMGEM 211

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 48.7 bits (116), Expect = 4e-06
 Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 9/78 (11%)

Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLARLVEH-----AKGSQTTVLAGTMGYMAPECATTG 529
           +HRD+ + NI+L  N   KI DFGLAR +        KG     L     +MAPE     
Sbjct: 195 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK----WMAPESIFDK 250

Query: 530 KASKESDVYSFGIVALEI 547
             + +SDV+SFG++  EI
Sbjct: 251 VYTTQSDVWSFGVLLWEI 268

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 48.9 bits (116), Expect = 5e-06
 Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 12/94 (12%)

Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH-----AKGSQTTV 513
           +A G+ +L     +C+ HRD+ + NI+L  N   KI DFGLAR +        KG     
Sbjct: 188 VAKGMEFLASR--KCI-HRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 244

Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
           L     +MAPE       + +SDV+SFG++  EI
Sbjct: 245 LK----WMAPETIFDRVYTIQSDVWSFGVLLWEI 274

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 48.4 bits (116), Expect = 5e-06
 Identities = 54/239 (22%), Positives = 86/239 (35%), Gaps = 47/239 (19%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHR 409
            F   + LG+G  G V+    + T    A+K + +       +     +E +I++ L H 
Sbjct: 2   HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHP 61

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-------FKENSLLTWEFRYKIAQDLASG 462
            L  L      +  L LV ++ P G L   L         E        R+  A+ L   
Sbjct: 62  FLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVA-----RFYAAEVLL-A 115

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-------RLVEHAKGSQT---- 511
           L YL       +V+RD+K  NI+L  + +  + DF L+         V  A    +    
Sbjct: 116 LEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSS 172

Query: 512 -------TVLA----------GTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
                  T             GT  Y+APE  +        D ++ GI+  E+  G  P
Sbjct: 173 VNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTP 231

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 48.4 bits (115), Expect = 7e-06
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 10/98 (10%)

Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV- 513
           +A+ L S + Y+  E    ++HRDIK+ N++++   +  +GDFG A     A+GS +T  
Sbjct: 265 VARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACF---ARGSWSTPF 318

Query: 514 ---LAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
              +AGT+   APE       +   D++S G+V  E A
Sbjct: 319 HYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAA 356

Length = 461

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 47.5 bits (114), Expect = 9e-06
 Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 20/152 (13%)

Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
           + N ++L       K  +L+ +++ +G L   L KE  L   E + KI + L   L  L 
Sbjct: 68  NPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVK-KIIRQLVEALNDLH 126

Query: 468 EEWEQCVVHRDIKSSNIMLD-SNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECA 526
           +     ++H DIK  N++ D +     + D+GL + +            GT+ Y +PE  
Sbjct: 127 K---HNIIHNDIKLENVLYDRAKDRIYLCDYGLCK-IIGTPS----CYDGTLDYFSPE-- 176

Query: 527 TTGKASKESDVYSF-----GIVALEIACGRKP 553
              K    +   SF     G++  E+  G+ P
Sbjct: 177 ---KIKGHNYDVSFDWWAVGVLTYELLTGKHP 205

Length = 267

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 43.7 bits (103), Expect = 2e-04
 Identities = 53/251 (21%), Positives = 97/251 (38%), Gaps = 53/251 (21%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRH 408
            DF+  + +G+G FG V     ++T    A+K + +     K  +    +E  +++    
Sbjct: 1   EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDS 60

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
             +V L     + + L L+ EF+P G L + L K ++      R+ +A+     +L ++ 
Sbjct: 61  PWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAE----CVLAIEA 116

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-------------RLVE------HAKGS 509
             +   +HRDIK  NI++D   + K+ DFGL+             +L++           
Sbjct: 117 VHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNR 176

Query: 510 QTTVL---------------------------AGTMGYMAPECATTGKASKESDVYSFGI 542
            +  +                            GT  Y+APE        +E D +S G 
Sbjct: 177 NSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236

Query: 543 VALEIACGRKP 553
           +  E   G  P
Sbjct: 237 IMFECLIGWPP 247

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 25/208 (12%)

Query: 359 KLGQGGFGGVYKGFFRE--TNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLVQL- 414
           K+G+G +G VYK   ++       A+K++ +G+  GI   A  E+ ++  L+H N++ L 
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDEKEYALKQI-EGT--GISMSACREIALLRELKHPNVIALQ 64

Query: 415 -LGWCHEKKELLLVYEFMPNG-------SLDSHLFKENSLLTWEFRYKIAQDLASGLLYL 466
            +   H  +++ L++++  +           S   K+   L       +   +  G+ YL
Sbjct: 65  KVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL 124

Query: 467 QEEWEQCVVHRDIKSSNIML----DSNFNAKIGDFGLARLVEHAKGSQTTV--LAGTMGY 520
              W   V+HRD+K +NI++          KI D G ARL          +  +  T  Y
Sbjct: 125 HANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 181

Query: 521 MAPECATTGKA-SKESDVYSFGIVALEI 547
            APE     +  +K  D+++ G +  E+
Sbjct: 182 RAPELLLGARHYTKAIDIWAIGCIFAEL 209

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 43.1 bits (101), Expect = 3e-04
 Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 57/224 (25%)

Query: 359 KLGQGGFGGVYKGFFRE--TNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLVQL- 414
           K+G+G +G VYK   ++   +   A+K++ +G+  GI   A  E+ ++  L+H N++ L 
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDDRDYALKQI-EGT--GISMSACREIALLRELKHPNVISLQ 64

Query: 415 -LGWCHEKKELLLVYEF-----------------------MPNGSLDSHLFKENSLLTWE 450
            +   H  +++ L++++                       +P G + S L++        
Sbjct: 65  KVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQ-------- 116

Query: 451 FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML----DSNFNAKIGDFGLARLVEHA 506
                   +  G+ YL   W   V+HRD+K +NI++          KI D G ARL    
Sbjct: 117 --------ILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 165

Query: 507 KGSQTTV--LAGTMGYMAPECATTGKA-SKESDVYSFGIVALEI 547
                 +  +  T  Y APE     +  +K  D+++ G +  E+
Sbjct: 166 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 209

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 41.0 bits (96), Expect = 0.001
 Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 8/106 (7%)

Query: 339 PKRFPYKE-LALATNDFNDDQKLGQGGFGGVYK----GFFRETNSY-IAVKRVSQGSKQG 392
           P + PY E      ++    + LG G FG V +    G  +E N   +AVK +   +   
Sbjct: 24  PTQLPYNEKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTD 83

Query: 393 IKE-YASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
            +E   SE+KI+S L +H+N+V LLG C     +L++ E+   G L
Sbjct: 84  EREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDL 129

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 41.0 bits (96), Expect = 0.002
 Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 17/158 (10%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHR 409
           +F   + + +G FG VY G  +  +   AVK V +    +K  + +  +E   ++  +  
Sbjct: 5   EFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSP 64

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLASGLL 464
            +V L         + LV E++  G + S L     F E      E   K   ++A  L 
Sbjct: 65  FIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDE------EMAVKYISEVALALD 118

Query: 465 YLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL 502
           YL       ++HRD+K  N+++ +  + K+ DFGL+++
Sbjct: 119 YLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	645
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd06899	236	lectin_legume_LecRK_Arcelin_ConA legume lectins, l	100.0
PF00139	236	Lectin_legB: Legume lectin domain; InterPro: IPR00	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd01951	223	lectin_L-type legume lectins. The L-type (legume-t	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.98
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.98
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.98
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.98
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.98
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.98
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.98
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.98
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.97
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.97
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.97
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.97
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.97
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.96
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.96
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.96
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.96
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.96
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.95
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.95
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.95
KOG1152	772	consensus Signal transduction serine/threonine kin	99.94
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.94
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.94
PLN00181	793	protein SPA1-RELATED; Provisional	99.94
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.94
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.93
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.92
PRK09188	365	serine/threonine protein kinase; Provisional	99.9
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.88
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.88
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.87
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.86
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.86
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.85
cd07308	218	lectin_leg-like legume-like lectins: ERGIC-53, ERG	99.83
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.82
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.8
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.8
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.8
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.79
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.78
PRK12274	218	serine/threonine protein kinase; Provisional	99.78
PRK10345	210	hypothetical protein; Provisional	99.77
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.71
smart00090	237	RIO RIO-like kinase.	99.71
PRK14879	211	serine/threonine protein kinase; Provisional	99.71
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.7
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.69
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.68
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.68
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.65
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.64
cd06901	248	lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembr	99.64
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.64
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.62
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.58
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.54
cd06902	225	lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 tran	99.54
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.5
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.49
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.4
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.37
PF03388	229	Lectin_leg-like: Legume-like lectin family; InterP	99.26
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.26
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.24
cd06903	215	lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmem	99.22
KOG1243	690	consensus Protein kinase [General function predict	99.21
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.16
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.14
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.11
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.07
KOG3087	229	consensus Serine/threonine protein kinase [General	98.93
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.93
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.88
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.76
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.66
KOG3838	497	consensus Mannose lectin ERGIC-53, involved in gly	98.54
KOG3839	351	consensus Lectin VIP36, involved in the transport	98.51
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.5
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.46
COG4248	637	Uncharacterized protein with protein kinase and he	98.45
cd06900	255	lectin_VcfQ VcfQ bacterial pilus biogenesis protei	98.45
PRK09902	216	hypothetical protein; Provisional	98.37
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.35
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.25
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.18
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.12
PF01636	239	APH: Phosphotransferase enzyme family This family	98.0
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.0
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.99
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.95
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.94
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.89
PLN02876	822	acyl-CoA dehydrogenase	97.81
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.7
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.64
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.61
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.51
PRK10593	297	hypothetical protein; Provisional	97.5
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.49
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.46
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.36
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.34
PRK05231	319	homoserine kinase; Provisional	97.23
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.17
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.05
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	96.74
PLN02236	344	choline kinase	96.5
KOG2268	465	consensus Serine/threonine protein kinase [Signal	96.43
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	96.4
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	96.39
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	96.14
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.0
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.99
KOG1093	725	consensus Predicted protein kinase (contains TBC a	95.73
PLN02756	418	S-methyl-5-thioribose kinase	95.66
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	95.35
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	95.27
KOG2270	520	consensus Serine/threonine protein kinase involved	95.05

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.5e-58  Score=482.67  Aligned_cols=287  Identities=48%  Similarity=0.832  Sum_probs=257.9

Q ss_pred             CCCccChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEee
Q 042831          338 GPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW  417 (645)
Q Consensus       338 ~~~~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~  417 (645)
                      ..+.|+++|+..||++|+..+.||+|+||.||+|.+.+ +..||||++.....+..++|.+|++++++++|||||+|+||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy  139 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY  139 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence            46789999999999999999999999999999999986 48899998876554325679999999999999999999999


Q ss_pred             eeeCC-eEEEEEEecCCCChhhhhhhcCC-CCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEe
Q 042831          418 CHEKK-ELLLVYEFMPNGSLDSHLFKENS-LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG  495 (645)
Q Consensus       418 ~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~  495 (645)
                      |.+.+ +.+||||||++|+|.++|+.... .++|.+|++|+.++|+||+|||+.+.+.|+||||||+|||||+++++||+
T Consensus       140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls  219 (361)
T KOG1187|consen  140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS  219 (361)
T ss_pred             EecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence            99998 59999999999999999987766 89999999999999999999999998899999999999999999999999


Q ss_pred             eccCcccccccCCcceeec-ccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc
Q 042831          496 DFGLARLVEHAKGSQTTVL-AGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG  574 (645)
Q Consensus       496 DfGla~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~  574 (645)
                      |||+|+..... ....... .||.+|+|||++..+..+.|+|||||||+|+||+||+.+.+...+.....+++|++..+.
T Consensus       220 DFGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~  298 (361)
T KOG1187|consen  220 DFGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE  298 (361)
T ss_pred             CccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH
Confidence            99999765431 1111222 799999999999999999999999999999999999999887665566679999999999


Q ss_pred             CCccccccCcccc-CCCCH-HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          575 NGKLLEAVDPRLC-RDFDG-QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       575 ~~~l~~~~d~~l~-~~~~~-~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ++++.+++|+++. ..+.. ++++++..++++|++.+|++||+|.||++.|+..
T Consensus       299 ~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~  352 (361)
T KOG1187|consen  299 EGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI  352 (361)
T ss_pred             CcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence            9999999999997 66665 7899999999999999999999999999999544

>cd06899 lectin_legume_LecRK_Arcelin_ConA legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor

Probab=100.00  E-value=3.7e-53  Score=422.05  Aligned_cols=226  Identities=43%  Similarity=0.662  Sum_probs=205.6

Q ss_pred             eeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C--CCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCC
Q 042831           35 LTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N--RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYY  110 (645)
Q Consensus        35 ~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~--~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~  110 (645)
                      ++|+|++|... .+++.++ +|.+..++.|+||+ .  ..+.|||+|++||+||++.+++++||+|+|+|.|.+.....+
T Consensus         1 ~~f~f~~f~~~-~~~l~l~G~A~~~~~~~i~LT~~~~~~~~~G~v~y~~pi~l~~~~~~~~~sFst~F~F~i~~~~~~~~   79 (236)
T cd06899           1 LSFNFNGFSSD-QSNLTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDSTTGKVASFSTSFSFSITPPNPSLG   79 (236)
T ss_pred             CceecCCCCCC-CCCEEEecceEcCCCCeEEecCCCCCCcceEEEEeCCCEEeecCCCCCceeEEEEEEEEEEcCCCCCC
Confidence            47999999865 5689999 99995589999999 5  678999999999999999999999999999999998766778


Q ss_pred             CCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC--CCCCCCceeeecCCCcccceeeecc---
Q 042831          111 ADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS--WDPTFSHVGIDINSVKSKKNVSWWS---  185 (645)
Q Consensus       111 g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~--~d~~~~hvgidvns~~s~~~~~~~~---  185 (645)
                      ||||||||+|.... +.++.|++|||++..+.++..+++|||||||++|.  +||++||||||||++.|..+.+|..   
T Consensus        80 gdGlAF~i~~~~~~-~~~~~G~~lG~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~nHigIdvn~~~S~~~~~~~~~~~  158 (236)
T cd06899          80 GDGLAFFLAPTDSL-PPASSGGYLGLFNSSNNGNSSNHIVAVEFDTFQNPEFGDPDDNHVGIDVNSLVSVKAGYWDDDGG  158 (236)
T ss_pred             CCeEEEEEecCCCC-CCCCCcceeeeecCCCCCCcccceEEEEeecccCcccCCCCCCeEEEEcCCcccceeeccccccc
Confidence            99999999998865 34788999999998776677899999999999998  4999999999999999998888743   


Q ss_pred             cCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccceeeeEEEEEeeccCc
Q 042831          186 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSS  262 (645)
Q Consensus       186 ~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~wsf~~~  262 (645)
                      ++.+|+.++|||+||+.+++|+|+|.+.+..+|..|++++.+||+++|+++|||||||+||...|.|+|++|+|++.
T Consensus       159 ~l~~g~~~~v~I~Y~~~~~~L~V~l~~~~~~~~~~~~ls~~vdL~~~l~~~~~vGFSasTG~~~~~h~i~sWsF~s~  235 (236)
T cd06899         159 KLKSGKPMQAWIDYDSSSKRLSVTLAYSGVAKPKKPLLSYPVDLSKVLPEEVYVGFSASTGLLTELHYILSWSFSSN  235 (236)
T ss_pred             cccCCCeEEEEEEEcCCCCEEEEEEEeCCCCCCcCCEEEEeccHHHhCCCceEEEEEeEcCCCcceEEEEEEEEEcC
Confidence            36799999999999999999999999887778889999999999999999999999999999999999999999875

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by bindin

>PF00139 Lectin_legB: Legume lectin domain; InterPro: IPR001220 Legume lectins are one of the largest lectin families with more than 70 lectins reported

Probab=100.00  E-value=1.6e-50  Score=404.41  Aligned_cols=223  Identities=39%  Similarity=0.618  Sum_probs=197.7

Q ss_pred             eeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CC-CceEEEEeCCceecccCCCCCccceeEEEEEEEeeC--CCC
Q 042831           34 ALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NR-ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSR--NSS  108 (645)
Q Consensus        34 ~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~-~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~--~~~  108 (645)
                      +++|+|++|. + ..++.+. +|.+..+|.|+||+ .. .+.|||+|++||+|||+.+++++||+|+|+|.|...  ...
T Consensus         1 ~~~F~~~~F~-~-~~~~~l~G~A~~~~~~~l~LT~~~~~~~~G~~~y~~pi~l~d~~~~~~~sF~t~F~f~i~~~~~~~~   78 (236)
T PF00139_consen    1 SVSFSFPSFS-N-SSNLTLNGDASISSNGSLQLTPDSTNNQAGRAWYNNPIQLWDSTTGNVASFSTSFSFSITNGPGSSN   78 (236)
T ss_dssp             EEEEEESSBT-T-GTTEEEEETEEEETTSEEESSTBETSSEEEEEEESSEEESBETTTTEBEEEEEEEEEEEEESSSSSS
T ss_pred             CceEEcCCCC-C-CCceEEEeeEEeccCCeEEcCCCCCCCcEEEEEECCcEEEeCCCCcceeeeeeEEEEEEeccCCCCc
Confidence            4689999993 2 5689999 99986789999999 55 799999999999999999999999999999999643  456


Q ss_pred             CCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC--CCCCCCceeeecCCCcccceee----
Q 042831          109 YYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS--WDPTFSHVGIDINSVKSKKNVS----  182 (645)
Q Consensus       109 ~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~--~d~~~~hvgidvns~~s~~~~~----  182 (645)
                      .+||||||||+|.. ..+.++.|++||+++..+.+...++.|||||||++|.  .||++||||||+|++.|..+.+    
T Consensus        79 ~~~dGlAFvi~~~~-~~~~~~~g~~lG~~~~~~~~~~~~~~vAVEFDT~~N~~~~d~~~nHIgI~~n~~~s~~~~~~~~~  157 (236)
T PF00139_consen   79 NGGDGLAFVIQPDP-NLPGGSSGGYLGLFNSSTDGNGINNSVAVEFDTYKNPEYNDPDDNHIGIDVNSVVSNKTASAGYY  157 (236)
T ss_dssp             S-BEEEEEEEEETT-SSTTTSSGGGTTTSSSSSTTGGGGCEEEEEEETSTCGGGTTTSSSEEEEEESSSSESEEEE----
T ss_pred             cCCCceEEEEecCc-ccccCCCCCccCccccccCCCccCcEEEEEEeeeecccccccCCCEEEEECCCCccccccccccc
Confidence            78999999999998 6577789999999988776666889999999999986  8999999999999999888743    


Q ss_pred             --ecccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccceeeeEEEEEeecc
Q 042831          183 --WWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFN  260 (645)
Q Consensus       183 --~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~wsf~  260 (645)
                        ...++.+|+.++|||+||+.+++|+|+|.... .+|..+++++.+||+.+++++||||||||||...|.|.|++|+|+
T Consensus       158 ~~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~~l~~~vdL~~~l~~~v~vGFsasTG~~~~~h~I~sW~F~  236 (236)
T PF00139_consen  158 SSPSFSLSDGKWHTVWIDYDASTKRLSVYLDDNS-SKPSSPVLSVNVDLSAVLPEQVYVGFSASTGGSYQTHDILSWSFS  236 (236)
T ss_dssp             EEEEHHHGTTSEEEEEEEEETTTTEEEEEEEETT-TTSEEEEEEEE--HHHHSCSEEEEEEEEEESSSSEEEEEEEEEEE
T ss_pred             ccccccccCCcEEEEEEEEcCCccEEEEEEeccc-CCCcceeEEEEEchHHhcCCCcEEEEEeecCCCcceEEEEEEEeC
Confidence              35568899999999999999999999999874 678899999999999999999999999999999999999999995

Leguminous plant lectins resemble each other in their physicochemical properties although they differ in their carbohydrate specificities. They consist of two or four subunits with relative molecular mass of 30 kDa and each subunit has one carbohydrate-binding site. The interaction with sugars requires tightly bound calcium and manganese ions. The structural similarities of these lectins are reported by the primary structural analyses and X-ray crystallographic studies. X-ray studies have shown that the folding of the polypeptide chains in the region of the carbohydrate-binding sites is also similar, despite differences in the primary sequences. The carbohydrate-binding sites of these lectins consist of two conserved amino acids on beta pleated sheets. One of these loops contains transition metals, calcium and manganese, which keep the amino acid residues of the sugar-binding site at the required positions. Amino acid sequences of this loop play an important role in the carbohydrate-binding specificities of these lectins. These lectins bind either glucose/mannose or galactose. The exact function of legume lectins is not known but they may be involved in the attachment of nitrogen-fixing bacteria to legumes and in the protection against pathogens. Some legume lectins are proteolytically processed to produce two chains, beta (which corresponds to the N-terminal) and alpha (C-terminal) (IPR000985 from INTERPRO). The lectin concanavalin A (conA) from jack bean is exceptional in that the two chains are transposed and ligated (by formation of a new peptide bond). The N terminus of mature conA thus corresponds to that of the alpha chain and the C terminus to the beta chain.; GO: 0005488 binding; PDB: 1VLN_B 2GDF_C 2JE9_C 2JEC_C 1DGL_B 2P37_B 2CWM_A 2P34_D 2OW4_A 3IPV_B ....

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-46  Score=391.05  Aligned_cols=250  Identities=37%  Similarity=0.549  Sum_probs=207.0

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeE-EEEEEeccCCh--hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC-eEEEEEE
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSY-IAVKRVSQGSK--QGIKEYASEVKIISRLRHRNLVQLLGWCHEKK-ELLLVYE  429 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~-vavK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~-~~~lV~E  429 (645)
                      +...+.||+|+||+||+|.+++  +. ||||++.....  ...++|.+|+.+|.+++|||||+++|.|.+.. .+++|||
T Consensus        43 l~~~~~iG~G~~g~V~~~~~~g--~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtE  120 (362)
T KOG0192|consen   43 LPIEEVLGSGSFGTVYKGKWRG--TDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTE  120 (362)
T ss_pred             hhhhhhcccCCceeEEEEEeCC--ceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEE
Confidence            3445669999999999999984  44 99999976432  23679999999999999999999999999887 7999999


Q ss_pred             ecCCCChhhhhhh-cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCC-eeeccCCCCCeEECCCC-cEEEeeccCccccccc
Q 042831          430 FMPNGSLDSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQC-VVHRDIKSSNIMLDSNF-NAKIGDFGLARLVEHA  506 (645)
Q Consensus       430 y~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivH~Dlkp~NILld~~~-~~kl~DfGla~~~~~~  506 (645)
                      ||++|+|..+++. .+..+++..+++|+.|||+||.|||+   .+ ||||||||+|||++.++ ++||+|||+++.....
T Consensus       121 y~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~  197 (362)
T KOG0192|consen  121 YMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS  197 (362)
T ss_pred             eCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence            9999999999988 47899999999999999999999999   66 99999999999999997 9999999999865432


Q ss_pred             CCcceeecccCccccCccccc--cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          507 KGSQTTVLAGTMGYMAPECAT--TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~--~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      . ...+...||..|||||++.  ...++.|+||||||++||||+||+.||......      +.......++.       
T Consensus       198 ~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~------~~~~~v~~~~~-------  263 (362)
T KOG0192|consen  198 K-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV------QVASAVVVGGL-------  263 (362)
T ss_pred             c-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhcCC-------
Confidence            2 2333468999999999999  568999999999999999999999999865541      11111111111       


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        +...+......+..++.+||+.||++||++.+++..|.
T Consensus       264 --Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~  301 (362)
T KOG0192|consen  264 --RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLE  301 (362)
T ss_pred             --CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHH
Confidence              12222224456777778899999999999999999998

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-46  Score=373.65  Aligned_cols=253  Identities=30%  Similarity=0.410  Sum_probs=215.3

Q ss_pred             CCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC-eEEEEEEecCC
Q 042831          356 DDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK-ELLLVYEFMPN  433 (645)
Q Consensus       356 ~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~-~~~lV~Ey~~~  433 (645)
                      ..+.||+|..|+|||++++.+++.+|+|.+... .....+++.+|++++.+.+||+||.++|.|...+ +..|+||||++
T Consensus        83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDg  162 (364)
T KOG0581|consen   83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDG  162 (364)
T ss_pred             hhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCC
Confidence            367899999999999999999999999999654 4456789999999999999999999999999988 59999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |||++.+... +.+++...-+|+.+|++||.|||++  ++||||||||+|||++.+|++||||||.++.+...   ....
T Consensus       163 GSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---~a~t  236 (364)
T KOG0581|consen  163 GSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---IANT  236 (364)
T ss_pred             CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhh---hccc
Confidence            9999988644 5699999999999999999999973  89999999999999999999999999999876543   5566


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC--CCchhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAP--QGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~--~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      .+||..|||||.+.+..|+.++||||||+.++|+++|+-|+....+  .....+++++-    .+     -.|++...  
T Consensus       237 fvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv----~~-----ppP~lP~~--  305 (364)
T KOG0581|consen  237 FVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV----DE-----PPPRLPEG--  305 (364)
T ss_pred             ccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh----cC-----CCCCCCcc--
Confidence            8899999999999999999999999999999999999999986422  22333333321    11     12333222  


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          592 GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                       ....++..++..||++||.+||+++|+++|.+..
T Consensus       306 -~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~  339 (364)
T KOG0581|consen  306 -EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIK  339 (364)
T ss_pred             -cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHh
Confidence             2446788889999999999999999999999853

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5e-45  Score=385.21  Aligned_cols=252  Identities=29%  Similarity=0.439  Sum_probs=215.2

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ..|...+.||+|||..||.+++..+|+.||+|++.+.   .....+...+|+++.++|+|||||+++++|++.+..|||.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            5688899999999999999999999999999999763   3445678889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |+|++++|..++. ..+.+++...+.++.||+.||.|||+   .+|+|||||..|+||+++.++||+|||||..+.... 
T Consensus        98 ELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~-  172 (592)
T KOG0575|consen   98 ELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG-  172 (592)
T ss_pred             EecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeecCcc-
Confidence            9999999998886 67789999999999999999999999   899999999999999999999999999998876433 


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ......+||+.|+|||++.....+..+||||+||+||-|++|++||+...-.+       ....+   +..+..-|.   
T Consensus       173 Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke-------ty~~I---k~~~Y~~P~---  239 (592)
T KOG0575|consen  173 ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE-------TYNKI---KLNEYSMPS---  239 (592)
T ss_pred             cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH-------HHHHH---HhcCccccc---
Confidence            34455789999999999999999999999999999999999999998543111       11111   111111121   


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                          .......+|+..+|++||.+|||+++|+.+-.+
T Consensus       240 ----~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff  272 (592)
T KOG0575|consen  240 ----HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF  272 (592)
T ss_pred             ----ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence                223345677889999999999999999999987

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-45  Score=367.12  Aligned_cols=203  Identities=31%  Similarity=0.556  Sum_probs=184.9

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ..+|...++||+|.|+.||+|+++.++..||||.+...  .++..+.+..|+++|++++|||||++++++..++.++|||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            35788888999999999999999999999999999766  6667778899999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC------CcEEEeeccCccc
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN------FNAKIGDFGLARL  502 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~------~~~kl~DfGla~~  502 (645)
                      |||.+|+|..+++.. +.+++...+.++.|||.||++||+   ++||||||||.||||+.+      -.+||+|||+|+.
T Consensus        89 EyC~gGDLs~yi~~~-~~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~  164 (429)
T KOG0595|consen   89 EYCNGGDLSDYIRRR-GRLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF  164 (429)
T ss_pred             EeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence            999999999999654 479999999999999999999999   999999999999999764      4589999999998


Q ss_pred             ccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAP  559 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~  559 (645)
                      +..  .......+|++-|||||+++.++|+.|+|+||.|++|||+++|+.||+....
T Consensus       165 L~~--~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~  219 (429)
T KOG0595|consen  165 LQP--GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP  219 (429)
T ss_pred             CCc--hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence            763  3344567899999999999999999999999999999999999999986554

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.9e-45  Score=370.62  Aligned_cols=257  Identities=25%  Similarity=0.382  Sum_probs=212.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-------hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-------QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-------~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~  424 (645)
                      +.|...+.||+|+||.|-+|..+.+|+.||||++++...       .......+|+++|++|+|||||++++++...+..
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~  251 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS  251 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence            456678999999999999999999999999999975411       1233457999999999999999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC---CcEEEeeccCcc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN---FNAKIGDFGLAR  501 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~---~~~kl~DfGla~  501 (645)
                      |||||||++|.|.+.+..+ +.+.+..-..+++|++.|+.|||+   +||+||||||+|||+..+   ..+||+|||+|+
T Consensus       252 YmVlE~v~GGeLfd~vv~n-k~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK  327 (475)
T KOG0615|consen  252 YMVLEYVEGGELFDKVVAN-KYLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDFGLAK  327 (475)
T ss_pred             EEEEEEecCccHHHHHHhc-cccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEecccchhh
Confidence            9999999999999998654 456777778899999999999999   999999999999999655   789999999999


Q ss_pred             cccccCCcceeecccCccccCccccccCC---CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcc
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTGK---ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL  578 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l  578 (645)
                      ...  ....+..++||+.|.|||++.++.   +..+.|+||+||+||-++||.+||.....+.  .    +.+.+..|+.
T Consensus       328 ~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--s----l~eQI~~G~y  399 (475)
T KOG0615|consen  328 VSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--S----LKEQILKGRY  399 (475)
T ss_pred             ccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--c----HHHHHhcCcc
Confidence            765  445667789999999999997764   3458899999999999999999998654431  1    2233334433


Q ss_pred             ccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          579 LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       579 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..      .+....+..++.+.++.++|..||+.|||+.|+|+|.|+.
T Consensus       400 ~f------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~  441 (475)
T KOG0615|consen  400 AF------GPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFK  441 (475)
T ss_pred             cc------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence            21      1122334567888999999999999999999999999986

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=9.8e-45  Score=379.58  Aligned_cols=249  Identities=33%  Similarity=0.538  Sum_probs=208.6

Q ss_pred             CCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCC
Q 042831          356 DDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS  435 (645)
Q Consensus       356 ~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gs  435 (645)
                      ..+.||+|.||.||.|.+++ ...||+|.++.. ....+.|.+|+++|.+|+|+|||+++|+|..++.++||||||++|+
T Consensus       210 l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~Gs  287 (468)
T KOG0197|consen  210 LIRELGSGQFGEVWLGKWNG-STKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGS  287 (468)
T ss_pred             HHHHhcCCccceEEEEEEcC-CCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCc
Confidence            36889999999999999986 357999998765 3345789999999999999999999999999999999999999999


Q ss_pred             hhhhhhh-cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeec
Q 042831          436 LDSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL  514 (645)
Q Consensus       436 L~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~  514 (645)
                      |.++|.. .+..+...+.+.++.|||+||+||++   +++|||||.++|||++++..+||+|||||+......+......
T Consensus       288 Ll~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~  364 (468)
T KOG0197|consen  288 LLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGG  364 (468)
T ss_pred             HHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCC
Confidence            9999986 56789999999999999999999999   9999999999999999999999999999996554443333333


Q ss_pred             ccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          515 AGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       515 ~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      .-...|.|||.+..+.++.|||||||||+||||+| |+.|+......+       +.+.+.+|..+.  .|..|      
T Consensus       365 kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e-------v~~~le~GyRlp--~P~~C------  429 (468)
T KOG0197|consen  365 KFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE-------VLELLERGYRLP--RPEGC------  429 (468)
T ss_pred             CCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH-------HHHHHhccCcCC--CCCCC------
Confidence            44667999999999999999999999999999999 999987654322       223333443222  23333      


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          594 QIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                       ...+.+|+..||+.+|++|||++.+...|+.
T Consensus       430 -P~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~  460 (468)
T KOG0197|consen  430 -PDEVYELMKSCWHEDPEDRPTFETLREVLED  460 (468)
T ss_pred             -CHHHHHHHHHHhhCCcccCCCHHHHHHHHHH
Confidence             3467778899999999999999998888763

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.7e-45  Score=350.91  Aligned_cols=258  Identities=27%  Similarity=0.391  Sum_probs=213.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEee-eeeCCe-EEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGW-CHEKKE-LLLV  427 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~-~~~~~~-~~lV  427 (645)
                      .+|.+.++||+|.||+|||+....+|..+|.|.+...  +.+..++...|+.+|++|+|||||+++++ +.++++ +.||
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            3567788999999999999999999999999998754  45667889999999999999999999995 445555 8999


Q ss_pred             EEecCCCChhhhhh---hcCCCCCHHHHHHHHHHHHHHHHHHHhhcCC-CeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          428 YEFMPNGSLDSHLF---KENSLLTWEFRYKIAQDLASGLLYLQEEWEQ-CVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      ||||..|+|...++   +.++.+++..+++++.|++.||..+|..+.+ -|+||||||.||+|+.+|.+||+|||+++.+
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            99999999998875   3567899999999999999999999996644 3889999999999999999999999999988


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      +... ......+||+.||+||.+...+|+.+|||||+||++|||+.-+.||...+      +. .....+.+|.....  
T Consensus       179 ~s~~-tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n------~~-~L~~KI~qgd~~~~--  248 (375)
T KOG0591|consen  179 SSKT-TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN------LL-SLCKKIEQGDYPPL--  248 (375)
T ss_pred             cchh-HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc------HH-HHHHHHHcCCCCCC--
Confidence            6533 33456789999999999999999999999999999999999999998642      22 12233344432111  


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                            .+......+..|+..|+.+||+.||+.-.+++.+..
T Consensus       249 ------p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  249 ------PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             ------cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence                  123456778889999999999999996666655543

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.3e-43  Score=361.84  Aligned_cols=278  Identities=28%  Similarity=0.385  Sum_probs=224.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC--CeEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KELLLV  427 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~--~~~~lV  427 (645)
                      +.|+.+++||+|.||.||+|++..+|+.||+|+++.+.  .....-..+||.+|++|+||||++|.+...+.  +.+|||
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            34666788999999999999999999999999998764  44456677999999999999999999998776  689999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      +|||+. +|.-++...+-.+++.++..+++||++||.|||.   ++|+|||||.+|||||.+|.+||+|||||+++....
T Consensus       197 FeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~  272 (560)
T KOG0600|consen  197 FEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG  272 (560)
T ss_pred             Eecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence            999965 7777787777789999999999999999999999   999999999999999999999999999999888777


Q ss_pred             CcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC--------Ccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN--------GKL  578 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~--------~~l  578 (645)
                      ....+..+-|.+|.|||.+.+. .|+.+.|+||.||||.||+.|++.|....+-++   +..++.+.+.        .++
T Consensus       273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQ---l~kIfklcGSP~e~~W~~~kL  349 (560)
T KOG0600|consen  273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQ---LHKIFKLCGSPTEDYWPVSKL  349 (560)
T ss_pred             CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHH---HHHHHHHhCCCChhccccccC
Confidence            7777788899999999998875 599999999999999999999999987665444   3334433321        111


Q ss_pred             c--cccCccccCCCCH-------HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc-CCCCCCCCCCCCC
Q 042831          579 L--EAVDPRLCRDFDG-------QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF-EAPLPALPPKMPV  638 (645)
Q Consensus       579 ~--~~~d~~l~~~~~~-------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~-~~~~p~~p~~~p~  638 (645)
                      .  ..+.+.  ..+..       ......+.|+..+|..||.+|.|+.++|+.-.| ..|+|.-|+..|.
T Consensus       350 P~~~~~kp~--~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~~~p~~Lp~  417 (560)
T KOG0600|consen  350 PHATIFKPQ--QPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLPCDPSSLPK  417 (560)
T ss_pred             CcccccCCC--CcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCCCCCcccCCC
Confidence            1  111111  11111       112446677788889999999999999999988 4566655555443

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-43  Score=354.50  Aligned_cols=256  Identities=25%  Similarity=0.366  Sum_probs=213.3

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ..++|+..+.||+|+||+||.++.+++++.+|+|++++.   .....+...+|..+|.+++||.||+++-.|++.+.+||
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence            356899999999999999999999999999999999764   34456788899999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      |+||+.||.|..+|.+ .+.+++...+-.+..|+.||.|||+   ++||||||||+|||||++|+++|+|||+++.... 
T Consensus       103 Vld~~~GGeLf~hL~~-eg~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~-  177 (357)
T KOG0598|consen  103 VLDYLNGGELFYHLQR-EGRFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK-  177 (357)
T ss_pred             EEeccCCccHHHHHHh-cCCcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhccc-
Confidence            9999999999999954 4568888888889999999999999   9999999999999999999999999999985433 


Q ss_pred             CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                      .+..+...+||+.|||||++.+..++..+|.||+|+++|||++|.+||...+..      . ..+.+.++++.       
T Consensus       178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~------~-~~~~I~~~k~~-------  243 (357)
T KOG0598|consen  178 DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK------K-MYDKILKGKLP-------  243 (357)
T ss_pred             CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH------H-HHHHHhcCcCC-------
Confidence            334555689999999999999999999999999999999999999999865432      1 12222233311       


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCC----CHHHHHHHhccC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRP----SIRQVIHVLNFE  626 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP----s~~evl~~L~~~  626 (645)
                        ..+.-.......++...++.||++|-    .++++-+|..+.
T Consensus       244 --~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~  285 (357)
T KOG0598|consen  244 --LPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFK  285 (357)
T ss_pred             --CCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccc
Confidence              11111223556777889999999994    677777777653

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=8e-43  Score=381.84  Aligned_cols=260  Identities=29%  Similarity=0.472  Sum_probs=219.6

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEcC-----CCeEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCCccEEEeeeeeC
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFRE-----TNSYIAVKRVSQGSKQ-GIKEYASEVKIISRLRHRNLVQLLGWCHEK  421 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~  421 (645)
                      +....+....+.||+|+||+||+|...+     ....||||.++..... ..++|.+|++++..++|||||+|+|.|.++
T Consensus       482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~  561 (774)
T KOG1026|consen  482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG  561 (774)
T ss_pred             EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC
Confidence            3344556668899999999999998753     3468999999877554 788999999999999999999999999999


Q ss_pred             CeEEEEEEecCCCChhhhhhhc---------CC----CCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC
Q 042831          422 KELLLVYEFMPNGSLDSHLFKE---------NS----LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS  488 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~---------~~----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~  488 (645)
                      +.+++|+|||..|+|.++|...         +.    .|+..+.+.|+.|||.||.||-+   +.+|||||..+|+|+.+
T Consensus       562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge  638 (774)
T KOG1026|consen  562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGE  638 (774)
T ss_pred             CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---Ccccccchhhhhceecc
Confidence            9999999999999999999632         12    38899999999999999999998   89999999999999999


Q ss_pred             CCcEEEeeccCcccccccCCccee-ecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHH
Q 042831          489 NFNAKIGDFGLARLVEHAKGSQTT-VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLL  566 (645)
Q Consensus       489 ~~~~kl~DfGla~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~  566 (645)
                      +..+||+||||++..-..++.+.. .-.-..+||+||.+..+++|++||||||||+|||+.+ |+.|+.....+      
T Consensus       639 ~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~------  712 (774)
T KOG1026|consen  639 NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ------  712 (774)
T ss_pred             ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH------
Confidence            999999999999866555544433 2334678999999999999999999999999999999 99999866543      


Q ss_pred             HHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          567 QWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       567 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                       .|.+.+++|++...  |       .....++..|++.||+.+|++||+++||-..|+..
T Consensus       713 -EVIe~i~~g~lL~~--P-------e~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~  762 (774)
T KOG1026|consen  713 -EVIECIRAGQLLSC--P-------ENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW  762 (774)
T ss_pred             -HHHHHHHcCCcccC--C-------CCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence             34556667777543  2       22345788888999999999999999999999754

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=2.3e-43  Score=342.40  Aligned_cols=269  Identities=25%  Similarity=0.347  Sum_probs=214.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      +.|+...++|+|+||.|||+++++||+.||||++....  +.-.+-.++|+++|++++|+|+|.+++.|..+..+.||+|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            35677889999999999999999999999999986543  2334556799999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      ||+..-|. -|.....-++.+...+++.|++.|+.|+|+   +++|||||||+|||++.++.+||||||+|+.+.. .+.
T Consensus        82 ~~dhTvL~-eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pgd  156 (396)
T KOG0593|consen   82 YCDHTVLH-ELERYPNGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PGD  156 (396)
T ss_pred             ecchHHHH-HHHhccCCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcC-Ccc
Confidence            99775554 444444568889999999999999999999   8999999999999999999999999999998764 445


Q ss_pred             ceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHH--------HHHhc-CCccc
Q 042831          510 QTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWV--------WDLYG-NGKLL  579 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~--------~~~~~-~~~l~  579 (645)
                      ..+..+.|.+|.|||.+.+ -+|+...||||.||++.||++|.+.|.+..+-++..++...        .+.+. ++...
T Consensus       157 ~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~  236 (396)
T KOG0593|consen  157 NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFH  236 (396)
T ss_pred             hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCcee
Confidence            5667788999999999877 67999999999999999999999999877766655544322        11111 11111


Q ss_pred             cccCccc------cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          580 EAVDPRL------CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       580 ~~~d~~l------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ...-|..      ...++ ....-+++++..|++.||.+|++-+|++.|-.|+
T Consensus       237 Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd  288 (396)
T KOG0593|consen  237 GVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD  288 (396)
T ss_pred             eeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence            1111111      11111 2234678899999999999999999999987763

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=6.8e-42  Score=327.25  Aligned_cols=281  Identities=25%  Similarity=0.353  Sum_probs=228.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChh--hHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ--GIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .+|...++||+|.||.||+|++..+|+.||||+++.....  -.....+|++.|++++|+||+.+++.|...+.+.||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            4677789999999999999999999999999999765332  24567899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      || ..+|+..+..+...++..++..++.++++||+|||.   +.|+||||||.|+|++++|.+||+|||+|+.+......
T Consensus        82 fm-~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~  157 (318)
T KOG0659|consen   82 FM-PTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI  157 (318)
T ss_pred             ec-cccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence            99 568999998888899999999999999999999999   89999999999999999999999999999988654433


Q ss_pred             ceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC-----
Q 042831          510 QTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD-----  583 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d-----  583 (645)
                       .+..+-|.+|.|||.+.+. +|+...||||.||++.||+-|.+-|.+..+-++   +..++...+...-.++-+     
T Consensus       158 -~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQ---L~~If~~LGTP~~~~WP~~~~lp  233 (318)
T KOG0659|consen  158 -QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQ---LSKIFRALGTPTPDQWPEMTSLP  233 (318)
T ss_pred             -cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHH---HHHHHHHcCCCCcccCccccccc
Confidence             3334679999999988775 599999999999999999998887776554333   334444433221111111     


Q ss_pred             ----------ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC-CCCCCCCCCCCCCCC
Q 042831          584 ----------PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE-APLPALPPKMPVPTY  641 (645)
Q Consensus       584 ----------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~-~~~p~~p~~~p~~~~  641 (645)
                                +.+ ...-.......+++...++..||.+|+|+.|++++-.+. .|.|..|.+.|.|..
T Consensus       234 dY~~~~~~P~~~~-~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~~~lp~p~~  301 (318)
T KOG0659|consen  234 DYVKIQQFPKPPL-NNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPPSKLPIPST  301 (318)
T ss_pred             cHHHHhcCCCCcc-ccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCChhhCcCCcc
Confidence                      111 111123345568888999999999999999999999876 688888888777654

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-43  Score=358.64  Aligned_cols=272  Identities=25%  Similarity=0.316  Sum_probs=219.7

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChh-hHHHHHHHHHHHHhcC-CCCccEEEeeeeeCC-eEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ-GIKEYASEVKIISRLR-HRNLVQLLGWCHEKK-ELLL  426 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~-~~~l  426 (645)
                      ..++|...++||.|.||.||+|+..++|..||||+++..-.. ..-.=++|+..|++|+ ||||+++.+.+.+.+ .+++
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f   87 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF   87 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence            346788899999999999999999999999999998754221 2223358999999999 999999999998887 9999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||| ..+|+.++..+++.+++..+..|+.||++||+|+|.   +|+.|||+||+|||+..+..+||+|||+||.... 
T Consensus        88 VfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S-  162 (538)
T KOG0661|consen   88 VFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREVRS-  162 (538)
T ss_pred             eHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEeccccccccccc-
Confidence            99999 668999998889999999999999999999999999   9999999999999999999999999999997653 


Q ss_pred             CCcceeecccCccccCccccc-cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcc-------
Q 042831          507 KGSQTTVLAGTMGYMAPECAT-TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL-------  578 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~-~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l-------  578 (645)
                       ....+..+-|.+|+|||++. .+.|+.+.|+||+||+++|+++-++.|.+..+-++..   .+.+.++....       
T Consensus       163 -kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~---KIc~VLGtP~~~~~~eg~  238 (538)
T KOG0661|consen  163 -KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIY---KICEVLGTPDKDSWPEGY  238 (538)
T ss_pred             -CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHH---HHHHHhCCCccccchhHH
Confidence             34556678899999999864 5679999999999999999999999998766554433   22333332111       


Q ss_pred             --ccccC---ccccC----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCC
Q 042831          579 --LEAVD---PRLCR----DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLP  630 (645)
Q Consensus       579 --~~~~d---~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  630 (645)
                        ...+.   |...+    ..-.....+.++++..|+.+||.+|||+.|++++..++...+
T Consensus       239 ~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~  299 (538)
T KOG0661|consen  239 NLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRA  299 (538)
T ss_pred             HHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccccc
Confidence              11111   11111    011124567888999999999999999999999998865433

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-43  Score=380.25  Aligned_cols=268  Identities=29%  Similarity=0.478  Sum_probs=223.4

Q ss_pred             ccChHHHHHhhcCC---------CCCCccCcCCcEEEEEEEEcCCC---eEEEEEEeccC-ChhhHHHHHHHHHHHHhcC
Q 042831          341 RFPYKELALATNDF---------NDDQKLGQGGFGGVYKGFFRETN---SYIAVKRVSQG-SKQGIKEYASEVKIISRLR  407 (645)
Q Consensus       341 ~~~~~el~~~~~~f---------~~~~~LG~G~fG~Vy~g~~~~~~---~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~  407 (645)
                      .++|++...|...|         .+.+.||.|.||.||+|+++..|   ..||||.++.. .++...+|+.|+.+|.++.
T Consensus       609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd  688 (996)
T KOG0196|consen  609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD  688 (996)
T ss_pred             CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence            35666655544433         45788999999999999997544   57999999876 4567789999999999999


Q ss_pred             CCCccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC
Q 042831          408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD  487 (645)
Q Consensus       408 H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld  487 (645)
                      ||||++|.|.....+..+||.|||+||+|+.+|.++.+.+++.+...++++||.||.||.+   .++|||||.++|||++
T Consensus       689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARNILVN  765 (996)
T KOG0196|consen  689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARNILVN  765 (996)
T ss_pred             CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhheeec
Confidence            9999999999999999999999999999999999888889999999999999999999998   8999999999999999


Q ss_pred             CCCcEEEeeccCcccccccCCcceeeccc--CccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchh
Q 042831          488 SNFNAKIGDFGLARLVEHAKGSQTTVLAG--TMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVS  564 (645)
Q Consensus       488 ~~~~~kl~DfGla~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~  564 (645)
                      .|..+|++||||+|.++.......+...|  ..+|.|||.+...++|.+|||||||++|||+++ |.+||=+...++   
T Consensus       766 snLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd---  842 (996)
T KOG0196|consen  766 SNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD---  842 (996)
T ss_pred             cceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH---
Confidence            99999999999999876555333333333  468999999999999999999999999999888 999986544321   


Q ss_pred             HHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          565 LLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       565 l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                          |...         ++..++-..+.+....|.+|++.||++|-.+||.+.|++.+|+.-.
T Consensus       843 ----VIka---------Ie~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklI  892 (996)
T KOG0196|consen  843 ----VIKA---------IEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLI  892 (996)
T ss_pred             ----HHHH---------HHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence                1111         2222222233445668899999999999999999999999998643

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-42  Score=349.61  Aligned_cols=262  Identities=28%  Similarity=0.456  Sum_probs=212.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC--eEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK--ELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~--~~~lV~E  429 (645)
                      .++...+.||+|.||.||++.+..+|...|||.+........+.+.+|+.+|.+++|||||+++|......  .+++.||
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            45667889999999999999999889999999987664444677899999999999999999999754444  6999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC-CCcEEEeeccCcccccc--c
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLARLVEH--A  506 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~-~~~~kl~DfGla~~~~~--~  506 (645)
                      |+++|+|.+++.+.+..+++..+....+||++||.|||+   ++|+||||||+|||++. ++.+||+|||+++....  .
T Consensus        97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~  173 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT  173 (313)
T ss_pred             ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence            999999999998766589999999999999999999998   99999999999999999 79999999999987653  2


Q ss_pred             CCcceeecccCccccCccccccCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~-~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      .........||+.|||||++..+. ...++|||||||++.||+||+.||...     .....++.....++..     | 
T Consensus       174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~ig~~~~~-----P-  242 (313)
T KOG0198|consen  174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLLIGREDSL-----P-  242 (313)
T ss_pred             cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHHHhccCCC-----C-
Confidence            222344578999999999998643 446999999999999999999999753     1122233222222211     2 


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCC
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLP  630 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  630 (645)
                         .++........+++..|++.||++|||++++|+|..-....+
T Consensus       243 ---~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  243 ---EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             ---CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence               222223345667788999999999999999999998654333

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.1e-41  Score=354.21  Aligned_cols=258  Identities=26%  Similarity=0.403  Sum_probs=215.6

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC----Ch-hhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCC
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG----SK-QGIKEYASEVKIISRLR-HRNLVQLLGWCHEKK  422 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~----~~-~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~  422 (645)
                      ...+.|...+.||+|.||+|++|.+..++..||+|.+...    .. ...+.+.+|+.++++++ ||||+++++++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            3456888999999999999999999999999999977653    11 23456668999999999 999999999999999


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC-CcEEEeeccCcc
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN-FNAKIGDFGLAR  501 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~-~~~kl~DfGla~  501 (645)
                      ++++||||+.+|+|.+++.+ ...+.+.....+++|+++|++|||+   ++|+||||||+|||+|.+ +++||+|||++.
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~  169 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFGLSA  169 (370)
T ss_pred             eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence            99999999999999999987 6778889999999999999999999   999999999999999999 999999999998


Q ss_pred             cccccCCcceeecccCccccCccccccCC-CC-cchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccc
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTGK-AS-KESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL  579 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~t-~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~  579 (645)
                      ... .........+|++.|+|||++.+.. |+ .++||||+||+||.|++|+.||+....   ..+.    ..+..+...
T Consensus       170 ~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~---~~l~----~ki~~~~~~  241 (370)
T KOG0583|consen  170 ISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV---PNLY----RKIRKGEFK  241 (370)
T ss_pred             ccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH---HHHH----HHHhcCCcc
Confidence            764 3444566678999999999999876 64 889999999999999999999986321   1111    112222110


Q ss_pred             cccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       580 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                        + |.   ...   ...+..++.+|+.+||.+|+++.+++.+.|+..
T Consensus       242 --~-p~---~~~---S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  242 --I-PS---YLL---SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             --C-CC---CcC---CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence              0 11   110   346678889999999999999999999999885

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-41  Score=349.55  Aligned_cols=256  Identities=25%  Similarity=0.357  Sum_probs=214.8

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~  425 (645)
                      ..++|..++.||+|.|++|++|+.+.+++.+|||++.+.   .....+-...|-+.|.+| .||.|++|+-.|+++..+|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            346888899999999999999999999999999998654   223345567899999999 7999999999999999999


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +|+||+++|+|.+++.+- +.+++...+.++.+|+.||+|||+   .|||||||||+|||||+++++||+|||.|+.+..
T Consensus       151 FvLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~  226 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKILSP  226 (604)
T ss_pred             EEEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence            999999999999999654 578999999999999999999999   9999999999999999999999999999998753


Q ss_pred             cCCc------------ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHh
Q 042831          506 AKGS------------QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY  573 (645)
Q Consensus       506 ~~~~------------~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~  573 (645)
                      ....            ....++||..|.+||++..+..+..+|+|+|||+||+|+.|++||...++-   .+.+.+..  
T Consensus       227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney---liFqkI~~--  301 (604)
T KOG0592|consen  227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY---LIFQKIQA--  301 (604)
T ss_pred             hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH---HHHHHHHH--
Confidence            2211            114589999999999999999999999999999999999999999865421   12222211  


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                              ++-.+...++    +.+.+|+.+.|..||.+|+|.+|+.+|.-|+
T Consensus       302 --------l~y~fp~~fp----~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~  342 (604)
T KOG0592|consen  302 --------LDYEFPEGFP----EDARDLIKKLLVRDPSDRLTSQQIKAHPFFE  342 (604)
T ss_pred             --------hcccCCCCCC----HHHHHHHHHHHccCccccccHHHHhhCcccc
Confidence                    1222333333    4566777888999999999999999999875

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=5.7e-40  Score=394.34  Aligned_cols=268  Identities=25%  Similarity=0.448  Sum_probs=221.8

Q ss_pred             cChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC
Q 042831          342 FPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK  421 (645)
Q Consensus       342 ~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~  421 (645)
                      +.++++.   ..|...+.||+|+||.||+|+...++..||||++......    ...|++.+++++||||++++|+|.+.
T Consensus       683 ~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~  755 (968)
T PLN00113        683 ITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSE  755 (968)
T ss_pred             hhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcC
Confidence            4444443   4577888999999999999999888999999998644322    13468899999999999999999999


Q ss_pred             CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          422 KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      +..++|||||++|+|.+++.    .++|..+.+|+.|+|+||+|||+.+.++|+||||||+||+++.++..++. ||...
T Consensus       756 ~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~  830 (968)
T PLN00113        756 KGAYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPG  830 (968)
T ss_pred             CCCEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccc
Confidence            99999999999999999984    38999999999999999999997667899999999999999999988876 66554


Q ss_pred             cccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA  581 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~  581 (645)
                      .....     ....++..|+|||++.+..++.++|||||||++|||++|+.||..... ....+.+|+...+........
T Consensus       831 ~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~  904 (968)
T PLN00113        831 LLCTD-----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCHLDMW  904 (968)
T ss_pred             ccccC-----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccchhhe
Confidence            32211     123578999999999999999999999999999999999999964332 334567777766666666677


Q ss_pred             cCccccC--CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          582 VDPRLCR--DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       582 ~d~~l~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      +|+.+..  ..+.+++.++++++.+|++.||++||+|+||++.|+...
T Consensus       905 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~  952 (968)
T PLN00113        905 IDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESAS  952 (968)
T ss_pred             eCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhh
Confidence            7877644  345577888999999999999999999999999998653

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-41  Score=354.30  Aligned_cols=267  Identities=27%  Similarity=0.451  Sum_probs=216.5

Q ss_pred             ccChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeee
Q 042831          341 RFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWC  418 (645)
Q Consensus       341 ~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~  418 (645)
                      +.+.++++...+++...+.||+|.||+||+|++.+   .||||.+...  ..+..+.|.+|+..+++-||.||+-+.|||
T Consensus       381 s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~  457 (678)
T KOG0193|consen  381 SDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGAC  457 (678)
T ss_pred             CccccccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhh
Confidence            34456777777888889999999999999999975   4999998754  556788999999999999999999999999


Q ss_pred             eeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeecc
Q 042831          419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG  498 (645)
Q Consensus       419 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfG  498 (645)
                      ..... .||..+|++.+|+.+++..+..++..+.+.|++|||+|+.|||.   ++|||||||..||+|.+++.+||+|||
T Consensus       458 ~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFG  533 (678)
T KOG0193|consen  458 MNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFG  533 (678)
T ss_pred             cCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEeccc
Confidence            98887 99999999999999999888889999999999999999999999   999999999999999999999999999


Q ss_pred             Cccccccc-CCcceeecccCccccCccccccC---CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc
Q 042831          499 LARLVEHA-KGSQTTVLAGTMGYMAPECATTG---KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG  574 (645)
Q Consensus       499 la~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~---~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~  574 (645)
                      ++..-..- .........|...|||||+++..   ++++.+||||||+++|||+||..||.....+...      | +.+
T Consensus       534 Latvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIi------f-mVG  606 (678)
T KOG0193|consen  534 LATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQII------F-MVG  606 (678)
T ss_pred             ceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheE------E-Eec
Confidence            98643322 12223335578889999998754   5899999999999999999999999843332111      1 122


Q ss_pred             CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          575 NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       575 ~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .|.+.  .|....   .....+.|.+|...||..++++||.+.+++..|+.-
T Consensus       607 rG~l~--pd~s~~---~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l  653 (678)
T KOG0193|consen  607 RGYLM--PDLSKI---RSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEEL  653 (678)
T ss_pred             ccccC--ccchhh---hccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHh
Confidence            33222  121111   112335666777899999999999999999977754

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-40  Score=336.39  Aligned_cols=267  Identities=25%  Similarity=0.345  Sum_probs=213.6

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ..+.|+..+.||.|..+.||+|+...+++.||||++..+ .......+.+|+..|+.++||||++++..|..+..+++||
T Consensus        24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm  103 (516)
T KOG0582|consen   24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM  103 (516)
T ss_pred             CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence            356788899999999999999999999999999999755 3445789999999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          429 EFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      .||.+||+.+.+... ..-+++..+..|.+++++||.|||.   +|.||||||+.||||+++|.+||+|||..-.+....
T Consensus       104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G  180 (516)
T KOG0582|consen  104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG  180 (516)
T ss_pred             hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence            999999999998753 3458999999999999999999999   999999999999999999999999999866543322


Q ss_pred             Ccc---eeecccCccccCcccccc--CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          508 GSQ---TTVLAGTMGYMAPECATT--GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       508 ~~~---~~~~~gt~~y~aPE~~~~--~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      .+.   .....||++|||||++..  ..|+.|+||||||+...||++|..||....+-  ..+..   . + ++......
T Consensus       181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm--kvLl~---t-L-qn~pp~~~  253 (516)
T KOG0582|consen  181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM--KVLLL---T-L-QNDPPTLL  253 (516)
T ss_pred             ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH--HHHHH---H-h-cCCCCCcc
Confidence            211   144689999999999544  35999999999999999999999999854431  11111   1 1 11111000


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      -..+..+.+...-..+.+++..||+.||++|||+++++++-+|.
T Consensus       254 t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk  297 (516)
T KOG0582|consen  254 TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFK  297 (516)
T ss_pred             cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHh
Confidence            00111111112234677888999999999999999999999875

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=6.9e-41  Score=347.85  Aligned_cols=250  Identities=28%  Similarity=0.393  Sum_probs=212.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ++|...+.||+|.||.||||+.+.+.+.||+|.+.+.  .++..+.+.+|++++++++||||+.+++||+...++++|.|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            5678889999999999999999999999999999765  45567889999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+.+ +|..+|.+ .+.++++++..|+.++..||.|||+   .+|+|||+||.|||++.++.+|+||||+|+.+.. ...
T Consensus        82 ~a~g-~L~~il~~-d~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~t~  155 (808)
T KOG0597|consen   82 YAVG-DLFTILEQ-DGKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMST-NTS  155 (808)
T ss_pred             hhhh-hHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhccc-Cce
Confidence            9966 99998854 4679999999999999999999999   9999999999999999999999999999997654 233


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      ..+...||+-|||||.+.++.++..+|.||+||+|||+..|++||...      .+.+.+.....+        +..   
T Consensus       156 vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~------si~~Lv~~I~~d--------~v~---  218 (808)
T KOG0597|consen  156 VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR------SITQLVKSILKD--------PVK---  218 (808)
T ss_pred             eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH------HHHHHHHHHhcC--------CCC---
Confidence            456678999999999999999999999999999999999999999632      122222222111        111   


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .+......+..++...|.+||.+|.+..+++.|..
T Consensus       219 ~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF  253 (808)
T KOG0597|consen  219 PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPF  253 (808)
T ss_pred             CcccccHHHHHHHHHHhhcChhhcccHHHHhcChH
Confidence            11234456677788899999999999999999874

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-40  Score=349.71  Aligned_cols=254  Identities=28%  Similarity=0.426  Sum_probs=215.5

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecC
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP  432 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~  432 (645)
                      .|....+||+|+.|.||.++...+++.||||++........+-+.+|+.+|+..+|+|||++++.+..++++++|||||+
T Consensus       274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~  353 (550)
T KOG0578|consen  274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME  353 (550)
T ss_pred             hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence            46677899999999999999999999999999987766666778899999999999999999999988899999999999


Q ss_pred             CCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCccee
Q 042831          433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT  512 (645)
Q Consensus       433 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~  512 (645)
                      +|+|.+.+..  ..+++.++..|++++++||.|||.   ++|+|||||.+|||++.++++||+|||++..+..... ...
T Consensus       354 ggsLTDvVt~--~~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-KR~  427 (550)
T KOG0578|consen  354 GGSLTDVVTK--TRMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-KRS  427 (550)
T ss_pred             CCchhhhhhc--ccccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccccC-ccc
Confidence            9999998843  459999999999999999999999   9999999999999999999999999999987765443 334


Q ss_pred             ecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCH
Q 042831          513 VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDG  592 (645)
Q Consensus       513 ~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~  592 (645)
                      ..+||+.|||||++....|+++.||||||++++||+-|++||-...+-      +.++-...+|.      |.+..  ..
T Consensus       428 TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl------rAlyLIa~ng~------P~lk~--~~  493 (550)
T KOG0578|consen  428 TMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL------RALYLIATNGT------PKLKN--PE  493 (550)
T ss_pred             cccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH------HHHHHHhhcCC------CCcCC--cc
Confidence            567999999999999999999999999999999999999999764432      22222222332      22211  22


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          593 QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       593 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .....+.++..+||+.|+++||++.|+|+|....
T Consensus       494 klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~  527 (550)
T KOG0578|consen  494 KLSPELKDFLDRCLVVDVEQRASAKELLEHPFLK  527 (550)
T ss_pred             ccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhh
Confidence            2345677888999999999999999999998764

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=4.2e-40  Score=340.36  Aligned_cols=256  Identities=25%  Similarity=0.339  Sum_probs=208.0

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .|...+.||+|+||.||++.+..+++.||+|.+....   ......+.+|+.++.+++|+|++++++++.+.+..++|||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            3667889999999999999999999999999986432   2334567899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          430 FMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       430 y~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |+++|+|..++... ...+++..+..++.|++.||.|||+   .+|+||||||+|||+++++.+||+|||++......  
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--  155 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG--  155 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC--
Confidence            99999999887643 3468999999999999999999998   99999999999999999999999999999765322  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      .......|+..|+|||++.+..++.++|||||||++|||++|+.||...........   +........          .
T Consensus       156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~---~~~~~~~~~----------~  222 (285)
T cd05631         156 ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE---VDRRVKEDQ----------E  222 (285)
T ss_pred             CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH---HHHHhhccc----------c
Confidence            122345689999999999999999999999999999999999999986543221111   111111110          0


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPS-----IRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~~  626 (645)
                      .+.......+..|+..||+.||++||+     +++++++.+++
T Consensus       223 ~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~  265 (285)
T cd05631         223 EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFK  265 (285)
T ss_pred             cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhc
Confidence            111122345677889999999999997     99999998865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=3.4e-40  Score=340.95  Aligned_cols=270  Identities=22%  Similarity=0.271  Sum_probs=209.4

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ++|...+.||+|+||.||+++++.+++.||+|++...  .....+.+.+|++++.+++||||+++++++..++..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            4688899999999999999999999999999998754  23345678899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |++++++..+. .....+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++........
T Consensus        81 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~  156 (287)
T cd07848          81 YVEKNMLELLE-EMPNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNA  156 (287)
T ss_pred             cCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccc
Confidence            99988776443 444578999999999999999999998   89999999999999999999999999999876443333


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHH---------HHHhcCCcccc
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWV---------WDLYGNGKLLE  580 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~---------~~~~~~~~l~~  580 (645)
                      ......|+..|+|||++.+..++.++|||||||++|||++|+.||......+....+...         ...........
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T cd07848         157 NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHG  236 (287)
T ss_pred             cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcc
Confidence            334456899999999999888999999999999999999999999764432211111110         00011111111


Q ss_pred             ccCccccCC------CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          581 AVDPRLCRD------FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       581 ~~d~~l~~~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ...+.....      ........+.+++.+||+.||++|||++|+++|.++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         237 LRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             cccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            101111000      001123458889999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-39  Score=337.23  Aligned_cols=262  Identities=28%  Similarity=0.464  Sum_probs=214.1

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ....+.++||+|-||.|.++.... +..||||.++... +...++|.+|+++|.+++||||++++|.|..++.+|+|+||
T Consensus       538 s~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY  616 (807)
T KOG1094|consen  538 SRLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY  616 (807)
T ss_pred             hheehhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence            345668899999999999998865 6899999998764 44568999999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCC-CCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |++|+|..++..+... +....-.+|+.|||+||+||.+   .++|||||.++|+|+|.++++||+|||+++-+-.++..
T Consensus       617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy  693 (807)
T KOG1094|consen  617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY  693 (807)
T ss_pred             HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCCce
Confidence            9999999999876433 4566777899999999999999   89999999999999999999999999999855444443


Q ss_pred             ce-eecccCccccCccccccCCCCcchhHHHHHHHHHHHH--cCCCCCCCCCCCCchhHHHHHHHHhcC-CccccccCcc
Q 042831          510 QT-TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA--CGRKPINPKAPQGQVSLLQWVWDLYGN-GKLLEAVDPR  585 (645)
Q Consensus       510 ~~-~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ell--tG~~pf~~~~~~~~~~l~~~~~~~~~~-~~l~~~~d~~  585 (645)
                      .. ...+-..+|||+|.+..++++.+||||+||+.+||++  |.+.||+....++   .++-..++... +...-...|.
T Consensus       694 ~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~---vven~~~~~~~~~~~~~l~~P~  770 (807)
T KOG1094|consen  694 RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ---VVENAGEFFRDQGRQVVLSRPP  770 (807)
T ss_pred             eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH---HHHhhhhhcCCCCcceeccCCC
Confidence            32 2345578999999999999999999999999999974  5889998655432   23333333332 2222223344


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      +++       ..+.++++.||..|.++||+++++..+|..++
T Consensus       771 ~cp-------~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~  805 (807)
T KOG1094|consen  771 ACP-------QGLYELMLRCWRRESEQRPSFEQLHLFLQEDA  805 (807)
T ss_pred             cCc-------HHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence            433       46778999999999999999999999987653

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=4.5e-40  Score=348.58  Aligned_cols=258  Identities=28%  Similarity=0.404  Sum_probs=202.8

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEc-----CCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeC-
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGS-KQGIKEYASEVKIISRL-RHRNLVQLLGWCHEK-  421 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~-  421 (645)
                      ..++|...++||+|+||.||+|.+.     .++..||+|++.... ....+.+.+|+.++.++ +||||++++++|... 
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (338)
T cd05102           5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN   84 (338)
T ss_pred             chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence            4567888999999999999999752     345689999987543 33456789999999999 899999999998764 


Q ss_pred             CeEEEEEEecCCCChhhhhhhcC---------------------------------------------------------
Q 042831          422 KELLLVYEFMPNGSLDSHLFKEN---------------------------------------------------------  444 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~---------------------------------------------------------  444 (645)
                      +.+++||||+++|+|.+++....                                                         
T Consensus        85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (338)
T cd05102          85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD  164 (338)
T ss_pred             CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence            46899999999999999886421                                                         


Q ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc-ceeecccCcc
Q 042831          445 ----SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMG  519 (645)
Q Consensus       445 ----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~  519 (645)
                          ..+++..+..++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+++........ ......++..
T Consensus       165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~  241 (338)
T cd05102         165 DLWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK  241 (338)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence                247888999999999999999998   89999999999999999999999999999765322211 1222345678


Q ss_pred             ccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHH
Q 042831          520 YMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERL  598 (645)
Q Consensus       520 y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l  598 (645)
                      |+|||++.+..++.++|||||||+||||++ |+.||.......  .    ......++...     ....    .....+
T Consensus       242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~--~----~~~~~~~~~~~-----~~~~----~~~~~l  306 (338)
T cd05102         242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE--E----FCQRLKDGTRM-----RAPE----NATPEI  306 (338)
T ss_pred             ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH--H----HHHHHhcCCCC-----CCCC----CCCHHH
Confidence            999999999899999999999999999997 999997543221  1    11112222211     1111    123457


Q ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          599 MIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       599 ~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..++.+||+.||++|||+.|+++.|+.
T Consensus       307 ~~li~~cl~~dp~~RPs~~el~~~l~~  333 (338)
T cd05102         307 YRIMLACWQGDPKERPTFSALVEILGD  333 (338)
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=1.8e-39  Score=346.24  Aligned_cols=257  Identities=26%  Similarity=0.411  Sum_probs=202.9

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|+..++||+|+||.||+|++..+++.||||.+.... ....+.+.+|++++++++|+||+++++++...+.+++||||
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            34556789999999999999999889999999986543 34456789999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +++|+|....     ..++..+..++.||+.||.|||+   .+|+||||||+|||+++++.+||+|||+++...... ..
T Consensus       154 ~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~  224 (353)
T PLN00034        154 MDGGSLEGTH-----IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM-DP  224 (353)
T ss_pred             CCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceeccccc-cc
Confidence            9999986532     35677888999999999999998   899999999999999999999999999998654322 12


Q ss_pred             eeecccCccccCccccccC-----CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          511 TTVLAGTMGYMAPECATTG-----KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~-----~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      .....|+..|+|||++...     ..+.++|||||||++|||++|+.||......+...+....    ....     .+.
T Consensus       225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~----~~~~-----~~~  295 (353)
T PLN00034        225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI----CMSQ-----PPE  295 (353)
T ss_pred             ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHH----hccC-----CCC
Confidence            2345789999999987432     2456899999999999999999999743322211111110    0000     011


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCC
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLP  630 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  630 (645)
                      .    .......+.+++.+||+.||++||++.|+++|.+.....+
T Consensus       296 ~----~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~  336 (353)
T PLN00034        296 A----PATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQP  336 (353)
T ss_pred             C----CCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence            1    1122345778889999999999999999999999876543

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-41  Score=348.17  Aligned_cols=249  Identities=28%  Similarity=0.506  Sum_probs=206.0

Q ss_pred             ccChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeee
Q 042831          341 RFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE  420 (645)
Q Consensus       341 ~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~  420 (645)
                      .++++++.       +++-||+|+.|.||+|++.  ++.||||+++.-.+       .+|+-|++|+|+||+.+.|+|..
T Consensus       120 eiPFe~Is-------ELeWlGSGaQGAVF~Grl~--netVAVKKV~elkE-------TdIKHLRkLkH~NII~FkGVCtq  183 (904)
T KOG4721|consen  120 EIPFEEIS-------ELEWLGSGAQGAVFLGRLH--NETVAVKKVRELKE-------TDIKHLRKLKHPNIITFKGVCTQ  183 (904)
T ss_pred             cCCHHHhh-------hhhhhccCcccceeeeecc--CceehhHHHhhhhh-------hhHHHHHhccCcceeeEeeeecC
Confidence            35555553       4678999999999999997  68899999864332       57888999999999999999999


Q ss_pred             CCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCc
Q 042831          421 KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA  500 (645)
Q Consensus       421 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla  500 (645)
                      ...+|||||||+.|-|...|. .++.+.......+.++||.|+.|||.   ..|||||||+-|||+..+..+||+|||-+
T Consensus       184 sPcyCIiMEfCa~GqL~~VLk-a~~~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS  259 (904)
T KOG4721|consen  184 SPCYCIIMEFCAQGQLYEVLK-AGRPITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTS  259 (904)
T ss_pred             CceeEEeeeccccccHHHHHh-ccCccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccch
Confidence            999999999999999999995 45567888889999999999999999   88999999999999999999999999999


Q ss_pred             ccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc
Q 042831          501 RLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE  580 (645)
Q Consensus       501 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~  580 (645)
                      +.....  .....++||..|||||++++.+.++|.|||||||+||||+||..||.+.+...      .+|.. + ...+.
T Consensus       260 ~e~~~~--STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA------IIwGV-G-sNsL~  329 (904)
T KOG4721|consen  260 KELSDK--STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA------IIWGV-G-SNSLH  329 (904)
T ss_pred             Hhhhhh--hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe------eEEec-c-CCccc
Confidence            865432  44556899999999999999999999999999999999999999997544321      12211 1 11222


Q ss_pred             ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       581 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..-|       ....+-+..|+..||+..|..||++++++.||+-.
T Consensus       330 LpvP-------stcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  330 LPVP-------STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA  368 (904)
T ss_pred             ccCc-------ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence            2222       23345677788999999999999999999999864

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=6.5e-40  Score=341.29  Aligned_cols=260  Identities=22%  Similarity=0.332  Sum_probs=214.0

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~  424 (645)
                      ....++|+.+.+||+|+||.||+++.++||..+|+|++++.   ...+.+..++|-.+|....+|.||+|+-.|++.+.+
T Consensus       137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L  216 (550)
T KOG0605|consen  137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL  216 (550)
T ss_pred             cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence            44668999999999999999999999999999999999765   345677889999999999999999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ||||||++||++..+|. ....|++...+..+.+++-|+.-||+   .|+|||||||+|+|||..|++||+||||+.-+.
T Consensus       217 YLiMEylPGGD~mTLL~-~~~~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~  292 (550)
T KOG0605|consen  217 YLIMEYLPGGDMMTLLM-RKDTLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD  292 (550)
T ss_pred             EEEEEecCCccHHHHHH-hcCcCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccchhh
Confidence            99999999999999885 45678999999999999999999999   999999999999999999999999999986332


Q ss_pred             cc----------------------CCc-----ce-------------------eecccCccccCccccccCCCCcchhHH
Q 042831          505 HA----------------------KGS-----QT-------------------TVLAGTMGYMAPECATTGKASKESDVY  538 (645)
Q Consensus       505 ~~----------------------~~~-----~~-------------------~~~~gt~~y~aPE~~~~~~~t~~sDV~  538 (645)
                      ..                      ...     ..                   ...+|||.|||||++.+..|+..+|.|
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW  372 (550)
T KOG0605|consen  293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW  372 (550)
T ss_pred             hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence            10                      000     00                   113699999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCCCCCCCCc-hhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCC---
Q 042831          539 SFGIVALEIACGRKPINPKAPQGQ-VSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRP---  614 (645)
Q Consensus       539 SfGvll~elltG~~pf~~~~~~~~-~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---  614 (645)
                      |+||++|||+.|-+||....+.+. ..++.|...+      ...-+.        ....+..+|+.+|+. ||++|-   
T Consensus       373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l------~fP~~~--------~~s~eA~DLI~rll~-d~~~RLG~~  437 (550)
T KOG0605|consen  373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETL------KFPEEV--------DLSDEAKDLITRLLC-DPENRLGSK  437 (550)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhc------cCCCcC--------cccHHHHHHHHHHhc-CHHHhcCcc
Confidence            999999999999999997765432 2334443111      111111        112456677788888 999996   


Q ss_pred             CHHHHHHHhccC
Q 042831          615 SIRQVIHVLNFE  626 (645)
Q Consensus       615 s~~evl~~L~~~  626 (645)
                      .++||.+|.+|.
T Consensus       438 G~~EIK~HPfF~  449 (550)
T KOG0605|consen  438 GAEEIKKHPFFK  449 (550)
T ss_pred             cHHHHhcCCccc
Confidence            699999999985

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5e-40  Score=348.13  Aligned_cols=251  Identities=24%  Similarity=0.349  Sum_probs=209.3

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      -|..++.||.|+.|.|-+|++..||+.+|||++....   ......+.+|+-+|+-+.|||++++++.+.+..++|+|.|
T Consensus        13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE   92 (786)
T KOG0588|consen   13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE   92 (786)
T ss_pred             ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence            3566889999999999999999999999999997652   2234567789999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+++|-|.+++..+ +.+++....+++.||+.|+.|+|.   .+|+||||||+|+|||.++++||+|||+|-+..  .+.
T Consensus        93 yv~gGELFdylv~k-G~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~--~gk  166 (786)
T KOG0588|consen   93 YVPGGELFDYLVRK-GPLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEV--PGK  166 (786)
T ss_pred             ecCCchhHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeeccc--CCc
Confidence            99999999999765 457888888999999999999999   899999999999999999999999999997643  334


Q ss_pred             ceeecccCccccCccccccCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          510 QTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~-t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      .....+|.++|.+||++.+.+| +.++||||+||+||.|++|+.||++++   ...+...|    ..|...  +..    
T Consensus       167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN---ir~LLlKV----~~G~f~--MPs----  233 (786)
T KOG0588|consen  167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN---IRVLLLKV----QRGVFE--MPS----  233 (786)
T ss_pred             cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc---HHHHHHHH----HcCccc--CCC----
Confidence            4556789999999999999886 689999999999999999999998433   22333333    334321  111    


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..    ..+...|+.+|+..||++|.|++||++|.+-.
T Consensus       234 ~I----s~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~  267 (786)
T KOG0588|consen  234 NI----SSEAQDLLRRMLDVDPSTRITTEEILKHPFLS  267 (786)
T ss_pred             cC----CHHHHHHHHHHhccCccccccHHHHhhCchhh
Confidence            11    12445667899999999999999999999854

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=8.3e-40  Score=338.69  Aligned_cols=266  Identities=22%  Similarity=0.302  Sum_probs=206.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|...++||+|+||.||+|....+++.||+|.++... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            56888999999999999999999999999999986543 23345678999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      ++ ++|.+++...+..+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++....... .
T Consensus        85 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~-~  159 (288)
T cd07871          85 LD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK-T  159 (288)
T ss_pred             CC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc-c
Confidence            97 58998887666678999999999999999999998   9999999999999999999999999999975432221 2


Q ss_pred             eeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC------------Cc
Q 042831          511 TTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN------------GK  577 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~------------~~  577 (645)
                      .....+++.|+|||++.+ ..++.++||||+||++|||++|+.||......+.   ..........            ..
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T cd07871         160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE---LHLIFRLLGTPTEETWPGITSNEE  236 (288)
T ss_pred             ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCChHHhhccccchh
Confidence            233467899999998865 4689999999999999999999999976543222   1111111110            00


Q ss_pred             cccccCccccCCC----CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          578 LLEAVDPRLCRDF----DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       578 l~~~~d~~l~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ......+......    .........+++.+||+.||.+|||++|+++|.++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            0111111110000    00112456788999999999999999999998764

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.7e-40  Score=341.12  Aligned_cols=250  Identities=25%  Similarity=0.329  Sum_probs=207.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|+||.||+|....+++.||+|++....   ....+.+.+|++++.+++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            36888899999999999999999899999999986432   234567889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++... ..+++.....++.|++.||+|||+   ++++||||||+|||++.++.+||+|||+++.....  
T Consensus        81 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~--  154 (291)
T cd05612          81 EYVPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR--  154 (291)
T ss_pred             eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccCC--
Confidence            999999999998643 468999999999999999999998   99999999999999999999999999999765322  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                        .....|++.|+|||++.+..++.++|||||||++|||++|+.||......   .+.+    ....+..      .+..
T Consensus       155 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~---~~~~----~i~~~~~------~~~~  219 (291)
T cd05612         155 --TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF---GIYE----KILAGKL------EFPR  219 (291)
T ss_pred             --cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----HHHhCCc------CCCc
Confidence              22346899999999999888999999999999999999999999754321   1111    1111211      1111


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPS-----IRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~~  626 (645)
                      ..    ...+.+++.+||+.||.+||+     ++++++|.|+.
T Consensus       220 ~~----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~  258 (291)
T cd05612         220 HL----DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFK  258 (291)
T ss_pred             cC----CHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcccc
Confidence            11    235678889999999999995     99999999875

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.4e-39  Score=332.80  Aligned_cols=256  Identities=25%  Similarity=0.379  Sum_probs=205.6

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEc---CCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFR---ETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~---~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .++|...+.||+|+||.||+|.+.   ..+..||+|.++... ......+.+|+.++.+++||||+++++++..++..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            356788899999999999999875   346789999987653 3445678999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++|+|.+++......+++..++.++.|++.||+|||+   ++++||||||+|||++.++.+|++|||.+......
T Consensus        84 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~  160 (266)
T cd05064          84 VTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE  160 (266)
T ss_pred             EEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence            999999999999997766689999999999999999999998   89999999999999999999999999987643222


Q ss_pred             CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      .........++..|+|||.+.++.++.++|||||||++||+++ |+.||......   .....    ..++...     .
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~---~~~~~----~~~~~~~-----~  228 (266)
T cd05064         161 AIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ---DVIKA----VEDGFRL-----P  228 (266)
T ss_pred             chhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHH----HHCCCCC-----C
Confidence            1111122334678999999999999999999999999999775 99999754322   11221    1222111     1


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ...    .....+.+++..||+++|++||+++|+++.|..
T Consensus       229 ~~~----~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~  264 (266)
T cd05064         229 APR----NCPNLLHQLMLDCWQKERGERPRFSQIHSILSK  264 (266)
T ss_pred             CCC----CCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence            111    123457778899999999999999999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.4e-40  Score=346.30  Aligned_cols=259  Identities=22%  Similarity=0.323  Sum_probs=210.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|+||.||+|++..+++.||+|++....   ....+.+.+|++++.+++||||+++++++...+..++||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            36888999999999999999999999999999987542   234567889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++.. ...+++.....++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....   
T Consensus        81 e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---  153 (333)
T cd05600          81 EYVPGGDFRTLLNN-LGVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---  153 (333)
T ss_pred             eCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCccccc---
Confidence            99999999999854 3568999999999999999999998   8999999999999999999999999999975533   


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                       ......|++.|+|||++.+..++.++|||||||++|||++|+.||......+.   ...+.. + ...+.   .+.. .
T Consensus       154 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~---~~~i~~-~-~~~~~---~~~~-~  223 (333)
T cd05600         154 -YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET---WENLKY-W-KETLQ---RPVY-D  223 (333)
T ss_pred             -ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH---HHHHHh-c-ccccc---CCCC-C
Confidence             22345689999999999998999999999999999999999999975433211   111110 0 00000   0111 0


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      .........+.+++.+||+.+|++||++++++++.++..
T Consensus       224 ~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~  262 (333)
T cd05600         224 DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKE  262 (333)
T ss_pred             ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCC
Confidence            000122345677888999999999999999999998764

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-40  Score=317.15  Aligned_cols=250  Identities=26%  Similarity=0.384  Sum_probs=209.9

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|+..+.||.|+||+|.+++.+.+|..+|+|.++...   -++.+...+|..+|+.+.||.++++.+.|.+.+.++|||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            46788999999999999999999999999999997653   345567789999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||.++|.|..++.+ .+.+++...+-++.||+.||+|||+   .+|++|||||+|||||.+|.+||+|||.|+....   
T Consensus       124 eyv~GGElFS~Lrk-~~rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~---  196 (355)
T KOG0616|consen  124 EYVPGGELFSYLRK-SGRFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG---  196 (355)
T ss_pred             eccCCccHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEecC---
Confidence            99999999999954 4568999999999999999999999   9999999999999999999999999999987643   


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                       .+-..+||+.|+|||++....+..++|.|||||++|||++|.+||....+.       ...+.+.++++.   -|   .
T Consensus       197 -rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~-------~iY~KI~~~~v~---fP---~  262 (355)
T KOG0616|consen  197 -RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI-------QIYEKILEGKVK---FP---S  262 (355)
T ss_pred             -cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH-------HHHHHHHhCccc---CC---c
Confidence             356689999999999999999999999999999999999999999866541       223333344331   11   1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCC-----CCHHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLR-----PSIRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~R-----Ps~~evl~~L~~~  626 (645)
                      .++    ..+..|+...++.|-.+|     +-.++|..|.|+.
T Consensus       263 ~fs----~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~  301 (355)
T KOG0616|consen  263 YFS----SDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFK  301 (355)
T ss_pred             ccC----HHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccc
Confidence            122    234455667778888777     4567888888875

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=3.8e-39  Score=336.20  Aligned_cols=271  Identities=21%  Similarity=0.270  Sum_probs=208.4

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .++|...++||+|+||.||+|+...+++.||+|.+..... .....+.+|+.++++++||||+++++++..+...++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            4678899999999999999999998899999999875432 234567789999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |++ ++|.+++......+++..+..++.|++.||.|||+   .+|+||||||+|||+++++.+||+|||+++...... .
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~  158 (303)
T cd07869          84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-H  158 (303)
T ss_pred             CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC-c
Confidence            995 68888887666778999999999999999999998   899999999999999999999999999987543221 1


Q ss_pred             ceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCc---c-----cc
Q 042831          510 QTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK---L-----LE  580 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~---l-----~~  580 (645)
                      ......+++.|+|||++.+ ..++.++|||||||++|||++|+.||......  ......+........   .     ..
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (303)
T cd07869         159 TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI--QDQLERIFLVLGTPNEDTWPGVHSLP  236 (303)
T ss_pred             cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH--HHHHHHHHHHhCCCChhhccchhhcc
Confidence            2233567899999998865 45789999999999999999999999754321  111222211111100   0     00


Q ss_pred             ccCcc-cc--CCCCH-------HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          581 AVDPR-LC--RDFDG-------QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       581 ~~d~~-l~--~~~~~-------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      ..++. +.  .....       .....+.+++.+||+.||++|||++|+++|.++..-
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~  294 (303)
T cd07869         237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL  294 (303)
T ss_pred             ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence            00000 00  00000       012356688899999999999999999999998754

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=6.5e-39  Score=338.82  Aligned_cols=267  Identities=24%  Similarity=0.313  Sum_probs=209.9

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .++|+..+.||+|+||.||++++..++..+|+|.+.... ....+.+.+|++++.+++||||+++++++..++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            468889999999999999999999999999999987653 3445679999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+++++|.+++... ..+++..+..++.|++.||.|||+  ..+|+||||||+|||++.++.+||+|||+++.....   
T Consensus        84 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---  157 (331)
T cd06649          84 HMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---  157 (331)
T ss_pred             cCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCccccccccc---
Confidence            99999999988543 468999999999999999999997  236999999999999999999999999998755322   


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC--ccc--------
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG--KLL--------  579 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~--~l~--------  579 (645)
                      ......|+..|+|||++.+..++.++|||||||++|||++|+.||......+   +..........+  ...        
T Consensus       158 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  234 (331)
T cd06649         158 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE---LEAIFGRPVVDGEEGEPHSISPRPR  234 (331)
T ss_pred             ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHhcccccccccCCccccCcccc
Confidence            2233568999999999998899999999999999999999999996433211   111100000000  000        


Q ss_pred             -----------------------cccCccccCCC-CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          580 -----------------------EAVDPRLCRDF-DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       580 -----------------------~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                                             +.+........ .......+.+++.+||+.||++|||++|++++.+..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~  305 (331)
T cd06649         235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIK  305 (331)
T ss_pred             cccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHh
Confidence                                   00000000000 011234678899999999999999999999999875

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-39  Score=367.15  Aligned_cols=254  Identities=31%  Similarity=0.485  Sum_probs=211.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCC-----eEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETN-----SYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~-----~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      .+.+..+.||+|.||.||.|...+..     ..||||.+.+. +.+...+|.+|..+|+.++|||||+++|.|.+....+
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~  771 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL  771 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence            44556788999999999999987533     34999999776 5567889999999999999999999999999999999


Q ss_pred             EEEEecCCCChhhhhhhc------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccC
Q 042831          426 LVYEFMPNGSLDSHLFKE------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL  499 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGl  499 (645)
                      |++|||++|+|..+|.+.      ...|+....+.++.|||+|+.||++   +++|||||.++|+||++...+||+||||
T Consensus       772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGl  848 (1025)
T KOG1095|consen  772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGL  848 (1025)
T ss_pred             EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccch
Confidence            999999999999999876      5679999999999999999999999   9999999999999999999999999999


Q ss_pred             cccccccCCcceeec-ccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHH-HhcCC
Q 042831          500 ARLVEHAKGSQTTVL-AGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWD-LYGNG  576 (645)
Q Consensus       500 a~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~-~~~~~  576 (645)
                      |+.+....+...... .-...|||||.+..+.++.|+|||||||+|||++| |..||......+       +.. ..+.|
T Consensus       849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~-------v~~~~~~gg  921 (1025)
T KOG1095|consen  849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE-------VLLDVLEGG  921 (1025)
T ss_pred             hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH-------HHHHHHhCC
Confidence            994433333222222 33468999999999999999999999999999999 999998655321       222 22344


Q ss_pred             ccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       577 ~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ++   -.|..|+       +.+.+|+..||+.+|++||+++.+++.+..
T Consensus       922 RL---~~P~~CP-------~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~  960 (1025)
T KOG1095|consen  922 RL---DPPSYCP-------EKLYQLMLQCWKHDPEDRPSFRTIVEQDPA  960 (1025)
T ss_pred             cc---CCCCCCC-------hHHHHHHHHHccCChhhCccHHHHHhhhhh
Confidence            22   2344444       467789999999999999999999997763

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=1e-39  Score=344.61  Aligned_cols=250  Identities=26%  Similarity=0.397  Sum_probs=207.9

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|+||.||+|++..+++.||+|.+...   .....+.+.+|+.++.+++||||+++++++.+++..++||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            5688889999999999999999999999999998653   2234567889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++... ..+++.....++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....  
T Consensus        98 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--  171 (329)
T PTZ00263         98 EFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR--  171 (329)
T ss_pred             cCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC--
Confidence            999999999988653 468899999999999999999998   89999999999999999999999999999765322  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                        .....|++.|+|||++.+..++.++|||||||++|||++|+.||......   .    ..+...++...      +..
T Consensus       172 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~---~----~~~~i~~~~~~------~p~  236 (329)
T PTZ00263        172 --TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF---R----IYEKILAGRLK------FPN  236 (329)
T ss_pred             --cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH---H----HHHHHhcCCcC------CCC
Confidence              22357899999999999988999999999999999999999999753321   1    11122222211      111


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPS-----IRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~~  626 (645)
                      .++    ..+.+++..||+.||++||+     +++++.|.++.
T Consensus       237 ~~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~  275 (329)
T PTZ00263        237 WFD----GRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFH  275 (329)
T ss_pred             CCC----HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccC
Confidence            122    35667889999999999996     89999998874

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=4.5e-39  Score=332.45  Aligned_cols=256  Identities=20%  Similarity=0.316  Sum_probs=202.1

Q ss_pred             CccChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChh---hHHHHHHHHHHHHhcCCCCccEEEe
Q 042831          340 KRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ---GIKEYASEVKIISRLRHRNLVQLLG  416 (645)
Q Consensus       340 ~~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~---~~~~~~~Ei~~l~~l~H~nlv~l~~  416 (645)
                      +.++++++     +......||+|++|.||+|.+.  |+.||||.++.....   ..+.+.+|+.++.+++||||++++|
T Consensus        13 ~~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g   85 (283)
T PHA02988         13 KCIESDDI-----DKYTSVLIKENDQNSIYKGIFN--NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG   85 (283)
T ss_pred             eecCHHHc-----CCCCCeEEeeCCceEEEEEEEC--CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence            44555555     2233467999999999999984  789999998754322   2577889999999999999999999


Q ss_pred             eeee----CCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcE
Q 042831          417 WCHE----KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA  492 (645)
Q Consensus       417 ~~~~----~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~  492 (645)
                      ++.+    ....++||||+++|+|.+++.+. ..+++.....++.|++.||.|||+.  .+++||||||+|||+++++.+
T Consensus        86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~  162 (283)
T PHA02988         86 FIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKL  162 (283)
T ss_pred             eEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcE
Confidence            9876    35789999999999999998654 5689999999999999999999972  478899999999999999999


Q ss_pred             EEeeccCcccccccCCcceeecccCccccCcccccc--CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHH
Q 042831          493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT--GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVW  570 (645)
Q Consensus       493 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~  570 (645)
                      ||+|||+++......    ....|+..|+|||++.+  ..++.++|||||||++|||++|+.||......   .+...+ 
T Consensus       163 kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~---~~~~~i-  234 (283)
T PHA02988        163 KIICHGLEKILSSPP----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK---EIYDLI-  234 (283)
T ss_pred             EEcccchHhhhcccc----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH---HHHHHH-
Confidence            999999998653221    22457889999999876  67999999999999999999999999854321   112211 


Q ss_pred             HHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          571 DLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       571 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        ...+ .    .+.+.    ......+.+++.+||+.||++|||++|+++.|+
T Consensus       235 --~~~~-~----~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~  277 (283)
T PHA02988        235 --INKN-N----SLKLP----LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLS  277 (283)
T ss_pred             --HhcC-C----CCCCC----CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence              1111 1    11111    112345778889999999999999999999886

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.4e-39  Score=342.82  Aligned_cols=247  Identities=26%  Similarity=0.350  Sum_probs=203.5

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNG  434 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~g  434 (645)
                      +.||+|+||.||+++...+|+.||+|++...   .......+.+|+.++.+++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999999999999999998753   2334567889999999999999999999999999999999999999


Q ss_pred             ChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeec
Q 042831          435 SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL  514 (645)
Q Consensus       435 sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~  514 (645)
                      +|.+++.. ...+++.+...++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.... ........
T Consensus        81 ~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~-~~~~~~~~  155 (323)
T cd05571          81 ELFFHLSR-ERVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS-DGATMKTF  155 (323)
T ss_pred             cHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCccccc-CCCcccce
Confidence            99988854 4568999999999999999999998   8999999999999999999999999999875322 12223345


Q ss_pred             ccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHH
Q 042831          515 AGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQ  594 (645)
Q Consensus       515 ~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~  594 (645)
                      .||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+...    ...+.      ..+..    ..
T Consensus       156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~---~~~~~----~~~~~------~~~p~----~~  218 (323)
T cd05571         156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFEL----ILMEE------IRFPR----TL  218 (323)
T ss_pred             ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH---HHHHH----HHcCC------CCCCC----CC
Confidence            7999999999999999999999999999999999999999753321   11111    11111      11111    12


Q ss_pred             HHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC
Q 042831          595 IERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE  626 (645)
Q Consensus       595 ~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~  626 (645)
                      ...+.+++.+||+.||++||     ++.++++|.++.
T Consensus       219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~  255 (323)
T cd05571         219 SPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFA  255 (323)
T ss_pred             CHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcC
Confidence            34567788999999999999     899999998874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.5e-39  Score=345.84  Aligned_cols=266  Identities=21%  Similarity=0.214  Sum_probs=205.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ..+|...+.||+|+||.||++.+..+++.||+|...      ...+.+|++++++++||||+++++++......++|+|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~  164 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR  164 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence            467999999999999999999999999999999753      23467899999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +. ++|..++... ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.........
T Consensus       165 ~~-~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~  239 (391)
T PHA03212        165 YK-TDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANK  239 (391)
T ss_pred             CC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccc
Confidence            94 7888877543 468999999999999999999998   899999999999999999999999999997543322233


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc----hhHHHHHHHHhcCC----------
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ----VSLLQWVWDLYGNG----------  576 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~----~~l~~~~~~~~~~~----------  576 (645)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||........    ...+..+....+..          
T Consensus       240 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~  319 (391)
T PHA03212        240 YYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQA  319 (391)
T ss_pred             cccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhH
Confidence            3446799999999999998999999999999999999999988753321110    01111111111000          


Q ss_pred             cccc---------ccCccccCCC--CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          577 KLLE---------AVDPRLCRDF--DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       577 ~l~~---------~~d~~l~~~~--~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      .+..         ...+......  .......+..++.+||+.||++|||++|++++.++..
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~  381 (391)
T PHA03212        320 NLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD  381 (391)
T ss_pred             HHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence            0000         0000000000  0012346778899999999999999999999999864

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.1e-39  Score=320.72  Aligned_cols=272  Identities=24%  Similarity=0.303  Sum_probs=215.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChh--hHHHHHHHHHHHHhcCCCCccEEEeeeeeC--CeEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ--GIKEYASEVKIISRLRHRNLVQLLGWCHEK--KELLLV  427 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~--~~~~lV  427 (645)
                      ++|+..+.|++|.||.||+|+++.+++.||+|+++.....  ---..++||.+|.+++|||||.+..+....  +..|||
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            4688899999999999999999999999999999755321  123467899999999999999999987643  579999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      ||||+. +|...+..-...+...+...+..|+++|+.|||.   ..|+|||||++|+|+...|.+||+|||+||.+....
T Consensus       156 Me~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~  231 (419)
T KOG0663|consen  156 MEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL  231 (419)
T ss_pred             HHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence            999955 7888887666789999999999999999999999   889999999999999999999999999999886543


Q ss_pred             CcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC--ccccccC-
Q 042831          508 GSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG--KLLEAVD-  583 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~--~l~~~~d-  583 (645)
                       ...+..+-|.+|.|||.+.+. .|+++.|+||+||++.||+++++.|.+..+-++   ++.++.+.+-.  .+...++ 
T Consensus       232 -k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQ---l~~If~llGtPte~iwpg~~~  307 (419)
T KOG0663|consen  232 -KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQ---LDKIFKLLGTPSEAIWPGYSE  307 (419)
T ss_pred             -ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHH---HHHHHHHhCCCccccCCCccc
Confidence             334556779999999988775 599999999999999999999999987665443   34444443321  1111000 


Q ss_pred             --------------ccccCCCCHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC-CCCCC
Q 042831          584 --------------PRLCRDFDGQ-QIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE-APLPA  631 (645)
Q Consensus       584 --------------~~l~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~-~~~p~  631 (645)
                                    ..+.+.|... ..+.-..|....+..||.+|.|++|.|+|-+|. .|+|.
T Consensus       308 lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~  371 (419)
T KOG0663|consen  308 LPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPI  371 (419)
T ss_pred             cchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCC
Confidence                          1112222221 235556677888899999999999999999985 45543

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=1.7e-38  Score=331.27  Aligned_cols=260  Identities=27%  Similarity=0.430  Sum_probs=203.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcC----------------CCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRE----------------TNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQL  414 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~----------------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l  414 (645)
                      ++|...++||+|+||.||++.+..                ++..||+|.+... ......+|.+|++++.+++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            567888999999999999998642                3457999998764 34456789999999999999999999


Q ss_pred             EeeeeeCCeEEEEEEecCCCChhhhhhhcC------------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeee
Q 042831          415 LGWCHEKKELLLVYEFMPNGSLDSHLFKEN------------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH  476 (645)
Q Consensus       415 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH  476 (645)
                      ++++.+.+..++||||+++|+|.+++....                  ..+++..+.+++.||+.||.|||+   .+|+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~ivH  161 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVH  161 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCccc
Confidence            999999999999999999999999885321                  247889999999999999999998   89999


Q ss_pred             ccCCCCCeEECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc--CCCC
Q 042831          477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC--GRKP  553 (645)
Q Consensus       477 ~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt--G~~p  553 (645)
                      |||||+|||++.++.+||+|||+++........ ......++..|+|||++..+.++.++||||||+++|||++  +..|
T Consensus       162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p  241 (304)
T cd05096         162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP  241 (304)
T ss_pred             cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence            999999999999999999999999765432221 1122345778999999998899999999999999999986  5677


Q ss_pred             CCCCCCCCchhHHHHHHHHhcCCcc-ccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          554 INPKAPQGQVSLLQWVWDLYGNGKL-LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       554 f~~~~~~~~~~l~~~~~~~~~~~~l-~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      |......   .....+......... .....+.       .....+.+++.+||+.||++|||++||.+.|+
T Consensus       242 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         242 YGELTDE---QVIENAGEFFRDQGRQVYLFRPP-------PCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             CCcCCHH---HHHHHHHHHhhhccccccccCCC-------CCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            7654322   223333332221111 1011111       12246788899999999999999999999885

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-40  Score=336.47  Aligned_cols=252  Identities=25%  Similarity=0.388  Sum_probs=213.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ..|+..+.||+|.||.||+|.+..+++.||+|.+..+ .+....++.+|+.++.+++++||.++++.+..+..++++|||
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            4577778999999999999999999999999999765 445678899999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      |.+|++.+.|. .+..+++..+.-|++++..||.|||.   ++.+|||||+.|||+..+|.+||+|||++-.+.......
T Consensus        93 ~~gGsv~~lL~-~~~~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr  168 (467)
T KOG0201|consen   93 CGGGSVLDLLK-SGNILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR  168 (467)
T ss_pred             hcCcchhhhhc-cCCCCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeechhhcc
Confidence            99999999884 34455888888899999999999999   899999999999999999999999999997665444333


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                       ..++||+.|||||++....|+.|+||||||++.+||++|.+|+....+..-..            -+.+...|.+.+  
T Consensus       169 -~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf------------lIpk~~PP~L~~--  233 (467)
T KOG0201|consen  169 -KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF------------LIPKSAPPRLDG--  233 (467)
T ss_pred             -ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE------------eccCCCCCcccc--
Confidence             56789999999999998899999999999999999999999998665521111            112223344444  


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        .....+.+++..||+.||+.||++.++++|-.
T Consensus       234 --~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~F  265 (467)
T KOG0201|consen  234 --DFSPPFKEFVEACLDKNPEFRPSAKELLKHKF  265 (467)
T ss_pred             --ccCHHHHHHHHHHhhcCcccCcCHHHHhhhHH
Confidence              33456778889999999999999999998753

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-40  Score=348.77  Aligned_cols=259  Identities=30%  Similarity=0.424  Sum_probs=208.1

Q ss_pred             HHHhhcCCCCCCccCcCCcEEEEEEEEcCCCe---E-EEEEEecc---CChhhHHHHHHHHHHHHhcCCCCccEEEeeee
Q 042831          347 LALATNDFNDDQKLGQGGFGGVYKGFFRETNS---Y-IAVKRVSQ---GSKQGIKEYASEVKIISRLRHRNLVQLLGWCH  419 (645)
Q Consensus       347 l~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~---~-vavK~~~~---~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~  419 (645)
                      ++..-++....++||+|+||.||+|++...+.   . ||||..+.   ..+...++|.+|+++|++++|||||+++|++.
T Consensus       152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~  231 (474)
T KOG0194|consen  152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV  231 (474)
T ss_pred             cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            34444555567999999999999999875422   3 89999875   34678899999999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccC
Q 042831          420 EKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL  499 (645)
Q Consensus       420 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGl  499 (645)
                      .+..+++|||+|.||+|+++|.+....++..++..++.+.|.||+|||+   .+++||||.++|+|++.++.+||+|||+
T Consensus       232 ~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGL  308 (474)
T KOG0194|consen  232 LEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGL  308 (474)
T ss_pred             CCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCcccc
Confidence            9999999999999999999998877789999999999999999999999   9999999999999999999999999999


Q ss_pred             cccccccCCccee-ecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCc
Q 042831          500 ARLVEHAKGSQTT-VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGK  577 (645)
Q Consensus       500 a~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~  577 (645)
                      ++....  ..... ...-...|+|||.+..+.++.++|||||||++||+.+ |..||.+....   .+..++   ..++.
T Consensus       309 s~~~~~--~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~---~v~~kI---~~~~~  380 (474)
T KOG0194|consen  309 SRAGSQ--YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY---EVKAKI---VKNGY  380 (474)
T ss_pred             ccCCcc--eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH---HHHHHH---HhcCc
Confidence            875431  11111 1124578999999999999999999999999999999 88999765432   111221   01221


Q ss_pred             cccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          578 LLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       578 l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....      +...+   ..+..+...|+..+|++||+|.++.+.++.
T Consensus       381 r~~~------~~~~p---~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~  419 (474)
T KOG0194|consen  381 RMPI------PSKTP---KELAKVMKQCWKKDPEDRPTMSTIKKKLEA  419 (474)
T ss_pred             cCCC------CCCCH---HHHHHHHHHhccCChhhccCHHHHHHHHHH
Confidence            1111      11223   344455569999999999999999999974

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=8e-39  Score=325.01  Aligned_cols=252  Identities=28%  Similarity=0.482  Sum_probs=203.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|...+.||+|+||.||++.+.. +..+|+|.+... ....+++.+|++++++++||||++++++|...+..++||||+
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~   81 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM   81 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence            457778899999999999998865 567999987643 233467899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++|+|.+++......+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++..........
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~  158 (256)
T cd05114          82 ENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSS  158 (256)
T ss_pred             CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCceecc
Confidence            9999999987655678999999999999999999998   8999999999999999999999999999876533222222


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      ....++..|+|||++....++.++||||||+++|||++ |+.||......   ....++    .++..  ...+..    
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~---~~~~~i----~~~~~--~~~~~~----  225 (256)
T cd05114         159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY---EVVEMI----SRGFR--LYRPKL----  225 (256)
T ss_pred             CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHH----HCCCC--CCCCCC----
Confidence            22345668999999988889999999999999999999 89999754321   222221    11211  111111    


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                         ....+.+++.+||+++|++||++.++++.|.
T Consensus       226 ---~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         226 ---ASMTVYEVMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             ---CCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence               1246788999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=3.8e-39  Score=346.38  Aligned_cols=257  Identities=26%  Similarity=0.381  Sum_probs=203.4

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEE-----cCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFF-----RETNSYIAVKRVSQGS-KQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKE  423 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~-----~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~  423 (645)
                      .++|...++||+|+||.||+|++     .+++..||||+++... ....+.+.+|+.++..+ +||||++++++|...+.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            45688899999999999999974     3456789999986442 33456788999999999 89999999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhcC-----------------------------------------------------------
Q 042831          424 LLLVYEFMPNGSLDSHLFKEN-----------------------------------------------------------  444 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~-----------------------------------------------------------  444 (645)
                      .++||||+++|+|.+++....                                                           
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS  193 (375)
T ss_pred             ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence            999999999999998885421                                                           


Q ss_pred             ---------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          445 ---------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       445 ---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                                     ..+++..+..++.||++||.|||+   .+++||||||+|||++.++.+||+|||+++........
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  270 (375)
T cd05104         194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY  270 (375)
T ss_pred             ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence                           247889999999999999999998   89999999999999999999999999999765432211


Q ss_pred             c-eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          510 Q-TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       510 ~-~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      . .....++..|+|||.+.+..++.++|||||||++|||++ |..||......  .....+    ..++...  ..+.  
T Consensus       271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~--~~~~~~----~~~~~~~--~~~~--  340 (375)
T cd05104         271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD--SKFYKM----IKEGYRM--LSPE--  340 (375)
T ss_pred             cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch--HHHHHH----HHhCccC--CCCC--
Confidence            1 112234567999999999999999999999999999998 88998654322  112221    2222110  0111  


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                        .   ....+.+++.+||++||++||++.|+++.|+.
T Consensus       341 --~---~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         341 --C---APSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             --C---CCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence              1   12357788899999999999999999999975

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=4.9e-39  Score=339.32  Aligned_cols=247  Identities=25%  Similarity=0.355  Sum_probs=202.9

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNG  434 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~g  434 (645)
                      +.||+|+||.||++....+++.||+|++...   .......+.+|+.++++++||||+++++++..++..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999999999999999998753   2345567889999999999999999999999999999999999999


Q ss_pred             ChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeec
Q 042831          435 SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL  514 (645)
Q Consensus       435 sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~  514 (645)
                      +|..++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... .......
T Consensus        81 ~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~~  155 (328)
T cd05593          81 ELFFHLSR-ERVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AATMKTF  155 (328)
T ss_pred             CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCc-ccccccc
Confidence            99888854 3568999999999999999999998   89999999999999999999999999998753221 1222345


Q ss_pred             ccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHH
Q 042831          515 AGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQ  594 (645)
Q Consensus       515 ~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~  594 (645)
                      .||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+..    ....+.      ..+....    
T Consensus       156 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~---~~~~----~~~~~~------~~~p~~~----  218 (328)
T cd05593         156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFE----LILMED------IKFPRTL----  218 (328)
T ss_pred             cCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH---HHHH----HhccCC------ccCCCCC----
Confidence            7999999999999889999999999999999999999999754321   1111    111111      1111122    


Q ss_pred             HHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC
Q 042831          595 IERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE  626 (645)
Q Consensus       595 ~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~  626 (645)
                      ...+.+++.+||+.||++||     ++.|++++.++.
T Consensus       219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~  255 (328)
T cd05593         219 SADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFT  255 (328)
T ss_pred             CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcC
Confidence            23567788999999999997     899999998864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=9.7e-39  Score=325.89  Aligned_cols=253  Identities=26%  Similarity=0.433  Sum_probs=206.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      .+|...++||+|++|.||+|.+..+++.||+|.+... ....+++.+|++++.+++|+|+++++++|..++..++||||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            4577788999999999999999988999999998654 334578899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          432 PNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       432 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      ++++|.+++... ...+++..++.++.|+++||.|||+   .+++||||||+||++++++.+||+|||+++.........
T Consensus        85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~  161 (263)
T cd05052          85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  161 (263)
T ss_pred             CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccceeec
Confidence            999999998654 3568999999999999999999998   899999999999999999999999999998654332222


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      .....++..|+|||.+.+..++.++|||||||++|||++ |+.||......   .    .+.....+.     .+..   
T Consensus       162 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~---~----~~~~~~~~~-----~~~~---  226 (263)
T cd05052         162 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---Q----VYELLEKGY-----RMER---  226 (263)
T ss_pred             cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---H----HHHHHHCCC-----CCCC---
Confidence            222334568999999998899999999999999999998 99998753321   1    122221111     1111   


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                       +......+.+++.+|++.+|++||++.++++.|+
T Consensus       227 -~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~  260 (263)
T cd05052         227 -PEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFE  260 (263)
T ss_pred             -CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence             1112346778889999999999999999999886

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=5.4e-39  Score=338.29  Aligned_cols=247  Identities=28%  Similarity=0.375  Sum_probs=202.2

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNG  434 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~g  434 (645)
                      +.||+|+||.||++....+|+.||+|.+...   .......+.+|++++.+++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            4699999999999999999999999998753   2344567788999999999999999999999999999999999999


Q ss_pred             ChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeec
Q 042831          435 SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL  514 (645)
Q Consensus       435 sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~  514 (645)
                      +|..++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... .......
T Consensus        81 ~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~~~~~  155 (323)
T cd05595          81 ELFFHLSR-ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTF  155 (323)
T ss_pred             cHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCC-CCccccc
Confidence            99888754 3468999999999999999999998   89999999999999999999999999998753221 1222345


Q ss_pred             ccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHH
Q 042831          515 AGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQ  594 (645)
Q Consensus       515 ~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~  594 (645)
                      .|++.|+|||++.++.++.++|||||||++|||++|+.||......   ....    ....+..      .+...+    
T Consensus       156 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~---~~~~----~~~~~~~------~~p~~~----  218 (323)
T cd05595         156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLFE----LILMEEI------RFPRTL----  218 (323)
T ss_pred             cCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH---HHHH----HHhcCCC------CCCCCC----
Confidence            6899999999999999999999999999999999999999754322   1111    1111111      111122    


Q ss_pred             HHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC
Q 042831          595 IERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE  626 (645)
Q Consensus       595 ~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~  626 (645)
                      ...+.+++.+||+.||++||     ++++++++.++.
T Consensus       219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~  255 (323)
T cd05595         219 SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL  255 (323)
T ss_pred             CHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcC
Confidence            24566788899999999998     999999998775

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1.7e-38  Score=327.56  Aligned_cols=251  Identities=24%  Similarity=0.339  Sum_probs=202.9

Q ss_pred             cCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCCh
Q 042831          360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL  436 (645)
Q Consensus       360 LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL  436 (645)
                      ||+|+||+||++.+..+++.+|+|.+....   ....+.+..|++++++++|+|++++.+++..++..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            799999999999999999999999986532   23345678899999999999999999999999999999999999999


Q ss_pred             hhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          437 DSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       437 ~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      ..++..   .+..+++..++.++.||+.||.|||+   .+|+||||||+||+++.++.+||+|||++........ ....
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~  156 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKG  156 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccc
Confidence            887753   34578999999999999999999998   8999999999999999999999999999976543222 2334


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..|++.|+|||.+.+..++.++|||||||++|||++|+.||.........   .........+.        .  .++..
T Consensus       157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~--------~--~~~~~  223 (280)
T cd05608         157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN---KELKQRILNDS--------V--TYPDK  223 (280)
T ss_pred             cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH---HHHHHhhcccC--------C--CCccc
Confidence            56899999999999999999999999999999999999999754322111   00111110110        0  11112


Q ss_pred             HHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccCC
Q 042831          594 QIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFEA  627 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~~  627 (645)
                      ....+.+++..||+.||++||     +++++++|.++..
T Consensus       224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~  262 (280)
T cd05608         224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD  262 (280)
T ss_pred             CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence            334567888999999999999     8899999988764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-38  Score=329.30  Aligned_cols=257  Identities=25%  Similarity=0.338  Sum_probs=209.0

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      +|+..++||+|+||.||++....+++.||+|++....   ......+.+|+.++++++|||++++++++..++..++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            4677889999999999999998889999999986532   2234567889999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          430 FMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       430 y~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |+++|+|.+++... ...+++..+..++.|++.||.|||+   .+++||||||+||++++++.++|+|||++....... 
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-  156 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE-  156 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence            99999999888654 3568999999999999999999998   899999999999999999999999999997654222 


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                       ......|+..|+|||++.+..++.++|||||||++|||++|+.||.........   ..+......+          ..
T Consensus       157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~---~~~~~~~~~~----------~~  222 (285)
T cd05605         157 -TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR---EEVERRVKED----------QE  222 (285)
T ss_pred             -ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH---HHHHHHhhhc----------cc
Confidence             223346899999999999888999999999999999999999999854432111   1111111111          01


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccCC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFEA  627 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~~  627 (645)
                      .+.......+.+++..|++.||++||     ++++++++.++..
T Consensus       223 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05605         223 EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT  266 (285)
T ss_pred             ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence            11222334677889999999999999     8999999998763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=8.6e-39  Score=330.96  Aligned_cols=265  Identities=25%  Similarity=0.318  Sum_probs=199.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcC-CCeEEEEEEeccCC--hhhHHHHHHHHHHHHhc---CCCCccEEEeeee-----e
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRE-TNSYIAVKRVSQGS--KQGIKEYASEVKIISRL---RHRNLVQLLGWCH-----E  420 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l---~H~nlv~l~~~~~-----~  420 (645)
                      ++|...+.||+|+||.||+|.+.. ++..||+|.++...  ......+.+|+.++.++   +||||++++++|.     .
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            368889999999999999999854 46889999886432  22334566777777766   6999999999985     2


Q ss_pred             CCeEEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccC
Q 042831          421 KKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL  499 (645)
Q Consensus       421 ~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGl  499 (645)
                      ....++||||++ ++|.+++... ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Dfg~  156 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGL  156 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence            456899999996 6898888653 3568999999999999999999998   8999999999999999999999999999


Q ss_pred             cccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC---
Q 042831          500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG---  576 (645)
Q Consensus       500 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~---  576 (645)
                      ++.....  .......|+..|+|||.+.+..++.++|||||||++|||++|+.||......+   ....+.+.....   
T Consensus       157 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~---~~~~i~~~~~~~~~~  231 (290)
T cd07862         157 ARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGEE  231 (290)
T ss_pred             eEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH---HHHHHHHHhCCCChh
Confidence            9765432  22334568999999999988889999999999999999999999998654321   222222111100   


Q ss_pred             ccc-------cccCccccC---CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          577 KLL-------EAVDPRLCR---DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       577 ~l~-------~~~d~~l~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ...       ....+.-..   .........+.+++.+|++.||++|||+.|+++|.++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         232 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             hchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence            000       000000000   0000112456688999999999999999999988764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=3.3e-38  Score=333.75  Aligned_cols=267  Identities=24%  Similarity=0.344  Sum_probs=209.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .++|+..++||+|+||.||++.+..++..+|+|.+... .......+.+|++++.+++|+||++++++|..++..++|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            46899999999999999999999989999999988765 33445678999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+++|+|.+++... ..+++.....++.|++.||.|||+  ..+++||||||+|||++.++.+||+|||++......   
T Consensus        84 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---  157 (333)
T cd06650          84 HMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---  157 (333)
T ss_pred             cCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh---
Confidence            99999999998643 458899999999999999999997  247999999999999999999999999998754322   


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc--------
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA--------  581 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~--------  581 (645)
                      ......|+..|+|||++.+..++.++|||||||++|||++|+.||........    .........+.....        
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  233 (333)
T cd06650         158 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKEL----ELMFGCPVEGDPAESETSPRPRP  233 (333)
T ss_pred             ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHH----HHHhcCcccCCccccccCcccCC
Confidence            12234689999999999988899999999999999999999999975432111    000000000000000        


Q ss_pred             -------cCccc-----------------cCCCC-HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          582 -------VDPRL-----------------CRDFD-GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       582 -------~d~~l-----------------~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                             ..+.-                 ..... ......+.+++.+||+.||++|||++|++++.+...
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~  304 (333)
T cd06650         234 PGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  304 (333)
T ss_pred             ccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhc
Confidence                   00000                 00000 011245678899999999999999999999998753

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.5e-39  Score=336.00  Aligned_cols=246  Identities=22%  Similarity=0.289  Sum_probs=201.4

Q ss_pred             cCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCCh
Q 042831          360 LGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL  436 (645)
Q Consensus       360 LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL  436 (645)
                      ||+|+||.||++++..+++.||+|.+...   .......+.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            79999999999999999999999998643   334556788999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeeccc
Q 042831          437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG  516 (645)
Q Consensus       437 ~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~g  516 (645)
                      .+++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... ........|
T Consensus        81 ~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~g  155 (312)
T cd05585          81 FHHLQR-EGRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD-DDKTNTFCG  155 (312)
T ss_pred             HHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccC-CCccccccC
Confidence            999865 3468999999999999999999998   99999999999999999999999999999754322 122334578


Q ss_pred             CccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHH
Q 042831          517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIE  596 (645)
Q Consensus       517 t~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~  596 (645)
                      |+.|+|||++.+..++.++|||||||++|||++|+.||......      +.... ...+..      .+...    ...
T Consensus       156 t~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~------~~~~~-~~~~~~------~~~~~----~~~  218 (312)
T cd05585         156 TPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN------EMYRK-ILQEPL------RFPDG----FDR  218 (312)
T ss_pred             CcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH------HHHHH-HHcCCC------CCCCc----CCH
Confidence            99999999999989999999999999999999999999753311      11111 111111      11111    224


Q ss_pred             HHHHHHHHcCCCCCCCCC---CHHHHHHHhccCC
Q 042831          597 RLMIVGLWCAHPDENLRP---SIRQVIHVLNFEA  627 (645)
Q Consensus       597 ~l~~l~~~Cl~~dP~~RP---s~~evl~~L~~~~  627 (645)
                      .+.+++.+||+.||++||   ++.|++.|.++..
T Consensus       219 ~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~  252 (312)
T cd05585         219 DAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQ  252 (312)
T ss_pred             HHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCC
Confidence            566788999999999997   5789999888653

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=5.5e-39  Score=339.14  Aligned_cols=258  Identities=24%  Similarity=0.309  Sum_probs=209.2

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|+||.||++....+++.||+|+++..   ..+..+.+.+|+.++..++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            4688899999999999999999999999999998754   2334567889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++.+....+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||++........
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~  157 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM  157 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence            9999999999997766789999999999999999999998   8999999999999999999999999999986654333


Q ss_pred             cceeecccCccccCccccc------cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          509 SQTTVLAGTMGYMAPECAT------TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~------~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      .......||+.|+|||++.      ...++.++|||||||++|||++|+.||......      ................
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~------~~~~~i~~~~~~~~~~  231 (330)
T cd05601         158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA------KTYNNIMNFQRFLKFP  231 (330)
T ss_pred             eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH------HHHHHHHcCCCccCCC
Confidence            3334457899999999986      456789999999999999999999999754321      1111111111111110


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      +       .......+..++..|++ +|++||+++++++|.++.
T Consensus       232 ~-------~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~  267 (330)
T cd05601         232 E-------DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFS  267 (330)
T ss_pred             C-------CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcC
Confidence            0       00122446677788997 999999999999998875

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=2.4e-39  Score=329.97  Aligned_cols=248  Identities=32%  Similarity=0.562  Sum_probs=195.4

Q ss_pred             CCccCcCCcEEEEEEEEc----CCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          357 DQKLGQGGFGGVYKGFFR----ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~----~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      .+.||.|.||.||+|.+.    ..+..|+||.++.. ..+..+++.+|++.+++++||||++++|+|...+..++|+||+
T Consensus         4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~   83 (259)
T PF07714_consen    4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC   83 (259)
T ss_dssp             EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred             eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence            568999999999999998    34678999999654 3445789999999999999999999999999888899999999


Q ss_pred             CCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc-
Q 042831          432 PNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS-  509 (645)
Q Consensus       432 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~-  509 (645)
                      ++|+|.++|... ...+++.++..|+.||++||.|||+   .+++|+||+++||++++++.+||+|||+++........ 
T Consensus        84 ~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~  160 (259)
T PF07714_consen   84 PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK  160 (259)
T ss_dssp             TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred             cccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccc
Confidence            999999999876 6789999999999999999999998   89999999999999999999999999999866322211 


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ..........|+|||.+....++.++||||||+++|||++ |+.||.....   ..+..    ...++.....       
T Consensus       161 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~---~~~~~----~~~~~~~~~~-------  226 (259)
T PF07714_consen  161 NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN---EEIIE----KLKQGQRLPI-------  226 (259)
T ss_dssp             ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH---HHHHH----HHHTTEETTS-------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccc----ccccccccee-------
Confidence            1222446778999999999999999999999999999999 7888865421   11121    1223322111       


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHh
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL  623 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  623 (645)
                        +......+..++..||+.||++||+++++++.|
T Consensus       227 --~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  227 --PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             --BTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             --ccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence              111234577888999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=2.3e-38  Score=326.48  Aligned_cols=255  Identities=28%  Similarity=0.470  Sum_probs=207.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCC-----eEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETN-----SYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~-----~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      ++|...+.||+|+||.||+|.....+     ..||+|.+.... .....++.+|+.++.+++||||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            46778899999999999999986544     689999986543 344567899999999999999999999999999999


Q ss_pred             EEEEecCCCChhhhhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC
Q 042831          426 LVYEFMPNGSLDSHLFKEN---------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF  490 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~  490 (645)
                      ++|||+++++|.+++....               ..+++..+..++.|++.||.|||+   .+++|+||||+||++++++
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~  161 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGL  161 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCC
Confidence            9999999999999986431               458899999999999999999998   8999999999999999999


Q ss_pred             cEEEeeccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHH
Q 042831          491 NAKIGDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQW  568 (645)
Q Consensus       491 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~  568 (645)
                      .+||+|||+++....... .......++..|+|||.+.++.++.++|||||||++|||++ |..||......   .+.. 
T Consensus       162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~---~~~~-  237 (283)
T cd05048         162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ---EVIE-  237 (283)
T ss_pred             cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH---HHHH-
Confidence            999999999976533221 12233456788999999988899999999999999999998 99999754332   1222 


Q ss_pred             HHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          569 VWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       569 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                         .+..+....         .+......+.+++.+||+.||++||+++||+++|..
T Consensus       238 ---~i~~~~~~~---------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         238 ---MIRSRQLLP---------CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             ---HHHcCCcCC---------CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence               122222111         112234567788899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-39  Score=307.74  Aligned_cols=253  Identities=25%  Similarity=0.372  Sum_probs=213.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      -++|+.++.||+|-||.||.|+.+.++-.||+|++.+.   ..+..+++.+|+++-+.|+||||+++++|+.+....||+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            46788999999999999999999999999999998653   233457899999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          428 YEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      +||.++|+|...|... ...+++.....++.|+|.||.|+|.   ++|+||||||+|+|++.++..||+|||-+....  
T Consensus       101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p--  175 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP--  175 (281)
T ss_pred             EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence            9999999999999753 4568888999999999999999998   999999999999999999999999999986432  


Q ss_pred             CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                       .......+||..|++||...+...+...|+|++|++.||++.|.+||+....+   .....    +.   -.+..+|  
T Consensus       176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~---etYkr----I~---k~~~~~p--  242 (281)
T KOG0580|consen  176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS---ETYKR----IR---KVDLKFP--  242 (281)
T ss_pred             -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH---HHHHH----HH---HccccCC--
Confidence             33445678999999999999999999999999999999999999999865522   11111    11   1122222  


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                           ........+++..|+..+|.+|.+..|+++|.|-.
T Consensus       243 -----~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~  277 (281)
T KOG0580|consen  243 -----STISGGAADLISRLLVKNPIERLALTEVMDHPWIV  277 (281)
T ss_pred             -----cccChhHHHHHHHHhccCccccccHHHHhhhHHHH
Confidence                 12234566788999999999999999999998853

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=5e-39  Score=340.75  Aligned_cols=251  Identities=27%  Similarity=0.362  Sum_probs=206.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCC-eEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETN-SYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~-~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .++|...+.||+|+||.||+|.+..++ ..||+|++...   .....+.+.+|+.++..++||||+++++++.+++..++
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l  108 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL  108 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence            357888999999999999999876554 68999998643   23345678899999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++|+|.+++... ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus       109 v~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~  184 (340)
T PTZ00426        109 VLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR  184 (340)
T ss_pred             EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence            99999999999998644 468999999999999999999998   89999999999999999999999999999865421


Q ss_pred             CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                          .....||+.|+|||++.+..++.++|||||||++|||++|+.||......   .    .......+..      .+
T Consensus       185 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~---~----~~~~i~~~~~------~~  247 (340)
T PTZ00426        185 ----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL---L----IYQKILEGII------YF  247 (340)
T ss_pred             ----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH---H----HHHHHhcCCC------CC
Confidence                23457899999999999888999999999999999999999999754321   1    1111112211      01


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE  626 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~  626 (645)
                      ....+    ..+..++.+|++.||++|+     +++++++|.++.
T Consensus       248 p~~~~----~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~  288 (340)
T PTZ00426        248 PKFLD----NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFG  288 (340)
T ss_pred             CCCCC----HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcC
Confidence            11122    3456788999999999995     999999999875

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=2.1e-38  Score=323.81  Aligned_cols=256  Identities=29%  Similarity=0.474  Sum_probs=207.9

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCC---CeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRET---NSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~---~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .++|+..+.||+|+||.||+|.+...   ...||+|.++.. ......+|.+|+.++.+++||||+++++++...+..++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i   82 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI   82 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence            35788899999999999999998643   457999988654 33445688999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++++|.+++......+++..+..++.|++.||.|||+   .+|+|+||||+||++++++.+||+|||+++.....
T Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~  159 (266)
T cd05033          83 ITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS  159 (266)
T ss_pred             EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence            999999999999997766689999999999999999999998   89999999999999999999999999999876522


Q ss_pred             CCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          507 KGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       507 ~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      ... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......   .+.+    ...++...    +
T Consensus       160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~---~~~~----~~~~~~~~----~  228 (266)
T cd05033         160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ---DVIK----AVEDGYRL----P  228 (266)
T ss_pred             ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH---HHHH----HHHcCCCC----C
Confidence            221 1122334678999999998899999999999999999998 99998643321   1222    11121111    1


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                           .+......+.+++.+|++.+|++||+++|++++|..
T Consensus       229 -----~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~  264 (266)
T cd05033         229 -----PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK  264 (266)
T ss_pred             -----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence                 011223567889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=3.3e-38  Score=319.61  Aligned_cols=248  Identities=27%  Similarity=0.428  Sum_probs=200.2

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCCh
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL  436 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL  436 (645)
                      ++||+|+||.||+|++..+++.+|+|.+... ..+....+.+|++++++++||||++++++|...+..++||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            4699999999999999988999999987654 344567799999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce-eecc
Q 042831          437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT-TVLA  515 (645)
Q Consensus       437 ~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~-~~~~  515 (645)
                      .+++......+++..++.++.|+++||.|||+   .+++||||||+||+++.++.+||+|||+++.......... ....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  157 (252)
T cd05084          81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ  157 (252)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence            99997666678999999999999999999998   8999999999999999999999999999875432211111 1112


Q ss_pred             cCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHH
Q 042831          516 GTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQ  594 (645)
Q Consensus       516 gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~  594 (645)
                      .+..|+|||.+..+.++.++||||||+++|||++ |..||.......       .......+.     .    ...+...
T Consensus       158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-------~~~~~~~~~-----~----~~~~~~~  221 (252)
T cd05084         158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ-------TREAIEQGV-----R----LPCPELC  221 (252)
T ss_pred             CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH-------HHHHHHcCC-----C----CCCcccC
Confidence            3456999999999899999999999999999998 888886433211       111111110     0    1111122


Q ss_pred             HHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          595 IERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       595 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ...+.+++.+|++++|++|||+.++++.|.
T Consensus       222 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         222 PDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            346778899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=8.3e-39  Score=338.51  Aligned_cols=267  Identities=24%  Similarity=0.317  Sum_probs=202.4

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC-----CeEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK-----KELL  425 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~-----~~~~  425 (645)
                      +|...++||+|+||.||+|++..+++.||||++...  ......++.+|++++++++||||+++++++...     ...+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            477789999999999999999999999999998643  233456788999999999999999999987543     3589


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +|||||+ ++|.+++.. ...+++..+..++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        81 lv~e~~~-~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~  155 (338)
T cd07859          81 VVFELME-SDLHQVIKA-NDDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVAFN  155 (338)
T ss_pred             EEEecCC-CCHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence            9999995 688888754 3468999999999999999999998   8999999999999999999999999999975432


Q ss_pred             cCCc--ceeecccCccccCcccccc--CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc-------
Q 042831          506 AKGS--QTTVLAGTMGYMAPECATT--GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG-------  574 (645)
Q Consensus       506 ~~~~--~~~~~~gt~~y~aPE~~~~--~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~-------  574 (645)
                      ....  ......|+..|+|||++.+  ..++.++|||||||++|||++|+.||.......   ....+.+..+       
T Consensus       156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~---~~~~~~~~~~~~~~~~~  232 (338)
T cd07859         156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH---QLDLITDLLGTPSPETI  232 (338)
T ss_pred             ccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH---HHHHHHHHhCCCCHHHH
Confidence            2211  1234568999999999866  578999999999999999999999997543211   1111111111       


Q ss_pred             ----CCccc---cccCccccCCCC---HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          575 ----NGKLL---EAVDPRLCRDFD---GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       575 ----~~~l~---~~~d~~l~~~~~---~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                          .....   ..+.+.......   ......+.+++.+||+.||++|||++|++++.++..
T Consensus       233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~  295 (338)
T cd07859         233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKG  295 (338)
T ss_pred             HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhh
Confidence                00000   000000000000   001234678889999999999999999999998753

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=2.7e-38  Score=338.43  Aligned_cols=258  Identities=25%  Similarity=0.342  Sum_probs=200.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|+..+.||+|+||.||++....+++.||+|+++..   .......+.+|+.++.+++|+||+++++.+.+....++||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            4688899999999999999999999999999998653   2334467888999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++.+. ..+++.....++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus        81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~  156 (363)
T cd05628          81 EFLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR  156 (363)
T ss_pred             cCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence            999999999998653 568999999999999999999998   9999999999999999999999999999875432110


Q ss_pred             ----------------------------------cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCC
Q 042831          509 ----------------------------------SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPI  554 (645)
Q Consensus       509 ----------------------------------~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf  554 (645)
                                                        .......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf  236 (363)
T cd05628         157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF  236 (363)
T ss_pred             ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence                                              0012357999999999999989999999999999999999999999


Q ss_pred             CCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHH--cCCCCCCCCCCHHHHHHHhccC
Q 042831          555 NPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLW--CAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       555 ~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~--Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ......   .....+    ......-.+.+..  ..+. +.   .+++.+  |...++..||+++|+++|.++.
T Consensus       237 ~~~~~~---~~~~~i----~~~~~~~~~p~~~--~~s~-~~---~~li~~l~~~~~~r~~r~~~~ei~~hp~f~  297 (363)
T cd05628         237 CSETPQ---ETYKKV----MNWKETLIFPPEV--PISE-KA---KDLILRFCCEWEHRIGAPGVEEIKTNPFFE  297 (363)
T ss_pred             CCCCHH---HHHHHH----HcCcCcccCCCcC--CCCH-HH---HHHHHHHcCChhhcCCCCCHHHHhCCCCCC
Confidence            754422   111111    1111000111111  1222 22   223333  4333445679999999998875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.3e-39  Score=343.46  Aligned_cols=256  Identities=24%  Similarity=0.324  Sum_probs=209.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|+||.||+|++..+++.||+|++...   .......+.+|++++..++|+||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            4688899999999999999999989999999998653   2244567889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC-
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK-  507 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~-  507 (645)
                      ||+++++|.+++.+. ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... 
T Consensus        81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~  156 (350)
T cd05573          81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD  156 (350)
T ss_pred             cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence            999999999998655 678999999999999999999999   999999999999999999999999999998654332 


Q ss_pred             ---------------------------CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCC
Q 042831          508 ---------------------------GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQ  560 (645)
Q Consensus       508 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~  560 (645)
                                                 ........||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~  236 (350)
T cd05573         157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ  236 (350)
T ss_pred             ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence                                       11223356899999999999999999999999999999999999999754421


Q ss_pred             CchhHHHHHHHHhc-CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHhccC
Q 042831          561 GQVSLLQWVWDLYG-NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPS-IRQVIHVLNFE  626 (645)
Q Consensus       561 ~~~~l~~~~~~~~~-~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~L~~~  626 (645)
                      .   .   ...... ...+.   -+. ...    ....+..++..|++ ||++||+ +++++++.++.
T Consensus       237 ~---~---~~~i~~~~~~~~---~p~-~~~----~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~  289 (350)
T cd05573         237 E---T---YNKIINWKESLR---FPP-DPP----VSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFK  289 (350)
T ss_pred             H---H---HHHHhccCCccc---CCC-CCC----CCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcC
Confidence            1   1   111111 01110   010 011    23456677788997 9999999 99999999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=7.3e-39  Score=327.77  Aligned_cols=259  Identities=23%  Similarity=0.313  Sum_probs=207.0

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh--------------hhHHHHHHHHHHHHhcCCCCccE
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK--------------QGIKEYASEVKIISRLRHRNLVQ  413 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~--------------~~~~~~~~Ei~~l~~l~H~nlv~  413 (645)
                      ...-++|+..+.||+|.||.|-+|+...+++.||||++.+...              ...+...+|+.+|++++|||||+
T Consensus        93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~  172 (576)
T KOG0585|consen   93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK  172 (576)
T ss_pred             ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence            3445789999999999999999999999999999999864311              12357889999999999999999


Q ss_pred             EEeeeeeC--CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc
Q 042831          414 LLGWCHEK--KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN  491 (645)
Q Consensus       414 l~~~~~~~--~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~  491 (645)
                      |+++..+.  +.+|||+|||..|.+...= ..+..+++.+.+++++++..||.|||.   ++||||||||+|+||+++|.
T Consensus       173 LiEvLDDP~s~~~YlVley~s~G~v~w~p-~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~g~  248 (576)
T KOG0585|consen  173 LIEVLDDPESDKLYLVLEYCSKGEVKWCP-PDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSDGT  248 (576)
T ss_pred             EEEeecCcccCceEEEEEeccCCccccCC-CCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCCCc
Confidence            99998764  6899999999998875432 122338999999999999999999999   99999999999999999999


Q ss_pred             EEEeeccCcccccccC----CcceeecccCccccCccccccCC----CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCch
Q 042831          492 AKIGDFGLARLVEHAK----GSQTTVLAGTMGYMAPECATTGK----ASKESDVYSFGIVALEIACGRKPINPKAPQGQV  563 (645)
Q Consensus       492 ~kl~DfGla~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~----~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~  563 (645)
                      +||+|||.+.....+.    .......+||+.|+|||...++.    .+.+.||||+||+||.|+.|+.||-....   .
T Consensus       249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~---~  325 (576)
T KOG0585|consen  249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE---L  325 (576)
T ss_pred             EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH---H
Confidence            9999999998663321    12233468999999999887743    46789999999999999999999974321   1


Q ss_pred             hHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          564 SLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       564 ~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .    ..+.+.+        ..+.-....++.+.+..|++++|++||++|.+..+|..|+|-
T Consensus       326 ~----l~~KIvn--------~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv  375 (576)
T KOG0585|consen  326 E----LFDKIVN--------DPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV  375 (576)
T ss_pred             H----HHHHHhc--------CcccCCCcccccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence            1    1222222        222111122455677888999999999999999999999984

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=1.1e-38  Score=342.69  Aligned_cols=259  Identities=25%  Similarity=0.368  Sum_probs=203.2

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCC-----CeEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeC
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRET-----NSYIAVKRVSQGS-KQGIKEYASEVKIISRL-RHRNLVQLLGWCHEK  421 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~-----~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~  421 (645)
                      ...++|...+.||+|+||.||+|+....     +..||+|++.... ......+.+|+++++.+ +|+||++++++|...
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~  114 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG  114 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence            3445788899999999999999986433     3579999997543 33456788999999999 899999999999999


Q ss_pred             CeEEEEEEecCCCChhhhhhhcC---------------------------------------------------------
Q 042831          422 KELLLVYEFMPNGSLDSHLFKEN---------------------------------------------------------  444 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~---------------------------------------------------------  444 (645)
                      +..++||||+++|+|.+++....                                                         
T Consensus       115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (374)
T cd05106         115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS  194 (374)
T ss_pred             CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence            99999999999999999885321                                                         


Q ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc-e
Q 042831          445 ------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ-T  511 (645)
Q Consensus       445 ------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~-~  511 (645)
                                  ..+++..+.+++.||++||.|||+   ++|+||||||+|||+++++.+||+|||+++......... .
T Consensus       195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~  271 (374)
T cd05106         195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVK  271 (374)
T ss_pred             ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeec
Confidence                        247888999999999999999998   899999999999999999999999999997654322111 1


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      ....++..|+|||++.+..++.++|||||||++|||++ |+.||.......  ..    ......+.     .+..... 
T Consensus       272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~--~~----~~~~~~~~-----~~~~~~~-  339 (374)
T cd05106         272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS--KF----YKMVKRGY-----QMSRPDF-  339 (374)
T ss_pred             cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH--HH----HHHHHccc-----CccCCCC-
Confidence            12234567999999998899999999999999999997 999997543221  11    11111110     1111011 


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                         ....+.+++.+||+.||++||++.++++.|+.
T Consensus       340 ---~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~  371 (374)
T cd05106         340 ---APPEIYSIMKMCWNLEPTERPTFSQISQLIQR  371 (374)
T ss_pred             ---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence               12457788899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=5.2e-39  Score=321.88  Aligned_cols=251  Identities=23%  Similarity=0.378  Sum_probs=214.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ..+|++.+.||+|.||+|-+++....|+.||||.++++   ++++.-.+.+|+++|+.|+||||++++++|+..+.+.||
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv  131 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV  131 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence            35677888999999999999999888999999988765   456677788999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||..+|.|++|+.+ .+.|++...+++++||.+|+.|+|.   .+++|||||.+|||||.|+++||+|||++.++... 
T Consensus       132 MEYaS~GeLYDYiSe-r~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~-  206 (668)
T KOG0611|consen  132 MEYASGGELYDYISE-RGSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK-  206 (668)
T ss_pred             EEecCCccHHHHHHH-hccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhhccc-
Confidence            999999999999954 4579999999999999999999998   99999999999999999999999999999877543 


Q ss_pred             CcceeecccCccccCccccccCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~-t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                       ...+.++|.+-|.+||++.+.+| .+..|-|||||+||-|+.|..||++.+.   ..++.    .+..|...+.-    
T Consensus       207 -kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh---k~lvr----QIs~GaYrEP~----  274 (668)
T KOG0611|consen  207 -KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH---KRLVR----QISRGAYREPE----  274 (668)
T ss_pred             -cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH---HHHHH----HhhcccccCCC----
Confidence             34556899999999999999886 6889999999999999999999986442   22332    22233332221    


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                             ......-|++|+|..+|++|-|+++|..|.|-
T Consensus       275 -------~PSdA~gLIRwmLmVNP~RRATieDiAsHWWv  306 (668)
T KOG0611|consen  275 -------TPSDASGLIRWMLMVNPERRATIEDIASHWWV  306 (668)
T ss_pred             -------CCchHHHHHHHHHhcCcccchhHHHHhhhhee
Confidence                   12244568899999999999999999999984

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=4.6e-38  Score=321.69  Aligned_cols=261  Identities=26%  Similarity=0.409  Sum_probs=209.9

Q ss_pred             HHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          346 ELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       346 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      |++.+++++.....||+|+||.||+|++..++..|++|.+........+.+.+|++++++++|+||+++++++..++..+
T Consensus         2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   81 (268)
T cd06624           2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK   81 (268)
T ss_pred             CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence            34556777777889999999999999998889999999988776667788999999999999999999999999999999


Q ss_pred             EEEEecCCCChhhhhhhcCCCC--CHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC-CCcEEEeeccCccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLL--TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLARL  502 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~-~~~~kl~DfGla~~  502 (645)
                      +|+||+++++|.+++......+  ++..+..++.||+.||+|||+   .+|+||||||+||+++. ++.+||+|||++..
T Consensus        82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~  158 (268)
T cd06624          82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKR  158 (268)
T ss_pred             EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence            9999999999999997654445  888899999999999999998   89999999999999976 67999999999875


Q ss_pred             ccccCCcceeecccCccccCccccccCC--CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATTGK--ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE  580 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~  580 (645)
                      ..... .......++..|+|||++....  ++.++||||||+++|||++|+.||........   ..+.....   .   
T Consensus       159 ~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~---~~~~~~~~---~---  228 (268)
T cd06624         159 LAGIN-PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA---AMFKVGMF---K---  228 (268)
T ss_pred             cccCC-CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh---hHhhhhhh---c---
Confidence            53222 2223345788999999986654  78999999999999999999999964322111   01100000   0   


Q ss_pred             ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       581 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                       ..+.+    +....+.+..++.+|++.+|++|||+.|++++.+
T Consensus       229 -~~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~  267 (268)
T cd06624         229 -IHPEI----PESLSAEAKNFILRCFEPDPDKRASAHDLLQDPF  267 (268)
T ss_pred             -cCCCC----CcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCC
Confidence             01111    1222345778889999999999999999999866

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1.7e-38  Score=323.34  Aligned_cols=255  Identities=27%  Similarity=0.463  Sum_probs=210.2

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ...+|...++||+|+||.||+|.+.. +..+++|.+.........++.+|+.++.+++|+|++++++++...+..++|||
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   82 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE   82 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence            44578889999999999999999987 88899999987766567789999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          430 FMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       430 y~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |+++++|.+++... ...+++.++..++.|++.||.|||+   ++++|+||||+||++++++.+||+|||++........
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~  159 (261)
T cd05148          83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY  159 (261)
T ss_pred             ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence            99999999999753 4568999999999999999999998   8999999999999999999999999999976543221


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      . .....++..|+|||.+..+.++.++||||||++++||++ |+.||......   .......    .+..     .   
T Consensus       160 ~-~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~---~~~~~~~----~~~~-----~---  223 (261)
T cd05148         160 L-SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH---EVYDQIT----AGYR-----M---  223 (261)
T ss_pred             c-ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH---HHHHHHH----hCCc-----C---
Confidence            1 123345678999999988889999999999999999998 89999754321   2222211    1110     0   


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                       ..+....+.+.+++.+|++.||++|||++++++.|+.
T Consensus       224 -~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         224 -PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             -CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence             1111233567788999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=2.5e-38  Score=332.15  Aligned_cols=256  Identities=25%  Similarity=0.430  Sum_probs=204.9

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCe----EEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNS----YIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~----~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      ..+|+..+.||+|+||.||+|++..++.    .||+|.+... .....+++.+|+.+++.++||||++++|+|... ..+
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~   84 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ   84 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence            3568889999999999999999865554    4899998654 344567899999999999999999999999765 567


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +|+||+++|+|.+++.+....+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        85 ~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~  161 (316)
T cd05108          85 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  161 (316)
T ss_pred             eeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccccC
Confidence            9999999999999998777779999999999999999999998   8999999999999999999999999999987653


Q ss_pred             cCCcc-eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          506 AKGSQ-TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       506 ~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ..... .....++..|+|||++.+..++.++|||||||++|||++ |+.||......   .+    ......+...  ..
T Consensus       162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~---~~----~~~~~~~~~~--~~  232 (316)
T cd05108         162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---EI----SSILEKGERL--PQ  232 (316)
T ss_pred             CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---HH----HHHHhCCCCC--CC
Confidence            32221 112234668999999999999999999999999999997 99999753321   11    1111121111  01


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      +   ..    ....+..++.+||+.+|++||++.+++..+...
T Consensus       233 ~---~~----~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~  268 (316)
T cd05108         233 P---PI----CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  268 (316)
T ss_pred             C---CC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            1   11    123567888999999999999999999998743

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=2.6e-38  Score=334.34  Aligned_cols=257  Identities=23%  Similarity=0.283  Sum_probs=205.3

Q ss_pred             CCCCCCccCcCCcEEEEEEEEc---CCCeEEEEEEeccC----ChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFR---ETNSYIAVKRVSQG----SKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~---~~~~~vavK~~~~~----~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~  424 (645)
                      +|+..+.||+|+||.||+++..   .+++.||+|.+...    .....+.+..|++++.+++ |+||+++++++..++..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            4778899999999999999874   46889999998643    2233456788999999995 89999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++||||+++|+|.+++.+. ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        81 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~  156 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL  156 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence            9999999999999988643 468999999999999999999998   899999999999999999999999999998654


Q ss_pred             ccCCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          505 HAKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       505 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ...........||..|+|||++.+. .++.++|||||||++|||++|+.||..........   .+......      .+
T Consensus       157 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~---~~~~~~~~------~~  227 (332)
T cd05614         157 SEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQS---EVSRRILK------CD  227 (332)
T ss_pred             ccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHH---HHHHHHhc------CC
Confidence            4333334456799999999998765 47899999999999999999999997543322211   11111111      11


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE  626 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~  626 (645)
                      +.+....    ...+.+++.+||+.||++||     ++++++++.++.
T Consensus       228 ~~~~~~~----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~  271 (332)
T cd05614         228 PPFPSFI----GPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFK  271 (332)
T ss_pred             CCCCCCC----CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcC
Confidence            2222222    23566788999999999999     888999998864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=5.8e-38  Score=318.01  Aligned_cols=251  Identities=26%  Similarity=0.410  Sum_probs=208.3

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +|...+.||+|++|.||+|....+++.|++|.+...  .......+.+|++++++++|||++++++++...+..++||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            467788999999999999999989999999998643  345567889999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      +++++|.+++... ...+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++....... 
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~-  156 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN-  156 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCccc-
Confidence            9999999999764 5678999999999999999999998   8999999999999999999999999999886543322 


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      ......++..|+|||++.+..++.++|+||||++++||++|+.||.....   ......    ..++..     +    .
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~----~~~~~~-----~----~  220 (256)
T cd08529         157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ---GALILK----IIRGVF-----P----P  220 (256)
T ss_pred             hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH---HHHHHH----HHcCCC-----C----C
Confidence            22334678899999999998999999999999999999999999975432   111111    111111     1    1


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHh
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL  623 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  623 (645)
                      ........+.+++.+|++.+|++||++.+++++.
T Consensus       221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~  254 (256)
T cd08529         221 VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNP  254 (256)
T ss_pred             CccccCHHHHHHHHHHccCCcccCcCHHHHhhCC
Confidence            1112335678889999999999999999999874

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.1e-38  Score=318.87  Aligned_cols=255  Identities=26%  Similarity=0.426  Sum_probs=206.4

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-----hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-----KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ++|...+.||+|++|.||++....+++.+|+|.+....     ....+.+.+|++++.+++||||+++++++.+++..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            57888999999999999999998889999999886432     2234678899999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      |+||+++++|.+++... ..+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.++|+|||+++.....
T Consensus        82 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~  157 (263)
T cd06625          82 FMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI  157 (263)
T ss_pred             EEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence            99999999999988543 468899999999999999999998   89999999999999999999999999998765432


Q ss_pred             CCcce--eecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          507 KGSQT--TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       507 ~~~~~--~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      .....  ....++..|+|||.+.+..++.++||||||+++|||++|+.||......   ...   ....... .    .+
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~---~~~~~~~-~----~~  226 (263)
T cd06625         158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM---AAI---FKIATQP-T----NP  226 (263)
T ss_pred             ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH---HHH---HHHhccC-C----CC
Confidence            21111  2345778999999999988999999999999999999999999743221   111   1111111 0    11


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .+    +......+..++..||+.+|++|||+++++++.++
T Consensus       227 ~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         227 QL----PSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             CC----CccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            11    11223456778899999999999999999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=4.2e-38  Score=339.17  Aligned_cols=257  Identities=21%  Similarity=0.319  Sum_probs=201.6

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .|...+.||+|+||.||+|++..+++.||+|++...   .....+.+.+|++++.+++|+||+++++++.+.+.+++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            577889999999999999999999999999998653   23445678999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC-
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-  508 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~-  508 (645)
                      |+++|+|.+++.+. ..+++.....++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....... 
T Consensus        82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~  157 (381)
T cd05626          82 YIPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS  157 (381)
T ss_pred             cCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence            99999999998653 468899999999999999999998   8999999999999999999999999999764311000 


Q ss_pred             ---------------------------------------------cceeecccCccccCccccccCCCCcchhHHHHHHH
Q 042831          509 ---------------------------------------------SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIV  543 (645)
Q Consensus       509 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvl  543 (645)
                                                                   .......||+.|+|||++.+..++.++|||||||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i  237 (381)
T cd05626         158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI  237 (381)
T ss_pred             ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence                                                         00123469999999999998889999999999999


Q ss_pred             HHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHH--cCCCCCCCCCCHHHHHH
Q 042831          544 ALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLW--CAHPDENLRPSIRQVIH  621 (645)
Q Consensus       544 l~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~--Cl~~dP~~RPs~~evl~  621 (645)
                      +|||++|+.||......+.   ..   .......... +.+  ...++.    .+.+++.+  |+.++|..||+++|+++
T Consensus       238 l~elltG~~Pf~~~~~~~~---~~---~i~~~~~~~~-~~~--~~~~s~----~~~dli~~ll~~~~~~~~R~~~~~~l~  304 (381)
T cd05626         238 LFEMLVGQPPFLAPTPTET---QL---KVINWENTLH-IPP--QVKLSP----EAVDLITKLCCSAEERLGRNGADDIKA  304 (381)
T ss_pred             HHHHHhCCCCCcCCCHHHH---HH---HHHccccccC-CCC--CCCCCH----HHHHHHHHHccCcccccCCCCHHHHhc
Confidence            9999999999975443211   11   1110000000 011  011222    23334433  67777888999999999


Q ss_pred             HhccC
Q 042831          622 VLNFE  626 (645)
Q Consensus       622 ~L~~~  626 (645)
                      |.++.
T Consensus       305 hp~f~  309 (381)
T cd05626         305 HPFFS  309 (381)
T ss_pred             CcccC
Confidence            99875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1.8e-38  Score=334.35  Aligned_cols=252  Identities=23%  Similarity=0.335  Sum_probs=203.8

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCC-CccEEEeeeeeCCeEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHR-NLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~-nlv~l~~~~~~~~~~~lV~  428 (645)
                      +|...+.||+|+||.||+|+...+++.||+|++...   .....+.+..|.+++..++|+ +|+++++++...+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            477889999999999999999999999999998753   234456788899999999765 5888999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++... ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... .
T Consensus        81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~-~  155 (324)
T cd05587          81 EYVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG-G  155 (324)
T ss_pred             cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC-C
Confidence            999999999888543 468999999999999999999998   89999999999999999999999999998643221 2


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      .......||..|+|||++.+..++.++|||||||++|||++|+.||......   .+...+    .+..      ..+..
T Consensus       156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~---~~~~~i----~~~~------~~~~~  222 (324)
T cd05587         156 KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED---ELFQSI----MEHN------VSYPK  222 (324)
T ss_pred             CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHHHHH----HcCC------CCCCC
Confidence            2234457999999999999999999999999999999999999999754321   112111    1111      11111


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSI-----RQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~L~~~  626 (645)
                      .    ....+.+++.+||+.||++||+.     ++++++.++.
T Consensus       223 ~----~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~  261 (324)
T cd05587         223 S----LSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFR  261 (324)
T ss_pred             C----CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcC
Confidence            1    22456778899999999999976     8898887764

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=2.2e-38  Score=331.31  Aligned_cols=272  Identities=21%  Similarity=0.309  Sum_probs=208.1

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|...++||+|+||.||+|+...+++.||+|.++... ......+.+|++++++++||||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            56888999999999999999999889999999987543 23345678899999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +++ +|.+++...+..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....... .
T Consensus        86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~  160 (309)
T cd07872          86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK-T  160 (309)
T ss_pred             CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCCcc-c
Confidence            974 8888887666678999999999999999999998   8999999999999999999999999999875432221 1


Q ss_pred             eeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHH--------HHHhcCC-cccc
Q 042831          511 TTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWV--------WDLYGNG-KLLE  580 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~--------~~~~~~~-~l~~  580 (645)
                      .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+........        |...... ....
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (309)
T cd07872         161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKN  240 (309)
T ss_pred             cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhh
Confidence            223457889999998865 45899999999999999999999999765433221111110        1000000 0000


Q ss_pred             ccCccccCC----CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          581 AVDPRLCRD----FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       581 ~~d~~l~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      .-.+.....    ........+.+++.+|++.||++|||++|++++.++...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  292 (309)
T cd07872         241 YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL  292 (309)
T ss_pred             hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence            000000000    000112356788899999999999999999999998753

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=3.4e-38  Score=333.03  Aligned_cols=254  Identities=21%  Similarity=0.332  Sum_probs=203.8

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.||+|+||.||++++..+++.||+|.+...   .....+.+..|+.++.++ +||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            4699999999999999999999999998753   334456678899988877 799999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |+|..++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... ......
T Consensus        81 ~~L~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~-~~~~~~  155 (329)
T cd05618          81 GDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTST  155 (329)
T ss_pred             CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC-CCcccc
Confidence            999888754 3568999999999999999999998   89999999999999999999999999998753221 222334


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCC--chhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQG--QVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~--~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ..||..|+|||++.+..++.++|||||||++|||++|+.||.......  ......++......+..      .+    +
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~~----p  225 (329)
T cd05618         156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------RI----P  225 (329)
T ss_pred             ccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC------CC----C
Confidence            678999999999999999999999999999999999999996322111  11222333333322211      11    1


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHhccC
Q 042831          592 GQQIERLMIVGLWCAHPDENLRPS------IRQVIHVLNFE  626 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RPs------~~evl~~L~~~  626 (645)
                      ......+..++.+||+.||++||+      +.++++|.++.
T Consensus       226 ~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~  266 (329)
T cd05618         226 RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR  266 (329)
T ss_pred             CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCC
Confidence            112345667889999999999998      68999998764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.3e-38  Score=321.45  Aligned_cols=254  Identities=30%  Similarity=0.444  Sum_probs=205.2

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ..++|+..+.||+|++|.||+|.+.. ++.||+|.++... ...+++.+|++++++++|+|++++++++...+..++|||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE   81 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence            34668889999999999999999765 5789999986543 345678999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          430 FMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       430 y~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |+++++|.+++... ...+++..+..++.|++.||.|||+   .+++|+||||+||++++++.+||+|||+++.......
T Consensus        82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  158 (261)
T cd05068          82 LMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY  158 (261)
T ss_pred             cccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence            99999999998654 3578999999999999999999998   8999999999999999999999999999987653222


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      ........+..|+|||++.+..++.++||||||++++||++ |+.||......   .+..    ....+..         
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~----~~~~~~~---------  222 (261)
T cd05068         159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA---EVLQ----QVDQGYR---------  222 (261)
T ss_pred             cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH---HHHH----HHHcCCC---------
Confidence            11111223457999999998899999999999999999999 99999643321   1111    1111110         


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ...+......+.+++.+|++.+|++||++.++++.|+
T Consensus       223 ~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~  259 (261)
T cd05068         223 MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLE  259 (261)
T ss_pred             CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence            0111123356788999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-38  Score=322.03  Aligned_cols=263  Identities=30%  Similarity=0.410  Sum_probs=201.7

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHh--cCCCCccEEEeeeeeCC----eEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISR--LRHRNLVQLLGWCHEKK----ELLL  426 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nlv~l~~~~~~~~----~~~l  426 (645)
                      .....+++|+|+||.||||.+.  ++.||||++..   +..+.|.+|-++.+.  ++|+||+++++.-....    +++|
T Consensus       211 pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL  285 (534)
T KOG3653|consen  211 PLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL  285 (534)
T ss_pred             chhhHHHhhcCccceeehhhcc--CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence            4455788999999999999997  58999999864   445677888777765  58999999999877655    8999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhc------CCCeeeccCCCCCeEECCCCcEEEeeccCc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW------EQCVVHRDIKSSNIMLDSNFNAKIGDFGLA  500 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivH~Dlkp~NILld~~~~~kl~DfGla  500 (645)
                      |+||.++|+|.++|..  ..++|....+|+.-+++||+|||++.      +++|+|||||++|||+..++.+.|+|||+|
T Consensus       286 Vt~fh~kGsL~dyL~~--ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA  363 (534)
T KOG3653|consen  286 VTEFHPKGSLCDYLKA--NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA  363 (534)
T ss_pred             EeeeccCCcHHHHHHh--ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence            9999999999999954  57899999999999999999999864      567999999999999999999999999999


Q ss_pred             ccccccCCc-ceeecccCccccCccccccCC------CCcchhHHHHHHHHHHHHcCCCCCCCCC-CCCch---------
Q 042831          501 RLVEHAKGS-QTTVLAGTMGYMAPECATTGK------ASKESDVYSFGIVALEIACGRKPINPKA-PQGQV---------  563 (645)
Q Consensus       501 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~------~t~~sDV~SfGvll~elltG~~pf~~~~-~~~~~---------  563 (645)
                      ..+...... .+...+||.+|||||++.+..      .-.+.||||+|.+||||++...-+.... ++-+.         
T Consensus       364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h  443 (534)
T KOG3653|consen  364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH  443 (534)
T ss_pred             EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence            988754432 334478999999999986532      2347899999999999998765543211 11111         


Q ss_pred             hHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          564 SLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       564 ~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      --++-++++.-..+....+.......   ..+..+.+.+..||..||+.|-|+.=|-+.++.
T Consensus       444 Pt~e~mq~~VV~kK~RP~~p~~W~~h---~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~  502 (534)
T KOG3653|consen  444 PTLEEMQELVVRKKQRPKIPDAWRKH---AGMAVLCETIEECWDHDAEARLTAGCVEERMAE  502 (534)
T ss_pred             CCHHHHHHHHHhhccCCCChhhhhcC---ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHH
Confidence            11223333332223222222222222   346778888999999999999999888777764

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=3.4e-38  Score=333.04  Aligned_cols=254  Identities=21%  Similarity=0.339  Sum_probs=205.2

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.||+|+||.||++.+..+++.||+|.++..   .....+.+..|..++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4699999999999999999999999999753   233456688999999998 699999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |+|..++... ..+++..+..++.||+.||.|||+   ++++||||||+|||++.++.+||+|||+++.... .......
T Consensus        81 g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~-~~~~~~~  155 (329)
T cd05588          81 GDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR-PGDTTST  155 (329)
T ss_pred             CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCcccccccc-CCCcccc
Confidence            9998887543 568999999999999999999998   8999999999999999999999999999874321 1222334


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCC--chhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQG--QVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~--~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ..||..|+|||++.+..++.++|||||||++|||++|+.||+.....+  .....++......++..      .+.... 
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~------~~p~~~-  228 (329)
T cd05588         156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI------RIPRSL-  228 (329)
T ss_pred             ccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC------CCCCCC-
Confidence            578999999999999899999999999999999999999997432211  11222333333322221      111112 


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHhccC
Q 042831          592 GQQIERLMIVGLWCAHPDENLRPS------IRQVIHVLNFE  626 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RPs------~~evl~~L~~~  626 (645)
                         ...+..++..||+.||++||+      ++++++|.++.
T Consensus       229 ---~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~  266 (329)
T cd05588         229 ---SVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFR  266 (329)
T ss_pred             ---CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCC
Confidence               235677889999999999987      89999998875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=1.2e-38  Score=341.97  Aligned_cols=262  Identities=21%  Similarity=0.261  Sum_probs=208.4

Q ss_pred             HHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe
Q 042831          347 LALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE  423 (645)
Q Consensus       347 l~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~  423 (645)
                      +....++|...++||+|+||.||+++...+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.+++.
T Consensus        38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~  117 (370)
T cd05596          38 LRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKY  117 (370)
T ss_pred             CCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence            334567899999999999999999999999999999998643   22344567889999999999999999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      .++||||+++|+|.+++..  ..+++.....++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~--~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~  192 (370)
T cd05596         118 LYMVMEYMPGGDLVNLMSN--YDIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM  192 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence            9999999999999998854  357888899999999999999998   89999999999999999999999999999865


Q ss_pred             cccCCcceeecccCccccCccccccC----CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccc
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTG----KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL  579 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~  579 (645)
                      ............||+.|+|||++...    .++.++|||||||++|||++|+.||......   ....    ....+.-.
T Consensus       193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~---~~~~----~i~~~~~~  265 (370)
T cd05596         193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV---GTYS----KIMDHKNS  265 (370)
T ss_pred             cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH---HHHH----HHHcCCCc
Confidence            43322233345799999999988653    4789999999999999999999999754321   1111    11111100


Q ss_pred             cccCccccCCCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHhccC
Q 042831          580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENL--RPSIRQVIHVLNFE  626 (645)
Q Consensus       580 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~~~  626 (645)
                      -.. +   .  .......+.+++..||+.+|++  ||++.|+++|.++.
T Consensus       266 ~~~-~---~--~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~  308 (370)
T cd05596         266 LTF-P---D--DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFK  308 (370)
T ss_pred             CCC-C---C--cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccC
Confidence            000 0   0  0012345667889999999987  99999999998864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=3.8e-38  Score=320.41  Aligned_cols=252  Identities=27%  Similarity=0.458  Sum_probs=203.2

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|...+.||+|+||.||+|.+.+ +..+|+|.+.... ....++.+|+.++.+++||||++++++|......++||||+
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM   81 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence            457778899999999999998865 4569999886443 23467899999999999999999999999988999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++|+|.+++......+++.+++.++.||+.||.|||+   .+++|+||||+||++++++.+||+|||+++..........
T Consensus        82 ~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~  158 (256)
T cd05113          82 SNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS  158 (256)
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCceeec
Confidence            9999999997655678999999999999999999998   8999999999999999999999999999876543222222


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      ....++..|++||.+....++.++|||||||++|||++ |+.||......   ....    ...++....  .+   .  
T Consensus       159 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---~~~~----~~~~~~~~~--~~---~--  224 (256)
T cd05113         159 VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS---ETVE----KVSQGLRLY--RP---H--  224 (256)
T ss_pred             CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---HHHH----HHhcCCCCC--CC---C--
Confidence            22345678999999988889999999999999999998 99998744321   1111    111221110  01   1  


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        .....+.+++.+||+++|++||++.++++.|+
T Consensus       225 --~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         225 --LASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             --CCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence              12356788899999999999999999998874

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=3.4e-38  Score=338.85  Aligned_cols=267  Identities=24%  Similarity=0.321  Sum_probs=206.1

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC-----eEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK-----ELL  425 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~-----~~~  425 (645)
                      +|+..++||+|+||.||++.+..+++.||+|++...  .....+++.+|+++++.++|+||+++++++...+     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            477889999999999999999888999999998643  3345578889999999999999999999998776     789


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +|+||+. ++|.+.+.. ...+++..+..++.||+.||.|||+   .+++||||||+|||++.++.+||+|||+++....
T Consensus        81 lv~e~~~-~~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~  155 (372)
T cd07853          81 VVTELMQ-SDLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP  155 (372)
T ss_pred             EEeeccc-cCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence            9999996 577777643 4568999999999999999999998   8999999999999999999999999999986543


Q ss_pred             cCCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccc-----
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL-----  579 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~-----  579 (645)
                      ..........++..|+|||++.+. .++.++|||||||++|||++|+.||.......+.   +.+.+..+.....     
T Consensus       156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---~~i~~~~g~~~~~~~~~~  232 (372)
T cd07853         156 DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQL---DLITDLLGTPSLEAMRSA  232 (372)
T ss_pred             CccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHH---HHHHHHcCCCCHHHHHHh
Confidence            333333344678999999998764 4789999999999999999999999765432221   1111111110000     


Q ss_pred             ----------cccC-cccc--CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          580 ----------EAVD-PRLC--RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       580 ----------~~~d-~~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                                .... +...  ........+.+.+++.+||+.||++|||+.|++++.++..
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  293 (372)
T cd07853         233 CEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE  293 (372)
T ss_pred             hHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence                      0000 0000  0011112356778899999999999999999999988653

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-38  Score=341.03  Aligned_cols=257  Identities=22%  Similarity=0.313  Sum_probs=204.4

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|+||.||++++..+++.||||++...   .......+.+|+.++.+++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            4688899999999999999999999999999998643   2344567889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++... ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.+.....
T Consensus        81 E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  156 (364)
T cd05599          81 EYLPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR  156 (364)
T ss_pred             CCCCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence            999999999998654 468999999999999999999998   8999999999999999999999999999875432110


Q ss_pred             c-------------------------------------ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCC
Q 042831          509 S-------------------------------------QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR  551 (645)
Q Consensus       509 ~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~  551 (645)
                      .                                     ......||+.|+|||++....++.++|||||||++|||++|+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~  236 (364)
T cd05599         157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY  236 (364)
T ss_pred             ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence            0                                     011235899999999999989999999999999999999999


Q ss_pred             CCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHhccC
Q 042831          552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPS---IRQVIHVLNFE  626 (645)
Q Consensus       552 ~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~evl~~L~~~  626 (645)
                      .||......   .....   .. +..-.-.+...  ...    ...+.+++..|+. +|.+|++   ++|+++|.++.
T Consensus       237 ~Pf~~~~~~---~~~~~---i~-~~~~~~~~~~~--~~~----s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~  300 (364)
T cd05599         237 PPFCSDNPQ---ETYRK---II-NWKETLQFPDE--VPL----SPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFK  300 (364)
T ss_pred             CCCCCCCHH---HHHHH---HH-cCCCccCCCCC--CCC----CHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcC
Confidence            999754321   11111   11 11000000110  011    2345566677886 9999998   99999998864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=2.4e-38  Score=332.28  Aligned_cols=247  Identities=23%  Similarity=0.357  Sum_probs=196.7

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.||+|+||.||+|.+.++++.||+|.++..   .....+.+..|..++..+ +||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999999999999999998753   223344566677777654 799999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |+|..++... ..+++.....++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        81 g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~~  155 (316)
T cd05592          81 GDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKAST  155 (316)
T ss_pred             CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Ccccc
Confidence            9999888543 468999999999999999999998   899999999999999999999999999997543222 23344


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+.   .. ....      .+.+...    
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~---~~~---~~-i~~~------~~~~~~~----  218 (316)
T cd05592         156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED---ELF---DS-ILND------RPHFPRW----  218 (316)
T ss_pred             ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH---HHH---HH-HHcC------CCCCCCC----
Confidence            57899999999999888999999999999999999999999754321   111   11 1111      1111111    


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHH-HHHHHhccC
Q 042831          594 QIERLMIVGLWCAHPDENLRPSIR-QVIHVLNFE  626 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RPs~~-evl~~L~~~  626 (645)
                      ....+.+++.+||+.||++||++. +++++.++.
T Consensus       219 ~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~  252 (316)
T cd05592         219 ISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFR  252 (316)
T ss_pred             CCHHHHHHHHHHccCCHHHcCCChHHHHcCcccC
Confidence            223456788899999999999875 777776653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=4.9e-38  Score=320.00  Aligned_cols=253  Identities=25%  Similarity=0.479  Sum_probs=205.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|+..++||+|++|.||+|...+ +..||+|.+.... ...+.+.+|+.++.+++|+|++++++.+...+..++||||
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNN-STKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY   82 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecC-CceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence            4578889999999999999999764 5679999876433 3457889999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      +++++|.+++... ...+++..+..++.|+++||+|||+   .+++||||||+||+++.++.+||+|||+++........
T Consensus        83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~  159 (261)
T cd05072          83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT  159 (261)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence            9999999998653 4578999999999999999999998   89999999999999999999999999999866433222


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ......++..|+|||++..+.++.++|||||||++|||++ |+.||......   ....++    .++...    +. ..
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~~----~~~~~~----~~-~~  227 (261)
T cd05072         160 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS---DVMSAL----QRGYRM----PR-ME  227 (261)
T ss_pred             ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH---HHHHHH----HcCCCC----CC-CC
Confidence            2222345678999999988889999999999999999998 99999753321   122211    111110    11 11


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .    ....+.+++.+|++.+|++||+++++.+.|+
T Consensus       228 ~----~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  259 (261)
T cd05072         228 N----CPDELYDIMKTCWKEKAEERPTFDYLQSVLD  259 (261)
T ss_pred             C----CCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence            1    2245778899999999999999999999886

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.5e-38  Score=340.81  Aligned_cols=264  Identities=20%  Similarity=0.273  Sum_probs=206.7

Q ss_pred             HHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC
Q 042831          346 ELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK  422 (645)
Q Consensus       346 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~  422 (645)
                      ++....++|+..+.||+|+||.||++++..+++.+|+|.+...   .....+.+.+|+.+++.++||||+++++++.+++
T Consensus        37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~  116 (370)
T cd05621          37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK  116 (370)
T ss_pred             hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence            4445567899999999999999999999999999999998642   2233456789999999999999999999999999


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      ..++||||+++|+|.+++..  ..+++.....++.||+.||.|||+   .+|+||||||+|||+++++.+||+|||+++.
T Consensus       117 ~~~lv~Ey~~gg~L~~~l~~--~~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~  191 (370)
T cd05621         117 YLYMVMEYMPGGDLVNLMSN--YDVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMK  191 (370)
T ss_pred             EEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEeccccee
Confidence            99999999999999998854  357899999999999999999998   8999999999999999999999999999986


Q ss_pred             ccccCCcceeecccCccccCccccccC----CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcc
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATTG----KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL  578 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l  578 (645)
                      .............||+.|+|||++...    .++.++|||||||++|||++|+.||......   ...   .........
T Consensus       192 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~---~~~---~~i~~~~~~  265 (370)
T cd05621         192 MDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV---GTY---SKIMDHKNS  265 (370)
T ss_pred             cccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH---HHH---HHHHhCCcc
Confidence            643332233456799999999998654    3788999999999999999999999754321   111   111111100


Q ss_pred             ccccCccccCCCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHhccCC
Q 042831          579 LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENL--RPSIRQVIHVLNFEA  627 (645)
Q Consensus       579 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~~~~  627 (645)
                      ... .    .  .......+..++..|+..++.+  ||++.|+++|.++..
T Consensus       266 ~~~-p----~--~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~  309 (370)
T cd05621         266 LNF-P----E--DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN  309 (370)
T ss_pred             cCC-C----C--cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCC
Confidence            000 0    0  0112234556667788755543  899999999998753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=5e-38  Score=347.99  Aligned_cols=251  Identities=20%  Similarity=0.255  Sum_probs=205.7

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCC-CeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRET-NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      .|...+.||+|++|.||+|....+ ++.||+|.+..........+.+|+.+++.++||||++++++|..++..+|||||+
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            377889999999999999998776 7889999876665566667889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          432 PNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       432 ~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ++|+|.+++.+   ....+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.......
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~  224 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS  224 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence            99999998864   24468899999999999999999998   8999999999999999999999999999986543222


Q ss_pred             -cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          509 -SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       509 -~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                       .......||++|+|||++.+..++.++|||||||++|||++|+.||.....   ..+...    ...+...    + . 
T Consensus       225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~---~~~~~~----~~~~~~~----~-~-  291 (478)
T PTZ00267        225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ---REIMQQ----VLYGKYD----P-F-  291 (478)
T ss_pred             cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHH----HHhCCCC----C-C-
Confidence             123345699999999999999999999999999999999999999974332   111111    1111111    1 0 


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHV  622 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  622 (645)
                         +......+.+++..||+.||++||++++++.+
T Consensus       292 ---~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        292 ---PCPVSSGMKALLDPLLSKNPALRPTTQQLLHT  323 (478)
T ss_pred             ---CccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence               11122457788899999999999999999865

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1.3e-38  Score=335.72  Aligned_cols=248  Identities=26%  Similarity=0.369  Sum_probs=201.9

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNG  434 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~g  434 (645)
                      +.||+|+||.||++....+++.||+|.+...   .......+..|++++.+++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            4699999999999999999999999998753   2334567788999999999999999999999999999999999999


Q ss_pred             ChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeec
Q 042831          435 SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL  514 (645)
Q Consensus       435 sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~  514 (645)
                      +|..++.. ...+++..+..++.||+.||.|||+  ..+|+||||||+|||++.++.+||+|||+++..... .......
T Consensus        81 ~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~~~~~  156 (325)
T cd05594          81 ELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GATMKTF  156 (325)
T ss_pred             cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC-Ccccccc
Confidence            99888754 3468999999999999999999996  268999999999999999999999999998743221 1222345


Q ss_pred             ccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHH
Q 042831          515 AGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQ  594 (645)
Q Consensus       515 ~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~  594 (645)
                      .||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+..    ....+.      ..+....    
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~---~~~~----~i~~~~------~~~p~~~----  219 (325)
T cd05594         157 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFE----LILMEE------IRFPRTL----  219 (325)
T ss_pred             cCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH---HHHH----HHhcCC------CCCCCCC----
Confidence            6999999999999999999999999999999999999999754321   1111    111111      1111112    


Q ss_pred             HHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC
Q 042831          595 IERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE  626 (645)
Q Consensus       595 ~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~  626 (645)
                      ...+.+++.+||+.||++|+     +++++++|.++.
T Consensus       220 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~  256 (325)
T cd05594         220 SPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFA  256 (325)
T ss_pred             CHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcC
Confidence            23566788999999999996     999999998865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=2.8e-38  Score=333.00  Aligned_cols=250  Identities=24%  Similarity=0.376  Sum_probs=200.6

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHH---HhcCCCCccEEEeeeeeCCeEEEE
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKII---SRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l---~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      |...+.||+|+||.||+|.+..+++.||||+++..   .....+.+.+|+.++   ++++||||+++++++...+..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            55678999999999999999999999999998643   223345566666655   566899999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+++++|..++..  ..+++..+..++.||+.||.|||+   .+++||||||+||+++.++.+||+|||+++..... 
T Consensus        81 ~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~-  154 (324)
T cd05589          81 MEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF-  154 (324)
T ss_pred             EcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC-
Confidence            999999999888743  468999999999999999999998   89999999999999999999999999998743221 


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      ........|++.|+|||.+.+..++.++|||||||++|||++|+.||......   ....   . ...+..      ...
T Consensus       155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~---~~~~---~-i~~~~~------~~p  221 (324)
T cd05589         155 GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE---EVFD---S-IVNDEV------RYP  221 (324)
T ss_pred             CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH---HHHH---H-HHhCCC------CCC
Confidence            22233467899999999999989999999999999999999999999754321   1111   1 111111      111


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE  626 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~  626 (645)
                      ...    ...+.+++.+||+.||++||     ++.+++++.++.
T Consensus       222 ~~~----~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~  261 (324)
T cd05589         222 RFL----SREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFR  261 (324)
T ss_pred             CCC----CHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcC
Confidence            112    24567788999999999999     689999988764

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=4.3e-38  Score=324.70  Aligned_cols=262  Identities=27%  Similarity=0.401  Sum_probs=203.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEE----cCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeee--CCeEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFF----RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELL  425 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~----~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~--~~~~~  425 (645)
                      .+|...+.||+|+||.||++..    ..++..||+|.+........+.+.+|++++.+++||||+++++++..  ....+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            4677889999999999999985    34678999999987777777889999999999999999999998754  34689


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +|+||+++++|.+++.+....+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++....
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~  160 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ  160 (284)
T ss_pred             EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence            9999999999999997666679999999999999999999998   8999999999999999999999999999986543


Q ss_pred             cCCcce--eecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc---------hhHHHHHHHHhc
Q 042831          506 AKGSQT--TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ---------VSLLQWVWDLYG  574 (645)
Q Consensus       506 ~~~~~~--~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~---------~~l~~~~~~~~~  574 (645)
                      ......  ....++..|+|||++.+..++.++|||||||+++||++|..++........         ........+...
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd05081         161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLK  240 (284)
T ss_pred             CCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHh
Confidence            222111  112234569999999888899999999999999999998877543221000         000001111111


Q ss_pred             CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          575 NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       575 ~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .+.         ...........+.+++.+||+++|++|||++|+++.|+.
T Consensus       241 ~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05081         241 NNG---------RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA  282 (284)
T ss_pred             cCC---------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence            110         001111223467889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-38  Score=339.05  Aligned_cols=255  Identities=24%  Similarity=0.393  Sum_probs=211.6

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCe
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKE  423 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~  423 (645)
                      ....++|...++||+|.||+|+++..+.+++.+|||.++++   .+...+..+.|..++.... ||.|++++.+++.+++
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            44557899999999999999999999999999999999876   3456677888888888775 9999999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      +++||||+.||++..+  ++...+++....-++..|+.||.|||+   ++||+||||.+|||||.+|.+||+||||++..
T Consensus       444 l~fvmey~~Ggdm~~~--~~~~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~  518 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHH--IHTDVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCKEG  518 (694)
T ss_pred             EEEEEEecCCCcEEEE--EecccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEeccccccccc
Confidence            9999999999994333  355789999999999999999999999   99999999999999999999999999999854


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      - ..+..+..++||+.|||||++.+..|+.+.|.|||||+||||+.|+.||..+++++.   .+    -+..      .|
T Consensus       519 m-~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~---Fd----sI~~------d~  584 (694)
T KOG0694|consen  519 M-GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV---FD----SIVN------DE  584 (694)
T ss_pred             C-CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH---HH----HHhc------CC
Confidence            3 234467779999999999999999999999999999999999999999987654422   11    1111      11


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHhcc
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSI-----RQVIHVLNF  625 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~L~~  625 (645)
                      +.    ++.-...+.+.++.+++..+|++|--+     .+|.+|.-|
T Consensus       585 ~~----yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFF  627 (694)
T KOG0694|consen  585 VR----YPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFF  627 (694)
T ss_pred             CC----CCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCcc
Confidence            22    222233455667788999999999854     677777665

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.2e-38  Score=318.12  Aligned_cols=251  Identities=25%  Similarity=0.436  Sum_probs=201.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      .+|+..+.||+|+||.||+|.+.. +..+|+|.+.... ....++.+|++++.+++|+|++++++++...+..++||||+
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~-~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRG-KIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM   81 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecC-CccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence            357778999999999999998864 5679999886432 23457889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++++|.+++......+++..++.++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++..........
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~  158 (256)
T cd05059          82 ANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSS  158 (256)
T ss_pred             CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceeccccccccc
Confidence            9999999997666678999999999999999999998   8999999999999999999999999999876532211111


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      ....++..|+|||.+.+..++.++||||||+++|||++ |+.||......   .....    ...+.     ....    
T Consensus       159 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~----~~~~~-----~~~~----  222 (256)
T cd05059         159 QGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS---EVVES----VSAGY-----RLYR----  222 (256)
T ss_pred             CCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH---HHHHH----HHcCC-----cCCC----
Confidence            11223457999999998899999999999999999999 89999754322   11111    11110     1111    


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHh
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL  623 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  623 (645)
                      +......+.+++.+|++.+|++|||+.|+++.|
T Consensus       223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            111234678899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd01951 lectin_L-type legume lectins

Probab=100.00  E-value=1.9e-37  Score=308.13  Aligned_cols=197  Identities=30%  Similarity=0.453  Sum_probs=166.5

Q ss_pred             CCCeEEe-ecccCC-CCcEecCC-CCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCCCCeEEEEEccCCC
Q 042831           47 DDNITYE-RAYPDS-NRVIQLPA-NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGS  123 (645)
Q Consensus        47 ~~~~~~~-~a~~~~-~~~~~Lt~-~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~GlaF~l~p~~~  123 (645)
                      ..++.++ ||.+.. ++.|+||+ ..+++|+++|++||++|       ++|+|+|+|.|.... ..+||||||+|+|.+.
T Consensus        13 ~~~~~~~G~A~~~~~~~~l~Lt~~~~~~~G~~~~~~~i~~~-------~~F~~~F~f~i~~~~-~~~gdG~aF~l~~~~~   84 (223)
T cd01951          13 QSNWQLNGSATLTTDSGVLRLTPDTGNQAGSAWYKTPIDLS-------KDFTTTFKFYLGTKG-TNGADGIAFVLQNDPA   84 (223)
T ss_pred             hhhcEEcccEEecCCCCEEEECCCCCCcEEEEEECCcEecc-------CCEEEEEEEEEeCCC-CCCCCcEEEEEecCCC
Confidence            4578888 999854 89999999 67799999999999998       789999999999865 5679999999999875


Q ss_pred             CCCCCCCC--CcccCccCCCCCCCCCCEEEEEEecccCC--CCCCCCceeeecCCCccc-------ceeeecccCCCCce
Q 042831          124 KIPTNKGG--GSFGLTKDNEPLNSSIPFVAVEFDVYVNS--WDPTFSHVGIDINSVKSK-------KNVSWWSDVKSGRR  192 (645)
Q Consensus       124 ~~~~~~~g--~~lGl~~~~~~~~~~~~~vaVEfDt~~n~--~d~~~~hvgidvns~~s~-------~~~~~~~~~~~g~~  192 (645)
                      . +.+.+|  ++||..       ..++.+|||||||+|.  +||+.||||||+|+..+.       .+..++....+|+.
T Consensus        85 ~-~~~~~g~~~~lG~~-------~~~~~~aVefDT~~N~~~~dp~~~higi~~n~~~~~~~~~~~~~~~~~~~~~~~g~~  156 (223)
T cd01951          85 G-ALGGGGGGGGLGYG-------GIGNSVAVEFDTYKNDDNNDPNGNHISIDVNGNGNNTALATSLGSASLPNGTGLGNE  156 (223)
T ss_pred             C-ccccCCCCCccCcc-------ccCCeEEEEEeccccCCCCCCCCCEEEEEcCCCCCCcccccccceeeCCCccCCCCE
Confidence            4 344444  778853       3456799999999997  599999999999998753       33344333334999


Q ss_pred             eEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccceeeeEEEEEeeccC
Q 042831          193 NEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNS  261 (645)
Q Consensus       193 ~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~wsf~~  261 (645)
                      ++|||+||+.+++|+|+|.+...  |..++++.++||+..++++|||||+||||...+.|.|++|+|+.
T Consensus       157 ~~v~I~Y~~~~~~L~v~l~~~~~--~~~~~l~~~~~l~~~~~~~~yvGFTAsTG~~~~~h~V~~wsf~~  223 (223)
T cd01951         157 HTVRITYDPTTNTLTVYLDNGST--LTSLDITIPVDLIQLGPTKAYFGFTASTGGLTNLHDILNWSFTS  223 (223)
T ss_pred             EEEEEEEeCCCCEEEEEECCCCc--cccccEEEeeeecccCCCcEEEEEEcccCCCcceeEEEEEEecC
Confidence            99999999999999999987654  66789999999999999999999999999999999999999963

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely.

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-38  Score=301.84  Aligned_cols=263  Identities=23%  Similarity=0.268  Sum_probs=213.5

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC-----C
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK-----K  422 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~-----~  422 (645)
                      ....++|.+.++||+|||..||+++...++..+|+|++...+.++.+..++|++..++++||||+++++++..+     .
T Consensus        17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~   96 (302)
T KOG2345|consen   17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH   96 (302)
T ss_pred             EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence            34456788999999999999999998889999999999888888889999999999999999999999987543     3


Q ss_pred             eEEEEEEecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccC
Q 042831          423 ELLLVYEFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL  499 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGl  499 (645)
                      ..||+++|+..|+|.+.+..   .+..+++.+.+.|+.+|.+||.+||+. ..+++||||||.|||+.+.+.++|.|||.
T Consensus        97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS  175 (302)
T KOG2345|consen   97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGS  175 (302)
T ss_pred             eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccC
Confidence            58999999999999998864   456899999999999999999999982 33599999999999999999999999999


Q ss_pred             cccccccCCcc--------eeecccCccccCccccc---cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHH
Q 042831          500 ARLVEHAKGSQ--------TTVLAGTMGYMAPECAT---TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQW  568 (645)
Q Consensus       500 a~~~~~~~~~~--------~~~~~gt~~y~aPE~~~---~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~  568 (645)
                      +....-.....        ......|..|.|||.+.   +...++++|||||||+||+|+.|..||+...+.        
T Consensus       176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~--------  247 (302)
T KOG2345|consen  176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ--------  247 (302)
T ss_pred             ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc--------
Confidence            87553211111        11234688999999874   456899999999999999999999999743321        


Q ss_pred             HHHHhcCCcccccc-CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          569 VWDLYGNGKLLEAV-DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       569 ~~~~~~~~~l~~~~-d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                            .|.+.-++ .+.+.-.-+....+.+.+++.+|+++||.+||++.+++..++.
T Consensus       248 ------GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~  299 (302)
T KOG2345|consen  248 ------GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDD  299 (302)
T ss_pred             ------CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence                  22332222 2233222222356789999999999999999999999998763

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=5.6e-38  Score=322.88  Aligned_cols=256  Identities=29%  Similarity=0.460  Sum_probs=204.3

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcC-----CCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRE-----TNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE  423 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~  423 (645)
                      .+++|...+.||+|++|.||+|.+..     ++..|++|.+.... ......+..|+.++++++|+||+++++++.+.+.
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            35678889999999999999999976     67889999886543 3445679999999999999999999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhcC------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC---cEEE
Q 042831          424 LLLVYEFMPNGSLDSHLFKEN------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF---NAKI  494 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~---~~kl  494 (645)
                      .++||||+++++|.+++....      ..+++..+..++.||+.||.|||+   .+++||||||+||+++.++   .+||
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl  160 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKI  160 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEe
Confidence            999999999999999986543      258999999999999999999998   8999999999999998654   5999


Q ss_pred             eeccCcccccccCCcc-eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHH
Q 042831          495 GDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDL  572 (645)
Q Consensus       495 ~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~  572 (645)
                      +|||+++......... ......+..|+|||++.++.++.++|||||||++|||++ |+.||......   .+.+.+   
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~---~~~~~~---  234 (277)
T cd05036         161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ---EVMEFV---  234 (277)
T ss_pred             ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHH---
Confidence            9999998653221111 112233567999999998999999999999999999997 99999754332   111111   


Q ss_pred             hcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          573 YGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       573 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ......          ..+......+.+++.+|++.+|++||++.+|+++|.
T Consensus       235 ~~~~~~----------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         235 TGGGRL----------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HcCCcC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            111111          111112346778889999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=2.5e-37  Score=318.48  Aligned_cols=255  Identities=27%  Similarity=0.358  Sum_probs=204.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|...++||+|+||.||+|++..+++.||+|.+... .....+++.+|++++.+++|||++++++++...+..++||||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            3577788999999999999999888999999998655 334456789999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +++++|..+.     .+++.....++.|++.||.|||+   .+++|+||||+|||++.++.+||+|||++......   .
T Consensus        81 ~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---~  149 (279)
T cd06619          81 MDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---I  149 (279)
T ss_pred             CCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc---c
Confidence            9999996542     46888999999999999999998   99999999999999999999999999999755322   2


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCch-hHHHHHHHHhcCCccccccCccccCC
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQV-SLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~-~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      .....++..|+|||++.+..++.++||||||+++|||++|+.||......... ....+ .......     ..+.+.. 
T Consensus       150 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~-  222 (279)
T cd06619         150 AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL-LQCIVDE-----DPPVLPV-  222 (279)
T ss_pred             ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHH-HHHHhcc-----CCCCCCC-
Confidence            23356889999999999888999999999999999999999999753322111 01111 1111111     0111111 


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                        ......+.+++.+|++.+|++||+++|++++.+..
T Consensus       223 --~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~  257 (279)
T cd06619         223 --GQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIV  257 (279)
T ss_pred             --CcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccc
Confidence              11224567888999999999999999999998864

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=1e-37  Score=321.41  Aligned_cols=255  Identities=28%  Similarity=0.465  Sum_probs=203.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCe----EEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNS----YIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~----~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ++|...+.||+|+||.||+|.+..+++    .+++|.+.... .....++..|+..+.+++||||+++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence            467778999999999999999876665    47888775443 3345678889999999999999999998864 55788


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ++||+++|+|.+++......+++..+..++.||+.||.|||+   ++++||||||+||++++++.+||+|||+++.....
T Consensus        86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~  162 (279)
T cd05111          86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD  162 (279)
T ss_pred             EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence            999999999999998777789999999999999999999998   89999999999999999999999999999865432


Q ss_pred             CCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          507 KGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       507 ~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      ... ......++..|+|||.+.++.++.++|||||||++|||++ |+.||......   .+.    +...++...  ..+
T Consensus       163 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~---~~~----~~~~~~~~~--~~~  233 (279)
T cd05111         163 DKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH---EVP----DLLEKGERL--AQP  233 (279)
T ss_pred             CcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH---HHH----HHHHCCCcC--CCC
Confidence            221 2233456778999999998899999999999999999998 99999754322   111    112222211  111


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..   .    ...+..++.+|++.+|++|||+.|+++.|..-
T Consensus       234 ~~---~----~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~  268 (279)
T cd05111         234 QI---C----TIDVYMVMVKCWMIDENVRPTFKELANEFTRM  268 (279)
T ss_pred             CC---C----CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            11   1    13456678899999999999999999988753

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=4.5e-38  Score=331.31  Aligned_cols=247  Identities=24%  Similarity=0.359  Sum_probs=200.0

Q ss_pred             CccCcCCcEEEEEEEEc---CCCeEEEEEEeccC----ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          358 QKLGQGGFGGVYKGFFR---ETNSYIAVKRVSQG----SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~---~~~~~vavK~~~~~----~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++||+|+||.||+++..   .+++.||+|.+...    .......+.+|++++++++||||+++++++..++..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            67999999999999864   46789999998643    223345678899999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +++++|.+++... ..+++.....++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... ...
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~  156 (323)
T cd05584          82 LSGGELFMHLERE-GIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE-GTV  156 (323)
T ss_pred             CCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-CCc
Confidence            9999999988543 467888899999999999999998   89999999999999999999999999998743222 122


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      .....|++.|+|||++.+..++.++|||||||++|||++|+.||......   ...    .....+..  .+.    .. 
T Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~---~~~----~~~~~~~~--~~~----~~-  222 (323)
T cd05584         157 THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK---KTI----DKILKGKL--NLP----PY-  222 (323)
T ss_pred             ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH---HHH----HHHHcCCC--CCC----CC-
Confidence            33457899999999999888999999999999999999999999754321   111    11112211  111    11 


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE  626 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~  626 (645)
                         ....+.+++.+|++.||++||     ++++++++.++.
T Consensus       223 ---~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~  260 (323)
T cd05584         223 ---LTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFR  260 (323)
T ss_pred             ---CCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcC
Confidence               124567888999999999999     899999998764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=3.4e-38  Score=331.13  Aligned_cols=248  Identities=23%  Similarity=0.341  Sum_probs=199.2

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.||+|+||.||+|.+..+|+.||+|.++...   ....+.+..|..++..+ +|||++++++++.+++..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            46999999999999999999999999987532   23445667788888764 899999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |+|..++.. ...+++.+...++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..... ......
T Consensus        81 g~L~~~i~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~  155 (316)
T cd05620          81 GDLMFHIQD-KGRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG-DNRAST  155 (316)
T ss_pred             CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccC-CCceec
Confidence            999988854 3568999999999999999999998   89999999999999999999999999998743221 122344


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..||..|+|||++.+..++.++|||||||++|||++|+.||......   .+.    +....+      .+.+....   
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~---~~~----~~~~~~------~~~~~~~~---  219 (316)
T cd05620         156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED---ELF----ESIRVD------TPHYPRWI---  219 (316)
T ss_pred             cCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHH----HHHHhC------CCCCCCCC---
Confidence            67899999999999999999999999999999999999999754321   111    111111      11111111   


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCH-HHHHHHhccCC
Q 042831          594 QIERLMIVGLWCAHPDENLRPSI-RQVIHVLNFEA  627 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RPs~-~evl~~L~~~~  627 (645)
                       ...+.+++.+||+.||++||++ .++++|.++..
T Consensus       220 -~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~  253 (316)
T cd05620         220 -TKESKDILEKLFERDPTRRLGVVGNIRGHPFFKT  253 (316)
T ss_pred             -CHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCC
Confidence             2356678899999999999998 57887887653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=3.8e-38  Score=331.52  Aligned_cols=247  Identities=21%  Similarity=0.317  Sum_probs=201.2

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      ++||+|+||.||+|++..+++.||+|.+...   .....+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            4699999999999999999999999998753   233456677899998876 799999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |+|..++... ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~~~  155 (321)
T cd05591          81 GDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VTTTT  155 (321)
T ss_pred             CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCC-ccccc
Confidence            9999888543 568999999999999999999998   899999999999999999999999999987533221 22334


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..|+..|+|||++.+..++.++|||||||++|||++|+.||......   .+...    ...+..   ..+.   ..   
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~---~~~~~----i~~~~~---~~p~---~~---  219 (321)
T cd05591         156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED---DLFES----ILHDDV---LYPV---WL---  219 (321)
T ss_pred             cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH---HHHHH----HHcCCC---CCCC---CC---
Confidence            56899999999999889999999999999999999999999754421   11111    111111   0111   11   


Q ss_pred             HHHHHHHHHHHcCCCCCCCCC-------CHHHHHHHhccC
Q 042831          594 QIERLMIVGLWCAHPDENLRP-------SIRQVIHVLNFE  626 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RP-------s~~evl~~L~~~  626 (645)
                       ...+.+++..||+.||++||       ++++++++.++.
T Consensus       220 -~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~  258 (321)
T cd05591         220 -SKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFK  258 (321)
T ss_pred             -CHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccC
Confidence             23566788999999999999       999999998864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=3.8e-38  Score=331.42  Aligned_cols=247  Identities=23%  Similarity=0.375  Sum_probs=201.2

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.||+|+||.||+|++..+++.||+|++...   .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999999999999999998643   233456777899988876 699999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |+|..++... ..+++..+..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++..... ......
T Consensus        81 g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~-~~~~~~  155 (320)
T cd05590          81 GDLMFHIQKS-RRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN-GKTTST  155 (320)
T ss_pred             chHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC-CCcccc
Confidence            9999888544 468999999999999999999998   89999999999999999999999999998753221 122334


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+.    ....++...   .+   ..    
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~---~~~----~~i~~~~~~---~~---~~----  218 (320)
T cd05590         156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED---DLF----EAILNDEVV---YP---TW----  218 (320)
T ss_pred             cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH---HHH----HHHhcCCCC---CC---CC----
Confidence            57899999999999888999999999999999999999999754321   111    111122110   11   11    


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCH------HHHHHHhccC
Q 042831          594 QIERLMIVGLWCAHPDENLRPSI------RQVIHVLNFE  626 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~L~~~  626 (645)
                      ....+.+++.+||+.||++||++      +++++|.++.
T Consensus       219 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~  257 (320)
T cd05590         219 LSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFK  257 (320)
T ss_pred             CCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcC
Confidence            12356778899999999999998      8999998874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=8.3e-38  Score=321.51  Aligned_cols=256  Identities=27%  Similarity=0.456  Sum_probs=203.8

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcC-----CCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRE-----TNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE  423 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~  423 (645)
                      ..++|+..+.||+|+||.||+|.+.+     ++..||+|++.... .....++.+|+.++.+++|+||+++++++..++.
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            56789999999999999999998652     35679999886432 3445678999999999999999999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhcC---------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEE
Q 042831          424 LLLVYEFMPNGSLDSHLFKEN---------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKI  494 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl  494 (645)
                      .++||||+++++|.+++.+..         ..+++..+..++.|++.||.|||+   .+++|+||||+||++++++.+||
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEE
Confidence            999999999999999986422         246788999999999999999998   89999999999999999999999


Q ss_pred             eeccCcccccccCCcc-eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHH
Q 042831          495 GDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDL  572 (645)
Q Consensus       495 ~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~  572 (645)
                      +|||+++......... .....++..|+|||.+..+.++.++|||||||++|||++ |+.||......   ....    .
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~---~~~~----~  233 (277)
T cd05062         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE---QVLR----F  233 (277)
T ss_pred             CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHH----H
Confidence            9999987553322211 112345678999999998889999999999999999999 78888654321   1111    1


Q ss_pred             hcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          573 YGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       573 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ..++....     .    +......+.+++.+|++.+|++|||+.|+++.|+
T Consensus       234 ~~~~~~~~-----~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         234 VMEGGLLD-----K----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             HHcCCcCC-----C----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            11221111     1    1112346788999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=8.1e-38  Score=319.70  Aligned_cols=256  Identities=26%  Similarity=0.469  Sum_probs=206.6

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCe---EEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNS---YIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~---~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .++|+..+.||+|+||.||+|++..++.   .+++|.+... .....+++.+|++++.+++|+|++++.+++...+..++
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            4577888999999999999999875543   7999998755 34456788999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++++|.+++......+++.++..++.|++.||+|||+   .+++|+||||+||++++++.+||+|||++......
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~  160 (268)
T cd05063          84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD  160 (268)
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence            999999999999997766789999999999999999999998   89999999999999999999999999999765433


Q ss_pred             CCccee--ecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          507 KGSQTT--VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       507 ~~~~~~--~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ......  ....+..|+|||++....++.++|||||||++|||++ |+.||......   .+..    ...++..    .
T Consensus       161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~---~~~~----~i~~~~~----~  229 (268)
T cd05063         161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH---EVMK----AINDGFR----L  229 (268)
T ss_pred             cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH---HHHH----HHhcCCC----C
Confidence            222111  1223457999999988889999999999999999997 99999643321   1111    1111110    0


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      +     ...+....+.+++.+|++.+|++||++.+|++.|..
T Consensus       230 ~-----~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~  266 (268)
T cd05063         230 P-----APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK  266 (268)
T ss_pred             C-----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence            1     111223567889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=1e-37  Score=334.64  Aligned_cols=268  Identities=20%  Similarity=0.258  Sum_probs=210.5

Q ss_pred             cChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeee
Q 042831          342 FPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWC  418 (645)
Q Consensus       342 ~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~  418 (645)
                      ..+.++....++|...+.||+|+||.||++++..+++.+|+|.+...   .....+.+.+|+.++..++||||+++++++
T Consensus        33 ~~~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~  112 (371)
T cd05622          33 NKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF  112 (371)
T ss_pred             hHHhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            34566777789999999999999999999999999999999998642   223445678899999999999999999999


Q ss_pred             eeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeecc
Q 042831          419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG  498 (645)
Q Consensus       419 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfG  498 (645)
                      .+++..++||||+++|+|.+++..  ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||
T Consensus       113 ~~~~~~~lv~Ey~~gg~L~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG  187 (371)
T cd05622         113 QDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFG  187 (371)
T ss_pred             EcCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCC
Confidence            999999999999999999998854  357888999999999999999998   999999999999999999999999999


Q ss_pred             CcccccccCCcceeecccCccccCccccccC----CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc
Q 042831          499 LARLVEHAKGSQTTVLAGTMGYMAPECATTG----KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG  574 (645)
Q Consensus       499 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~  574 (645)
                      +++..............||+.|+|||++...    .++.++|||||||++|||++|+.||......      ........
T Consensus       188 ~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~  261 (371)
T cd05622         188 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMN  261 (371)
T ss_pred             ceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH------HHHHHHHc
Confidence            9986643332233456799999999998653    3789999999999999999999999754321      11111111


Q ss_pred             CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHhccCC
Q 042831          575 NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENL--RPSIRQVIHVLNFEA  627 (645)
Q Consensus       575 ~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~~~~  627 (645)
                      ........+.   .    .....+..++..|+..++.+  ||+++|+++|+++..
T Consensus       262 ~~~~~~~~~~---~----~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~  309 (371)
T cd05622         262 HKNSLTFPDD---N----DISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN  309 (371)
T ss_pred             CCCcccCCCc---C----CCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCC
Confidence            1111111110   1    12345566778899744433  789999999998743

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=1.4e-37  Score=317.71  Aligned_cols=256  Identities=25%  Similarity=0.367  Sum_probs=205.4

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|...+.||+|+||.||+|+...+++.||+|++..........+.+|+.++.+++|||++++++++..++..++|+||+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~   88 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC   88 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence            46888999999999999999998889999999987655555667889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++++|.+++.. ...+++..+..++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||++........ ..
T Consensus        89 ~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~-~~  163 (267)
T cd06646          89 GGGSLQDIYHV-TGPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA-KR  163 (267)
T ss_pred             CCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeeccccc-cc
Confidence            99999998854 3468999999999999999999998   8999999999999999999999999999986543221 12


Q ss_pred             eecccCccccCccccc---cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          512 TVLAGTMGYMAPECAT---TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~---~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ....++..|+|||.+.   ...++.++|||||||+++||++|+.||....+......       ......   ..+....
T Consensus       164 ~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~-------~~~~~~---~~~~~~~  233 (267)
T cd06646         164 KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL-------MSKSNF---QPPKLKD  233 (267)
T ss_pred             CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhee-------eecCCC---CCCCCcc
Confidence            2346788999999874   34578899999999999999999999864332111000       000110   0111110


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        .......+.+++.+||+.+|++||++++++++|+
T Consensus       234 --~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         234 --KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             --ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence              1122356778899999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=9e-38  Score=323.31  Aligned_cols=256  Identities=28%  Similarity=0.483  Sum_probs=206.9

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEc-----CCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      .++|...+.||+|+||.||++...     .++..+|+|.+........+.+.+|++++.+++|||++++++++...+..+
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   83 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            357888999999999999999852     345679999987766666788999999999999999999999999999999


Q ss_pred             EEEEecCCCChhhhhhhcC------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEE
Q 042831          426 LVYEFMPNGSLDSHLFKEN------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK  493 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~k  493 (645)
                      +||||+++++|.+++....            ..+++.++..++.|++.||.|||+   .+++||||||+||++++++.+|
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~k  160 (288)
T cd05093          84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVK  160 (288)
T ss_pred             EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEE
Confidence            9999999999999886432            258999999999999999999998   8999999999999999999999


Q ss_pred             EeeccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHH
Q 042831          494 IGDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWD  571 (645)
Q Consensus       494 l~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~  571 (645)
                      |+|||+++....... .......++..|+|||.+.+..++.++|||||||+++||++ |+.||......   ...    .
T Consensus       161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~---~~~----~  233 (288)
T cd05093         161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN---EVI----E  233 (288)
T ss_pred             eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHH----H
Confidence            999999975532221 11122335678999999998889999999999999999998 89998644321   111    1


Q ss_pred             HhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          572 LYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       572 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....+....     ....+    ...+.+++.+|+++||.+|||++++++.|+.
T Consensus       234 ~i~~~~~~~-----~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~  278 (288)
T cd05093         234 CITQGRVLQ-----RPRTC----PKEVYDLMLGCWQREPHMRLNIKEIHSLLQN  278 (288)
T ss_pred             HHHcCCcCC-----CCCCC----CHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence            222222211     11112    2457889999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=2.1e-37  Score=323.98  Aligned_cols=263  Identities=25%  Similarity=0.357  Sum_probs=207.9

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|...+.||+|+||.||++.+..++..+|+|.+... ......++.+|++++.+++||||+++++.|..++..++||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            3688899999999999999999999999999998754 334456788999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +++++|.+++... ..+++..+..++.|+++||.|||+  ..+++|+||||+|||++.++.+||+|||++......   .
T Consensus        81 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---~  154 (308)
T cd06615          81 MDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---M  154 (308)
T ss_pred             cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCccccccc---c
Confidence            9999999998654 568999999999999999999997  258999999999999999999999999998754322   1


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccc-----------
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL-----------  579 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~-----------  579 (645)
                      .....++..|+|||++.+..++.++|+||||+++|||++|+.||.......   ...+...........           
T Consensus       155 ~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (308)
T cd06615         155 ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE---LEAMFGRPVSEGEAKESHRPVSGHPP  231 (308)
T ss_pred             cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh---HHHhhcCccccccccCCcccccCCCC
Confidence            233568899999999988889999999999999999999999986433211   111110000000000           


Q ss_pred             ----------------cccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          580 ----------------EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       580 ----------------~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                                      ....+.+..   ......+.+++.+|++.+|++||+++|++++.++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~  291 (308)
T cd06615         232 DSPRPMAIFELLDYIVNEPPPKLPS---GAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIK  291 (308)
T ss_pred             CccchhhHHHHHHHHhcCCCccCcC---cccCHHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence                            000000000   01223577889999999999999999999999875

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1.5e-37  Score=320.03  Aligned_cols=258  Identities=25%  Similarity=0.323  Sum_probs=201.4

Q ss_pred             cCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCCh
Q 042831          360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL  436 (645)
Q Consensus       360 LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL  436 (645)
                      ||+|+||.||++....+|+.+|+|++....   ....+.+..|++++.+++||||+++++++..+...++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            799999999999999999999999986431   22334566799999999999999999999999999999999999999


Q ss_pred             hhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeecc
Q 042831          437 DSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA  515 (645)
Q Consensus       437 ~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~  515 (645)
                      .+++... ...+++..+..++.|++.||.|||+   .+++||||||+||+++.++.++|+|||++......  .......
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~--~~~~~~~  155 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG--KTITQRA  155 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC--ceeeccC
Confidence            9888653 3468999999999999999999998   99999999999999999999999999998765432  2223456


Q ss_pred             cCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHH
Q 042831          516 GTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQI  595 (645)
Q Consensus       516 gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~  595 (645)
                      |+..|+|||++.+..++.++|||||||++|||++|+.||.........  .+...... .+..    ... ...    ..
T Consensus       156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~--~~~~~~~~-~~~~----~~~-~~~----~~  223 (277)
T cd05607         156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK--EELKRRTL-EDEV----KFE-HQN----FT  223 (277)
T ss_pred             CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhH--HHHHHHhh-cccc----ccc-ccc----CC
Confidence            899999999999888999999999999999999999999754322111  11111111 1111    100 011    22


Q ss_pred             HHHHHHHHHcCCCCCCCCCCH----HHHHHHhccCC-CCCCCCC
Q 042831          596 ERLMIVGLWCAHPDENLRPSI----RQVIHVLNFEA-PLPALPP  634 (645)
Q Consensus       596 ~~l~~l~~~Cl~~dP~~RPs~----~evl~~L~~~~-~~p~~p~  634 (645)
                      ..+.+++.+||+.||++||++    ++++.|.++.. ..|.+..
T Consensus       224 ~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~~~~  267 (277)
T cd05607         224 EESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLEA  267 (277)
T ss_pred             HHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHHHhc
Confidence            356788899999999999999    55667777643 3344443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.1e-37  Score=330.77  Aligned_cols=266  Identities=20%  Similarity=0.243  Sum_probs=200.4

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ....+|...+.||+|+||.||+|+...+++.||+|.....      ....|+.++.+++|+||+++++++...+..++|+
T Consensus        63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  136 (357)
T PHA03209         63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL  136 (357)
T ss_pred             hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence            3456899999999999999999999988999999975432      2346999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+ .++|.+++......+++..+..|+.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....  
T Consensus       137 e~~-~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--  210 (357)
T PHA03209        137 PHY-SSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--  210 (357)
T ss_pred             Ecc-CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCccccccccC--
Confidence            999 568888887777789999999999999999999998   89999999999999999999999999999753221  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHH----HHHHHHhcC-C----ccc
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL----QWVWDLYGN-G----KLL  579 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~----~~~~~~~~~-~----~l~  579 (645)
                      .......||..|+|||++.+..++.++|||||||++|||+++..|+....+.......    ..+...... +    .+.
T Consensus       211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  290 (357)
T PHA03209        211 PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFP  290 (357)
T ss_pred             cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcC
Confidence            2223456899999999999999999999999999999999865554322221111000    001111000 0    000


Q ss_pred             ---------cccCc--cccCCCC-------HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          580 ---------EAVDP--RLCRDFD-------GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       580 ---------~~~d~--~l~~~~~-------~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                               ..++.  .....+.       ......+..++.+||+.||++|||+.|+++|.++.
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~  355 (357)
T PHA03209        291 RDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFA  355 (357)
T ss_pred             CCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhc
Confidence                     00000  0000000       00112344578999999999999999999998875

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.8e-37  Score=322.62  Aligned_cols=257  Identities=23%  Similarity=0.359  Sum_probs=210.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      .+|+..+.||+|++|.||+|+...+++.|++|.+........+.+.+|+.++++++|+|++++++.+..+...++||||+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            47888899999999999999998889999999997665556678899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++++|.+++.+  ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........ ..
T Consensus       100 ~~~~L~~~~~~--~~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~-~~  173 (296)
T cd06654         100 AGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KR  173 (296)
T ss_pred             CCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhcccccc-cc
Confidence            99999998853  357899999999999999999998   8999999999999999999999999999875433221 12


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ....++..|+|||.+.+...+.++|||||||++|||++|+.||........     + ......+.      +.+  ...
T Consensus       174 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-----~-~~~~~~~~------~~~--~~~  239 (296)
T cd06654         174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-----L-YLIATNGT------PEL--QNP  239 (296)
T ss_pred             CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-----H-HHHhcCCC------CCC--CCc
Confidence            234688899999999888899999999999999999999999975433211     1 11111110      001  011


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          592 GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      ......+.+++.+|+..+|++||++.+++++.+....
T Consensus       240 ~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             cccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence            1223457788899999999999999999999887644

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=1e-37  Score=319.55  Aligned_cols=257  Identities=26%  Similarity=0.406  Sum_probs=204.9

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeC------
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEK------  421 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~------  421 (645)
                      .+++.|+..+.||+|+||.||+|....+++.||+|++.... ....++.+|+.++.++ +|+|++++++++...      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            46678888999999999999999999999999999986543 3346788999999998 699999999998753      


Q ss_pred             CeEEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCc
Q 042831          422 KELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA  500 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla  500 (645)
                      ...++||||+++++|.+++... ...+++..+..++.|++.||+|||+   .+++|+||||+||++++++.+||+|||++
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~~  158 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVS  158 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCCc
Confidence            4689999999999999998764 4578999999999999999999998   89999999999999999999999999999


Q ss_pred             ccccccCCcceeecccCccccCccccc-----cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC
Q 042831          501 RLVEHAKGSQTTVLAGTMGYMAPECAT-----TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN  575 (645)
Q Consensus       501 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~  575 (645)
                      ....... .......|+..|+|||++.     ...++.++|||||||++|||++|+.||........     . .... .
T Consensus       159 ~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~-----~-~~~~-~  230 (272)
T cd06637         159 AQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-----L-FLIP-R  230 (272)
T ss_pred             eeccccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH-----H-HHHh-c
Confidence            7654322 2233456889999999886     33578899999999999999999999964332111     0 0001 1


Q ss_pred             CccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          576 GKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       576 ~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..     .+.+..   ......+.+++.+||+.+|.+|||+.|++++.|+
T Consensus       231 ~~-----~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         231 NP-----APRLKS---KKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             CC-----CCCCCC---CCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            11     111111   1122456788899999999999999999998764

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8e-38  Score=336.56  Aligned_cols=257  Identities=21%  Similarity=0.277  Sum_probs=201.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...++||+|+||.||++....+++.||||++...   .....+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            4688899999999999999999999999999998643   2334567889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++.. ...+++.....++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.+.....
T Consensus        81 E~~~gg~L~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~  156 (377)
T cd05629          81 EFLPGGDLMTMLIK-YDTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD  156 (377)
T ss_pred             eCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence            99999999998864 3568899999999999999999998   8999999999999999999999999999863321000


Q ss_pred             c----------------------------------------------ceeecccCccccCccccccCCCCcchhHHHHHH
Q 042831          509 S----------------------------------------------QTTVLAGTMGYMAPECATTGKASKESDVYSFGI  542 (645)
Q Consensus       509 ~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGv  542 (645)
                      .                                              ......||+.|+|||++.+..++.++|||||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv  236 (377)
T cd05629         157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA  236 (377)
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence            0                                              001246899999999999889999999999999


Q ss_pred             HHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCC---CCCHHHH
Q 042831          543 VALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENL---RPSIRQV  619 (645)
Q Consensus       543 ll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~---RPs~~ev  619 (645)
                      ++|||++|+.||......+   ...   ...........  +.. ...    ...+.+++.+|++ +|.+   ||++.|+
T Consensus       237 il~elltG~~Pf~~~~~~~---~~~---~i~~~~~~~~~--p~~-~~~----s~~~~dli~~lL~-~~~~r~~r~~~~~~  302 (377)
T cd05629         237 IMFECLIGWPPFCSENSHE---TYR---KIINWRETLYF--PDD-IHL----SVEAEDLIRRLIT-NAENRLGRGGAHEI  302 (377)
T ss_pred             hhhhhhcCCCCCCCCCHHH---HHH---HHHccCCccCC--CCC-CCC----CHHHHHHHHHHhc-CHhhcCCCCCHHHH
Confidence            9999999999997543211   111   11110000000  100 011    2345667778887 6665   4699999


Q ss_pred             HHHhccC
Q 042831          620 IHVLNFE  626 (645)
Q Consensus       620 l~~L~~~  626 (645)
                      +++.++.
T Consensus       303 l~hp~~~  309 (377)
T cd05629         303 KSHPFFR  309 (377)
T ss_pred             hcCCCcC
Confidence            9999865

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=8.1e-38  Score=328.29  Aligned_cols=247  Identities=24%  Similarity=0.366  Sum_probs=198.6

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.||+|+||.||+|.+..+++.||+|.++...   ....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            46999999999999999999999999987542   23345667788888764 899999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |+|.+++.. ...+++.....++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++..... ......
T Consensus        81 g~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~  155 (316)
T cd05619          81 GDLMFHIQS-CHKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG-DAKTCT  155 (316)
T ss_pred             CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC-CCceee
Confidence            999998854 3568999999999999999999998   89999999999999999999999999998743221 122344


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..||..|+|||++.+..++.++|||||||++|||++|+.||......   .+...    ...+      .+.+...    
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~---~~~~~----i~~~------~~~~~~~----  218 (316)
T cd05619         156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE---ELFQS----IRMD------NPCYPRW----  218 (316)
T ss_pred             ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH---HHHHH----HHhC------CCCCCcc----
Confidence            57899999999999889999999999999999999999999754321   11211    1111      1111111    


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHH-HHHHHhccC
Q 042831          594 QIERLMIVGLWCAHPDENLRPSIR-QVIHVLNFE  626 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RPs~~-evl~~L~~~  626 (645)
                      ....+.+++.+|++.||++||++. +++++.++.
T Consensus       219 ~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~  252 (316)
T cd05619         219 LTREAKDILVKLFVREPERRLGVKGDIRQHPFFR  252 (316)
T ss_pred             CCHHHHHHHHHHhccCHhhcCCChHHHHcCcccC
Confidence            123466788999999999999997 888877653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=5.4e-38  Score=330.65  Aligned_cols=252  Identities=23%  Similarity=0.332  Sum_probs=203.0

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      +|...+.||+|+||.||+|++..+++.||+|.+....   ....+.+..|..++..+ +|++|+++++++...+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            4778899999999999999999999999999987542   23345667788888877 5899999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++... ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... .
T Consensus        81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~-~  155 (323)
T cd05616          81 EYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD-G  155 (323)
T ss_pred             cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCCC-C
Confidence            999999999888543 468999999999999999999998   89999999999999999999999999998753321 1


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      .......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+...+    .++..      .+  
T Consensus       156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~---~~~~~i----~~~~~------~~--  220 (323)
T cd05616         156 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---ELFQSI----MEHNV------AY--  220 (323)
T ss_pred             CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH---HHHHHH----HhCCC------CC--
Confidence            2233457899999999999999999999999999999999999999754321   222211    11111      11  


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPS-----IRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~~  626 (645)
                        +......+..++.+|++.||++|++     .++++++.++.
T Consensus       221 --p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~  261 (323)
T cd05616         221 --PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFR  261 (323)
T ss_pred             --CCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcC
Confidence              1112345678889999999999997     47888876653

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=1.6e-37  Score=327.62  Aligned_cols=254  Identities=21%  Similarity=0.325  Sum_probs=204.9

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.||+|+||.||++....+++.||+|+++..   .....+.+..|+.++.++ +||||+++++++...+.+++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4699999999999999999999999999754   233456788999999888 599999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |+|..++... ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... ......
T Consensus        81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~  155 (327)
T cd05617          81 GDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP-GDTTST  155 (327)
T ss_pred             CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCC-CCceec
Confidence            9998887543 468999999999999999999998   89999999999999999999999999998743221 122344


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||............++..........      .+....   
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------~~p~~~---  226 (327)
T cd05617         156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI------RIPRFL---  226 (327)
T ss_pred             ccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC------CCCCCC---
Confidence            67999999999999999999999999999999999999999754333222233333333322211      111111   


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCC------HHHHHHHhccC
Q 042831          594 QIERLMIVGLWCAHPDENLRPS------IRQVIHVLNFE  626 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RPs------~~evl~~L~~~  626 (645)
                       ...+..++.+||+.||++||+      ++++++|.++.
T Consensus       227 -~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~  264 (327)
T cd05617         227 -SVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFR  264 (327)
T ss_pred             -CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCC
Confidence             234567889999999999998      57999998764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=2e-37  Score=314.08  Aligned_cols=253  Identities=28%  Similarity=0.401  Sum_probs=209.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|+..+.||+|+||.||+|....+++.+++|.+.....  .+++.+|++++++++|+|++++++++......++++||+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            578889999999999999999998889999999865433  678999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++++|.+++......+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|||++........ ..
T Consensus        81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~  156 (256)
T cd06612          81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-KR  156 (256)
T ss_pred             CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCcc-cc
Confidence            9999999997767789999999999999999999998   8999999999999999999999999999886543321 22


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ....++..|+|||++.+..++.++||||||+++|||++|+.||..........       ....     ...+.+.  .+
T Consensus       157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~-------~~~~-----~~~~~~~--~~  222 (256)
T cd06612         157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF-------MIPN-----KPPPTLS--DP  222 (256)
T ss_pred             ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh-------hhcc-----CCCCCCC--ch
Confidence            33457889999999988889999999999999999999999997543321110       0000     0001110  11


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          592 GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ......+.+++.+|++.+|++|||+.|++++.+
T Consensus       223 ~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~  255 (256)
T cd06612         223 EKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPF  255 (256)
T ss_pred             hhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCC
Confidence            122346778889999999999999999998765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=4.8e-38  Score=319.21  Aligned_cols=257  Identities=32%  Similarity=0.473  Sum_probs=206.4

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhH--HHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~--~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      |+..+.||+|+||+||+++...+++.+|+|.+........  ....+|+.++.+++||||+++++++......++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            4557899999999999999999999999999987654332  23456999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++++|.+++. ....+++..++.++.|+++||.+||+   .+++|+||||+||++++++.++|+|||.+... .......
T Consensus        81 ~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~-~~~~~~~  155 (260)
T PF00069_consen   81 PGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKL-SENNENF  155 (260)
T ss_dssp             TTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEES-TSTTSEB
T ss_pred             cccccccccc-cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc-ccccccc
Confidence            9999999996 44668999999999999999999999   89999999999999999999999999998754 2223344


Q ss_pred             eecccCccccCccccc-cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          512 TVLAGTMGYMAPECAT-TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~-~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      ....++..|+|||++. ....+.++||||+|+++++|++|+.||......+.........    .....    .....  
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~----~~~~~----~~~~~--  225 (260)
T PF00069_consen  156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKIL----KRPLP----SSSQQ--  225 (260)
T ss_dssp             SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHH----HTHHH----HHTTS--
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcc----ccccc----ccccc--
Confidence            4567899999999998 7889999999999999999999999998552111111111110    00000    00000  


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .......+.+++..||+.||++||++.+++++.|+
T Consensus       226 ~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  226 SREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             cchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence            00012678888999999999999999999998774

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.4e-38  Score=332.43  Aligned_cols=252  Identities=23%  Similarity=0.357  Sum_probs=214.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe-EEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE-LLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~-~~lV~  428 (645)
                      ++|...+++|+|+||.+++.+++.++..+++|.+...  .....+...+|+.++++++|||||.+.+.+.+++. .+|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            5678889999999999999999999999999988654  34445578899999999999999999999998888 99999


Q ss_pred             EecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          429 EFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      +||+||+|.+.+.+.+ ..++++.++.++.|++.|+.|||+   ..|+|||||+.||+++.+..+||+|||+|+.+....
T Consensus        84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~  160 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED  160 (426)
T ss_pred             eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence            9999999999998655 678999999999999999999997   899999999999999999999999999999876544


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                       .......||+.||.||.+.+.+|..|+|||||||++|||++-+++|...+-.   .++..+..    +         ..
T Consensus       161 -~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~---~Li~ki~~----~---------~~  223 (426)
T KOG0589|consen  161 -SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS---ELILKINR----G---------LY  223 (426)
T ss_pred             -hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH---HHHHHHhh----c---------cC
Confidence             3445578999999999999999999999999999999999999999865432   23322111    1         11


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHh
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL  623 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  623 (645)
                      ...+......+..++..|+..+|+.||++.++|.+.
T Consensus       224 ~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P  259 (426)
T KOG0589|consen  224 SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRP  259 (426)
T ss_pred             CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhCh
Confidence            222334456677788999999999999999999874

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=1.3e-37  Score=320.04  Aligned_cols=255  Identities=28%  Similarity=0.476  Sum_probs=206.0

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcC-----CCeEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRE-----TNSYIAVKRVSQGSKQ-GIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~  424 (645)
                      ..+|...+.||+|+||.||+|.+.+     ++..||+|.++..... ..+.+.+|++++.+++|+|++++++++...+..
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   83 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP   83 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence            3467788999999999999998753     3578999998765443 567899999999999999999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhcC-------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc
Q 042831          425 LLVYEFMPNGSLDSHLFKEN-------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN  491 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~-------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~  491 (645)
                      ++||||+++++|.+++...+             ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~  160 (280)
T cd05049          84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLV  160 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCe
Confidence            99999999999999986432             357899999999999999999998   89999999999999999999


Q ss_pred             EEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHH
Q 042831          492 AKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWV  569 (645)
Q Consensus       492 ~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~  569 (645)
                      +||+|||+++........ ......++..|+|||++..+.++.++|||||||++|||++ |+.||......   ...+. 
T Consensus       161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~---~~~~~-  236 (280)
T cd05049         161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE---EVIEC-  236 (280)
T ss_pred             EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH---HHHHH-
Confidence            999999998754322211 1122345678999999999999999999999999999998 99998654322   12222 


Q ss_pred             HHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          570 WDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       570 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                         ...+.....         +......+.+++..||+.||++||++.|+++.|+
T Consensus       237 ---~~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         237 ---ITQGRLLQR---------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             ---HHcCCcCCC---------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence               112222111         1112346778899999999999999999999885

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=6.8e-38  Score=331.77  Aligned_cols=257  Identities=27%  Similarity=0.397  Sum_probs=203.0

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcC-----CCeEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeC-C
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRE-----TNSYIAVKRVSQGS-KQGIKEYASEVKIISRL-RHRNLVQLLGWCHEK-K  422 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~-~  422 (645)
                      .++|...+.||+|+||.||+|...+     +++.||+|+++... ....+.+..|++++.++ +|+||++++++|... .
T Consensus         6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~   85 (337)
T cd05054           6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG   85 (337)
T ss_pred             HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence            4578889999999999999997543     35789999987543 33456788999999999 799999999988654 5


Q ss_pred             eEEEEEEecCCCChhhhhhhcC----------------------------------------------------------
Q 042831          423 ELLLVYEFMPNGSLDSHLFKEN----------------------------------------------------------  444 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~----------------------------------------------------------  444 (645)
                      .+++++||+++++|.+++....                                                          
T Consensus        86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (337)
T cd05054          86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL  165 (337)
T ss_pred             CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence            7889999999999998885321                                                          


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc-ceeecccCcccc
Q 042831          445 --SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYM  521 (645)
Q Consensus       445 --~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~  521 (645)
                        ..++|..+..++.||+.||.|||+   .+|+||||||+|||+++++.+||+|||+++.+...... ......++..|+
T Consensus       166 ~~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~  242 (337)
T cd05054         166 YKEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM  242 (337)
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence              268999999999999999999998   89999999999999999999999999999865432221 122234567899


Q ss_pred             CccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHH
Q 042831          522 APECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI  600 (645)
Q Consensus       522 aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~  600 (645)
                      |||++.+..++.++|||||||++|||++ |+.||......+  .    ......++...     .    .+......+.+
T Consensus       243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~--~----~~~~~~~~~~~-----~----~~~~~~~~~~~  307 (337)
T cd05054         243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE--E----FCRRLKEGTRM-----R----APEYATPEIYS  307 (337)
T ss_pred             CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH--H----HHHHHhccCCC-----C----CCccCCHHHHH
Confidence            9999999999999999999999999998 999997543221  1    11111222111     0    11122356788


Q ss_pred             HHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          601 VGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       601 l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ++++||+.+|++||++.|++++|..
T Consensus       308 l~~~cl~~~p~~RPs~~ell~~l~~  332 (337)
T cd05054         308 IMLDCWHNNPEDRPTFSELVEILGD  332 (337)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHH
Confidence            8999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=2.8e-37  Score=320.23  Aligned_cols=258  Identities=24%  Similarity=0.365  Sum_probs=210.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      +.|...++||+|+||.||+|.+..+++.+++|.+........+.+.+|+.++++++|+|++++++.+..++..++||||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            56788899999999999999999989999999998777777888999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++++|..++.+....+++..+..++.|++.+|.|||+   .+++||||||+||+++.++.+||+|||++....... ...
T Consensus        92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~~~  167 (292)
T cd06644          92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL-QRR  167 (292)
T ss_pred             CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceeccccc-ccc
Confidence            9999998887666779999999999999999999998   899999999999999999999999999987543221 222


Q ss_pred             eecccCccccCccccc-----cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          512 TVLAGTMGYMAPECAT-----TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~-----~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                      ....++..|+|||++.     ...++.++|||||||++|||++|+.||......      ...... ....     .+.+
T Consensus       168 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~------~~~~~~-~~~~-----~~~~  235 (292)
T cd06644         168 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM------RVLLKI-AKSE-----PPTL  235 (292)
T ss_pred             ceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH------HHHHHH-hcCC-----CccC
Confidence            3456788999999884     345688999999999999999999999653321      111111 1111     1111


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      .  .+......+..++.+||+.+|++||++++++++.++..
T Consensus       236 ~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~  274 (292)
T cd06644         236 S--QPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS  274 (292)
T ss_pred             C--CCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence            0  01122345677889999999999999999999988754

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=1.2e-37  Score=344.44  Aligned_cols=284  Identities=21%  Similarity=0.291  Sum_probs=208.3

Q ss_pred             HHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCC------CCccEEEeeee
Q 042831          346 ELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH------RNLVQLLGWCH  419 (645)
Q Consensus       346 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H------~nlv~l~~~~~  419 (645)
                      ++...+++|...++||+|+||.||+|.+..+++.||||+++... ...+++..|+.++.+++|      .+++++++++.
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~  201 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ  201 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence            34445678999999999999999999999889999999986432 234456678888877765      45888999887


Q ss_pred             eC-CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC--------
Q 042831          420 EK-KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF--------  490 (645)
Q Consensus       420 ~~-~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~--------  490 (645)
                      .+ ++.|+|||++ +++|.+++.+. ..+++..+..|+.||+.||.|||+  +.+|+||||||+|||++.++        
T Consensus       202 ~~~~~~~iv~~~~-g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NILl~~~~~~~~~~~~  277 (467)
T PTZ00284        202 NETGHMCIVMPKY-GPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENILMETSDTVVDPVTN  277 (467)
T ss_pred             cCCceEEEEEecc-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEEEecCCcccccccc
Confidence            54 5789999998 77888887544 568999999999999999999997  24899999999999998765        


Q ss_pred             --------cEEEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc
Q 042831          491 --------NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ  562 (645)
Q Consensus       491 --------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~  562 (645)
                              .+||+|||.+.....    ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.
T Consensus       278 ~~~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~  353 (467)
T PTZ00284        278 RALPPDPCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEH  353 (467)
T ss_pred             cccCCCCceEEECCCCccccCcc----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence                    499999998754321    22346799999999999999999999999999999999999999976543322


Q ss_pred             hhHHHHHH-----------------HHhc-CCccccccCccc----cCC---CCHHHHHHHHHHHHHcCCCCCCCCCCHH
Q 042831          563 VSLLQWVW-----------------DLYG-NGKLLEAVDPRL----CRD---FDGQQIERLMIVGLWCAHPDENLRPSIR  617 (645)
Q Consensus       563 ~~l~~~~~-----------------~~~~-~~~l~~~~d~~l----~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPs~~  617 (645)
                      ..++....                 +++. .+.+....++..    ...   ....+-..+++|+..||+.||++|||++
T Consensus       354 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~  433 (467)
T PTZ00284        354 LHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNAR  433 (467)
T ss_pred             HHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHH
Confidence            22221110                 0000 001111111100    000   0001124577899999999999999999


Q ss_pred             HHHHHhccCC------CCCCCCCCCCC
Q 042831          618 QVIHVLNFEA------PLPALPPKMPV  638 (645)
Q Consensus       618 evl~~L~~~~------~~p~~p~~~p~  638 (645)
                      |+++|.++..      ..|.+|...+.
T Consensus       434 e~L~Hp~~~~~~~~~~~~~~~~~~~~~  460 (467)
T PTZ00284        434 QMTTHPYVLKYYPECRQHPNYPDNRSM  460 (467)
T ss_pred             HHhcCccccccCCccccCCCCCCcccc
Confidence            9999999764      34555544443

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=9.9e-38  Score=325.12  Aligned_cols=269  Identities=23%  Similarity=0.308  Sum_probs=207.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|...++||+|+||.||+|++..+++.||+|.+.... ......+.+|+.++.+++||||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            56888999999999999999999889999999986543 23345677899999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      ++ ++|..++......+++..+..++.|+++||.|||+   .+++|+||||+||++++++.+||+|||++........ .
T Consensus        86 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~  160 (301)
T cd07873          86 LD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-T  160 (301)
T ss_pred             cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC-c
Confidence            96 68988887666678999999999999999999998   8999999999999999999999999999875432221 1


Q ss_pred             eeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc------------CCc
Q 042831          511 TTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG------------NGK  577 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~------------~~~  577 (645)
                      .....++..|+|||.+.+. .++.++|||||||++|||++|+.||......+.   .........            ...
T Consensus       161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  237 (301)
T cd07873         161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ---LHFIFRILGTPTEETWPGILSNEE  237 (301)
T ss_pred             ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCChhhchhhhcccc
Confidence            2234568899999987654 478899999999999999999999975543211   111111110            000


Q ss_pred             cccccCccccCCC----CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          578 LLEAVDPRLCRDF----DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       578 l~~~~d~~l~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      ....-.+......    .......+.+++.+|++.||++|||+.|++++.|+...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~  292 (301)
T cd07873         238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL  292 (301)
T ss_pred             ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            0000001110000    00112356788999999999999999999999998653

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=1.2e-37  Score=336.58  Aligned_cols=258  Identities=26%  Similarity=0.346  Sum_probs=204.3

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCC-----CeEEEEEEeccCC-hhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCC
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRET-----NSYIAVKRVSQGS-KQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKK  422 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~-----~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~  422 (645)
                      ..++|...++||+|+||.||+|++...     +..||||++.... ....+.+.+|++++.++. ||||++++++|.+.+
T Consensus        35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~  114 (400)
T cd05105          35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG  114 (400)
T ss_pred             cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence            356788899999999999999987432     3579999997543 334567999999999996 999999999999999


Q ss_pred             eEEEEEEecCCCChhhhhhhcC----------------------------------------------------------
Q 042831          423 ELLLVYEFMPNGSLDSHLFKEN----------------------------------------------------------  444 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~----------------------------------------------------------  444 (645)
                      ..+||||||++|+|.+++.+..                                                          
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (400)
T cd05105         115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI  194 (400)
T ss_pred             ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence            9999999999999998875421                                                          


Q ss_pred             -------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC
Q 042831          445 -------------------------------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD  487 (645)
Q Consensus       445 -------------------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld  487 (645)
                                                           ..+++..+..++.||++||.|||+   .+++||||||+|||++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~  271 (400)
T cd05105         195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLA  271 (400)
T ss_pred             hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEe
Confidence                                                 247888899999999999999998   8999999999999999


Q ss_pred             CCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhH
Q 042831          488 SNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSL  565 (645)
Q Consensus       488 ~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l  565 (645)
                      .++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |+.||.......    
T Consensus       272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~----  347 (400)
T cd05105         272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS----  347 (400)
T ss_pred             CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH----
Confidence            9999999999999865332211 1222346778999999998889999999999999999997 999987543211    


Q ss_pred             HHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          566 LQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       566 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                        ........+..     ...    +......+.+++.+||+.||++||++.++.+.|..
T Consensus       348 --~~~~~~~~~~~-----~~~----~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~  396 (400)
T cd05105         348 --TFYNKIKSGYR-----MAK----PDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES  396 (400)
T ss_pred             --HHHHHHhcCCC-----CCC----CccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence              11111112211     111    11223467788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=3.2e-37  Score=311.79  Aligned_cols=247  Identities=28%  Similarity=0.438  Sum_probs=199.6

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCCh
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL  436 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL  436 (645)
                      ++||+|+||.||+|... ++..+|+|.+..... .....+.+|++++.+++|||+++++++|...+..++||||+++++|
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   79 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF   79 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence            46999999999999875 478899999876543 3445788999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeeccc
Q 042831          437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG  516 (645)
Q Consensus       437 ~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~g  516 (645)
                      .+++......+++..+..++.|++.+|.|||+   ++++|+||||+||+++.++.+||+|||++...............+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  156 (250)
T cd05085          80 LSFLRKKKDELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI  156 (250)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence            99987666678999999999999999999998   899999999999999999999999999987543322222222334


Q ss_pred             CccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHH
Q 042831          517 TMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQI  595 (645)
Q Consensus       517 t~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~  595 (645)
                      +..|+|||++..+.++.++||||||+++||+++ |..||......   ...    .....+...         .......
T Consensus       157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~---~~~----~~~~~~~~~---------~~~~~~~  220 (250)
T cd05085         157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ---QAR----EQVEKGYRM---------SCPQKCP  220 (250)
T ss_pred             cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH---HHH----HHHHcCCCC---------CCCCCCC
Confidence            567999999998899999999999999999998 99999754321   111    111111110         1111223


Q ss_pred             HHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          596 ERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       596 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ..+.+++.+|++.+|++||++.|+++.|.
T Consensus       221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         221 DDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            56788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.9e-38  Score=313.01  Aligned_cols=272  Identities=22%  Similarity=0.269  Sum_probs=211.8

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEec--cCChhhHHHHHHHHHHHHhcCCCCccEEEeeeee-----CC
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS--QGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE-----KK  422 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~--~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~-----~~  422 (645)
                      ....|...+.||+|++|.|..+.++.+|+.||||++.  .......++-.+|+++|++++|+||+.+.+.+..     -+
T Consensus        20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~   99 (359)
T KOG0660|consen   20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN   99 (359)
T ss_pred             ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence            4455666789999999999999999999999999997  4566677888999999999999999999998865     35


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      ..|+|+|+| +.+|...+. .+..|+.....-++.|+++||.|+|+   .+|+||||||+|+|++.+...||+|||+|+.
T Consensus       100 DvYiV~elM-etDL~~iik-~~~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFGLAR~  174 (359)
T KOG0660|consen  100 DVYLVFELM-ETDLHQIIK-SQQDLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFGLARY  174 (359)
T ss_pred             eeEEehhHH-hhHHHHHHH-cCccccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccccceee
Confidence            789999999 667877774 44558999999999999999999999   9999999999999999999999999999998


Q ss_pred             cccc-CCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHH--------HHH
Q 042831          503 VEHA-KGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWV--------WDL  572 (645)
Q Consensus       503 ~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~--------~~~  572 (645)
                      .+.. .....+..+-|.+|.|||++.. ..|+.+.||||.||++.||++|++-|.+.+.-.+..++..+        ...
T Consensus       175 ~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~  254 (359)
T KOG0660|consen  175 LDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQK  254 (359)
T ss_pred             ccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHH
Confidence            7543 1223456778999999998754 56999999999999999999999999877655444333211        111


Q ss_pred             hcCCccccccCccc-cCCCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          573 YGNGKLLEAVDPRL-CRDFDG-----QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       573 ~~~~~l~~~~d~~l-~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .+..+....+...- .+..+.     ..-...++|..++|..||.+|+|++|+|+|...+
T Consensus       255 i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~  314 (359)
T KOG0660|consen  255 IRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLA  314 (359)
T ss_pred             hccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhh
Confidence            11111111111000 000000     1124566778899999999999999999999754

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=1.2e-37  Score=323.00  Aligned_cols=256  Identities=27%  Similarity=0.464  Sum_probs=207.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcC-----CCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRE-----TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .+|...+.||+|+||.||+|....     ++..+++|.+........+.+.+|++++.+++|+|++++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            457778899999999999998642     456799999877666667789999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc
Q 042831          427 VYEFMPNGSLDSHLFKEN---------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN  491 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~  491 (645)
                      ||||+++++|.+++....               ..+++..++.++.||+.||+|||+   ++++||||||+||+++.++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCc
Confidence            999999999999986432               348999999999999999999998   89999999999999999999


Q ss_pred             EEEeeccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHH
Q 042831          492 AKIGDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWV  569 (645)
Q Consensus       492 ~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~  569 (645)
                      +||+|||+++....... .......++..|+|||.+....++.++|||||||++|||++ |+.||......   ..    
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---~~----  234 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT---EV----  234 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HH----
Confidence            99999999975533221 11223446778999999998899999999999999999998 99998654321   11    


Q ss_pred             HHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          570 WDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       570 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .+....+.....         .......+.+++.+|++++|++||++++|++.|+.-
T Consensus       235 ~~~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~  282 (291)
T cd05094         235 IECITQGRVLER---------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL  282 (291)
T ss_pred             HHHHhCCCCCCC---------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence            122222222111         111234677899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=8.7e-38  Score=328.36  Aligned_cols=247  Identities=23%  Similarity=0.344  Sum_probs=201.2

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.||+|+||.||++.+..+++.||+|.+...   .......+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999999999999999998753   233456677899999888 699999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |+|..++.+. ..+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++..... ......
T Consensus        81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~  155 (318)
T cd05570          81 GDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG-GVTTST  155 (318)
T ss_pred             CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcC-CCcccc
Confidence            9999888543 468999999999999999999998   89999999999999999999999999998743221 122233


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..|+..|+|||++.+..++.++|||||||++|||++|+.||......   .+.    .....+..      ....    .
T Consensus       156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~---~~~----~~i~~~~~------~~~~----~  218 (318)
T cd05570         156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED---ELF----QSILEDEV------RYPR----W  218 (318)
T ss_pred             eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH---HHH----HHHHcCCC------CCCC----c
Confidence            56899999999999999999999999999999999999999754321   111    11111111      1111    1


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHhccC
Q 042831          594 QIERLMIVGLWCAHPDENLRPSI-----RQVIHVLNFE  626 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~L~~~  626 (645)
                      ....+.+++.+||+.||++||++     .+++++.++.
T Consensus       219 ~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~  256 (318)
T cd05570         219 LSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFR  256 (318)
T ss_pred             CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcC
Confidence            22456788899999999999999     9999998764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-37  Score=327.19  Aligned_cols=260  Identities=21%  Similarity=0.279  Sum_probs=202.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|+||.||+++...+++.||+|.+...   .....+.+.+|+.++..++|+||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            4688899999999999999999999999999998642   2234566889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++.+....+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++........
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  157 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT  157 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence            9999999999997656679999999999999999999998   9999999999999999999999999999876543333


Q ss_pred             cceeecccCccccCcccccc-----CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          509 SQTTVLAGTMGYMAPECATT-----GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~-----~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      .......||+.|+|||++..     +.++.++|||||||++|||++|+.||......      +............. +.
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~------~~~~~i~~~~~~~~-~~  230 (331)
T cd05597         158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMNHKEHFQ-FP  230 (331)
T ss_pred             ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH------HHHHHHHcCCCccc-CC
Confidence            23333568999999999863     45788999999999999999999999753321      11111111111111 11


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcC--CCCCCCCCCHHHHHHHhccC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCA--HPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl--~~dP~~RPs~~evl~~L~~~  626 (645)
                      +. ....+    ..+..++.+|+  ..++..||+++++++|.++.
T Consensus       231 ~~-~~~~~----~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~  270 (331)
T cd05597         231 PD-VTDVS----EEAKDLIRRLICSPETRLGRNGLQDFKDHPFFE  270 (331)
T ss_pred             Cc-cCCCC----HHHHHHHHHHccCcccccCCCCHHHHhcCCCCC
Confidence            11 11122    23344445544  44555589999999999874

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=3.4e-38  Score=339.34  Aligned_cols=257  Identities=21%  Similarity=0.307  Sum_probs=201.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      .+|...+.||+|+||.||+++...+++.||+|.+....   ......+.+|++++.+++|+||+++++.+.+++.+++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            36888999999999999999999999999999986432   234567889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC-
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK-  507 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~-  507 (645)
                      ||+++|+|.+++.+. ..+++.....++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||++..+.... 
T Consensus        81 E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~  156 (376)
T cd05598          81 DYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD  156 (376)
T ss_pred             eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence            999999999998653 468889999999999999999998   899999999999999999999999999975321000 


Q ss_pred             -----------------------------------------CcceeecccCccccCccccccCCCCcchhHHHHHHHHHH
Q 042831          508 -----------------------------------------GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALE  546 (645)
Q Consensus       508 -----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~e  546 (645)
                                                               ........||+.|+|||++.+..++.++|||||||++||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye  236 (376)
T cd05598         157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE  236 (376)
T ss_pred             ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence                                                     000123469999999999999899999999999999999


Q ss_pred             HHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCC---CHHHHHHHh
Q 042831          547 IACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRP---SIRQVIHVL  623 (645)
Q Consensus       547 lltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---s~~evl~~L  623 (645)
                      |++|+.||......+.   .   .... .......+ +. ....+    ..+.+++.+|+ .+|++|+   ++.|+++|.
T Consensus       237 ll~G~~Pf~~~~~~~~---~---~~i~-~~~~~~~~-~~-~~~~s----~~~~~li~~l~-~~p~~R~~~~t~~ell~h~  302 (376)
T cd05598         237 MLVGQPPFLADTPAET---Q---LKVI-NWETTLHI-PS-QAKLS----REASDLILRLC-CGAEDRLGKNGADEIKAHP  302 (376)
T ss_pred             hhhCCCCCCCCCHHHH---H---HHHh-ccCccccC-CC-CCCCC----HHHHHHHHHHh-cCHhhcCCCCCHHHHhCCC
Confidence            9999999975443211   1   1111 10000000 10 11122    23344455555 4999999   999999999


Q ss_pred             ccC
Q 042831          624 NFE  626 (645)
Q Consensus       624 ~~~  626 (645)
                      ++.
T Consensus       303 ~~~  305 (376)
T cd05598         303 FFK  305 (376)
T ss_pred             CcC
Confidence            875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=3e-37  Score=318.20  Aligned_cols=256  Identities=24%  Similarity=0.363  Sum_probs=208.0

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      |+..+.||+|+||.||+|.+..++..+++|.+........+.+.+|+++++.++|||++++++++..++..++|+||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            45678899999999999999998999999999776666778899999999999999999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      ++|..++.+....+++..+..++.|+++||.|||+   .+++||||||+||+++.++.+||+|||++....... .....
T Consensus        87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~~~~  162 (282)
T cd06643          87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRRDS  162 (282)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEccccccccccccc-ccccc
Confidence            99999887666779999999999999999999998   899999999999999999999999999987543221 12233


Q ss_pred             cccCccccCccccc-----cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          514 LAGTMGYMAPECAT-----TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       514 ~~gt~~y~aPE~~~-----~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ..++..|+|||++.     ...++.++|||||||++|||++|+.||.......   .   +.... .+..     +.+. 
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~---~---~~~~~-~~~~-----~~~~-  229 (282)
T cd06643         163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR---V---LLKIA-KSEP-----PTLA-  229 (282)
T ss_pred             ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH---H---HHHHh-hcCC-----CCCC-
Confidence            46889999999874     3457889999999999999999999997543211   1   11111 1110     1110 


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                       .+......+.+++.+||+.||++||++.+++++.++..
T Consensus       230 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~  267 (282)
T cd06643         230 -QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTV  267 (282)
T ss_pred             -CccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEec
Confidence             01112245678889999999999999999999998753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=3.3e-37  Score=314.90  Aligned_cols=257  Identities=25%  Similarity=0.382  Sum_probs=208.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...++||+|+||.||+|+...+++.||||.+...   .......+.+|++++++++|||++++++++...+..++|+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            5788899999999999999999988999999987542   3344567889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          429 EFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       429 Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      ||+++++|.+++..   ....+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence            99999999988753   34568999999999999999999998   8999999999999999999999999999876543


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      ... ......++..|+|||.+.+...+.++|+||||+++|||++|+.||......    ...+... .....     .+.
T Consensus       159 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~----~~~~~~~-~~~~~-----~~~  227 (267)
T cd08228         159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LFSLCQK-IEQCD-----YPP  227 (267)
T ss_pred             hhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc----HHHHHHH-HhcCC-----CCC
Confidence            221 122346788999999998888999999999999999999999998643321    1111111 11111     111


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .   ........+.+++.+||+.+|++||++++|++.++.
T Consensus       228 ~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~  264 (267)
T cd08228         228 L---PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ  264 (267)
T ss_pred             C---ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence            1   112233567888999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=1.5e-37  Score=320.70  Aligned_cols=255  Identities=27%  Similarity=0.446  Sum_probs=203.2

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEc----CCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFR----ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~----~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .+|+..+.||+|+||.||+|.+.    .++..|++|.+... ..+...++.+|++++++++||||+++++++..++..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            45777899999999999999863    34678999998743 34455788999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhc----------------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC
Q 042831          427 VYEFMPNGSLDSHLFKE----------------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF  490 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~  490 (645)
                      ||||+++++|.+++...                ...+++.+...++.|++.||.|||+   ++++||||||+|||+++++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~  161 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQL  161 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCC
Confidence            99999999999988532                2357899999999999999999998   8999999999999999999


Q ss_pred             cEEEeeccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHH
Q 042831          491 NAKIGDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQW  568 (645)
Q Consensus       491 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~  568 (645)
                      .+||+|||+++....... .......++..|+|||++.++.++.++|||||||++|||++ |..||......   .+.+ 
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~---~~~~-  237 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ---EVIE-  237 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHH-
Confidence            999999999976533221 11222345678999999988889999999999999999998 99998643321   1122 


Q ss_pred             HHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          569 VWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       569 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                         ....+....     ....+    ...+..++.+|+++||++||++.+++++|..
T Consensus       238 ---~~~~~~~~~-----~~~~~----~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         238 ---MVRKRQLLP-----CSEDC----PPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             ---HHHcCCcCC-----CCCCC----CHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence               111221111     11112    2456778899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=9.4e-38  Score=346.31  Aligned_cols=258  Identities=21%  Similarity=0.246  Sum_probs=207.4

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC----
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK----  422 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~----  422 (645)
                      ...++|...+.||+|+||.||++++..+++.||||++...  .......+.+|+..+..++|+|++++++.+....    
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            3456889999999999999999999989999999998654  3455667889999999999999999988765332    


Q ss_pred             ----eEEEEEEecCCCChhhhhhhc---CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEe
Q 042831          423 ----ELLLVYEFMPNGSLDSHLFKE---NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG  495 (645)
Q Consensus       423 ----~~~lV~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~  495 (645)
                          .+++||||+++|+|.+++...   ...+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~vkL~  185 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLVKLG  185 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCEEEE
Confidence                368999999999999988642   3578999999999999999999998   899999999999999999999999


Q ss_pred             eccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc
Q 042831          496 DFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG  574 (645)
Q Consensus       496 DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~  574 (645)
                      |||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......      +.+ ....
T Consensus       186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~------~~~-~~~~  258 (496)
T PTZ00283        186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME------EVM-HKTL  258 (496)
T ss_pred             ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH------HHH-HHHh
Confidence            9999986543221 2233467999999999999999999999999999999999999999753311      111 1111


Q ss_pred             CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          575 NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       575 ~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .+...    + +...    ....+..++..||+.||++||++.+++++.+.
T Consensus       259 ~~~~~----~-~~~~----~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~  300 (496)
T PTZ00283        259 AGRYD----P-LPPS----ISPEMQEIVTALLSSDPKRRPSSSKLLNMPIC  300 (496)
T ss_pred             cCCCC----C-CCCC----CCHHHHHHHHHHcccChhhCcCHHHHHhCHHH
Confidence            12111    1 1111    23457788899999999999999999987653

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-38  Score=332.20  Aligned_cols=256  Identities=27%  Similarity=0.435  Sum_probs=215.6

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ....+....++||.|.||.||.|.|+.-.-.||||.++.+ ....++|+.|+.+|+.++|||+|+|+|+|..+..+|||.
T Consensus       264 meRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiT  342 (1157)
T KOG4278|consen  264 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIIT  342 (1157)
T ss_pred             ccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEE
Confidence            3334555678999999999999999987888999998654 456789999999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          429 EFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||.+|+|.+||.+. +..++.-..+.++.||++|+.||..   +++|||||.++|+|+.++..+|++||||++++....
T Consensus       343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT  419 (1157)
T KOG4278|consen  343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT  419 (1157)
T ss_pred             ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhcCCc
Confidence            999999999999864 3467777888999999999999998   999999999999999999999999999999886554


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                      +.......-.+.|.|||.+....++.|+|||+|||+|||+.| |..||...+       ...|++++++|-.++.     
T Consensus       420 YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-------lSqVY~LLEkgyRM~~-----  487 (1157)
T KOG4278|consen  420 YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-------LSQVYGLLEKGYRMDG-----  487 (1157)
T ss_pred             eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-------HHHHHHHHhccccccC-----
Confidence            433333334668999999999999999999999999999998 999997543       2335666655533221     


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                          +..+...+.+|+++||++.|.+||+++|+-+.++
T Consensus       488 ----PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafE  521 (1157)
T KOG4278|consen  488 ----PEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFE  521 (1157)
T ss_pred             ----CCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence                2234467888999999999999999999887776

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.2e-37  Score=337.37  Aligned_cols=266  Identities=19%  Similarity=0.210  Sum_probs=202.9

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ..+|...+.||+|+||.||++.+..+++.||||....      ..+.+|++++++++|+||+++++++..++..++|||+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            3468899999999999999999999999999996432      2456899999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc-
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS-  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~-  509 (645)
                      + .++|..++......++|.+++.|+.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++........ 
T Consensus       242 ~-~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~  317 (461)
T PHA03211        242 Y-RSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP  317 (461)
T ss_pred             c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence            9 578888887666679999999999999999999998   89999999999999999999999999999865432221 


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCC-CCCchhHHHHHHHHhcCCcc-----ccccC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKA-PQGQVSLLQWVWDLYGNGKL-----LEAVD  583 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~-~~~~~~l~~~~~~~~~~~~l-----~~~~d  583 (645)
                      ......||..|+|||++.+..++.++|||||||+||||++|..|+.... ..........+.........     .....
T Consensus       318 ~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~  397 (461)
T PHA03211        318 FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAG  397 (461)
T ss_pred             cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcc
Confidence            1223569999999999999999999999999999999999886653222 11111001111111111100     00000


Q ss_pred             c------------cccCCCCH-------HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          584 P------------RLCRDFDG-------QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       584 ~------------~l~~~~~~-------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .            ........       .....+..|+.+||+.||++|||+.|+|++.+++
T Consensus       398 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~  459 (461)
T PHA03211        398 SRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQ  459 (461)
T ss_pred             hHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccC
Confidence            0            00000000       0112466788999999999999999999999885

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=6.6e-38  Score=337.81  Aligned_cols=256  Identities=21%  Similarity=0.298  Sum_probs=199.2

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .|...++||+|+||.||+|+...+++.||+|++...   .......+.+|+.++++++|+||+++++.+.+++..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            578889999999999999999999999999998653   23445678899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC--
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK--  507 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~--  507 (645)
                      ||++|+|.+++.+. ..+++.....++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.+....  
T Consensus        82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~  157 (382)
T cd05625          82 YIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS  157 (382)
T ss_pred             CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence            99999999988654 468899999999999999999998   899999999999999999999999999975321000  


Q ss_pred             --------------------------------------------CcceeecccCccccCccccccCCCCcchhHHHHHHH
Q 042831          508 --------------------------------------------GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIV  543 (645)
Q Consensus       508 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvl  543 (645)
                                                                  ........||+.|+|||++.+..++.++|||||||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi  237 (382)
T cd05625         158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI  237 (382)
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence                                                        000122468999999999999899999999999999


Q ss_pred             HHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCC---HHHHH
Q 042831          544 ALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPS---IRQVI  620 (645)
Q Consensus       544 l~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~evl  620 (645)
                      +|||++|+.||....+.+.      ............  .+. ....+.    .+.+++.+|+ .+|++|++   +.|++
T Consensus       238 l~elltG~~Pf~~~~~~~~------~~~i~~~~~~~~--~p~-~~~~s~----~~~~li~~l~-~~p~~R~~~~~~~ei~  303 (382)
T cd05625         238 LYEMLVGQPPFLAQTPLET------QMKVINWQTSLH--IPP-QAKLSP----EASDLIIKLC-RGPEDRLGKNGADEIK  303 (382)
T ss_pred             HHHHHhCCCCCCCCCHHHH------HHHHHccCCCcC--CCC-cccCCH----HHHHHHHHHc-cCHhHcCCCCCHHHHh
Confidence            9999999999975432211      111111000000  010 011222    2333344443 49999997   99999


Q ss_pred             HHhccC
Q 042831          621 HVLNFE  626 (645)
Q Consensus       621 ~~L~~~  626 (645)
                      +|.++.
T Consensus       304 ~hp~f~  309 (382)
T cd05625         304 AHPFFK  309 (382)
T ss_pred             cCCCcC
Confidence            998764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.4e-38  Score=318.47  Aligned_cols=264  Identities=25%  Similarity=0.303  Sum_probs=204.9

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC-----eEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK-----ELLLV  427 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~-----~~~lV  427 (645)
                      .|...+++|.|.||.||+|+..++++.||||++-.+.+.    --+|+++|+++.|||||+|+-++....     ...+|
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            456678999999999999999999999999998655331    136999999999999999999886432     45789


Q ss_pred             EEecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC-CcEEEeeccCcccc
Q 042831          428 YEFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN-FNAKIGDFGLARLV  503 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~-~~~kl~DfGla~~~  503 (645)
                      |||||. +|...+..   .+..++.-.++-+..||.+||+|||+   .+|+||||||.|+|+|.+ |.+||||||.|+.+
T Consensus       101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L  176 (364)
T KOG0658|consen  101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL  176 (364)
T ss_pred             HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence            999976 78777753   35678888888999999999999999   999999999999999965 99999999999988


Q ss_pred             cccCCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc-------C
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG-------N  575 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~-------~  575 (645)
                      ..+...  .....+..|+|||.+.+. .|+.+.||||.||++.||+-|++-|.+....++..++-.+...-.       +
T Consensus       177 ~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn  254 (364)
T KOG0658|consen  177 VKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMN  254 (364)
T ss_pred             ccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcC
Confidence            655433  445678899999988775 599999999999999999999999987665544333322211100       1


Q ss_pred             CccccccCccccCC-----CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          576 GKLLEAVDPRLCRD-----FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       576 ~~l~~~~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .+-.+...|.+...     +........++++.++++.+|.+|.++.|++.|.-|+
T Consensus       255 ~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFd  310 (364)
T KOG0658|consen  255 PNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFD  310 (364)
T ss_pred             cccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhH
Confidence            11112222222221     1222335677888999999999999999999999876

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.5e-37  Score=316.24  Aligned_cols=254  Identities=26%  Similarity=0.409  Sum_probs=209.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|+..+.||.|++|.||+|++..+++.||+|.+.... ......+.+|++++++++|+|++++++++.++...++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            36778899999999999999999899999999987553 44556788999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +++++|.+++...  .+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.++|+|||+++...... ..
T Consensus        81 ~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~  154 (274)
T cd06609          81 CGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-SK  154 (274)
T ss_pred             eCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccc-cc
Confidence            9999999998643  78999999999999999999998   899999999999999999999999999998765432 22


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      .....++..|+|||++.+..++.++||||||+++|||++|+.||....+..   .   ... ...+     ..+.+... 
T Consensus       155 ~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~---~---~~~-~~~~-----~~~~~~~~-  221 (274)
T cd06609         155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR---V---LFL-IPKN-----NPPSLEGN-  221 (274)
T ss_pred             cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH---H---HHH-hhhc-----CCCCCccc-
Confidence            233567889999999998889999999999999999999999997543211   1   111 1111     11111111 


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                        .....+.+++..||+.+|++||++++++++.+..
T Consensus       222 --~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~  255 (274)
T cd06609         222 --KFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIK  255 (274)
T ss_pred             --ccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhc
Confidence              0223567788999999999999999999998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=1.1e-37  Score=341.55  Aligned_cols=264  Identities=20%  Similarity=0.299  Sum_probs=199.4

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC--------
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--------  421 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~--------  421 (645)
                      ...+|...++||+|+||.||+|++..+++.||||++.....    ...+|+.++++++||||+++++++...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ----YKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            34679999999999999999999998999999998854322    234799999999999999999876432        


Q ss_pred             CeEEEEEEecCCCChhhhhh---hcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC-cEEEeec
Q 042831          422 KELLLVYEFMPNGSLDSHLF---KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF-NAKIGDF  497 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~-~~kl~Df  497 (645)
                      ..+++||||+++ +|.+++.   ..+..+++...+.++.||+.||.|||+   .+|+||||||+|||++.++ .+||+||
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DF  215 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDF  215 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeecc
Confidence            246799999975 6766654   245679999999999999999999998   8999999999999999664 7999999


Q ss_pred             cCcccccccCCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC
Q 042831          498 GLARLVEHAKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG  576 (645)
Q Consensus       498 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~  576 (645)
                      |+++......  ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+..   .......+..
T Consensus       216 Gla~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~---~~i~~~~~~p  290 (440)
T PTZ00036        216 GSAKNLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQL---VRIIQVLGTP  290 (440)
T ss_pred             ccchhccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHhCCC
Confidence            9998654322  22335689999999988654 6899999999999999999999999765432211   1111111110


Q ss_pred             ----------ccccc-----cCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          577 ----------KLLEA-----VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       577 ----------~l~~~-----~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                                ...+.     ....+...++......+.+++.+||+.||.+|||+.|+++|.+++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~  355 (440)
T PTZ00036        291 TEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFD  355 (440)
T ss_pred             CHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHH
Confidence                      00000     000111111111235678899999999999999999999999975

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=8.9e-38  Score=323.84  Aligned_cols=259  Identities=27%  Similarity=0.431  Sum_probs=207.0

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEcCC-----CeEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeee
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFRET-----NSYIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHE  420 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~-----~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~  420 (645)
                      ....++|+..+.||+|+||.||++.....     ...+|+|.+... ..+...++.+|++++.++ +|+|++++++++..
T Consensus         8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   87 (293)
T cd05053           8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ   87 (293)
T ss_pred             ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence            34456788889999999999999988643     378999998754 334556788999999999 79999999999999


Q ss_pred             CCeEEEEEEecCCCChhhhhhhc---------------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeE
Q 042831          421 KKELLLVYEFMPNGSLDSHLFKE---------------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM  485 (645)
Q Consensus       421 ~~~~~lV~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NIL  485 (645)
                      ++..+++|||+++|+|..++...               ...+++..++.++.|++.||.|||+   .+++||||||+||+
T Consensus        88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil  164 (293)
T cd05053          88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVL  164 (293)
T ss_pred             CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEE
Confidence            99999999999999999998532               3568999999999999999999998   89999999999999


Q ss_pred             ECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCch
Q 042831          486 LDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQV  563 (645)
Q Consensus       486 ld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~  563 (645)
                      +++++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||......+  
T Consensus       165 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--  242 (293)
T cd05053         165 VTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE--  242 (293)
T ss_pred             EcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH--
Confidence            999999999999999865433221 1122234578999999988889999999999999999998 999986443211  


Q ss_pred             hHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          564 SLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       564 ~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                           +......+...         ..+......+.+++.+|++.+|++|||+.|+++.|+.
T Consensus       243 -----~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~  290 (293)
T cd05053         243 -----LFKLLKEGYRM---------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR  290 (293)
T ss_pred             -----HHHHHHcCCcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence                 11111122111         1111223567789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=2.6e-37  Score=315.31  Aligned_cols=253  Identities=30%  Similarity=0.463  Sum_probs=202.8

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|...++||+|+||.||+|++.++ ..||+|+++... ...+++.+|++++.+++|+|++++++.+. ....++||||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~   81 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY   81 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence            35688899999999999999998765 469999987532 23467899999999999999999999875 4567999999


Q ss_pred             cCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      +++|+|.+++.+. ...+++..+..++.|+++||.|||+   .+++||||||+||++++++.+||+|||.++........
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~  158 (262)
T cd05071          82 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT  158 (262)
T ss_pred             CCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeeccccccc
Confidence            9999999999753 3568999999999999999999998   89999999999999999999999999999866543322


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ......++..|+|||+..++.++.++||||||+++|||++ |+.||......   ..    ......+.     ..    
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~---~~----~~~~~~~~-----~~----  222 (262)
T cd05071         159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EV----LDQVERGY-----RM----  222 (262)
T ss_pred             cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH---HH----HHHHhcCC-----CC----
Confidence            2223446678999999988899999999999999999999 88888754321   11    11111111     00    


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....+....+.+++.+|++++|++||++.++++.|+.
T Consensus       223 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~  259 (262)
T cd05071         223 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED  259 (262)
T ss_pred             CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence            1112334567889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=7.8e-38  Score=329.43  Aligned_cols=247  Identities=24%  Similarity=0.322  Sum_probs=197.0

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHH-HHHhcCCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVK-IISRLRHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~-~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.||+|+||.||+|++..+|+.||+|++....   ....+++..|.. +++.++||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            46999999999999999999999999986432   223345556655 45779999999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |+|..++.. +..+++.....++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... ......
T Consensus        81 g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~~  155 (323)
T cd05575          81 GELFFHLQR-ERSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKTTST  155 (323)
T ss_pred             CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCcccc
Confidence            999988854 4568999999999999999999998   89999999999999999999999999998753221 222334


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+.    +....+..      .+....   
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~---~~~----~~i~~~~~------~~~~~~---  219 (323)
T cd05575         156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA---EMY----DNILNKPL------RLKPNI---  219 (323)
T ss_pred             ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH---HHH----HHHHcCCC------CCCCCC---
Confidence            57899999999999989999999999999999999999999754321   111    11111111      111122   


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCH----HHHHHHhccC
Q 042831          594 QIERLMIVGLWCAHPDENLRPSI----RQVIHVLNFE  626 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RPs~----~evl~~L~~~  626 (645)
                       ...+.+++.+|++.||++||++    ++++++.++.
T Consensus       220 -~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~  255 (323)
T cd05575         220 -SVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFS  255 (323)
T ss_pred             -CHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcC
Confidence             3456778899999999999987    5888887753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=3.9e-37  Score=328.94  Aligned_cols=269  Identities=22%  Similarity=0.245  Sum_probs=202.9

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC-----
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK-----  422 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~-----  422 (645)
                      ..++|...+.||+|+||.||++.+..+|+.||+|++...  .......+.+|+.++.+++||||+++++++...+     
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            347899999999999999999999999999999998643  3344567889999999999999999999986443     


Q ss_pred             -eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          423 -ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       423 -~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                       ..++||||+++ +|...+.   ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~  171 (359)
T cd07876          99 QDVYLVMELMDA-NLCQVIH---MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  171 (359)
T ss_pred             ceeEEEEeCCCc-CHHHHHh---ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence             57999999965 5555553   247889999999999999999998   899999999999999999999999999997


Q ss_pred             cccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchh------------HHH--
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVS------------LLQ--  567 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~------------l~~--  567 (645)
                      .....  .......||..|+|||++.+..++.++|||||||++|||++|+.||...+..+...            ...  
T Consensus       172 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (359)
T cd07876         172 TACTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL  249 (359)
T ss_pred             ccccC--ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence            54321  22233568999999999999899999999999999999999999997543211100            000  


Q ss_pred             --HHHHHhcCC-cc-----ccccCcccc---CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          568 --WVWDLYGNG-KL-----LEAVDPRLC---RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       568 --~~~~~~~~~-~l-----~~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                        .+....... ..     .+.......   ...+......+.+++.+||+.||++|||+.|+++|.+...
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         250 QPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             HHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence              000000000 00     000000000   0011112345778899999999999999999999998653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=4.2e-37  Score=319.96  Aligned_cols=258  Identities=24%  Similarity=0.355  Sum_probs=211.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      .+|...+.||+|++|.||+|....+++.||+|.+........+.+.+|+.+++.++|+|++++++++..++..++||||+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            57888999999999999999998889999999997665555677889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++++|.+++.+  ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||++........ ..
T Consensus        99 ~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~-~~  172 (297)
T cd06656          99 AGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KR  172 (297)
T ss_pred             CCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc-Cc
Confidence            99999998854  457899999999999999999998   8999999999999999999999999999876533221 22


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ....+++.|+|||.+.+..++.++|+|||||++|+|++|+.||..........   .   ....+      .+.+  ...
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~---~---~~~~~------~~~~--~~~  238 (297)
T cd06656         173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY---L---IATNG------TPEL--QNP  238 (297)
T ss_pred             CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee---e---eccCC------CCCC--CCc
Confidence            33468889999999998889999999999999999999999997543321110   0   00000      0010  011


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCC
Q 042831          592 GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPL  629 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~  629 (645)
                      ......+.+++.+||+.+|++||++++++++.++....
T Consensus       239 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~  276 (297)
T cd06656         239 ERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAK  276 (297)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccc
Confidence            12234567788999999999999999999999887543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=2.4e-37  Score=321.61  Aligned_cols=253  Identities=28%  Similarity=0.431  Sum_probs=201.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCe--EEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNS--YIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~--~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ++|+..+.||+|+||.||+|.+..++.  .+++|.++.. .....+.+.+|++++.++ +|||++++++++...+..++|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            468888999999999999999877654  4788888643 344567899999999999 799999999999999999999


Q ss_pred             EEecCCCChhhhhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcE
Q 042831          428 YEFMPNGSLDSHLFKEN---------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA  492 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~  492 (645)
                      +||+++++|.+++.+..               ..+++..+..++.|++.||.|||+   .+++||||||+|||+++++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeE
Confidence            99999999999986432               358899999999999999999998   899999999999999999999


Q ss_pred             EEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHH
Q 042831          493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWD  571 (645)
Q Consensus       493 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~  571 (645)
                      ||+|||++.......  .......+..|+|||++....++.++|||||||++|||++ |+.||......   .+.+    
T Consensus       159 kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~---~~~~----  229 (297)
T cd05089         159 KIADFGLSRGEEVYV--KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA---ELYE----  229 (297)
T ss_pred             EECCcCCCcccccee--ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH---HHHH----
Confidence            999999986432111  1111223457999999988889999999999999999997 99999754321   1111    


Q ss_pred             HhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          572 LYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       572 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....+.     .+....    .....+.+++.+|++.+|.+||+++++++.|..
T Consensus       230 ~~~~~~-----~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  274 (297)
T cd05089         230 KLPQGY-----RMEKPR----NCDDEVYELMRQCWRDRPYERPPFAQISVQLSR  274 (297)
T ss_pred             HHhcCC-----CCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            111111     111111    122456788999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=3.9e-37  Score=316.86  Aligned_cols=258  Identities=25%  Similarity=0.402  Sum_probs=205.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCe----EEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNS----YIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~----~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      .++|...++||+|+||.||+|++..++.    .||+|.+... .....+++.+|+.++..++|+|+++++++|... ..+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~   84 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ   84 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence            4578888999999999999999876665    4899998754 334567888999999999999999999999754 578


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +++||+++|+|.+++.+....+++..+..++.|++.||.|||+   ++++||||||+|||+++++.+||+|||+++....
T Consensus        85 l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~  161 (279)
T cd05109          85 LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI  161 (279)
T ss_pred             EEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence            9999999999999997766779999999999999999999998   8999999999999999999999999999986643


Q ss_pred             cCCcc-eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          506 AKGSQ-TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       506 ~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ..... .....++..|+|||.+.+..++.++|||||||++|||++ |..||......   .+..+    ...+....   
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~----~~~~~~~~---  231 (279)
T cd05109         162 DETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR---EIPDL----LEKGERLP---  231 (279)
T ss_pred             ccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHH----HHCCCcCC---
Confidence            22211 112234678999999988889999999999999999998 99998643321   12221    11221110   


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                        .    +......+.+++.+||+.||++||++.++++.|.....
T Consensus       232 --~----~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05109         232 --Q----PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR  270 (279)
T ss_pred             --C----CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence              0    11123457788899999999999999999998875443

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=2.8e-37  Score=319.85  Aligned_cols=254  Identities=27%  Similarity=0.406  Sum_probs=202.7

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcC-----CCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRE-----TNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      +|...+.||+|+||.||+|+...     ....+++|.+.... .....++.+|+.++.+++||||+++++.|..++..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            46778899999999999998753     23579999887553 3445789999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhc-----------------------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCC
Q 042831          427 VYEFMPNGSLDSHLFKE-----------------------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSN  483 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~-----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~N  483 (645)
                      |+||+++++|.+++...                       ...+++..++.++.|++.||.|||+   .+++||||||+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~n  157 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARN  157 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhhe
Confidence            99999999999987531                       1357899999999999999999998   899999999999


Q ss_pred             eEECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCC
Q 042831          484 IMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQG  561 (645)
Q Consensus       484 ILld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~  561 (645)
                      ||+++++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||++++||++ |+.||....+. 
T Consensus       158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-  236 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE-  236 (290)
T ss_pred             EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence            99999999999999999765332211 1222345678999999988889999999999999999998 99999654321 


Q ss_pred             chhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          562 QVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       562 ~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                            .+++....+..     ..    .+......+.+++..|++++|++||++.|+++.|+.
T Consensus       237 ------~~~~~~~~~~~-----~~----~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~  285 (290)
T cd05045         237 ------RLFNLLKTGYR-----ME----RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEK  285 (290)
T ss_pred             ------HHHHHHhCCCC-----CC----CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence                  12222222211     11    111223467788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=2.9e-37  Score=319.25  Aligned_cols=255  Identities=25%  Similarity=0.358  Sum_probs=206.3

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      |+..+.||+|+||.||++.+..+++.||+|.+....   ....+.+.+|+.++.+++|+|++++++.+..++..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            667788999999999999999999999999986432   23345677899999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      +++++|.+++... ...+++..+..++.|++.||.|||+   .+++||||||+||+++.++.++|+|||++.......  
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--  156 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--  156 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence            9999999988643 3468999999999999999999998   999999999999999999999999999987543222  


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      ......|+..|+|||.+.+..++.++|||||||++|||++|+.||...............   ...      ........
T Consensus       157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~---~~~------~~~~~~~~  227 (285)
T cd05630         157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL---VKE------VQEEYSEK  227 (285)
T ss_pred             cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhh---hhh------hhhhcCcc
Confidence            222346899999999999989999999999999999999999999754332111111111   000      00111111


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHhccC
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPS-----IRQVIHVLNFE  626 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~~  626 (645)
                      +    ...+.+++..||+.||++|||     ++|+++|.++.
T Consensus       228 ~----~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~  265 (285)
T cd05630         228 F----SPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFK  265 (285)
T ss_pred             C----CHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhh
Confidence            2    234678889999999999999     99999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=5e-37  Score=328.76  Aligned_cols=266  Identities=21%  Similarity=0.240  Sum_probs=204.3

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC------
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK------  421 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~------  421 (645)
                      ..++|...+.||+|+||.||++.+..+++.||||++...  .....+.+.+|+.+++.++||||+++++++...      
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            357899999999999999999999988999999998753  334456788999999999999999999987543      


Q ss_pred             CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          422 KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      ...++||||+++ +|...+.   ..+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~  174 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  174 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHH---hcCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence            357999999965 6666663   247889999999999999999998   899999999999999999999999999997


Q ss_pred             cccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc-------
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG-------  574 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~-------  574 (645)
                      .....  .......++..|+|||++.+..++.++|||||||++|||++|+.||......+   ....+....+       
T Consensus       175 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~  249 (364)
T cd07875         175 TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID---QWNKVIEQLGTPCPEFM  249 (364)
T ss_pred             ccCCC--CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCCHHHH
Confidence            65322  12233568999999999999999999999999999999999999997544221   1111111000       


Q ss_pred             -------------CCcccc----ccCccc----cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          575 -------------NGKLLE----AVDPRL----CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       575 -------------~~~l~~----~~d~~l----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                                   ......    .+.+..    ...........+.+++.+|++.||++|||+.|+++|.++..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             HhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence                         000000    000000    00111112346778999999999999999999999998753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=3.3e-37  Score=318.71  Aligned_cols=255  Identities=25%  Similarity=0.316  Sum_probs=205.1

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      |...+.||+|+||+||+|.+..+++.+|+|.+....   ......+.+|++++.+++|+|++++.+.+..++..++||||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            566788999999999999999999999999986542   22345678899999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      +++++|.+++... ...+++..+..++.|++.||.|||+   .+|+||||||+||++++++.+||+|||++.......  
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~--  156 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE--  156 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC--
Confidence            9999999888654 3469999999999999999999998   899999999999999999999999999987543221  


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      ......|+..|+|||++.+..++.++|+|||||++|||++|+.||...........   +......+.      ......
T Consensus       157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~---~~~~~~~~~------~~~~~~  227 (285)
T cd05632         157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREE---VDRRVLETE------EVYSAK  227 (285)
T ss_pred             cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHhhhccc------cccCcc
Confidence            22335689999999999888899999999999999999999999975432211111   111111110      111111


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHhccC
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPS-----IRQVIHVLNFE  626 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~~  626 (645)
                          ....+.+++..|++.||++||+     +++++.+.++.
T Consensus       228 ----~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~  265 (285)
T cd05632         228 ----FSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFR  265 (285)
T ss_pred             ----CCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhh
Confidence                2235667889999999999999     88999987653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=5.5e-37  Score=314.11  Aligned_cols=253  Identities=26%  Similarity=0.444  Sum_probs=199.8

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCe--EEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC------Ce
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNS--YIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK------KE  423 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~--~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~------~~  423 (645)
                      |...+.||+|+||.||+|.+..++.  .+|+|.++..  +....+.+..|++++.+++|+||++++++|...      ..
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            3457889999999999999877664  6999988654  345567899999999999999999999987532      24


Q ss_pred             EEEEEEecCCCChhhhhhh-----cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeecc
Q 042831          424 LLLVYEFMPNGSLDSHLFK-----ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG  498 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfG  498 (645)
                      .++++||+++|+|.+++..     ....+++.....++.|++.||+|||+   .+|+||||||+|||+++++.+||+|||
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg  157 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFG  157 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCC
Confidence            6899999999999988742     23458999999999999999999998   899999999999999999999999999


Q ss_pred             CcccccccCCcc-eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCC
Q 042831          499 LARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNG  576 (645)
Q Consensus       499 la~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~  576 (645)
                      +++......... .....++..|++||++....++.++||||||+++|||++ |+.||......   .    ..+...++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~----~~~~~~~~  230 (272)
T cd05075         158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS---E----IYDYLRQG  230 (272)
T ss_pred             cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH---H----HHHHHHcC
Confidence            998664322211 122345678999999999899999999999999999999 88998653321   1    12222233


Q ss_pred             ccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       577 ~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....     ...    .....+.+++.+||++||++|||+.++++.|+.
T Consensus       231 ~~~~-----~~~----~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~  270 (272)
T cd05075         231 NRLK-----QPP----DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK  270 (272)
T ss_pred             CCCC-----CCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence            2211     111    123457788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=1.1e-37  Score=329.41  Aligned_cols=260  Identities=21%  Similarity=0.273  Sum_probs=204.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|+||.||++++..+++.||+|.+...   .......+.+|+.++..++|+||+++++++.+++..++||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4688899999999999999999999999999998642   2233456788999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++.+....+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++.......
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  157 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT  157 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence            9999999999997766678999999999999999999998   9999999999999999999999999999976543332


Q ss_pred             cceeecccCccccCcccccc-----CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          509 SQTTVLAGTMGYMAPECATT-----GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~-----~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      .......|++.|+|||++.+     +.++.++|||||||+||||++|+.||......      +............ .+.
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~------~~~~~i~~~~~~~-~~p  230 (331)
T cd05624         158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMNHEERF-QFP  230 (331)
T ss_pred             eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH------HHHHHHHcCCCcc-cCC
Confidence            23334579999999998875     46788999999999999999999999753321      1111111111000 011


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHhccC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENL--RPSIRQVIHVLNFE  626 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~~~  626 (645)
                      +.+ .    +..+.+.+++.+|++.++++  |++++++++|.+++
T Consensus       231 ~~~-~----~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~  270 (331)
T cd05624         231 SHI-T----DVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFE  270 (331)
T ss_pred             Ccc-c----cCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcC
Confidence            111 1    12345566677777765544  57999999998764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=6.3e-37  Score=311.71  Aligned_cols=246  Identities=27%  Similarity=0.430  Sum_probs=196.7

Q ss_pred             ccCcCCcEEEEEEEEc--CCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCC
Q 042831          359 KLGQGGFGGVYKGFFR--ETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS  435 (645)
Q Consensus       359 ~LG~G~fG~Vy~g~~~--~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gs  435 (645)
                      .||+|+||.||+|.+.  +++..||+|.+.... ....+++.+|+.++++++|+||++++++|. ....++||||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            4899999999999875  445679999987653 344567999999999999999999999886 457899999999999


Q ss_pred             hhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc--eee
Q 042831          436 LDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ--TTV  513 (645)
Q Consensus       436 L~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~--~~~  513 (645)
                      |.+++......+++..+++++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.........  ...
T Consensus        81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  157 (257)
T cd05115          81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA  157 (257)
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence            999997666789999999999999999999998   899999999999999999999999999997554322211  111


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDG  592 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~  592 (645)
                      ..++..|+|||.+....++.++|||||||++||+++ |+.||......   ..    ......+...         ..+.
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~----~~~~~~~~~~---------~~~~  221 (257)
T cd05115         158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP---EV----MSFIEQGKRL---------DCPA  221 (257)
T ss_pred             CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH---HH----HHHHHCCCCC---------CCCC
Confidence            223568999999988889999999999999999996 99999754322   11    1122222211         1111


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          593 QQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       593 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .....+.+++..||+.+|++||++.+|.+.|.
T Consensus       222 ~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~  253 (257)
T cd05115         222 ECPPEMYALMKDCWIYKWEDRPNFAKVEERMR  253 (257)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            22356677889999999999999999999886

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=4.8e-38  Score=330.30  Aligned_cols=246  Identities=24%  Similarity=0.303  Sum_probs=198.5

Q ss_pred             CccCcCCcEEEEEEEE---cCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecC
Q 042831          358 QKLGQGGFGGVYKGFF---RETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP  432 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~---~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~  432 (645)
                      +.||+|+||.||+++.   ..+|+.||+|++....  ......+..|++++.+++||||+++++++...+..++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999876   3568899999987532  2234567789999999999999999999999999999999999


Q ss_pred             CCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCccee
Q 042831          433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT  512 (645)
Q Consensus       433 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~  512 (645)
                      +|+|.+++.+ ...+++..+..++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++..... .....
T Consensus        82 ~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~-~~~~~  156 (318)
T cd05582          82 GGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-EKKAY  156 (318)
T ss_pred             CCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC-CCcee
Confidence            9999998854 3468999999999999999999998   89999999999999999999999999998764332 12334


Q ss_pred             ecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCH
Q 042831          513 VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDG  592 (645)
Q Consensus       513 ~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~  592 (645)
                      ...|++.|+|||.+....++.++|||||||++|||++|+.||......   .....    ..++..      .+...   
T Consensus       157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~---~~~~~----i~~~~~------~~p~~---  220 (318)
T cd05582         157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK---ETMTM----ILKAKL------GMPQF---  220 (318)
T ss_pred             cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH---HHHHH----HHcCCC------CCCCC---
Confidence            467899999999999888999999999999999999999999754321   11111    111111      11111   


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHhcc
Q 042831          593 QQIERLMIVGLWCAHPDENLRPS-----IRQVIHVLNF  625 (645)
Q Consensus       593 ~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~  625 (645)
                       ....+..++.+||+.||++||+     +++++.+.++
T Consensus       221 -~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~  257 (318)
T cd05582         221 -LSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFF  257 (318)
T ss_pred             -CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCc
Confidence             1235667889999999999999     6678877665

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=4.5e-37  Score=312.88  Aligned_cols=252  Identities=30%  Similarity=0.459  Sum_probs=201.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|+..++||+|+||.||+|.... +..+|+|.+..... ..+.+.+|+.++++++|+|++++++++. ....+++|||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~   82 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNG-NTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM   82 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecC-CceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence            467888999999999999998764 56799999875433 3457899999999999999999999885 45688999999


Q ss_pred             CCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          432 PNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       432 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      ++++|.+++.+. ...+++..+..++.|++.||.|||+   .+++||||||+||++++++.++|+|||++..........
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~  159 (260)
T cd05070          83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA  159 (260)
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCccccc
Confidence            999999998754 3568999999999999999999998   899999999999999999999999999998654332222


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      .....++..|+|||.+.+..++.++|+||||+++|||++ |+.||......   ...++.    ..+.         ...
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~----~~~~---------~~~  223 (260)
T cd05070         160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR---EVLEQV----ERGY---------RMP  223 (260)
T ss_pred             ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHH----HcCC---------CCC
Confidence            222335668999999988889999999999999999999 89999653321   122211    1110         011


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .+......+.+++.+|++++|++|||++++.+.|+.
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         224 CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            112223567889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=2.9e-37  Score=309.65  Aligned_cols=267  Identities=24%  Similarity=0.306  Sum_probs=210.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-h-hHHHHHHHHHHHHhcCCCC-ccEEEeeeeeCC------
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-Q-GIKEYASEVKIISRLRHRN-LVQLLGWCHEKK------  422 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-~-~~~~~~~Ei~~l~~l~H~n-lv~l~~~~~~~~------  422 (645)
                      ..|...++||+|+||+||+|+...+|+.||+|+++...+ + .-....+|+.++.+++|+| |+++++++...+      
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            345667789999999999999999999999999976644 2 2345679999999999999 999999998877      


Q ss_pred             eEEEEEEecCCCChhhhhhhcC---CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccC
Q 042831          423 ELLLVYEFMPNGSLDSHLFKEN---SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL  499 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGl  499 (645)
                      .+++|+||+ .-+|..++....   ..++...++.++.||++||+|||+   ++|+||||||.|||++++|.+||+|||+
T Consensus        91 ~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGl  166 (323)
T KOG0594|consen   91 KLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGL  166 (323)
T ss_pred             eEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccch
Confidence            789999999 668988887644   457778999999999999999999   9999999999999999999999999999


Q ss_pred             cccccccCCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCc-
Q 042831          500 ARLVEHAKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK-  577 (645)
Q Consensus       500 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~-  577 (645)
                      |+....... ..+..+.|.+|.|||++.+. .|+...||||+||++.||++++..|....+   ..+...+++..+... 
T Consensus       167 Ara~~ip~~-~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se---~~ql~~If~~lGtP~e  242 (323)
T KOG0594|consen  167 ARAFSIPMR-TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE---IDQLFRIFRLLGTPNE  242 (323)
T ss_pred             HHHhcCCcc-cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH---HHHHHHHHHHcCCCCc
Confidence            996653322 24456789999999999887 699999999999999999999999986654   333444455543211 


Q ss_pred             --ccccc-----CccccCCC-----CHHH---HHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          578 --LLEAV-----DPRLCRDF-----DGQQ---IERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       578 --l~~~~-----d~~l~~~~-----~~~~---~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                        +....     ++......     ....   .....+++.+|++.+|.+|.|++.+++|..+.
T Consensus       243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~  306 (323)
T KOG0594|consen  243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFS  306 (323)
T ss_pred             cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhc
Confidence              11100     10110000     0001   13677888999999999999999999997765

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=4.6e-37  Score=314.22  Aligned_cols=255  Identities=29%  Similarity=0.458  Sum_probs=205.2

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCC---CeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRET---NSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~---~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      .+|...+.||+|+||.||+|.+..+   +..+|+|.++... ....+.+.+|+.++.+++||||+++++++..++..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            4677889999999999999988643   3479999886543 34457889999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+++++|.+++......+++.++..++.|++.||.|||+   ++++||||||+|||++.++.++|+|||+++......
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd05066          84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  160 (267)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence            99999999999997766678999999999999999999998   899999999999999999999999999998664432


Q ss_pred             Cccee--ecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          508 GSQTT--VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       508 ~~~~~--~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      .....  ...++..|+|||.+.++.++.++|+||||++++|+++ |+.||......   ......    .++.-     .
T Consensus       161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~---~~~~~~----~~~~~-----~  228 (267)
T cd05066         161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ---DVIKAI----EEGYR-----L  228 (267)
T ss_pred             ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH---HHHHHH----hCCCc-----C
Confidence            22111  1223567999999998889999999999999999886 99999754322   112211    11110     0


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..    .......+.+++.+|++.+|++||+|.++++.|+.
T Consensus       229 ~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  265 (267)
T cd05066         229 PA----PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK  265 (267)
T ss_pred             CC----CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence            00    11123456788899999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.8e-37  Score=318.57  Aligned_cols=265  Identities=28%  Similarity=0.404  Sum_probs=201.0

Q ss_pred             CCCCccCcCCcEEEEEEEE----cCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC--CeEEEE
Q 042831          355 NDDQKLGQGGFGGVYKGFF----RETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KELLLV  427 (645)
Q Consensus       355 ~~~~~LG~G~fG~Vy~g~~----~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~--~~~~lV  427 (645)
                      ...+.||+|+||.||++..    ..++..||+|.+.... ......+.+|++++++++||||++++++|...  ...++|
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            7788999999999988653    3467889999987543 34567788999999999999999999998653  468999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+++++|.+++..  ..+++.+++.++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++......
T Consensus        87 ~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~  161 (283)
T cd05080          87 MEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH  161 (283)
T ss_pred             ecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccccCCcc
Confidence            999999999999854  358999999999999999999998   899999999999999999999999999998654322


Q ss_pred             Ccc--eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          508 GSQ--TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       508 ~~~--~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      ...  .....++..|+|||.+....++.++||||||++++||++|+.|+....... .....+.........+.+.++..
T Consensus       162 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  240 (283)
T cd05080         162 EYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMIGPKQGQMTVVRLIELLERG  240 (283)
T ss_pred             hhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhhcccccccchhhhhhhhhcC
Confidence            111  112235667999999988889999999999999999999999986433211 01111000000001111111111


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .....+......+.+++..|++++|++|||++++++.|+.
T Consensus       241 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~  280 (283)
T cd05080         241 MRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKE  280 (283)
T ss_pred             CCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence            1111122234578889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=6e-37  Score=317.99  Aligned_cols=262  Identities=27%  Similarity=0.396  Sum_probs=207.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCC----------------eEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETN----------------SYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQ  413 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~----------------~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~  413 (645)
                      ..+|...++||+|+||.||++.+...+                ..||+|.+.... ....+++.+|++++.+++|||+++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            457888999999999999999876533                568999987653 445678999999999999999999


Q ss_pred             EEeeeeeCCeEEEEEEecCCCChhhhhhhcC----------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCC
Q 042831          414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKEN----------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSN  483 (645)
Q Consensus       414 l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~N  483 (645)
                      ++++|..++..++|+||+++++|.+++.+..          ..+++..++.++.|++.||.|||+   .+++||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~N  160 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhc
Confidence            9999999999999999999999999986533          268999999999999999999998   899999999999


Q ss_pred             eEECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc--CCCCCCCCCCC
Q 042831          484 IMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC--GRKPINPKAPQ  560 (645)
Q Consensus       484 ILld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt--G~~pf~~~~~~  560 (645)
                      |+++.++.++|+|||+++........ ......++..|+|||++..+.++.++|||||||++|||++  |..||..... 
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~-  239 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD-  239 (296)
T ss_pred             eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh-
Confidence            99999999999999998755332211 1223456778999999988889999999999999999998  6777764332 


Q ss_pred             CchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          561 GQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       561 ~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        ..........+..+......+      .+......+.+++.+|++.||++|||+.|+++.|+
T Consensus       240 --~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         240 --QQVIENAGHFFRDDGRQIYLP------RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             --HHHHHHHHhccccccccccCC------CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence              222333332222221111111      11112256888999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.9e-37  Score=314.30  Aligned_cols=253  Identities=26%  Similarity=0.445  Sum_probs=200.9

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCC---CeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe-----
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRET---NSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE-----  423 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~---~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~-----  423 (645)
                      |...+.||+|+||.||+|.+..+   +..||+|+++..  .......+.+|++.+++++|+|++++++++...+.     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            45678999999999999998653   478999998754  33456789999999999999999999998866554     


Q ss_pred             -EEEEEEecCCCChhhhhhhc-----CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeec
Q 042831          424 -LLLVYEFMPNGSLDSHLFKE-----NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF  497 (645)
Q Consensus       424 -~~lV~Ey~~~gsL~~~l~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~Df  497 (645)
                       .++|+||+++|+|..++...     ...+++.....++.|++.||.|||+   .+++||||||+||++++++.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCc
Confidence             79999999999999888542     2468999999999999999999998   89999999999999999999999999


Q ss_pred             cCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcC
Q 042831          498 GLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGN  575 (645)
Q Consensus       498 Gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~  575 (645)
                      |+++........ ......++..|+|||.+....++.++|||||||++|||++ |..||......   .+.+++    ..
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~---~~~~~~----~~  230 (273)
T cd05035         158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH---EIYDYL----RH  230 (273)
T ss_pred             cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----Hc
Confidence            999865433221 1122334678999999988889999999999999999999 88998653321   222222    12


Q ss_pred             CccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          576 GKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       576 ~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      +...     ..    +......+.+++.+|++.||++||++.|+++.|..
T Consensus       231 ~~~~-----~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~  271 (273)
T cd05035         231 GNRL-----KQ----PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN  271 (273)
T ss_pred             CCCC-----CC----CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            2111     11    11223467888899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=5e-37  Score=316.40  Aligned_cols=254  Identities=28%  Similarity=0.476  Sum_probs=203.9

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEc-----CCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .+|...++||+|+||.||++...     .++..+|+|.+..........+.+|++++.+++|+||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            45677899999999999999753     3467899999877766777889999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcE
Q 042831          427 VYEFMPNGSLDSHLFKEN--------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA  492 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~  492 (645)
                      ||||+++++|.+++....              ..+++..+..++.|++.||+|||+   .+++||||||+|||+++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCE
Confidence            999999999999986532              358999999999999999999998   899999999999999999999


Q ss_pred             EEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHH
Q 042831          493 KIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVW  570 (645)
Q Consensus       493 kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~  570 (645)
                      ||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||......   .....  
T Consensus       162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~~--  236 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT---EAIEC--  236 (280)
T ss_pred             EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH---HHHHH--
Confidence            99999998755322211 1122334678999999998899999999999999999998 99998644322   11111  


Q ss_pred             HHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          571 DLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       571 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        ...+.-..  .+   ..+    ...+.+++.+||+.||++||+++++++.|+
T Consensus       237 --~~~~~~~~--~~---~~~----~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         237 --ITQGRELE--RP---RTC----PPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             --HHcCccCC--CC---CCC----CHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence              11111100  01   111    245678889999999999999999999885

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=6e-37  Score=312.96  Aligned_cols=256  Identities=26%  Similarity=0.382  Sum_probs=207.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|++|.||++....++..++||.+...   ......++.+|+.++.+++|+|++++++++..++..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            4677889999999999999999888999999987643   2344568889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          429 EFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       429 Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      ||+++++|.+++..   ....+++..++.++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence            99999999998853   34568999999999999999999998   8999999999999999999999999999876543


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      ... ......++..|+|||++.+..++.++|+||||+++|||++|..||...... ......    ..     .....+.
T Consensus       159 ~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~----~~-----~~~~~~~  227 (267)
T cd08229         159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCK----KI-----EQCDYPP  227 (267)
T ss_pred             CCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch-HHHHhh----hh-----hcCCCCC
Confidence            221 222346888999999998888999999999999999999999999643321 111111    11     1111111


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      +..   ......+.+++.+|++.||++||||.+|++.+.
T Consensus       228 ~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~  263 (267)
T cd08229         228 LPS---DHYSEELRQLVNMCINPDPEKRPDITYVYDVAK  263 (267)
T ss_pred             CCc---ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHh
Confidence            111   123346778889999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=2.2e-37  Score=319.97  Aligned_cols=264  Identities=25%  Similarity=0.328  Sum_probs=199.1

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhc---CCCCccEEEeeeee-----CC
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRL---RHRNLVQLLGWCHE-----KK  422 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l---~H~nlv~l~~~~~~-----~~  422 (645)
                      +|...+.||+|+||.||+|.+..+++.||+|.++...  ......+.+|++++.++   +||||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            4777899999999999999999999999999986532  22234556677777665   69999999998864     34


Q ss_pred             eEEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          423 ELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      ..++||||++ ++|.+++... ...+++..+..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++
T Consensus        81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg~~~  156 (288)
T cd07863          81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGLAR  156 (288)
T ss_pred             eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccCccc
Confidence            5899999997 5888887653 3458999999999999999999998   899999999999999999999999999998


Q ss_pred             cccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCc---c
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK---L  578 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~---l  578 (645)
                      ......  ......++..|+|||++.+..++.++|||||||++|||++|+.||......+   .............   .
T Consensus       157 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~~~  231 (288)
T cd07863         157 IYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD---QLGKIFDLIGLPPEDDW  231 (288)
T ss_pred             cccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH---HHHHHHHHhCCCChhhC
Confidence            654322  2233467899999999998899999999999999999999999997543321   1111111111000   0


Q ss_pred             c-------cccCcccc---CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          579 L-------EAVDPRLC---RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       579 ~-------~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .       ....+...   .....+..+.+.+++.+||+.||++|||+.|++.+.++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         232 PRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             cccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            0       00000000   00011123456788999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=2.7e-37  Score=318.57  Aligned_cols=253  Identities=26%  Similarity=0.400  Sum_probs=201.9

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCC-----CeEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRET-----NSYIAVKRVSQGSK-QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~-----~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      +|...++||+|+||.||+|.+..+     +..||+|+++.... ...+.+.+|+.++.+++||||+++++++...+..++
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~   85 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM   85 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence            456678899999999999987543     57899999975543 334678899999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhc---------------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc
Q 042831          427 VYEFMPNGSLDSHLFKE---------------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN  491 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~  491 (645)
                      ++||+++++|.+++...               ...+++..+..++.|++.||.|||+   .+++||||||+||++++++.
T Consensus        86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~  162 (283)
T cd05091          86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLN  162 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCc
Confidence            99999999999988521               2358889999999999999999998   89999999999999999999


Q ss_pred             EEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHH
Q 042831          492 AKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWV  569 (645)
Q Consensus       492 ~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~  569 (645)
                      +||+|||+++........ ......+++.|+|||.+..+.++.++|||||||++|||++ |..||......   ...   
T Consensus       163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~~~---  236 (283)
T cd05091         163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ---DVI---  236 (283)
T ss_pred             eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH---HHH---
Confidence            999999998765432221 1223345778999999988889999999999999999998 88888653321   111   


Q ss_pred             HHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          570 WDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       570 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                       +...++....         .+......+..++..|++.+|++||+++++++.|+
T Consensus       237 -~~i~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~  281 (283)
T cd05091         237 -EMIRNRQVLP---------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR  281 (283)
T ss_pred             -HHHHcCCcCC---------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence             2222222111         11122345778889999999999999999999986

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-37  Score=342.09  Aligned_cols=258  Identities=22%  Similarity=0.286  Sum_probs=210.4

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCCccEEEee-eee-----
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLGW-CHE-----  420 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~-~~~-----  420 (645)
                      .....++++.+.|.+|||+.||.+.+...|..+|+|++-..+++..+...+|+++|++|+ |+|||.+++. ...     
T Consensus        33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~  112 (738)
T KOG1989|consen   33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN  112 (738)
T ss_pred             EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence            344556778899999999999999999877999999987778889999999999999997 9999999993 221     


Q ss_pred             -CCeEEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeecc
Q 042831          421 -KKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG  498 (645)
Q Consensus       421 -~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfG  498 (645)
                       .-+.+|.||||++|.|-+++..+ ...|++.++++|+.|+++|+++||. +..+|||||||-+||||..+++.||||||
T Consensus       113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFG  191 (738)
T KOG1989|consen  113 GVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFG  191 (738)
T ss_pred             ceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCccc
Confidence             23689999999999999999743 3459999999999999999999998 56789999999999999999999999999


Q ss_pred             CcccccccCCcce--------eecccCccccCcccc---ccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHH
Q 042831          499 LARLVEHAKGSQT--------TVLAGTMGYMAPECA---TTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQ  567 (645)
Q Consensus       499 la~~~~~~~~~~~--------~~~~gt~~y~aPE~~---~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~  567 (645)
                      .+.-.-.......        -...-|+.|+|||.+   .+..+++|+|||+|||+||-|+....||+....        
T Consensus       192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--------  263 (738)
T KOG1989|consen  192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--------  263 (738)
T ss_pred             ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--------
Confidence            9864332221110        112358899999976   567799999999999999999999999985422        


Q ss_pred             HHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          568 WVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       568 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                                 ..+++....-.-......++..||..||++||++||++-||++.+..
T Consensus       264 -----------laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~  310 (738)
T KOG1989|consen  264 -----------LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFE  310 (738)
T ss_pred             -----------eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence                       12223322222224577889999999999999999999999988863

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=4.6e-37  Score=315.84  Aligned_cols=240  Identities=27%  Similarity=0.425  Sum_probs=191.1

Q ss_pred             ccCcCCcEEEEEEEEcCC------------------------CeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEE
Q 042831          359 KLGQGGFGGVYKGFFRET------------------------NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQL  414 (645)
Q Consensus       359 ~LG~G~fG~Vy~g~~~~~------------------------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l  414 (645)
                      .||+|+||.||+|.+..+                        ...|++|.+..........+.+|+.++++++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            699999999999986321                        24589998876555556778899999999999999999


Q ss_pred             EeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC----
Q 042831          415 LGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF----  490 (645)
Q Consensus       415 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~----  490 (645)
                      +++|......++||||+++|+|..++.+....+++..+..++.||++||+|||+   ++|+||||||+|||++..+    
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~~~~~  158 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARLGLAEG  158 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccCcccC
Confidence            999999999999999999999999987766789999999999999999999998   8999999999999997643    


Q ss_pred             ---cEEEeeccCcccccccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHH-cCCCCCCCCCCCCchhH
Q 042831          491 ---NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSL  565 (645)
Q Consensus       491 ---~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~ell-tG~~pf~~~~~~~~~~l  565 (645)
                         .+|++|||++......     ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||......+..  
T Consensus       159 ~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~--  231 (274)
T cd05076         159 TSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE--  231 (274)
T ss_pred             ccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH--
Confidence               3899999987643211     12346788999998865 56899999999999999995 699999754432211  


Q ss_pred             HHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          566 LQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       566 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                       ..    ....       ..+....    ...+.+++.+||+.+|++||++.++++.|.
T Consensus       232 -~~----~~~~-------~~~~~~~----~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         232 -RF----YEKK-------HRLPEPS----CKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             -HH----HHhc-------cCCCCCC----ChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence             11    1110       0111111    135778889999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-37  Score=316.86  Aligned_cols=259  Identities=25%  Similarity=0.376  Sum_probs=211.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|...+.||+|++|.||+|.+..++..+|+|.+........+.+.+|++++++++|+|++++++.+..+...++||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            35688889999999999999999888999999999877666778899999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +++++|.+++.+.+..+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++....... ..
T Consensus        84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~  159 (280)
T cd06611          84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-QK  159 (280)
T ss_pred             cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhcccc-cc
Confidence            99999999987766779999999999999999999998   899999999999999999999999999987543322 22


Q ss_pred             eeecccCccccCccccc-----cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          511 TTVLAGTMGYMAPECAT-----TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~-----~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      .....++..|++||.+.     ...++.++|+||||+++|||++|+.||.......  .+.    . ...+..     +.
T Consensus       160 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~--~~~----~-~~~~~~-----~~  227 (280)
T cd06611         160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR--VLL----K-ILKSEP-----PT  227 (280)
T ss_pred             cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH--HHH----H-HhcCCC-----CC
Confidence            23356889999999874     3446789999999999999999999997543211  111    1 111111     11


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      +..  +......+.+++..||+.+|++||++++++++.+...
T Consensus       228 ~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~  267 (280)
T cd06611         228 LDQ--PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD  267 (280)
T ss_pred             cCC--cccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence            100  1112235667889999999999999999999988654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=2.3e-37  Score=322.82  Aligned_cols=254  Identities=30%  Similarity=0.432  Sum_probs=201.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCe--EEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNS--YIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~--~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .++|+..+.||+|+||.||+|.+..++.  .+++|.+... .....+++.+|++++.++ +|+||+++++++..++..++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l   85 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   85 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence            3578888999999999999999877664  4688877643 344567889999999999 89999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc
Q 042831          427 VYEFMPNGSLDSHLFKEN---------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN  491 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~  491 (645)
                      ||||+++++|.+++.+..               ..+++.+++.++.|++.||+|||+   .+++||||||+|||++.++.
T Consensus        86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~  162 (303)
T cd05088          86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYV  162 (303)
T ss_pred             EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCc
Confidence            999999999999986432               357899999999999999999998   89999999999999999999


Q ss_pred             EEEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHH
Q 042831          492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVW  570 (645)
Q Consensus       492 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~  570 (645)
                      +||+|||+++.....  .......++..|+|||++....++.++|||||||+++||++ |..||......   ...+.  
T Consensus       163 ~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~--  235 (303)
T cd05088         163 AKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELYEK--  235 (303)
T ss_pred             EEeCccccCcccchh--hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH---HHHHH--
Confidence            999999998643211  11112234567999999988889999999999999999998 99999644321   11111  


Q ss_pred             HHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          571 DLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       571 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                        ...+.     ..    .........+.+++.+|++.+|++||++.++++.|..
T Consensus       236 --~~~~~-----~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~  279 (303)
T cd05088         236 --LPQGY-----RL----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  279 (303)
T ss_pred             --HhcCC-----cC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence              11110     00    0111122356788999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=1.2e-36  Score=313.75  Aligned_cols=266  Identities=23%  Similarity=0.254  Sum_probs=209.6

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +|...+.||+|++|.||+|.+..+|+.|++|++....  ......+.+|+.++++++|||++++++++..+...++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            4777889999999999999998889999999987553  34457889999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      + +++|.+++......+++.+++.++.||++||.|||+   .+++|+||||+||+++.++.++|+|||++..........
T Consensus        81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~  156 (286)
T cd07832          81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRL  156 (286)
T ss_pred             c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCc
Confidence            9 999999987766789999999999999999999998   899999999999999999999999999998665433222


Q ss_pred             eeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcc-----------
Q 042831          511 TTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL-----------  578 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l-----------  578 (645)
                      .....++..|+|||.+.+. .++.++||||+|++++||++|+.||......   ....++.........           
T Consensus       157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (286)
T cd07832         157 YSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI---EQLAIVFRTLGTPNEETWPGLTSLPD  233 (286)
T ss_pred             cccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH---HHHHHHHHHcCCCChHHHhhccCcch
Confidence            3345688999999988654 4689999999999999999998888644321   222222221111000           


Q ss_pred             -ccccCcccc----CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          579 -LEAVDPRLC----RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       579 -~~~~d~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                       .....+.-.    .+...+....+.+++.+|++++|++||+++++++|.++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~  285 (286)
T cd07832         234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF  285 (286)
T ss_pred             hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCc
Confidence             000000000    00001123677889999999999999999999999875

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=5.2e-37  Score=312.02  Aligned_cols=245  Identities=27%  Similarity=0.427  Sum_probs=195.7

Q ss_pred             ccCcCCcEEEEEEEE--cCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCC
Q 042831          359 KLGQGGFGGVYKGFF--RETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNG  434 (645)
Q Consensus       359 ~LG~G~fG~Vy~g~~--~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~g  434 (645)
                      +||+|+||.||+|.+  ..++..+|+|+++...  ....+++.+|+.++.+++|+||+++++++. .+..++||||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            689999999999975  3567899999886443  345678999999999999999999999885 45679999999999


Q ss_pred             ChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc--ee
Q 042831          435 SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ--TT  512 (645)
Q Consensus       435 sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~--~~  512 (645)
                      +|.+++... ..+++..+..++.|++.||.|||+   ++++||||||+||+++.++.+||+|||+++.........  ..
T Consensus        81 ~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  156 (257)
T cd05116          81 PLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT  156 (257)
T ss_pred             cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence            999998543 468999999999999999999998   899999999999999999999999999998664332211  11


Q ss_pred             ecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          513 VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       513 ~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ...++..|+|||.+....++.++|+|||||++|||++ |+.||......   .+.+    ...++....     ....  
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~----~i~~~~~~~-----~~~~--  222 (257)
T cd05116         157 HGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN---EVTQ----MIESGERME-----CPQR--  222 (257)
T ss_pred             CCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHCCCCCC-----CCCC--
Confidence            2234578999999988889999999999999999998 99999754321   1222    222222111     1111  


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          592 GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        ....+.+++.+|+++||++||++.+|.+.|+
T Consensus       223 --~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~  253 (257)
T cd05116         223 --CPPEMYDLMKLCWTYGVDERPGFAVVELRLR  253 (257)
T ss_pred             --CCHHHHHHHHHHhccCchhCcCHHHHHHHHh
Confidence              2245678889999999999999999999986

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1.3e-37  Score=327.49  Aligned_cols=246  Identities=24%  Similarity=0.329  Sum_probs=194.8

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHH-HHHhcCCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVK-IISRLRHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~-~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.||+|+||.||+|++..+++.||+|.+....   .....++..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999999999999999986432   223345556654 57889999999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |+|..++.. ...+++.....++.||++||.|||+   .+|+||||||+||+++.++.+||+|||+++..... ......
T Consensus        81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~~  155 (321)
T cd05603          81 GELFFHLQR-ERCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP-EETTST  155 (321)
T ss_pred             CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC-CCcccc
Confidence            999888754 4568888899999999999999998   89999999999999999999999999998753221 122334


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..|++.|+|||++.+..++.++|||||||++|||++|+.||......   .+.+    ....+..      .+    +..
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~----~i~~~~~------~~----~~~  218 (321)
T cd05603         156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS---QMYD----NILHKPL------QL----PGG  218 (321)
T ss_pred             ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH---HHHH----HHhcCCC------CC----CCC
Confidence            57899999999999888999999999999999999999999754311   1111    1111111      11    111


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCH----HHHHHHhcc
Q 042831          594 QIERLMIVGLWCAHPDENLRPSI----RQVIHVLNF  625 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RPs~----~evl~~L~~  625 (645)
                      ....+.+++.+||+.||++||+.    .|++++.++
T Consensus       219 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~  254 (321)
T cd05603         219 KTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFF  254 (321)
T ss_pred             CCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCc
Confidence            23456788899999999999875    477777665

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=4.5e-37  Score=314.54  Aligned_cols=254  Identities=28%  Similarity=0.481  Sum_probs=204.2

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCe---EEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNS---YIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~---~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      +|...+.||+|+||.||+|.+..++.   .||+|.+... .....++|..|+.++++++|||++++++++..++..++||
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   84 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT   84 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence            46778899999999999999876554   6999998754 3445678999999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++++|.+++......+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++........
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~  161 (269)
T cd05065          85 EFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS  161 (269)
T ss_pred             ecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence            9999999999997666778999999999999999999998   8999999999999999999999999999876543222


Q ss_pred             cce--eecc--cCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          509 SQT--TVLA--GTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       509 ~~~--~~~~--gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ...  ....  .+..|+|||.+..+.++.++|||||||++||+++ |+.||......   ....++.    .+.     .
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i~----~~~-----~  229 (269)
T cd05065         162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAIE----QDY-----R  229 (269)
T ss_pred             ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHHH----cCC-----c
Confidence            111  1111  1357999999998999999999999999999886 99999653321   2222221    110     0


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .....    +....+.+++..|++.+|++||++++++..|+.
T Consensus       230 ~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  267 (269)
T cd05065         230 LPPPM----DCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK  267 (269)
T ss_pred             CCCcc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            00011    123456788899999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1e-36  Score=309.92  Aligned_cols=256  Identities=24%  Similarity=0.372  Sum_probs=210.2

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|...+.||+|+||.||+|....+++.+++|.+........+.+.+|++++++++|||++++++++..++..+++|||+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~   82 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC   82 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence            57888899999999999999998888999999998766666788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++++|.+++......+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++....... ...
T Consensus        83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~  158 (262)
T cd06613          83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-AKR  158 (262)
T ss_pred             CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhh-hcc
Confidence            9999999987665779999999999999999999998   899999999999999999999999999987654321 122


Q ss_pred             eecccCccccCccccccC---CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          512 TVLAGTMGYMAPECATTG---KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~---~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ....++..|+|||.+...   .++.++|+||||+++|||++|+.||.........      .. ......   ..+.+. 
T Consensus       159 ~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~------~~-~~~~~~---~~~~~~-  227 (262)
T cd06613         159 KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL------FL-ISKSNF---PPPKLK-  227 (262)
T ss_pred             ccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH------HH-HHhccC---CCcccc-
Confidence            335678899999998776   7899999999999999999999999754321111      00 001100   011111 


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHh
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL  623 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  623 (645)
                       ........+.+++.+|++.+|++|||+.+++.+-
T Consensus       228 -~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~  261 (262)
T cd06613         228 -DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHP  261 (262)
T ss_pred             -chhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence             1123345678899999999999999999999763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=2.1e-37  Score=331.21  Aligned_cols=258  Identities=24%  Similarity=0.347  Sum_probs=202.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|+..+.||+|+||.||++....+++.||+|++...   .......+.+|+.++.+++|+|++++++.+.+++..++||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            3688889999999999999999999999999998643   2334567888999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++.+. ..+++.....++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus        81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~  156 (360)
T cd05627          81 EFLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR  156 (360)
T ss_pred             eCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence            999999999998643 468999999999999999999998   9999999999999999999999999999875432110


Q ss_pred             ----------------------------------cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCC
Q 042831          509 ----------------------------------SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPI  554 (645)
Q Consensus       509 ----------------------------------~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf  554 (645)
                                                        .......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf  236 (360)
T cd05627         157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF  236 (360)
T ss_pred             cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence                                              0012346999999999999999999999999999999999999999


Q ss_pred             CCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCC---CHHHHHHHhccCC
Q 042831          555 NPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRP---SIRQVIHVLNFEA  627 (645)
Q Consensus       555 ~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---s~~evl~~L~~~~  627 (645)
                      .......   ...    ..........+.+..  ..+    ..+.+++.+|+ .||++|+   +++|+++|.++..
T Consensus       237 ~~~~~~~---~~~----~i~~~~~~~~~p~~~--~~s----~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~  298 (360)
T cd05627         237 CSETPQE---TYR----KVMNWKETLVFPPEV--PIS----EKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEG  298 (360)
T ss_pred             CCCCHHH---HHH----HHHcCCCceecCCCC--CCC----HHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCC
Confidence            7544321   111    111111000111111  112    23444555555 4999998   5899999998753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.2e-37  Score=311.74  Aligned_cols=258  Identities=24%  Similarity=0.308  Sum_probs=213.4

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      +.|+..+.||+|.-|+||++.+.+++..+|+|++.+.   .++...+...|-+||+.++||.++.|+..++.++..||||
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            4566688999999999999999999999999999765   3455667788999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc--
Q 042831          429 EFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH--  505 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~--  505 (645)
                      |||+||+|....+++ ++.+++..++-++..++-||+|||-   .|||.|||||+||||.++|++-|+||.|+.....  
T Consensus       157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~~~P  233 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP  233 (459)
T ss_pred             ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence            999999999988754 6789999999999999999999999   9999999999999999999999999998653210  


Q ss_pred             -------------------------------c-C---------------------CcceeecccCccccCccccccCCCC
Q 042831          506 -------------------------------A-K---------------------GSQTTVLAGTMGYMAPECATTGKAS  532 (645)
Q Consensus       506 -------------------------------~-~---------------------~~~~~~~~gt~~y~aPE~~~~~~~t  532 (645)
                                                     . .                     +..+..++||-.|+|||++.+...+
T Consensus       234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg  313 (459)
T KOG0610|consen  234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG  313 (459)
T ss_pred             eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence                                           0 0                     0111235799999999999999999


Q ss_pred             cchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCC
Q 042831          533 KESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENL  612 (645)
Q Consensus       533 ~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~  612 (645)
                      .+.|.|+|||+||||+.|+.||.+.+..+..  ..    ...+       +.++..  .......+.+||+..|.+||++
T Consensus       314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl--~N----Iv~~-------~l~Fp~--~~~vs~~akDLIr~LLvKdP~k  378 (459)
T KOG0610|consen  314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKETL--RN----IVGQ-------PLKFPE--EPEVSSAAKDLIRKLLVKDPSK  378 (459)
T ss_pred             chhhHHHHHHHHHHHHhCCCCcCCCCchhhH--HH----HhcC-------CCcCCC--CCcchhHHHHHHHHHhccChhh
Confidence            9999999999999999999999876654321  11    1111       111111  1134566778999999999999


Q ss_pred             CCC----HHHHHHHhccCC
Q 042831          613 RPS----IRQVIHVLNFEA  627 (645)
Q Consensus       613 RPs----~~evl~~L~~~~  627 (645)
                      |-.    +.||-+|.-|+.
T Consensus       379 Rlg~~rGA~eIK~HpFF~g  397 (459)
T KOG0610|consen  379 RLGSKRGAAEIKRHPFFEG  397 (459)
T ss_pred             hhccccchHHhhcCccccC
Confidence            998    999999998763

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=6.8e-37  Score=323.58  Aligned_cols=260  Identities=20%  Similarity=0.270  Sum_probs=202.4

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...++||+|+||.||++++..+++.+|+|.+...   .......+..|+.++..++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            4688899999999999999999999999999998642   2223455888999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++.+....+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||++........
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~  157 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT  157 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence            9999999999997766779999999999999999999998   9999999999999999999999999999875533322


Q ss_pred             cceeecccCccccCccccc-----cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          509 SQTTVLAGTMGYMAPECAT-----TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~-----~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      .......||+.|+|||++.     .+.++.++|||||||++|||++|+.||.....      .+............ .+ 
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~------~~~~~~i~~~~~~~-~~-  229 (332)
T cd05623         158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHKERF-QF-  229 (332)
T ss_pred             ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH------HHHHHHHhCCCccc-cC-
Confidence            2333457999999999886     34578999999999999999999999975432      11111111111000 01 


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCC--CCCCCCCCHHHHHHHhccC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAH--PDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~--~dP~~RPs~~evl~~L~~~  626 (645)
                      +......+    ..+.+++.+|+.  +++..||+++|+++|.++.
T Consensus       230 p~~~~~~s----~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~  270 (332)
T cd05623         230 PAQVTDVS----EDAKDLIRRLICSREHRLGQNGIEDFKQHPFFT  270 (332)
T ss_pred             CCccccCC----HHHHHHHHHHccChhhhcCCCCHHHHhCCCCcC
Confidence            11111122    334455566554  4445579999999998764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.4e-37  Score=320.68  Aligned_cols=257  Identities=21%  Similarity=0.283  Sum_probs=209.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh---hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK---QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|++|.||++....+++.+|+|.+.....   ...+.+..|++++.+++|+||+++++.+...+..++||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            368888999999999999999998899999999875432   35667899999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          429 EFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      ||+.+++|.+++... +..+++..+..++.|+++||.|||.   .+++|+||||+||+++.++.++|+|||++.......
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~  157 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP  157 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence            999999999988653 4578999999999999999999998   899999999999999999999999999987543221


Q ss_pred             Cc----------------------------ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC
Q 042831          508 GS----------------------------QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAP  559 (645)
Q Consensus       508 ~~----------------------------~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~  559 (645)
                      ..                            ......|+..|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~  237 (316)
T cd05574         158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR  237 (316)
T ss_pred             cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence            10                            11124678899999999988899999999999999999999999975432


Q ss_pred             CCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCC----HHHHHHHhccC
Q 042831          560 QGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPS----IRQVIHVLNFE  626 (645)
Q Consensus       560 ~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs----~~evl~~L~~~  626 (645)
                      ..   ..   .... ....      ..  .........+.+++.+|++.||++||+    ++|++.+.++.
T Consensus       238 ~~---~~---~~~~-~~~~------~~--~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~  293 (316)
T cd05574         238 DE---TF---SNIL-KKEV------TF--PGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFR  293 (316)
T ss_pred             HH---HH---HHHh-cCCc------cC--CCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhh
Confidence            21   11   1111 1110      00  001113457788889999999999999    99999998765

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=3.6e-37  Score=316.74  Aligned_cols=252  Identities=25%  Similarity=0.425  Sum_probs=206.1

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      .|+..+.||+|+||.||+|.+..++..||+|.+.... ....+.+.+|++++++++||||+++++++..++..++||||+
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence            3555678999999999999998889999999987543 345567899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++++|.+++..  ..+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.++|+|||++....... ...
T Consensus        85 ~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~~  158 (277)
T cd06642          85 GGGSALDLLKP--GPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKR  158 (277)
T ss_pred             CCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcc-hhh
Confidence            99999988843  468999999999999999999998   899999999999999999999999999987654322 122


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ....++..|+|||++.+..++.++|||||||+++||++|+.|+....+...   .   .. ...+     ..+.+.    
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~---~---~~-~~~~-----~~~~~~----  222 (277)
T cd06642         159 NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV---L---FL-IPKN-----SPPTLE----  222 (277)
T ss_pred             hcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH---H---hh-hhcC-----CCCCCC----
Confidence            234578899999999988899999999999999999999999874432211   1   10 1111     112221    


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          592 GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ......+.+++.+|++.+|++||+|.+++++.+..
T Consensus       223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~  257 (277)
T cd06642         223 GQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFIT  257 (277)
T ss_pred             cccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHH
Confidence            22345677888999999999999999999988754

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-36  Score=314.73  Aligned_cols=261  Identities=25%  Similarity=0.412  Sum_probs=202.9

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCC--------------CeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRET--------------NSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLL  415 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~--------------~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~  415 (645)
                      .++|...++||+|+||.||++...++              ...||+|.++.. .......+.+|++++.+++|+|+++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            35788899999999999999987543              235899998765 334456799999999999999999999


Q ss_pred             eeeeeCCeEEEEEEecCCCChhhhhhhcC-----------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCe
Q 042831          416 GWCHEKKELLLVYEFMPNGSLDSHLFKEN-----------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI  484 (645)
Q Consensus       416 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NI  484 (645)
                      +++...+..++||||+++++|.+++....           ..+++..++.++.|++.||+|||+   .+++|+||||+||
T Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Ni  160 (295)
T cd05097          84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNC  160 (295)
T ss_pred             EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhE
Confidence            99999999999999999999999885421           247899999999999999999998   8999999999999


Q ss_pred             EECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc--CCCCCCCCCCCC
Q 042831          485 MLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC--GRKPINPKAPQG  561 (645)
Q Consensus       485 Lld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt--G~~pf~~~~~~~  561 (645)
                      ++++++.+||+|||++......... ......++..|+|||++..+.++.++|||||||+++||++  |..||...... 
T Consensus       161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~-  239 (295)
T cd05097         161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE-  239 (295)
T ss_pred             EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH-
Confidence            9999999999999998755332211 1122345678999999998899999999999999999988  66777643322 


Q ss_pred             chhHHHHHHHHhcC-CccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          562 QVSLLQWVWDLYGN-GKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       562 ~~~l~~~~~~~~~~-~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        ............ +.......+.       .....+.+++.+|++.||++||+|.+|++.|.
T Consensus       240 --~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         240 --QVIENTGEFFRNQGRQIYLSQTP-------LCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             --HHHHHHHHhhhhccccccCCCCC-------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence              122222221111 1111111111       12247888999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.4e-36  Score=309.77  Aligned_cols=257  Identities=26%  Similarity=0.384  Sum_probs=208.9

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|++|.||+|....+|+.||+|.++..   .....+.+.+|++++++++|+|++++++++...+..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            5788899999999999999999988999999988632   2334678899999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          429 EFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       429 Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      ||+++++|.+++..   .+..+++.++..++.+++.||.|||+   .+++|+||+|+||+++.++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence            99999999998853   34568999999999999999999998   8999999999999999999999999999876543


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      ... ......++..|+|||.+.+..++.++|||||||++|||++|+.||......    ..+.. +....+...     .
T Consensus       159 ~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~-~~~~~~~~~-----~  227 (267)
T cd08224         159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLC-KKIEKCDYP-----P  227 (267)
T ss_pred             CCc-ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc----HHHHH-hhhhcCCCC-----C
Confidence            221 223346888999999998888999999999999999999999999643321    11111 111111111     1


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      +.   .......+.+++.+||+++|++||++.++++.|..
T Consensus       228 ~~---~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~  264 (267)
T cd08224         228 LP---ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKE  264 (267)
T ss_pred             CC---hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHH
Confidence            10   11233467788899999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=7.1e-37  Score=323.98  Aligned_cols=256  Identities=24%  Similarity=0.308  Sum_probs=216.6

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh---hhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK---QGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~~l  426 (645)
                      ...|...+.||+|.||.||+++.+.+|+.+|+|.+.+...   .....+.+|+.+|+++. |||++++.+.++.....++
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l  113 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL  113 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence            4567888999999999999999999999999999976533   34568899999999998 9999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC----CCcEEEeeccCccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS----NFNAKIGDFGLARL  502 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~----~~~~kl~DfGla~~  502 (645)
                      |||++.+|.|.+.+...  .+++.....++.|++.++.|||+   .+|+||||||+|+|+..    ++.+|++|||++..
T Consensus       114 vmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~  188 (382)
T KOG0032|consen  114 VMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF  188 (382)
T ss_pred             EEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence            99999999999999766  39999999999999999999999   99999999999999953    35799999999997


Q ss_pred             ccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      ...  .......+||+.|+|||++....++..+||||+||++|.|++|..||..........       ....++.    
T Consensus       189 ~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-------~i~~~~~----  255 (382)
T KOG0032|consen  189 IKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-------AILRGDF----  255 (382)
T ss_pred             ccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-------HHHcCCC----
Confidence            765  456677899999999999999999999999999999999999999998765432211       1222322    


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                        .+..+.-....+.+..++..|+..||.+|+|+.++++|.|-.
T Consensus       256 --~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~  297 (382)
T KOG0032|consen  256 --DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIK  297 (382)
T ss_pred             --CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcccc
Confidence              111222222345667788999999999999999999999854

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=6.6e-37  Score=326.65  Aligned_cols=268  Identities=21%  Similarity=0.248  Sum_probs=203.4

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC------
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK------  421 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~------  421 (645)
                      ..++|...+.||+|+||.||++.+..+++.||+|++...  .....+.+.+|+.+++.++||||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            457899999999999999999999888999999998753  334456788999999999999999999988643      


Q ss_pred             CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          422 KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      ...++||||+++ +|...+.   ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~~~  167 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  167 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHh---hcCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCcccc
Confidence            357999999965 5655553   247899999999999999999998   999999999999999999999999999997


Q ss_pred             cccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchh-HH--------------
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVS-LL--------------  566 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~-l~--------------  566 (645)
                      .....  .......||..|+|||++.+..++.++|||||||++|||++|+.||......+... ..              
T Consensus       168 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (355)
T cd07874         168 TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL  245 (355)
T ss_pred             cCCCc--cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence            64322  12233568999999999998889999999999999999999999997543211100 00              


Q ss_pred             -HHHHHHhcC-CccccccCcccc--------CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          567 -QWVWDLYGN-GKLLEAVDPRLC--------RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       567 -~~~~~~~~~-~~l~~~~d~~l~--------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                       ..+.....+ ........+...        ..........+.+++.+|++.||++|||+.|++++.+..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~  315 (355)
T cd07874         246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYIN  315 (355)
T ss_pred             cHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchh
Confidence             000000000 000000000000        001111235678899999999999999999999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=1.2e-37  Score=328.44  Aligned_cols=247  Identities=25%  Similarity=0.288  Sum_probs=196.7

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHH-HHHhcCCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVK-IISRLRHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~-~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.||+|+||.||+++...+|+.+|+|++...   .....+++..|.. +++.++||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            4699999999999999999999999998643   2233455666665 46778999999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |+|..++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... ......
T Consensus        81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~  155 (325)
T cd05604          81 GELFFHLQR-ERSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDTTTT  155 (325)
T ss_pred             CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCCccc
Confidence            999888754 4568999999999999999999998   89999999999999999999999999998743221 122334


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..|+..|+|||++.+..++.++|||||||++|||++|+.||......   .+.    .....+.+      .+....   
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~---~~~----~~~~~~~~------~~~~~~---  219 (325)
T cd05604         156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA---EMY----DNILHKPL------VLRPGA---  219 (325)
T ss_pred             ccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH---HHH----HHHHcCCc------cCCCCC---
Confidence            57899999999999999999999999999999999999999754321   111    11111111      111112   


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHH----HHHHHhccC
Q 042831          594 QIERLMIVGLWCAHPDENLRPSIR----QVIHVLNFE  626 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RPs~~----evl~~L~~~  626 (645)
                       ...+.+++..|++.+|++||+++    +++++.++.
T Consensus       220 -~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~  255 (325)
T cd05604         220 -SLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFE  255 (325)
T ss_pred             -CHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcC
Confidence             23556788899999999999875    788877764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=1.2e-36  Score=308.80  Aligned_cols=252  Identities=25%  Similarity=0.365  Sum_probs=205.4

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee-CCeEEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE-KKELLLVYE  429 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~-~~~~~lV~E  429 (645)
                      +|+..+.||+|++|.||++....+++.+|+|++...  .....+.+.+|++++++++|+|++++++.+.. +...++|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            477889999999999999999988999999998643  33455678899999999999999999998764 446899999


Q ss_pred             ecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          430 FMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       430 y~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |+++++|.+++... ...+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++....... 
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~-  156 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC-  156 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence            99999999998763 4568999999999999999999998   899999999999999999999999999998664322 


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      .......+++.|+|||.+.+..++.++||||||++++||++|+.||......      ...... ..+.+     +.+  
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~------~~~~~~-~~~~~-----~~~--  222 (257)
T cd08223         157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN------SLVYRI-IEGKL-----PPM--  222 (257)
T ss_pred             CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH------HHHHHH-HhcCC-----CCC--
Confidence            2233456788999999999988999999999999999999999999743311      111111 12221     111  


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        .......+.+++.+|++.+|++||++.+++++.+
T Consensus       223 --~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~  256 (257)
T cd08223         223 --PKDYSPELGELIATMLSKRPEKRPSVKSILRQPY  256 (257)
T ss_pred             --ccccCHHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence              1123346778899999999999999999998865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=9.6e-37  Score=311.32  Aligned_cols=241  Identities=26%  Similarity=0.452  Sum_probs=192.3

Q ss_pred             CccCcCCcEEEEEEEEcCC------------CeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          358 QKLGQGGFGGVYKGFFRET------------NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~------------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      +.||+|+||.||+|+....            ...|++|.+..........+.+|+.++.+++||||+++++++..+...+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            4689999999999986422            2368999876655555668889999999999999999999999999999


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc-------EEEeecc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN-------AKIGDFG  498 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~-------~kl~DfG  498 (645)
                      +||||+++|+|+.++......+++..+..++.||++||.|||+   ++|+||||||+|||++.++.       +|++|||
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g  157 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG  157 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence            9999999999999887666779999999999999999999998   89999999999999987664       8999999


Q ss_pred             CcccccccCCcceeecccCccccCccccc-cCCCCcchhHHHHHHHHHHHH-cCCCCCCCCCCCCchhHHHHHHHHhcCC
Q 042831          499 LARLVEHAKGSQTTVLAGTMGYMAPECAT-TGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNG  576 (645)
Q Consensus       499 la~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~t~~sDV~SfGvll~ell-tG~~pf~~~~~~~~~~l~~~~~~~~~~~  576 (645)
                      ++......     ....++..|+|||++. ...++.++|||||||++|||+ .|+.|+......+.    ..   .. .+
T Consensus       158 ~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~----~~---~~-~~  224 (262)
T cd05077         158 IPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK----ER---FY-EG  224 (262)
T ss_pred             CCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH----HH---HH-hc
Confidence            98654321     2235778899999887 456899999999999999998 58888764332111    11   11 11


Q ss_pred             ccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       577 ~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ..      .....    ....+..++.+||+.||++||+++++++.++
T Consensus       225 ~~------~~~~~----~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         225 QC------MLVTP----SCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             Cc------cCCCC----ChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence            11      01111    1245678889999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=1.6e-36  Score=312.07  Aligned_cols=252  Identities=23%  Similarity=0.380  Sum_probs=209.1

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      .|+..++||+|+||.||+|.+..++..||+|.+... .......+.+|+.++++++|+|++++++.+.+++..++||||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            466778999999999999999888999999998754 3455678999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++++|.+++..  ..+++.+...++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++....... ...
T Consensus        85 ~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~  158 (277)
T cd06640          85 GGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKR  158 (277)
T ss_pred             CCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCc-ccc
Confidence            99999998853  468899999999999999999998   899999999999999999999999999997654322 122


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ....++..|+|||++.+...+.++|+|||||++|||++|+.||....+....      .. .         .........
T Consensus       159 ~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~------~~-~---------~~~~~~~~~  222 (277)
T cd06640         159 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL------FL-I---------PKNNPPTLT  222 (277)
T ss_pred             ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh------hh-h---------hcCCCCCCc
Confidence            3346788999999998888999999999999999999999999754322111      00 0         001111223


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          592 GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ......+.+++..||+.+|++||++++++++.+..
T Consensus       223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~  257 (277)
T cd06640         223 GEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIV  257 (277)
T ss_pred             hhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhh
Confidence            34456778899999999999999999999998754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=5.5e-37  Score=316.35  Aligned_cols=265  Identities=24%  Similarity=0.310  Sum_probs=201.0

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +|+..+.||+|++|.||+|+...+++.||+|.++...  ....+.+.+|+.++.+++|||++++++++..++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            4777889999999999999999889999999986432  23346788999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          431 MPNGSLDSHLFKE--NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       431 ~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ++ ++|.+++...  +..+++..+..++.||++||.|||+   .+++|+||||+||+++.++.+||+|||++....... 
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-  155 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV-  155 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence            97 6888887542  3578999999999999999999998   899999999999999999999999999987553221 


Q ss_pred             cceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC---C------cc
Q 042831          509 SQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN---G------KL  578 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~---~------~l  578 (645)
                      .......++..|+|||.+.+. .++.++|||||||+++||++|+.||........  +.... .....   .      .+
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~  232 (285)
T cd07861         156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ--LFRIF-RILGTPTEDVWPGVTSL  232 (285)
T ss_pred             ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHH-HHhCCCChhhhhcchhh
Confidence            112233568899999988654 478999999999999999999999975432111  10000 00000   0      00


Q ss_pred             ---ccccCccccC---CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          579 ---LEAVDPRLCR---DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       579 ---~~~~d~~l~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                         ....+.....   .........+.+++.+||+.||++|||+++++.+.++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         233 PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             HHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence               0000000000   0000112456788999999999999999999988663

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=3.2e-37  Score=324.84  Aligned_cols=252  Identities=23%  Similarity=0.334  Sum_probs=202.0

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      +|+..+.||+|+||.||++....+++.||+|++...   .....+.+..|..++..+. |++|+++++++...+..++||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            467788999999999999999999999999998753   2234566788999998886 577888999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++... ..+++.++..++.||+.||.|||+   .+++||||||+|||++.++.+||+|||+++..... .
T Consensus        81 Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~-~  155 (323)
T cd05615          81 EYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD-G  155 (323)
T ss_pred             cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCCC-C
Confidence            999999999888543 468999999999999999999998   89999999999999999999999999998753221 1


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      .......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+.+.+.    ++..      ....
T Consensus       156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~---~~~~~i~----~~~~------~~p~  222 (323)
T cd05615         156 VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED---ELFQSIM----EHNV------SYPK  222 (323)
T ss_pred             ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH---HHHHHHH----hCCC------CCCc
Confidence            2233456899999999999888999999999999999999999999754321   1222111    1111      1111


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPS-----IRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~~  626 (645)
                      .    ....+.+++.+||+.+|.+|++     .+++++|.++.
T Consensus       223 ~----~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~  261 (323)
T cd05615         223 S----LSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFR  261 (323)
T ss_pred             c----CCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccC
Confidence            1    2245677889999999999997     47788876654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.3e-37  Score=315.09  Aligned_cols=255  Identities=27%  Similarity=0.456  Sum_probs=205.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCC-----CeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRET-----NSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~-----~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~  424 (645)
                      .++|...+.||+|+||.||+|.....     +..||+|.+.... ......+.+|+.++.+++|+|++++++++......
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            45788889999999999999998643     3789999986553 34456788999999999999999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhc---------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEe
Q 042831          425 LLVYEFMPNGSLDSHLFKE---------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG  495 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~  495 (645)
                      ++||||+++|+|.+++...         ...+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+
T Consensus        85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~  161 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIG  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEEC
Confidence            9999999999999998642         2347899999999999999999998   899999999999999999999999


Q ss_pred             eccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHh
Q 042831          496 DFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLY  573 (645)
Q Consensus       496 DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~  573 (645)
                      |||+++....... .......++..|+|||.+.++.++.++|||||||++||+++ |+.||......   ....+    .
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---~~~~~----~  234 (277)
T cd05032         162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE---EVLKF----V  234 (277)
T ss_pred             CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH---HHHHH----H
Confidence            9999876543322 12223456788999999988889999999999999999998 99998643321   12221    1


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ..+....     ....    ....+.+++.+||+.+|++|||+.++++.|+
T Consensus       235 ~~~~~~~-----~~~~----~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         235 IDGGHLD-----LPEN----CPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             hcCCCCC-----CCCC----CCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            1221111     1111    2356788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=6.5e-37  Score=319.31  Aligned_cols=258  Identities=27%  Similarity=0.390  Sum_probs=205.3

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEE-----cCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCC
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFF-----RETNSYIAVKRVSQGS-KQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKK  422 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~-----~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~  422 (645)
                      ..++|...+.||+|+||.||++..     ..++..||+|+++... ....+.+.+|+++++++ +|+||++++++|...+
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  112 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG  112 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence            345788899999999999999975     2345689999987543 33456789999999999 7999999999999999


Q ss_pred             eEEEEEEecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          423 ELLLVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      ..++||||+++|+|.+++.... ..+++.++..++.|++.||.|||+   ++++|+||||+|||++.++.+||+|||+++
T Consensus       113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~  189 (302)
T cd05055         113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLAR  189 (302)
T ss_pred             ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCcccc
Confidence            9999999999999999987543 348999999999999999999998   899999999999999999999999999997


Q ss_pred             cccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccc
Q 042831          502 LVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLL  579 (645)
Q Consensus       502 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~  579 (645)
                      ........ ......++..|+|||.+....++.++|||||||++|||++ |+.||......+  ....    ....+.. 
T Consensus       190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~--~~~~----~~~~~~~-  262 (302)
T cd05055         190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS--KFYK----LIKEGYR-  262 (302)
T ss_pred             cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH--HHHH----HHHcCCc-
Confidence            65432211 1112345678999999999899999999999999999998 999987543221  1111    1111110 


Q ss_pred             cccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       580 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                          +.    ........+.+++.+|++++|++||++.|+++.|..
T Consensus       263 ----~~----~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~  300 (302)
T cd05055         263 ----MA----QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK  300 (302)
T ss_pred             ----CC----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence                00    011123467888999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=1.1e-36  Score=311.22  Aligned_cols=255  Identities=26%  Similarity=0.438  Sum_probs=201.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-----ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee--CCeE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-----SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKEL  424 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~--~~~~  424 (645)
                      .+|...+.||+|+||.||+|....++..|++|++...     ..+..+.+.+|+.++++++||||+++++++.+  ....
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            4788899999999999999999988999999988643     22345678899999999999999999998875  3578


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++++||+++++|.+++... ..+++...+.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++...
T Consensus        82 ~l~~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~  157 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAY-GALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ  157 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence            9999999999999998643 458999999999999999999998   899999999999999999999999999987653


Q ss_pred             ccC--CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          505 HAK--GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       505 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      ...  ........++..|+|||++.+..++.++|||||||++|||++|+.||......      ..........     .
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~------~~~~~~~~~~-----~  226 (266)
T cd06651         158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM------AAIFKIATQP-----T  226 (266)
T ss_pred             cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH------HHHHHHhcCC-----C
Confidence            221  11122345788999999998888999999999999999999999999753221      1111111111     1


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .+.+..    ...+.+..++ .|+..+|++||+++|+++|.+++
T Consensus       227 ~~~~~~----~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         227 NPQLPS----HISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             CCCCch----hcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence            122211    1122333343 68889999999999999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-36  Score=308.22  Aligned_cols=248  Identities=31%  Similarity=0.493  Sum_probs=204.6

Q ss_pred             CccCcCCcEEEEEEEEcCC---CeEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRET---NSYIAVKRVSQGSKQ-GIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~---~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.||+|+||.||+|.....   +..|++|.+...... ..+.+.+|++.+.+++|+|++++++++......++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            4699999999999999865   889999998765433 367899999999999999999999999999999999999999


Q ss_pred             CChhhhhhhc--------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          434 GSLDSHLFKE--------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       434 gsL~~~l~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      ++|.+++...        ...+++..++.++.|++.||.|||+   ++++|+||||+||++++++.+||+|||.+.....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence            9999999765        4779999999999999999999998   9999999999999999999999999999987654


Q ss_pred             cCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          506 AKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       506 ~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ... .......++..|+|||.+....++.++||||||++++||++ |+.||......   .+    .+...++...    
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~----~~~~~~~~~~----  226 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE---EV----LEYLRKGYRL----  226 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH---HH----HHHHHcCCCC----
Confidence            321 12233457889999999988889999999999999999999 69999765321   11    1222221111    


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                       .    ........+.+++.+|++.+|++|||+.|++++|+
T Consensus       227 -~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         227 -P----KPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             -C----CCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence             1    11112356778889999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=4e-37  Score=332.33  Aligned_cols=261  Identities=25%  Similarity=0.366  Sum_probs=204.9

Q ss_pred             HHHhhcCCCCCCccCcCCcEEEEEEEEcC-----CCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcC-CCCccEEEeeee
Q 042831          347 LALATNDFNDDQKLGQGGFGGVYKGFFRE-----TNSYIAVKRVSQGS-KQGIKEYASEVKIISRLR-HRNLVQLLGWCH  419 (645)
Q Consensus       347 l~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~  419 (645)
                      .....++|...++||+|+||.||+|++.+     +++.||+|++.... ....+.+.+|++++.++. ||||++++++|.
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            34445677888999999999999999643     45689999997543 333457889999999997 999999999999


Q ss_pred             eCCeEEEEEEecCCCChhhhhhhcC-------------------------------------------------------
Q 042831          420 EKKELLLVYEFMPNGSLDSHLFKEN-------------------------------------------------------  444 (645)
Q Consensus       420 ~~~~~~lV~Ey~~~gsL~~~l~~~~-------------------------------------------------------  444 (645)
                      ..+..++|+||+++|+|.+++++.+                                                       
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP  191 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence            9999999999999999999886421                                                       


Q ss_pred             ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCC
Q 042831          445 ------------------------------------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS  482 (645)
Q Consensus       445 ------------------------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~  482 (645)
                                                                ..+++.....++.||+.||.|||+   .+++||||||+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~  268 (401)
T cd05107         192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAAR  268 (401)
T ss_pred             hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcc
Confidence                                                      246788889999999999999998   89999999999


Q ss_pred             CeEECCCCcEEEeeccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCC
Q 042831          483 NIMLDSNFNAKIGDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQ  560 (645)
Q Consensus       483 NILld~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~  560 (645)
                      |||+++++.+||+|||+++....... .......++..|+|||.+....++.++|||||||++|||++ |+.||......
T Consensus       269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~  348 (401)
T cd05107         269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN  348 (401)
T ss_pred             eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence            99999999999999999986532221 11122356788999999998889999999999999999998 89998643321


Q ss_pred             CchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          561 GQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       561 ~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      +      ........+..     +.    .+......+.+++..||+.+|++||+++++++.|+.
T Consensus       349 ~------~~~~~~~~~~~-----~~----~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~  398 (401)
T cd05107         349 E------QFYNAIKRGYR-----MA----KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD  398 (401)
T ss_pred             H------HHHHHHHcCCC-----CC----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            1      11111112211     00    111123467788899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=2.1e-37  Score=315.13  Aligned_cols=241  Identities=28%  Similarity=0.474  Sum_probs=193.3

Q ss_pred             CccCcCCcEEEEEEEEcCCCe-------EEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          358 QKLGQGGFGGVYKGFFRETNS-------YIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~-------~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +.||+|+||.||+|.....+.       .+++|.+........+.+.+|+.++.+++|||++++++++..++..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            469999999999999865443       4888888665556667889999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc--------EEEeeccCccc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN--------AKIGDFGLARL  502 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~--------~kl~DfGla~~  502 (645)
                      +++|+|..++...+..+++..+..++.||+.||.|||+   .+|+||||||+||+++.++.        ++++|||++..
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            99999999997766678999999999999999999998   99999999999999987765        69999998864


Q ss_pred             ccccCCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCC-CCCCCCCCCCchhHHHHHHHHhcCCcccc
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGR-KPINPKAPQGQVSLLQWVWDLYGNGKLLE  580 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~-~pf~~~~~~~~~~l~~~~~~~~~~~~l~~  580 (645)
                      ...     .....++..|+|||++.+. .++.++||||||+++|||++|. .|+.......   ...    .....    
T Consensus       158 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~---~~~----~~~~~----  221 (258)
T cd05078         158 VLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK---KLQ----FYEDR----  221 (258)
T ss_pred             cCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH---HHH----HHHcc----
Confidence            432     1234578899999999874 5799999999999999999985 5554322211   011    11110    


Q ss_pred             ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       581 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                         ..+    +......+.+++..||+.||++|||++++++.|+
T Consensus       222 ---~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         222 ---HQL----PAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             ---ccC----CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence               011    1112245778889999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-36  Score=308.90  Aligned_cols=249  Identities=30%  Similarity=0.452  Sum_probs=204.6

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|...+.||+|++|.||+|...  |+.||+|.+..... ..+++.+|+.++.+++|+|++++++++...+..++||||
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   81 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY   81 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence            457788899999999999999875  68899999976644 567899999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      +++++|.+++.... ..+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++....... 
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-  157 (256)
T cd05039          82 MAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-  157 (256)
T ss_pred             cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEcccccccccccccc-
Confidence            99999999986543 368999999999999999999998   9999999999999999999999999999986532211 


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                         ....+..|+|||.+..+.++.++||||||++++|+++ |+.||......   .+..    ....+..     ..   
T Consensus       158 ---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~----~~~~~~~-----~~---  219 (256)
T cd05039         158 ---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVP----HVEKGYR-----ME---  219 (256)
T ss_pred             ---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH---HHHH----HHhcCCC-----CC---
Confidence               2334667999999988899999999999999999997 99998754321   1111    1111110     01   


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                       .+......+.+++.+||+.+|++||+++++++.|+.
T Consensus       220 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         220 -APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             -CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence             111123567788999999999999999999999863

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.1e-36  Score=329.32  Aligned_cols=267  Identities=22%  Similarity=0.264  Sum_probs=204.6

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcC--CCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRE--TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~--~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ..+|...+.||+|+||.||++...+  ++..||+|.+...     +...+|++++++++||||+++++++...+..++||
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            4579999999999999999997643  4678999987543     23457999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |++. ++|.+++ .....+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.......
T Consensus       166 e~~~-~~l~~~l-~~~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~  240 (392)
T PHA03207        166 PKYK-CDLFTYV-DRSGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD  240 (392)
T ss_pred             hhcC-CCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence            9995 6888887 445679999999999999999999998   8999999999999999999999999999976543322


Q ss_pred             -cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc-------
Q 042831          509 -SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE-------  580 (645)
Q Consensus       509 -~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~-------  580 (645)
                       .......||..|+|||++....++.++|||||||++|||++|+.||...........+..+...........       
T Consensus       241 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~  320 (392)
T PHA03207        241 TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTN  320 (392)
T ss_pred             cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchh
Confidence             223346799999999999998999999999999999999999999976543322111111111111000000       


Q ss_pred             ------ccCccccCCCC-------HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          581 ------AVDPRLCRDFD-------GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       581 ------~~d~~l~~~~~-------~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                            .........+.       ......+..++.+||+.||++|||+.|++.+.++..
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~  380 (392)
T PHA03207        321 LCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTK  380 (392)
T ss_pred             HHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhc
Confidence                  00000000000       001234567788999999999999999999999864

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=7e-37  Score=318.16  Aligned_cols=256  Identities=23%  Similarity=0.369  Sum_probs=209.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      .+|+..+.||.|++|.||+|....+++.|++|.+........+.+.+|+++++.++|||++++++++...+..++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            45888899999999999999998889999999987665555678889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++++|..++..  ..+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++........ ..
T Consensus        99 ~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~  172 (296)
T cd06655          99 AGGSLTDVVTE--TCMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-KR  172 (296)
T ss_pred             CCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhcccccc-cC
Confidence            99999998853  358999999999999999999998   8999999999999999999999999999876543221 22


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ....++..|+|||.+.+..++.++|||||||++|||++|+.||.........   ...   ...+ .     +.+.  ..
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~---~~~---~~~~-~-----~~~~--~~  238 (296)
T cd06655         173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL---YLI---ATNG-T-----PELQ--NP  238 (296)
T ss_pred             CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHH---HhcC-C-----cccC--Cc
Confidence            2346888999999999888999999999999999999999999754432111   111   1111 0     0010  01


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          592 GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ......+.+++.+||+.||++||++.+++++-++..
T Consensus       239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~  274 (296)
T cd06655         239 EKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKL  274 (296)
T ss_pred             ccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhh
Confidence            112235667889999999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=6.5e-37  Score=310.70  Aligned_cols=252  Identities=28%  Similarity=0.510  Sum_probs=203.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      .+|+..+.||+|+||.||++.+.. +..+|+|.+.... ....++.+|++++++++|||++++++++......++||||+
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM   81 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence            457778899999999999998864 6689999886442 23457889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++++|.+++......++++.+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++..........
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~  158 (256)
T cd05112          82 EHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSS  158 (256)
T ss_pred             CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCccccc
Confidence            9999999987666678999999999999999999998   8999999999999999999999999999875533222112


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      ....++.+|+|||.+.++.++.++||||||+++|||++ |+.||......   .+.+   . ..++.  ....+..    
T Consensus       159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~~~~---~-~~~~~--~~~~~~~----  225 (256)
T cd05112         159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS---EVVE---T-INAGF--RLYKPRL----  225 (256)
T ss_pred             CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH---HHHH---H-HhCCC--CCCCCCC----
Confidence            22335678999999998889999999999999999998 99999743321   1111   1 11111  1111222    


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                         ..+.+.+++.+||+.+|++||++.|+++.|.
T Consensus       226 ---~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         226 ---ASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             ---CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence               2356888999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=1.6e-36  Score=307.86  Aligned_cols=252  Identities=23%  Similarity=0.349  Sum_probs=208.6

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +|+..+.||+|+||.||.++...+++.+++|.+...  .....+++.+|++++++++|+|++++++++.+.+..+++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            477889999999999999999999999999987643  345567889999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      +++++|.+++.+. ...+++.++..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++........ 
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-  156 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-  156 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence            9999999998764 4568999999999999999999998   8999999999999999999999999999986543331 


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      ......++..|+|||.+.+...+.++||||||++++||++|+.||......      +..... ..+.....        
T Consensus       157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~-~~~~~~~~--------  221 (256)
T cd08221         157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL------NLVVKI-VQGNYTPV--------  221 (256)
T ss_pred             cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH------HHHHHH-HcCCCCCC--------
Confidence            223456889999999998888899999999999999999999999753321      111111 12222111        


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                       .......+.+++.+|++.+|++||++.++++++.
T Consensus       222 -~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~  255 (256)
T cd08221         222 -VSVYSSELISLVHSLLQQDPEKRPTADEVLDQPL  255 (256)
T ss_pred             -ccccCHHHHHHHHHHcccCcccCCCHHHHhhCcC
Confidence             1122345778889999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=1.3e-36  Score=309.57  Aligned_cols=252  Identities=30%  Similarity=0.461  Sum_probs=200.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|...++||+|++|.||++.+..+ ..+|+|.+.... ...+.+.+|++++++++|+|++++++++. .+..++||||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   82 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM   82 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence            4577788999999999999998764 469999876443 23467889999999999999999999875 45688999999


Q ss_pred             CCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          432 PNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       432 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      ++++|.+++.+. ...+++..+..++.|++.||.|||+   .+++|+||||+||++++++.+||+|||+++.........
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~  159 (260)
T cd05069          83 GKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA  159 (260)
T ss_pred             CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCcccc
Confidence            999999999754 3458999999999999999999998   899999999999999999999999999997654332222


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      .....++..|+|||...+..++.++||||||+++|||++ |+.||......   ....+    ...+..     +    .
T Consensus       160 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~----~~~~~~-----~----~  223 (260)
T cd05069         160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR---EVLEQ----VERGYR-----M----P  223 (260)
T ss_pred             cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH----HHcCCC-----C----C
Confidence            222345678999999988899999999999999999999 89999754321   11111    111110     0    1


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .+......+.+++.+||++||++||+++++++.|+.
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         224 CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            111233567788899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.2e-36  Score=314.04  Aligned_cols=265  Identities=23%  Similarity=0.340  Sum_probs=208.0

Q ss_pred             cChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeee-
Q 042831          342 FPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCH-  419 (645)
Q Consensus       342 ~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~-  419 (645)
                      +.++.+..+.++|+..+.||+|+||.||++.+..+++.+|+|.+.... ....++.+|+.++.++ +|+|++++++++. 
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            445666778899999999999999999999999889999999876432 2235678899999999 6999999999874 


Q ss_pred             ----eCCeEEEEEEecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcE
Q 042831          420 ----EKKELLLVYEFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA  492 (645)
Q Consensus       420 ----~~~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~  492 (645)
                          .++..++||||+++++|.+++..   .+..+++..+..++.|+++||.|||+   .+++||||||+||+++.++.+
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~  163 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGV  163 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCE
Confidence                34578999999999999988753   34568999999999999999999998   899999999999999999999


Q ss_pred             EEeeccCcccccccCCcceeecccCccccCcccccc-----CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHH
Q 042831          493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT-----GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQ  567 (645)
Q Consensus       493 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~  567 (645)
                      ||+|||+++...... .......|+..|+|||++..     ..++.++|||||||++|||++|+.||........  +. 
T Consensus       164 kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~--~~-  239 (286)
T cd06638         164 KLVDFGVSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA--LF-  239 (286)
T ss_pred             EEccCCceeecccCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH--Hh-
Confidence            999999987654322 12233468999999998753     3478899999999999999999999975432111  00 


Q ss_pred             HHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          568 WVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       568 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                         .. ..+......++..       ....+..++.+|++.||++|||++|+++++++
T Consensus       240 ---~~-~~~~~~~~~~~~~-------~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         240 ---KI-PRNPPPTLHQPEL-------WSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             ---hc-cccCCCcccCCCC-------cCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence               00 0111001111111       12357788899999999999999999998763

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=2.2e-36  Score=317.30  Aligned_cols=263  Identities=19%  Similarity=0.274  Sum_probs=191.6

Q ss_pred             CCccCcCCcEEEEEEEEcC--CCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeee--CCeEEEEEEecC
Q 042831          357 DQKLGQGGFGGVYKGFFRE--TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMP  432 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~--~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~--~~~~~lV~Ey~~  432 (645)
                      .++||+|+||.||+|+..+  +++.+|+|.+....  ....+.+|++++++++||||+++++++..  +...++||||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            5689999999999999753  56889999986442  23457789999999999999999998854  457899999985


Q ss_pred             CCChhhhhhhc--------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE----CCCCcEEEeeccCc
Q 042831          433 NGSLDSHLFKE--------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML----DSNFNAKIGDFGLA  500 (645)
Q Consensus       433 ~gsL~~~l~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl----d~~~~~kl~DfGla  500 (645)
                       ++|..++...        ...+++..+..++.||+.||.|||+   .+|+||||||+|||+    +.++.+||+|||++
T Consensus        84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence             5787776421        2358999999999999999999998   899999999999999    45678999999999


Q ss_pred             ccccccCC--cceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc------hhHHHHHHH
Q 042831          501 RLVEHAKG--SQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQ------VSLLQWVWD  571 (645)
Q Consensus       501 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~------~~l~~~~~~  571 (645)
                      +.......  .......+|+.|+|||++.+. .++.++||||+||+++||++|+.||........      ....+.+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~  239 (317)
T cd07868         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN  239 (317)
T ss_pred             eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHH
Confidence            87643221  122345789999999998764 589999999999999999999999975432211      111111111


Q ss_pred             HhcCC---------------ccccccCccccCCC---------CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          572 LYGNG---------------KLLEAVDPRLCRDF---------DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       572 ~~~~~---------------~l~~~~d~~l~~~~---------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..+..               ..............         ....-..+.+++.+||+.||++|||++|+++|.++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         240 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             hcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            11100               00000000000000         00001346788999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.9e-36  Score=312.62  Aligned_cols=261  Identities=30%  Similarity=0.383  Sum_probs=210.1

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|+..+.||+|+||.||++....+++.||+|.+.... ....+++.+|++++..++||||+++++++...+.+++||||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            56777899999999999999999889999999886543 34567899999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +++++|.+++.+ ...+++.....++.+++.||.|||+  ..+++||||||+||++++++.++|+|||++......   .
T Consensus        85 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~---~  158 (284)
T cd06620          85 MDCGSLDRIYKK-GGPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS---I  158 (284)
T ss_pred             CCCCCHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh---c
Confidence            999999988754 3468999999999999999999997  257999999999999999999999999998654221   1


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCC-----chhHHHHHHHHhcCCccccccCcc
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQG-----QVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~-----~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      .....|+..|+|||++.++.++.++|+|||||++|||++|+.||.......     ...+.++........      .+.
T Consensus       159 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  232 (284)
T cd06620         159 ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP------PPR  232 (284)
T ss_pred             cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc------CCC
Confidence            223568999999999988889999999999999999999999998544321     111222222211110      111


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      +..   .+....+.+++.+|+++||++|||+.|+++++++..
T Consensus       233 ~~~---~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~  271 (284)
T cd06620         233 LPS---SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ  271 (284)
T ss_pred             CCc---hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence            111   112345778889999999999999999999987653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.6e-36  Score=308.28  Aligned_cols=248  Identities=29%  Similarity=0.469  Sum_probs=198.1

Q ss_pred             CccCcCCcEEEEEEEEcCCC---eEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRETN---SYIAVKRVSQGSK-QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~---~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      ++||+|+||.||+|++...+   ..+|+|.+..... ...+++.+|+.+++++.|+|++++++++. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            47999999999999876544   7899999875543 35678899999999999999999999876 4568999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCccee-
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT-  512 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~-  512 (645)
                      ++|.+++.... .+++..+..++.|++.||.|||.   .+++|+||||+|||++.++.+||+|||+++........... 
T Consensus        80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~  155 (257)
T cd05060          80 GPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT  155 (257)
T ss_pred             CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence            99999996544 78999999999999999999998   89999999999999999999999999999866433322111 


Q ss_pred             -ecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          513 -VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       513 -~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                       ...++..|+|||.+....++.++||||||+++|||++ |+.||.....   ..+..++    ..+....         .
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~---~~~~~~~----~~~~~~~---------~  219 (257)
T cd05060         156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG---AEVIAML----ESGERLP---------R  219 (257)
T ss_pred             cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH---HHHHHHH----HcCCcCC---------C
Confidence             1223467999999998899999999999999999998 9999975432   1222222    1111110         1


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .......+.+++.+|++++|++||++.++++.|+..
T Consensus       220 ~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         220 PEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            111234677899999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=7.5e-39  Score=302.38  Aligned_cols=256  Identities=21%  Similarity=0.326  Sum_probs=210.3

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      +++|+..+.||+|.|+.||++.+..+|+.+|+|.+...  +..+.+++.+|+.+.+.|+||||++|.+.+...+..+||+
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF   89 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   89 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence            45677788999999999999999999999999987533  3346788899999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC---CCCcEEEeeccCcccccc
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD---SNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld---~~~~~kl~DfGla~~~~~  505 (645)
                      |+|.+++|-.-+.++ ...++......++||+++|.|+|.   ++|||||+||+|++|-   ..--+||+|||+|..+. 
T Consensus        90 e~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-  164 (355)
T KOG0033|consen   90 DLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-  164 (355)
T ss_pred             ecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEEeC-
Confidence            999999997666443 456788888999999999999999   9999999999999994   33458999999998765 


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                       .+......+||++|||||+++..+++..+|||+.||+||-|+.|+.||.+....   .    +++.+..|...  +++.
T Consensus       165 -~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~---r----lye~I~~g~yd--~~~~  234 (355)
T KOG0033|consen  165 -DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---R----LYEQIKAGAYD--YPSP  234 (355)
T ss_pred             -CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH---H----HHHHHhccccC--CCCc
Confidence             445556688999999999999999999999999999999999999999754322   1    23333333321  1221


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .-.    ...+....|+.+||..||.+|.|+.|+|.|.|-
T Consensus       235 ~w~----~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi  270 (355)
T KOG0033|consen  235 EWD----TVTPEAKSLIRRMLTVNPKKRITADEALKHPWI  270 (355)
T ss_pred             ccC----cCCHHHHHHHHHHhccChhhhccHHHHhCCchh
Confidence            111    123455678899999999999999999999984

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=1e-36  Score=311.37  Aligned_cols=256  Identities=24%  Similarity=0.380  Sum_probs=204.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|...++||+|+||.||+|++..+++.||+|.++.........+.+|+.++..++|||++++++.+...+..++|+||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            46777889999999999999999899999999987665555667889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++++|.+++.. ...+++.+...++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++....... ...
T Consensus        89 ~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-~~~  163 (267)
T cd06645          89 GGGSLQDIYHV-TGPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI-AKR  163 (267)
T ss_pred             CCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc-ccc
Confidence            99999998854 3468999999999999999999998   899999999999999999999999999987553221 222


Q ss_pred             eecccCccccCccccc---cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          512 TVLAGTMGYMAPECAT---TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~---~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ....|+..|+|||++.   .+.++.++|+|||||++|||++|+.||....+...      +.... .....   .+....
T Consensus       164 ~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~------~~~~~-~~~~~---~~~~~~  233 (267)
T cd06645         164 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA------LFLMT-KSNFQ---PPKLKD  233 (267)
T ss_pred             ccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh------HHhhh-ccCCC---CCcccc
Confidence            3456899999999874   45688999999999999999999999864432211      11110 11110   111111


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ..  .....+.+++.+|++.+|++||++++++++.+
T Consensus       234 ~~--~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         234 KM--KWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             cC--CCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence            00  11235678889999999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.5e-36  Score=310.10  Aligned_cols=252  Identities=25%  Similarity=0.427  Sum_probs=203.3

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh---------hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK---------QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE  423 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~---------~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~  423 (645)
                      +|...+.||+|++|.||+|.+..+++.+|+|.+.....         +..+.+.+|+.++++++||||+++++++.+.+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            36677899999999999999988889999998864321         223568899999999999999999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      .++|+||+++++|.+++... ..+++..+..++.|++.||.|||+   .+++||||+|+||++++++.+||+|||+++..
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~  156 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKKL  156 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence            99999999999999998543 568899999999999999999998   89999999999999999999999999998866


Q ss_pred             cccCC-----cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcc
Q 042831          504 EHAKG-----SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL  578 (645)
Q Consensus       504 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l  578 (645)
                      .....     .......|+..|+|||.+.+..++.++|+|||||++|||++|+.||......      ..+.... .   
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~-~---  226 (267)
T cd06628         157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL------QAIFKIG-E---  226 (267)
T ss_pred             ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH------HHHHHHh-c---
Confidence            42211     1112245788999999999888999999999999999999999999753221      1111110 1   


Q ss_pred             ccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          579 LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       579 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        ...+.+..    .....+..++.+||++||++||++.|++++.+
T Consensus       227 --~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~  266 (267)
T cd06628         227 --NASPEIPS----NISSEAIDFLEKTFEIDHNKRPTAAELLKHPF  266 (267)
T ss_pred             --cCCCcCCc----ccCHHHHHHHHHHccCCchhCcCHHHHhhCCC
Confidence              11122211    22356677889999999999999999998765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=9.7e-37  Score=315.60  Aligned_cols=259  Identities=27%  Similarity=0.442  Sum_probs=204.0

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcC-----CCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRE-----TNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK  422 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~  422 (645)
                      ...++|+..++||+|+||.||+|..++     .+..||+|.+.... ......+.+|+.++.+++|+||+++++++...+
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ   82 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            346788999999999999999997652     35689999886543 234456889999999999999999999999999


Q ss_pred             eEEEEEEecCCCChhhhhhhc---------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEE
Q 042831          423 ELLLVYEFMPNGSLDSHLFKE---------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK  493 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~k  493 (645)
                      ..++||||+++|+|.+++...         ...+++..+..++.|++.||.|||+   ++++||||||+||++++++.+|
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~  159 (288)
T cd05061          83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVK  159 (288)
T ss_pred             CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEE
Confidence            999999999999999999642         1345678889999999999999998   8999999999999999999999


Q ss_pred             EeeccCcccccccCCcc-eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHH
Q 042831          494 IGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWD  571 (645)
Q Consensus       494 l~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~  571 (645)
                      |+|||+++......... .....++..|+|||.+..+.++.++|||||||++|||++ |+.||......   ...+    
T Consensus       160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~---~~~~----  232 (288)
T cd05061         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---QVLK----  232 (288)
T ss_pred             ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----
Confidence            99999987553322211 112234678999999998899999999999999999998 78888643321   1111    


Q ss_pred             HhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          572 LYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       572 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ....+...     ...    ......+.+++.+|++.||++|||+.++++.|...
T Consensus       233 ~~~~~~~~-----~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         233 FVMDGGYL-----DQP----DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             HHHcCCCC-----CCC----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence            11111111     111    11235788899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=2.9e-36  Score=313.29  Aligned_cols=266  Identities=24%  Similarity=0.302  Sum_probs=206.5

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-----hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-----QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      +|...+.||+|++|.||+|....+++.||+|.+.....     .....+..|++++.+++|+||+++++++.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            46778899999999999999988899999999875432     2345677899999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+ +++|.+++......+++..+..++.||++||.|||+   .+++|+||||+||+++.++.+||+|||+++......
T Consensus        81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~  156 (298)
T cd07841          81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN  156 (298)
T ss_pred             Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence            9999 999999986655579999999999999999999998   899999999999999999999999999998654332


Q ss_pred             CcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC---------Cc
Q 042831          508 GSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN---------GK  577 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~---------~~  577 (645)
                       .......++..|+|||.+.+ ..++.++|||||||+++||++|..||....+.+   ...........         ..
T Consensus       157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  232 (298)
T cd07841         157 -RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID---QLGKIFEALGTPTEENWPGVTS  232 (298)
T ss_pred             -ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH---HHHHHHHHcCCCchhhhhhccc
Confidence             12223346788999998855 457899999999999999999988876543221   11111111100         00


Q ss_pred             cccccCccccCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          578 LLEAVDPRLCRDFD-----GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       578 l~~~~d~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      +............+     ......+.+++.+||++||++|||+.|++++-++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~  286 (298)
T cd07841         233 LPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS  286 (298)
T ss_pred             ccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcccc
Confidence            00111100011111     12245678899999999999999999999998876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-36  Score=311.98  Aligned_cols=247  Identities=30%  Similarity=0.447  Sum_probs=195.6

Q ss_pred             CccCcCCcEEEEEEEEcCCCe--EEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNS--YIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~--~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.||+|+||.||+|++.+++.  .+++|.+... .....+.+.+|++++.++ +|||+++++++|...+..++||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            468999999999999987764  5688888643 345567889999999999 799999999999999999999999999


Q ss_pred             CChhhhhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeecc
Q 042831          434 GSLDSHLFKEN---------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG  498 (645)
Q Consensus       434 gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfG  498 (645)
                      |+|.+++....               ..+++.++..++.|++.||+|||+   .+++||||||+||++++++.+||+|||
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg  157 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFG  157 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCC
Confidence            99999986432               357899999999999999999998   899999999999999999999999999


Q ss_pred             CcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCc
Q 042831          499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGK  577 (645)
Q Consensus       499 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~  577 (645)
                      ++......  ........+..|+|||++....++.++|||||||+++||++ |+.||......   ...+    ....+.
T Consensus       158 l~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---~~~~----~~~~~~  228 (270)
T cd05047         158 LSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELYE----KLPQGY  228 (270)
T ss_pred             Cccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH---HHHH----HHhCCC
Confidence            98632211  11111223567999999988889999999999999999997 99999653321   1111    111111


Q ss_pred             cccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          578 LLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       578 l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..     ..    .......+.+++.+|++.+|.+|||+.++++.|..
T Consensus       229 ~~-----~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~  267 (270)
T cd05047         229 RL-----EK----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  267 (270)
T ss_pred             CC-----CC----CCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence            00     01    11122457788999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=7.7e-37  Score=316.11  Aligned_cols=255  Identities=27%  Similarity=0.436  Sum_probs=204.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcC-----CCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRE-----TNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~  424 (645)
                      .++|...+.||+|+||.||++.+..     ++..||+|.+.... ....+++.+|+.++++++|||+++++++|..+...
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            4678889999999999999998753     56889999987543 34557799999999999999999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhcC---------------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCC
Q 042831          425 LLVYEFMPNGSLDSHLFKEN---------------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSN  483 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~---------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~N  483 (645)
                      ++||||+++|+|.+++....                     ..+++..++.++.|++.||.|||+   .+++||||||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhh
Confidence            99999999999999986321                     247889999999999999999998   899999999999


Q ss_pred             eEECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCC
Q 042831          484 IMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQG  561 (645)
Q Consensus       484 ILld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~  561 (645)
                      |++++++.+||+|||+++........ .......+..|+|||.+....++.++|||||||++|||++ |..||...... 
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~-  239 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE-  239 (288)
T ss_pred             eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence            99999999999999998754332211 1122234667999999988899999999999999999997 88888643321 


Q ss_pred             chhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          562 QVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       562 ~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        ...    .....+.....         +......+.+++.+|++.+|++|||+.|+++.|+
T Consensus       240 --~~~----~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~  287 (288)
T cd05050         240 --EVI----YYVRDGNVLSC---------PDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ  287 (288)
T ss_pred             --HHH----HHHhcCCCCCC---------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence              111    11222322111         1112346778999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=1.4e-36  Score=308.25  Aligned_cols=250  Identities=22%  Similarity=0.334  Sum_probs=204.5

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      +|+..++||+|+||.||++.+..+++.+|+|.++.. .....+.+.+|+.++++++|+|++++++.+..++..++||||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            467789999999999999999989999999998643 3445677889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhh-cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          432 PNGSLDSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       432 ~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      ++++|.+++.. ....+++.....++.|++.||.|||+   .+++|+||||+||++++++.++|+|||++....... ..
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~  156 (255)
T cd08219          81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-AY  156 (255)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeecccc-cc
Confidence            99999998865 34568999999999999999999998   899999999999999999999999999987654322 12


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      .....++..|+|||++.+..++.++|+||||+++|+|++|+.||......      ...... ..+.... +        
T Consensus       157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~------~~~~~~-~~~~~~~-~--------  220 (255)
T cd08219         157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK------NLILKV-CQGSYKP-L--------  220 (255)
T ss_pred             cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH------HHHHHH-hcCCCCC-C--------
Confidence            23356888999999998888999999999999999999999999743321      111111 1221111 1        


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHV  622 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  622 (645)
                      +......+.+++.+||+.||++||++.+++..
T Consensus       221 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         221 PSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            11122356788899999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=1.1e-36  Score=310.06  Aligned_cols=252  Identities=28%  Similarity=0.457  Sum_probs=202.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|...++||+|+||.||+|...+ ++.||+|.+..... ...++.+|+.++++++|+|++++++++. .+..+++|||
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~-~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~   81 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYNG-HTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY   81 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecCC-CceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence            4568888999999999999998754 67899999865433 3467899999999999999999999874 4578999999


Q ss_pred             cCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      +++++|.+++... +..+++.++..++.|++.||.|||+   .+++||||||+||++++++.++|+|||++.........
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05067          82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc
Confidence            9999999988653 4578999999999999999999998   89999999999999999999999999999766533222


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ......++..|+|||++....++.++||||||++++||++ |+.||......   .....    ...+..     .....
T Consensus       159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~----~~~~~~-----~~~~~  226 (260)
T cd05067         159 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP---EVIQN----LERGYR-----MPRPD  226 (260)
T ss_pred             cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH---HHHHH----HHcCCC-----CCCCC
Confidence            2223345678999999998889999999999999999999 99999754321   11111    111111     01111


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                          .....+.+++.+|++.+|++||++++++..|+
T Consensus       227 ----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  258 (260)
T cd05067         227 ----NCPEELYELMRLCWKEKPEERPTFEYLRSVLE  258 (260)
T ss_pred             ----CCCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence                12246788899999999999999999999885

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=1.1e-36  Score=314.19  Aligned_cols=269  Identities=22%  Similarity=0.295  Sum_probs=205.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ++|+..+.||+|++|.||+|++..+++.||+|++....  ....+.+.+|++++.+++|+|++++++++......++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            46788899999999999999999889999999886432  2334568899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+++++|..++.. ...+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++........ 
T Consensus        81 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-  155 (286)
T cd07847          81 YCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-  155 (286)
T ss_pred             ccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCCcc-
Confidence            9999888776643 3468999999999999999999999   9999999999999999999999999999986643321 


Q ss_pred             ceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHH-H-------HHHhcCCcc-c
Q 042831          510 QTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQW-V-------WDLYGNGKL-L  579 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~-~-------~~~~~~~~l-~  579 (645)
                      ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+....... .       .+.+..... .
T Consensus       156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T cd07847         156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFK  235 (286)
T ss_pred             cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccc
Confidence            2233457889999998866 4578999999999999999999999975443221111100 0       000000000 0


Q ss_pred             cccCccccCCCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          580 EAVDPRLCRDFDG-----QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       580 ~~~d~~l~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....+......+.     .....+.+++.+|++++|++||++.|++.+.++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         236 GLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             cccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            0000110000010     113567789999999999999999999988764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.3e-36  Score=309.48  Aligned_cols=254  Identities=31%  Similarity=0.497  Sum_probs=205.2

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ..++|...++||+|+||.||+|.+.+ ++.+|||.+.... ...+++.+|++++++++|+|++++++++......++|||
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNG-TTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE   81 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcC-CceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence            45678889999999999999999864 5779999987543 345678999999999999999999999998899999999


Q ss_pred             ecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          430 FMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       430 y~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |+++++|.+++.+.. ..+++..+..++.|++.||.|||+   .+++|+||||+||++++++.+||+|||+++.......
T Consensus        82 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~  158 (261)
T cd05034          82 YMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY  158 (261)
T ss_pred             ccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence            999999999997643 578999999999999999999998   8999999999999999999999999999876643222


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      .......++..|+|||.+.+..++.++|+||||++++||++ |+.||......   ...+..    ..+.     ...  
T Consensus       159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~~~~~----~~~~-----~~~--  224 (261)
T cd05034         159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR---EVLEQV----ERGY-----RMP--  224 (261)
T ss_pred             hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----HcCC-----CCC--
Confidence            22222334568999999998889999999999999999998 99999643321   112211    1110     000  


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        .+......+.+++.+|++.+|++||+++++++.|+
T Consensus       225 --~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~  259 (261)
T cd05034         225 --RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLE  259 (261)
T ss_pred             --CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHh
Confidence              01111346788899999999999999999999886

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=2.1e-36  Score=319.09  Aligned_cols=261  Identities=20%  Similarity=0.266  Sum_probs=200.0

Q ss_pred             CCCccCcC--CcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          356 DDQKLGQG--GFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       356 ~~~~LG~G--~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ..++||+|  +|++||+++...+|+.||+|++....  ....+.+.+|+++++.++||||++++++|..++..++||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            35789999  78999999999999999999987542  334456778999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC-c
Q 042831          432 PNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-S  509 (645)
Q Consensus       432 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~-~  509 (645)
                      ++|+|.+++... ...+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.++++||+.......... .
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~  158 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL  158 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence            999999998653 3458999999999999999999998   8999999999999999999999999986543221110 0


Q ss_pred             -----ceeecccCccccCcccccc--CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          510 -----QTTVLAGTMGYMAPECATT--GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       510 -----~~~~~~gt~~y~aPE~~~~--~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                           ......++..|+|||++.+  ..++.++|||||||++|||++|+.||.......  ....    .. .+.+...+
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~----~~-~~~~~~~~  231 (327)
T cd08227         159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ--MLLE----KL-NGTVPCLL  231 (327)
T ss_pred             cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH--HHHH----Hh-cCCccccc
Confidence                 1122346778999999876  358899999999999999999999997533211  0000    00 01110000


Q ss_pred             -------------------Cccc-----------------cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          583 -------------------DPRL-----------------CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       583 -------------------d~~l-----------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                                         +..+                 ...........+.+++.+||+.||++|||++|++++.++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~  311 (327)
T cd08227         232 DTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK  311 (327)
T ss_pred             cccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhh
Confidence                               0000                 0011112234677899999999999999999999999875

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=5.8e-37  Score=321.21  Aligned_cols=256  Identities=26%  Similarity=0.421  Sum_probs=214.4

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcC----CCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRE----TNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE  423 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~----~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~  423 (645)
                      ...+.....++||.|.||.||+|.+..    ..-.||||..+.+ .....+.|++|..+|+.++||||++|+|.|.+ ..
T Consensus       386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P  464 (974)
T KOG4257|consen  386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QP  464 (974)
T ss_pred             eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cc
Confidence            334455667899999999999999853    2357999999875 44567889999999999999999999999975 57


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      .+||||.++-|.|..+|..++..|+......++.||..+|+|||+   ..+|||||..+|||+...-.+||+|||+++.+
T Consensus       465 ~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~  541 (974)
T KOG4257|consen  465 MWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYL  541 (974)
T ss_pred             eeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhc
Confidence            899999999999999999988899999999999999999999999   99999999999999999999999999999998


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      +...........-...|||||.+.-..++.+||||.|||++||++. |..||..-...+...       .+++|...   
T Consensus       542 ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~-------~iEnGeRl---  611 (974)
T KOG4257|consen  542 EDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG-------HIENGERL---  611 (974)
T ss_pred             cccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE-------EecCCCCC---
Confidence            8777666665556778999999999999999999999999999988 999998654432211       11233221   


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                            ..++.+...+..|..+||..||.+||.+.|+...|.
T Consensus       612 ------P~P~nCPp~LYslmskcWayeP~kRPrftei~~~ls  647 (974)
T KOG4257|consen  612 ------PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILS  647 (974)
T ss_pred             ------CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHH
Confidence                  222233456778889999999999999999887765

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=6.7e-37  Score=315.14  Aligned_cols=262  Identities=25%  Similarity=0.410  Sum_probs=206.1

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcC----CCeEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCCccEEEeeeee--CCeE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRE----TNSYIAVKRVSQGSKQ-GIKEYASEVKIISRLRHRNLVQLLGWCHE--KKEL  424 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~----~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~--~~~~  424 (645)
                      +.|...+.||+|+||.||++.+..    ++..+|+|.+...... ..+++.+|++++++++|+|++++++++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            356677899999999999999753    4789999998765443 56789999999999999999999999987  5678


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++||||+++++|.+++......+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++....
T Consensus        84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVLP  160 (284)
T ss_pred             EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence            99999999999999997766679999999999999999999998   899999999999999999999999999998765


Q ss_pred             ccCCcc--eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCch--------hHHHHHHHHhc
Q 042831          505 HAKGSQ--TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQV--------SLLQWVWDLYG  574 (645)
Q Consensus       505 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~--------~l~~~~~~~~~  574 (645)
                      ......  .....++..|++||.+.+..++.++||||||++++||++|+.|+.........        .......+...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd05038         161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK  240 (284)
T ss_pred             cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH
Confidence            322211  11234456799999998889999999999999999999999998643221100        00111111111


Q ss_pred             CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          575 NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       575 ~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .+..         ...+......+.+++.+|++.+|++||+|+|+++.|..
T Consensus       241 ~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05038         241 EGER---------LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR  282 (284)
T ss_pred             cCCc---------CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence            1110         01111222567889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2e-36  Score=312.59  Aligned_cols=257  Identities=25%  Similarity=0.406  Sum_probs=205.9

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|+..+.||+|+||.||++.+..++..||+|.+... .......+.+|++++.+++|+|++++++.+...+..++||||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            3577889999999999999999988999999988654 334457889999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          431 MPNGSLDSHLFKE--NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       431 ~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      +++++|..++...  ...+++..+..++.|++.||.|||+  ..+++|+||||+||+++.++.+||+|||++......  
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--  156 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS--  156 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--
Confidence            9999999888653  3478999999999999999999997  258999999999999999999999999998754321  


Q ss_pred             cceeecccCccccCccccccCC------CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          509 SQTTVLAGTMGYMAPECATTGK------ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~------~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                       ......++..|+|||.+.+..      ++.++|+|||||++|||++|+.||.......   ..... .....+.     
T Consensus       157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~-~~~~~~~-----  226 (286)
T cd06622         157 -LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN---IFAQL-SAIVDGD-----  226 (286)
T ss_pred             -ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh---HHHHH-HHHhhcC-----
Confidence             222345788999999886543      4889999999999999999999997543221   11111 1111111     


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .+.+    +......+..++.+|++.+|++||++++++.+.++.
T Consensus       227 ~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~  266 (286)
T cd06622         227 PPTL----PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLV  266 (286)
T ss_pred             CCCC----CcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhh
Confidence            1111    122345567888999999999999999999998864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=6.7e-37  Score=316.03  Aligned_cols=270  Identities=25%  Similarity=0.342  Sum_probs=207.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ++|+..++||+|++|.||+|.+.++++.|++|.++..  .....+.+.+|++++++++|+|++++++++..++..++|||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            3678889999999999999999988999999988643  23345788999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |++++.+..+. .....+++..+..++.||+.||.|||+   .+++|+||+|+||++++++.+||+|||++.........
T Consensus        81 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~  156 (288)
T cd07833          81 YVERTLLELLE-ASPGGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPAS  156 (288)
T ss_pred             cCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccc
Confidence            99987776554 344568999999999999999999998   89999999999999999999999999999876544332


Q ss_pred             ceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHH--------HHh-cCCccc
Q 042831          510 QTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVW--------DLY-GNGKLL  579 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~--------~~~-~~~~l~  579 (645)
                      ......++..|+|||++.+. .++.++||||||+++|||++|+.||......+........+        ... .+....
T Consensus       157 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T cd07833         157 PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFA  236 (288)
T ss_pred             cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccc
Confidence            33445678899999999888 78999999999999999999999997543221111100000        000 000000


Q ss_pred             -----cccCcc-ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          580 -----EAVDPR-LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       580 -----~~~d~~-l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                           +..++. +...++......+.+++.+||+.+|++||++++++++.++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         237 GVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             ccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence                 000000 0000111124678899999999999999999999988654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.7e-36  Score=305.16  Aligned_cols=247  Identities=30%  Similarity=0.459  Sum_probs=200.3

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCCh
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL  436 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL  436 (645)
                      ++||+|++|.||++.+.. ++.|++|.+..... .....+.+|++++++++|+||+++++++...+..++||||+++++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l   79 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL   79 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence            479999999999999987 89999999876533 3567899999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce-eecc
Q 042831          437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT-TVLA  515 (645)
Q Consensus       437 ~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~-~~~~  515 (645)
                      .+++......+++..+..++.+++.+|.|||+   ++++||||||+||+++.++.+||+|||+++.......... ....
T Consensus        80 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  156 (251)
T cd05041          80 LTFLRKKKNRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ  156 (251)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence            99997666678999999999999999999998   8999999999999999999999999999975542211111 1122


Q ss_pred             cCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHH
Q 042831          516 GTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQ  594 (645)
Q Consensus       516 gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~  594 (645)
                      .+..|+|||.+.++.++.++|+|||||+++||++ |..||.......   ....    ...+.         ....+...
T Consensus       157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~---~~~~----~~~~~---------~~~~~~~~  220 (251)
T cd05041         157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ---TRER----IESGY---------RMPAPQLC  220 (251)
T ss_pred             ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH---HHHH----HhcCC---------CCCCCccC
Confidence            3567999999988889999999999999999999 888886543221   1111    11110         00111122


Q ss_pred             HHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          595 IERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       595 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ...+.+++.+|++.+|++||++.|+++.|+
T Consensus       221 ~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         221 PEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            346788899999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=1.1e-36  Score=318.11  Aligned_cols=256  Identities=26%  Similarity=0.424  Sum_probs=203.0

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcC-------CCeEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeC
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRE-------TNSYIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEK  421 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~-------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~  421 (645)
                      .++|...+.||+|+||.||++...+       ....+|+|.+... ......++..|++++.++ +|+||++++++|...
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            3578889999999999999998643       2356999998754 334556788999999999 799999999999999


Q ss_pred             CeEEEEEEecCCCChhhhhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE
Q 042831          422 KELLLVYEFMPNGSLDSHLFKEN---------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML  486 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl  486 (645)
                      +..++||||+++|+|.+++....               ..+++.+++.++.|++.||+|||+   .+++||||||+||++
T Consensus        97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill  173 (307)
T cd05098          97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLV  173 (307)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEE
Confidence            99999999999999999996532               358999999999999999999998   899999999999999


Q ss_pred             CCCCcEEEeeccCcccccccCCcc-eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchh
Q 042831          487 DSNFNAKIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVS  564 (645)
Q Consensus       487 d~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~  564 (645)
                      +.++.+||+|||+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |+.||......   .
T Consensus       174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~---~  250 (307)
T cd05098         174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---E  250 (307)
T ss_pred             cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH---H
Confidence            999999999999987654322111 112234568999999988889999999999999999998 88888643221   1


Q ss_pred             HHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          565 LLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       565 l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                          +......+...         ..+......+.+++..|++.+|++||+|.++++.|+.
T Consensus       251 ----~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~  298 (307)
T cd05098         251 ----LFKLLKEGHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  298 (307)
T ss_pred             ----HHHHHHcCCCC---------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence                11111122111         1111223466778899999999999999999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=2.1e-36  Score=313.40  Aligned_cols=265  Identities=25%  Similarity=0.323  Sum_probs=209.9

Q ss_pred             cChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeee
Q 042831          342 FPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHE  420 (645)
Q Consensus       342 ~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~  420 (645)
                      +...++..++++|...+.||+|+||.||++....+++.+|+|.+.... ....++.+|+.++.++ +|||++++++++..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            455677778899999999999999999999999889999999986532 2345677899999999 79999999999875


Q ss_pred             C-----CeEEEEEEecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcE
Q 042831          421 K-----KELLLVYEFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA  492 (645)
Q Consensus       421 ~-----~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~  492 (645)
                      .     +..++|+||+++++|.+++..   ....+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~  167 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGV  167 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCE
Confidence            3     368999999999999998753   34578999999999999999999998   899999999999999999999


Q ss_pred             EEeeccCcccccccCCcceeecccCccccCccccccCC-----CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHH
Q 042831          493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-----ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQ  567 (645)
Q Consensus       493 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~  567 (645)
                      ||+|||+++....... ......++..|+|||.+....     ++.++|||||||++|||++|+.||.......  .+. 
T Consensus       168 kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~--~~~-  243 (291)
T cd06639         168 KLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK--TLF-  243 (291)
T ss_pred             EEeecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH--HHH-
Confidence            9999999876543221 122346788999999876543     6889999999999999999999997543211  111 


Q ss_pred             HHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          568 WVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       568 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                         ... ++......+       ..+....+..++.+|++.+|++||++.|++++.++
T Consensus       244 ---~~~-~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~  290 (291)
T cd06639         244 ---KIP-RNPPPTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFI  290 (291)
T ss_pred             ---HHh-cCCCCCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcCccc
Confidence               111 111111111       11223467889999999999999999999998765

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=1.8e-36  Score=310.18  Aligned_cols=255  Identities=27%  Similarity=0.401  Sum_probs=203.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCC---CeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRET---NSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~---~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .++|...++||+|+||.||+|.+.+.   ...|++|...... .+..+.+.+|+.++++++|||+++++++|.+ +..++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l   83 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI   83 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence            34577889999999999999987643   3579999887654 4556789999999999999999999999875 45789


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++|+|.+++......+++..++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++.....
T Consensus        84 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  160 (270)
T cd05056          84 VMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE  160 (270)
T ss_pred             EEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence            999999999999997666678999999999999999999998   89999999999999999999999999999865443


Q ss_pred             CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      .........++..|+|||.+....++.++||||||++++|+++ |+.||......   ....+.    .++...     .
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---~~~~~~----~~~~~~-----~  228 (270)
T cd05056         161 SYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN---DVIGRI----ENGERL-----P  228 (270)
T ss_pred             cceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHH----HcCCcC-----C
Confidence            2222222334568999999988889999999999999999986 99999754322   111111    112111     1


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....    ....+.+++.+|+.++|++|||+.++++.|+.
T Consensus       229 ~~~~----~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~  264 (270)
T cd05056         229 MPPN----CPPTLYSLMTKCWAYDPSKRPRFTELKAQLSD  264 (270)
T ss_pred             CCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            1111    22457778899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=2.5e-36  Score=306.62  Aligned_cols=248  Identities=29%  Similarity=0.424  Sum_probs=200.9

Q ss_pred             CccCcCCcEEEEEEEEcC-CC--eEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRE-TN--SYIAVKRVSQGSK-QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~-~~--~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      ++||+|++|.||+|.+.. .+  ..||+|.++.... ...+.+.+|+.++++++|+||+++++.+.. ...++|+||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            468999999999999865 23  3699999987655 667889999999999999999999999988 889999999999


Q ss_pred             CChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc--c
Q 042831          434 GSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS--Q  510 (645)
Q Consensus       434 gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~--~  510 (645)
                      ++|.+++.+.. ..+++...+.++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||+++........  .
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  156 (257)
T cd05040          80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM  156 (257)
T ss_pred             CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence            99999997654 578999999999999999999998   89999999999999999999999999999876442221  1


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      .....++..|+|||++....++.++|||||||++|||++ |+.||......   .......   ..+...         .
T Consensus       157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~~~---~~~~~~---------~  221 (257)
T cd05040         157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS---QILKKID---KEGERL---------E  221 (257)
T ss_pred             ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHH---hcCCcC---------C
Confidence            122456788999999998899999999999999999998 99999643321   1111111   111100         0


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .+......+.+++.+|++.+|++||++.++++.|.
T Consensus       222 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         222 RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            01112346778899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=1e-36  Score=314.27  Aligned_cols=266  Identities=24%  Similarity=0.316  Sum_probs=203.2

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +|+..+.||+|+||.||+|++..+|+.+|+|++....  ......+.+|++++++++|+|++++++++.+.+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            4677889999999999999999999999999986532  22345678899999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      ++ ++|.+++......+++.....++.||++||.|||+   .+++||||||+||+++.++.+||+|||+++....... .
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-~  155 (284)
T cd07839          81 CD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR-C  155 (284)
T ss_pred             CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC-C
Confidence            96 57888876666679999999999999999999998   8999999999999999999999999999976543221 2


Q ss_pred             eeecccCccccCccccccCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCc------cccccC
Q 042831          511 TTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK------LLEAVD  583 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~-~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~------l~~~~d  583 (645)
                      .....++..|+|||++.+.. ++.++|||||||++|||++|+.|+......  ...............      +.+..+
T Consensus       156 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
T cd07839         156 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV--DDQLKRIFRLLGTPTEESWPGVSKLPD  233 (284)
T ss_pred             cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH--HHHHHHHHHHhCCCChHHhHHhhhccc
Confidence            22345788999999887654 789999999999999999999886543321  111111111111000      000000


Q ss_pred             ----ccccCC-----CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          584 ----PRLCRD-----FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       584 ----~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                          +.....     ........+.+++.+||+.||++|||++|++++.|+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         234 YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             ccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence                000000     011123567788999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=4.9e-37  Score=323.69  Aligned_cols=246  Identities=25%  Similarity=0.343  Sum_probs=193.8

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHH-HHHhcCCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVK-IISRLRHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~-~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.||+|+||.||++++..+++.||+|++....   .....++..|.. +++.++|+||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            46999999999999999999999999986432   223344555544 56778999999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |+|.+++... ..+++.....++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++..... ......
T Consensus        81 ~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~-~~~~~~  155 (325)
T cd05602          81 GELFYHLQRE-RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-NGTTST  155 (325)
T ss_pred             CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccC-CCCccc
Confidence            9999988653 457788888999999999999998   89999999999999999999999999998753221 122344


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||......   ...+.+   . ....      .+....   
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~i---~-~~~~------~~~~~~---  219 (325)
T cd05602         156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA---EMYDNI---L-NKPL------QLKPNI---  219 (325)
T ss_pred             ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH---HHHHHH---H-hCCc------CCCCCC---
Confidence            57999999999999999999999999999999999999999754321   111111   1 1111      111112   


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHH----HHHHHhcc
Q 042831          594 QIERLMIVGLWCAHPDENLRPSIR----QVIHVLNF  625 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RPs~~----evl~~L~~  625 (645)
                       ...+.+++.+|++.||.+||++.    +++++.++
T Consensus       220 -~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~  254 (325)
T cd05602         220 -TNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFF  254 (325)
T ss_pred             -CHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCccc
Confidence             23566788899999999999876    66666654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=4.8e-37  Score=316.90  Aligned_cols=269  Identities=25%  Similarity=0.331  Sum_probs=204.2

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ++|+..++||+|+||.||+|.+..+++.||+|++....  ....+.+.+|++++++++|||++++++++..++..++|+|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            46788899999999999999998889999999876432  2245678899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+++++|..+... ...+++.++..++.||++||.|||+   .+++|+||+|+||++++++.+||+|||++....... .
T Consensus        81 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-~  155 (286)
T cd07846          81 FVDHTVLDDLEKY-PNGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-E  155 (286)
T ss_pred             cCCccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-c
Confidence            9999998876643 3458999999999999999999998   899999999999999999999999999987654332 2


Q ss_pred             ceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchh-HHHHH-------HHHhcCCcc-c
Q 042831          510 QTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVS-LLQWV-------WDLYGNGKL-L  579 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~-l~~~~-------~~~~~~~~l-~  579 (645)
                      ......++..|+|||++.+ ..++.++||||||++++||++|+.||......+... +..+.       ........+ .
T Consensus       156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T cd07846         156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFA  235 (286)
T ss_pred             ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhh
Confidence            2233457889999998865 447889999999999999999999997443211100 00000       000000000 0


Q ss_pred             cccCccccCCC-----CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          580 EAVDPRLCRDF-----DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       580 ~~~d~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....+......     .......+.+++.+||+.+|++||++.+++++.++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         236 GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            00001000000     01123567889999999999999999999998664

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=1.8e-36  Score=316.07  Aligned_cols=257  Identities=26%  Similarity=0.429  Sum_probs=204.3

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEc-------CCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeee
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFR-------ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHE  420 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~-------~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~  420 (645)
                      ..++|...+.||+|+||.||+++..       ..+..||+|.+... .....+++.+|+.++..+ +||||+++++++..
T Consensus        13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   92 (304)
T cd05101          13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   92 (304)
T ss_pred             cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence            3567888899999999999999753       23457999988654 344567899999999999 89999999999999


Q ss_pred             CCeEEEEEEecCCCChhhhhhhc---------------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeE
Q 042831          421 KKELLLVYEFMPNGSLDSHLFKE---------------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM  485 (645)
Q Consensus       421 ~~~~~lV~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NIL  485 (645)
                      .+..++||||+++|+|.+++.+.               ...+++..+..++.||++||.|||+   .+++||||||+||+
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nil  169 (304)
T cd05101          93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVL  169 (304)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEE
Confidence            99999999999999999998653               2357889999999999999999998   89999999999999


Q ss_pred             ECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCch
Q 042831          486 LDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQV  563 (645)
Q Consensus       486 ld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~  563 (645)
                      +++++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||......   
T Consensus       170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---  246 (304)
T cd05101         170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---  246 (304)
T ss_pred             EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH---
Confidence            999999999999999866432222 1222345678999999988889999999999999999998 78888643211   


Q ss_pred             hHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          564 SLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       564 ~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                         + ..+...++....         ........+..++.+||+++|++||++.|+++.|..
T Consensus       247 ---~-~~~~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~  295 (304)
T cd05101         247 ---E-LFKLLKEGHRMD---------KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDR  295 (304)
T ss_pred             ---H-HHHHHHcCCcCC---------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence               1 122222221110         011223467778899999999999999999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=2.4e-36  Score=309.58  Aligned_cols=257  Identities=25%  Similarity=0.426  Sum_probs=203.6

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh----------hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK----------QGIKEYASEVKIISRLRHRNLVQLLGWCHEKK  422 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~----------~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~  422 (645)
                      +|...+.||+|+||.||+|....+++.+|+|.++....          ...+.+.+|+.++.+++|+|++++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            46678899999999999999988899999998753211          12346788999999999999999999999999


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      ..++||||+++++|.+++.+. ..+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||+++.
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~  157 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGISKK  157 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeecccccc
Confidence            999999999999999998654 578999999999999999999998   8999999999999999999999999999976


Q ss_pred             ccccCC-cceeecccCccccCccccccCC--CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccc
Q 042831          503 VEHAKG-SQTTVLAGTMGYMAPECATTGK--ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL  579 (645)
Q Consensus       503 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~--~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~  579 (645)
                      ...... .......++..|+|||.+....  ++.++|+||||++++|+++|+.||.....      .....+.... ...
T Consensus       158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~-~~~  230 (272)
T cd06629         158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA------IAAMFKLGNK-RSA  230 (272)
T ss_pred             ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch------HHHHHHhhcc-ccC
Confidence            532211 1123346788999999987654  78999999999999999999999963321      1111221111 111


Q ss_pred             cccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       580 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ..+++.....    ....+.+++..|++++|++||++++|+++.+
T Consensus       231 ~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~il~~~~  271 (272)
T cd06629         231 PPIPPDVSMN----LSPVALDFLNACFTINPDNRPTARELLQHPF  271 (272)
T ss_pred             CcCCcccccc----CCHHHHHHHHHHhcCChhhCCCHHHHhhCCC
Confidence            1122222222    2356777889999999999999999999865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=2e-36  Score=307.08  Aligned_cols=252  Identities=22%  Similarity=0.344  Sum_probs=206.7

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +|+..+.||+|+||.+|++....+++.||+|++...  .....+++.+|+.++++++|+|++++++++...+..++|+||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            477889999999999999999988999999998643  334556889999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      +++++|.+++... ...+++.++..++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++....... .
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-~  156 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-E  156 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch-h
Confidence            9999999988654 3468999999999999999999998   899999999999999999999999999997654322 1


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      ......|+..|+|||++.+...+.++|+|||||+++||++|+.||......      +.+.... .+..     +..   
T Consensus       157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~~-~~~~-----~~~---  221 (256)
T cd08218         157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK------NLVLKII-RGSY-----PPV---  221 (256)
T ss_pred             hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH------HHHHHHh-cCCC-----CCC---
Confidence            222345788999999998888999999999999999999999999743321      1111111 1111     111   


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                       .......+.+++.+|++.+|++||+|++|+++.+
T Consensus       222 -~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~  255 (256)
T cd08218         222 -SSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNF  255 (256)
T ss_pred             -cccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcC
Confidence             1122345778889999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=5.8e-36  Score=311.04  Aligned_cols=262  Identities=25%  Similarity=0.415  Sum_probs=202.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcC----------------CCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRE----------------TNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQ  413 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~----------------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~  413 (645)
                      .++|+..++||+|+||.||++...+                ++..+|+|.+... ......++.+|++++.+++|+|+++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            3568889999999999999986432                3457999998754 3445678999999999999999999


Q ss_pred             EEeeeeeCCeEEEEEEecCCCChhhhhhhcC----------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCC
Q 042831          414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKEN----------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSN  483 (645)
Q Consensus       414 l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~N  483 (645)
                      +++++...+..++||||+++++|.+++....          ..+++.+...++.|++.||.|||+   .+++|+||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~N  160 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhe
Confidence            9999999999999999999999999886432          347888999999999999999998   899999999999


Q ss_pred             eEECCCCcEEEeeccCcccccccCCcc-eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc--CCCCCCCCCCC
Q 042831          484 IMLDSNFNAKIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC--GRKPINPKAPQ  560 (645)
Q Consensus       484 ILld~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt--G~~pf~~~~~~  560 (645)
                      ||+++++.++|+|||+++.+....... .....++..|++||....+.++.++|||||||++|||++  |..||......
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~  240 (296)
T cd05095         161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE  240 (296)
T ss_pred             EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence            999999999999999997653322111 112234678999999888889999999999999999998  77888644322


Q ss_pred             CchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          561 GQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       561 ~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                         .........+......... +.     +......+.+++.+||+.||++||++.++++.|.
T Consensus       241 ---~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         241 ---QVIENTGEFFRDQGRQVYL-PK-----PALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             ---HHHHHHHHHHhhccccccC-CC-----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence               1122121211111111110 11     1112256778999999999999999999999885

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-36  Score=315.05  Aligned_cols=267  Identities=23%  Similarity=0.295  Sum_probs=203.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|+..+.||+|++|.||+|....+++.||+|.+..... .....+.+|++++++++|+||+++++++..++..++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            578889999999999999999988899999999865432 2234567899999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      ++ ++|.+++......+++.....++.|+++||.|||+   .+++||||||+||+++.++.+||+|||+++....... .
T Consensus        85 ~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-~  159 (291)
T cd07844          85 LD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK-T  159 (291)
T ss_pred             CC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCCCc-c
Confidence            97 48999887666678999999999999999999998   8999999999999999999999999999875432111 1


Q ss_pred             eeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC---cccc------
Q 042831          511 TTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG---KLLE------  580 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~---~l~~------  580 (645)
                      .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||......  .......++..+..   ....      
T Consensus       160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (291)
T cd07844         160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV--EDQLHKIFRVLGTPTEETWPGVSSNPE  237 (291)
T ss_pred             ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH--HHHHHHHHHhcCCCChhhhhhhhhccc
Confidence            122346788999998865 45889999999999999999999999654321  11111122111110   0000      


Q ss_pred             -------cc-CccccCCC-CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          581 -------AV-DPRLCRDF-DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       581 -------~~-d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                             .. ...+.... .......+.+++.+||+++|++|||+.|++++.++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                   00 00000000 00112566788899999999999999999988764

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-36  Score=312.83  Aligned_cols=265  Identities=25%  Similarity=0.325  Sum_probs=206.4

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC--CeEEEEEE
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KELLLVYE  429 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~--~~~~lV~E  429 (645)
                      |...++||+|++|.||+|+...+++.+|+|++....  ....+.+.+|++++.+++|+|++++++++...  +..++|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            556788999999999999999889999999997653  34456788999999999999999999999887  89999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |++ ++|.+++......+++..++.++.||++||.|||+   .+++|+||+|+||++++++.+||+|||++.........
T Consensus        81 ~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~  156 (287)
T cd07840          81 YMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA  156 (287)
T ss_pred             ccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc
Confidence            997 48888886665689999999999999999999998   89999999999999999999999999999876544322


Q ss_pred             ceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC---cc-------
Q 042831          510 QTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG---KL-------  578 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~---~l-------  578 (645)
                      ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......   ....+.+.....   ..       
T Consensus       157 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T cd07840         157 DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE---QLEKIFELCGSPTDENWPGVSKLP  233 (287)
T ss_pred             cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCchhhccccccch
Confidence            2333456788999997765 457899999999999999999999997554321   111111111100   00       


Q ss_pred             -------ccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          579 -------LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       579 -------~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                             .......+...+...+...+.+++..|++.+|++||++++++++.++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence                   00000000001111124678889999999999999999999988763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=2.2e-36  Score=307.05  Aligned_cols=239  Identities=28%  Similarity=0.485  Sum_probs=193.3

Q ss_pred             CccCcCCcEEEEEEEEcCCC----------eEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          358 QKLGQGGFGGVYKGFFRETN----------SYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~----------~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      +.||+|+||.||+|.+..++          ..+++|.+...... ...+.+|+.++++++|||+++++++|.. ...++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            46999999999999998766          45888877654433 6788999999999999999999999988 778999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC-------cEEEeeccCc
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF-------NAKIGDFGLA  500 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~-------~~kl~DfGla  500 (645)
                      |||+++|+|.+++......+++..+..++.||+.||.|||+   ++++||||||+|||++.++       .+||+|||++
T Consensus        79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a  155 (259)
T cd05037          79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP  155 (259)
T ss_pred             EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence            99999999999997666578999999999999999999998   8999999999999999887       7999999998


Q ss_pred             ccccccCCcceeecccCccccCccccccC--CCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCc
Q 042831          501 RLVEHAKGSQTTVLAGTMGYMAPECATTG--KASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGK  577 (645)
Q Consensus       501 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~  577 (645)
                      .....     .....++..|+|||++...  .++.++||||||+++|||++ |..|+........   ..+    +....
T Consensus       156 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~---~~~----~~~~~  223 (259)
T cd05037         156 ITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK---ERF----YQDQH  223 (259)
T ss_pred             ccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH---HHH----HhcCC
Confidence            76433     1223466789999998876  78999999999999999999 5777765432211   111    11110


Q ss_pred             cccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          578 LLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       578 l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .       + ..   .....+.+++.+|++.+|++||++.++++.|+
T Consensus       224 ~-------~-~~---~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         224 R-------L-PM---PDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             C-------C-CC---CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            0       0 00   01157778899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=8.5e-37  Score=315.28  Aligned_cols=261  Identities=27%  Similarity=0.421  Sum_probs=203.9

Q ss_pred             cCCCCCCccCcCCcEEEEEEEE----cCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC--CeE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFF----RETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KEL  424 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~----~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~--~~~  424 (645)
                      ..|...++||+|+||.||++.+    ..++..||+|.++... ......+.+|++++++++|||++++.+++...  ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            3467889999999999999985    3467899999987553 44457899999999999999999999998775  568


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++||||+++++|.+++.+....+++..+..++.|++.||.|||+   ++++||||||+||+++.++.+||+|||+++...
T Consensus        84 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE  160 (284)
T ss_pred             EEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCccccccc
Confidence            99999999999999987665678999999999999999999998   999999999999999999999999999998654


Q ss_pred             ccCCc--ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCC---------CchhHHHHHHHHh
Q 042831          505 HAKGS--QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQ---------GQVSLLQWVWDLY  573 (645)
Q Consensus       505 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~---------~~~~l~~~~~~~~  573 (645)
                      .....  ......++..|+|||++.+..++.++|||||||++|||++++.|.......         .... ........
T Consensus       161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  239 (284)
T cd05079         161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMT-VTRLVRVL  239 (284)
T ss_pred             cCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhccccccccc-HHHHHHHH
Confidence            33221  112345677899999998888999999999999999999988765321100         0000 11111111


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .++....         ........+.+++.+|++.+|++||++.++++.|+.
T Consensus       240 ~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~  282 (284)
T cd05079         240 EEGKRLP---------RPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA  282 (284)
T ss_pred             HcCccCC---------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence            1121110         111234578889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=4.6e-37  Score=328.46  Aligned_cols=265  Identities=23%  Similarity=0.295  Sum_probs=211.4

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-C-----CCccEEEeeeeeCCeEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-H-----RNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H-----~nlv~l~~~~~~~~~~~l  426 (645)
                      +|.+.+.||+|.||.|-+|.+..+++.||||+++.. +....+-..|+.+|.+|+ |     -|+|++++++..++++||
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            788999999999999999999999999999999654 455677788999999997 4     389999999999999999


Q ss_pred             EEEecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC--CCcEEEeeccCcccc
Q 042831          427 VYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS--NFNAKIGDFGLARLV  503 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~--~~~~kl~DfGla~~~  503 (645)
                      |+|.+ .-+|+++++.++ ..++...++.|+.||+.||.+||+   .+|||+||||+||||.+  ...+||+|||.++..
T Consensus       266 VfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~  341 (586)
T KOG0667|consen  266 VFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE  341 (586)
T ss_pred             eehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence            99998 679999998654 568999999999999999999998   99999999999999964  347999999999865


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHH--------HHHHHhcC
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQ--------WVWDLYGN  575 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~--------~~~~~~~~  575 (645)
                      ...-.    ....+..|+|||++.+.+|+.+.||||||||+.||.+|.+.|.+..+.++...+.        |+.+...+
T Consensus       342 ~q~vy----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~  417 (586)
T KOG0667|consen  342 SQRVY----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKK  417 (586)
T ss_pred             CCcce----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence            43322    3456788999999999999999999999999999999998888777655543332        11111100


Q ss_pred             ---------Cccc-------------------------cccCc-c---ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHH
Q 042831          576 ---------GKLL-------------------------EAVDP-R---LCRDFDGQQIERLMIVGLWCAHPDENLRPSIR  617 (645)
Q Consensus       576 ---------~~l~-------------------------~~~d~-~---l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~  617 (645)
                               +...                         +..-| .   +.......+-+.+++++.+|+..||.+|+|..
T Consensus       418 ~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~  497 (586)
T KOG0667|consen  418 AHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPA  497 (586)
T ss_pred             cceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHH
Confidence                     0000                         00001 0   00011112336678999999999999999999


Q ss_pred             HHHHHhccC
Q 042831          618 QVIHVLNFE  626 (645)
Q Consensus       618 evl~~L~~~  626 (645)
                      |+++|.+..
T Consensus       498 qal~Hpfl~  506 (586)
T KOG0667|consen  498 QALNHPFLT  506 (586)
T ss_pred             HHhcCcccc
Confidence            999999965

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.4e-36  Score=322.66  Aligned_cols=263  Identities=21%  Similarity=0.298  Sum_probs=202.0

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC------
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEK------  421 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~------  421 (645)
                      ..++|...+.||+|+||.||+|.+..+++.||||++....  ....+.+.+|+.++++++||||+++++++...      
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            4578889999999999999999999899999999986532  23456678999999999999999999987543      


Q ss_pred             CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          422 KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      ...++++|++ +++|..++.  ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~  166 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVK--CQKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLAR  166 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCccce
Confidence            4579999988 788887763  3468999999999999999999998   899999999999999999999999999997


Q ss_pred             cccccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC----
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG----  576 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~----  576 (645)
                      ....    ......|+..|+|||++.+ ..++.++|||||||++|||++|+.||......+   ............    
T Consensus       167 ~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~  239 (343)
T cd07878         167 QADD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID---QLKRIMEVVGTPSPEV  239 (343)
T ss_pred             ecCC----CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH---HHHHHHHHhCCCCHHH
Confidence            6532    2233568999999999876 568999999999999999999999997543211   111111110000    


Q ss_pred             -------ccccccCccccCCCCH--------HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          577 -------KLLEAVDPRLCRDFDG--------QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       577 -------~l~~~~d~~l~~~~~~--------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                             .....+. .+ .....        .....+.+++.+|++.||++|||+.|+++|.++..
T Consensus       240 ~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~  303 (343)
T cd07878         240 LKKISSEHARKYIQ-SL-PHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ  303 (343)
T ss_pred             HHhcchhhHHHHhh-cc-ccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence                   0000000 00 00000        01134678899999999999999999999998753

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=2.4e-36  Score=311.30  Aligned_cols=263  Identities=26%  Similarity=0.385  Sum_probs=208.7

Q ss_pred             cChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeee
Q 042831          342 FPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHE  420 (645)
Q Consensus       342 ~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~  420 (645)
                      .++.++..+.+.|+..+.||+|+||.||+|.+..+++.+|+|.+.... ....++..|+.++.++ +|+|++++++++..
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   84 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK   84 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence            466677777889999999999999999999999889999999986543 3346788899999998 69999999999853


Q ss_pred             ------CCeEEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEE
Q 042831          421 ------KKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK  493 (645)
Q Consensus       421 ------~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~k  493 (645)
                            ....+++|||+++|+|.+++... ...+++..+..++.||++||.|||+   .+++|+||||+||++++++.++
T Consensus        85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~~  161 (282)
T cd06636          85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVK  161 (282)
T ss_pred             ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEE
Confidence                  45789999999999999988653 3568899999999999999999998   8999999999999999999999


Q ss_pred             EeeccCcccccccCCcceeecccCccccCccccc-----cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHH
Q 042831          494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT-----TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQW  568 (645)
Q Consensus       494 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~  568 (645)
                      |+|||++........ ......|+..|+|||.+.     ...++.++|||||||++|||++|+.||....+.....    
T Consensus       162 l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~----  236 (282)
T cd06636         162 LVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF----  236 (282)
T ss_pred             EeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh----
Confidence            999999875532221 223356889999999875     3457889999999999999999999996543211110    


Q ss_pred             HHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          569 VWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       569 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        ..      .....+.+..   ......+.+++.+||+.||.+||++.|++++.+
T Consensus       237 --~~------~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~  281 (282)
T cd06636         237 --LI------PRNPPPKLKS---KKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPF  281 (282)
T ss_pred             --hH------hhCCCCCCcc---cccCHHHHHHHHHHhCCChhhCcCHHHHhcCCC
Confidence              00      0001111111   112346778889999999999999999998865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=5.3e-36  Score=305.95  Aligned_cols=257  Identities=26%  Similarity=0.439  Sum_probs=206.5

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC------hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS------KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~------~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      +|+..+.||+|++|.||+|....+++.+|+|.+....      ....+.+.+|++++++++|+|++++++++.+.+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            4777899999999999999998889999999886432      2245788999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC-cEEEeeccCcccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF-NAKIGDFGLARLVEH  505 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~-~~kl~DfGla~~~~~  505 (645)
                      |+||+++++|.+++.+ ...+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++ .+||+|||++.....
T Consensus        81 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~  156 (268)
T cd06630          81 FVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA  156 (268)
T ss_pred             EEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence            9999999999998864 3468899999999999999999998   8999999999999998776 599999999876543


Q ss_pred             cCC---cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          506 AKG---SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       506 ~~~---~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      ...   .......++..|+|||.+.+..++.++||||+|++++||++|+.||..........   ........       
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~---~~~~~~~~-------  226 (268)
T cd06630         157 KGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA---LIFKIASA-------  226 (268)
T ss_pred             ccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH---HHHHHhcc-------
Confidence            211   11223467889999999988889999999999999999999999997543322111   11111100       


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                        ......+......+.+++.+|++.+|++||++.+++.+.++
T Consensus       227 --~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~  267 (268)
T cd06630         227 --TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVF  267 (268)
T ss_pred             --CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCccc
Confidence              00112222334567788899999999999999999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=1.2e-36  Score=315.65  Aligned_cols=254  Identities=25%  Similarity=0.336  Sum_probs=205.8

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      |.....||+|+||.||++....++..||||.+........+.+.+|+.++.+++|+|++++++.+...+..++||||+++
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~  103 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG  103 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence            33356799999999999999888999999998766656667889999999999999999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      ++|.+++..  ..+++..+..++.||+.||.|||+   .+++||||||+||++++++.+||+|||++....... .....
T Consensus       104 ~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~~  177 (292)
T cd06658         104 GALTDIVTH--TRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV-PKRKS  177 (292)
T ss_pred             CcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc-ccCce
Confidence            999998743  358999999999999999999998   899999999999999999999999999987543222 12233


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..++..|+|||.+.+..++.++||||||+++|||++|+.||.......   ...   . ..     ..+.+.+...  ..
T Consensus       178 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~---~~~---~-~~-----~~~~~~~~~~--~~  243 (292)
T cd06658         178 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ---AMR---R-IR-----DNLPPRVKDS--HK  243 (292)
T ss_pred             eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHH---H-HH-----hcCCCccccc--cc
Confidence            568899999999988889999999999999999999999997533211   111   0 10     1111111111  01


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          594 QIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ....+..++..|++.||++|||++|++++.++..
T Consensus       244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~  277 (292)
T cd06658         244 VSSVLRGFLDLMLVREPSQRATAQELLQHPFLKL  277 (292)
T ss_pred             cCHHHHHHHHHHccCChhHCcCHHHHhhChhhhc
Confidence            2235667788999999999999999999988873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=2.9e-36  Score=305.47  Aligned_cols=251  Identities=31%  Similarity=0.507  Sum_probs=203.6

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCC----eEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETN----SYIAVKRVSQGSKQ-GIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~----~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      |+..+.||+|+||.||++.+...+    ..||+|.+...... ..+.+..|+.++.+++|+|++++++++.+.+..+++|
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence            356788999999999999998765    88999999765433 6778999999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCC-CCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          429 EFMPNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      ||+++++|.+++...... +++.++..++.|++.||+|||+   .+++|+||||+||++++++.++|+|||+++......
T Consensus        81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  157 (258)
T smart00219       81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD  157 (258)
T ss_pred             eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence            999999999999765444 8999999999999999999998   899999999999999999999999999998665432


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                      ........++..|+|||.+.+..++.++||||+|++++||++ |+.||.....   ..+.+.    ...+....     .
T Consensus       158 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~---~~~~~~----~~~~~~~~-----~  225 (258)
T smart00219      158 YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN---EEVLEY----LKKGYRLP-----K  225 (258)
T ss_pred             ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHH----HhcCCCCC-----C
Confidence            222212336789999999988889999999999999999998 8888865322   112221    11221111     0


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHh
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL  623 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  623 (645)
                      ..    .....+.+++.+|++.+|++|||+.|+++.|
T Consensus       226 ~~----~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      226 PE----NCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             CC----cCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            11    1234577788999999999999999999865

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=3.9e-36  Score=306.04  Aligned_cols=249  Identities=27%  Similarity=0.422  Sum_probs=194.4

Q ss_pred             CccCcCCcEEEEEEEEcC---CCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeee-eCCeEEEEEEecC
Q 042831          358 QKLGQGGFGGVYKGFFRE---TNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCH-EKKELLLVYEFMP  432 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~---~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~-~~~~~~lV~Ey~~  432 (645)
                      +.||+|+||.||+|.+.+   .+..||+|++... .....+.+.+|+.+++.++|||+++++++|. .++..++|+||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            468999999999998753   3467999998543 3445678889999999999999999999876 4556899999999


Q ss_pred             CCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC---c
Q 042831          433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG---S  509 (645)
Q Consensus       433 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~---~  509 (645)
                      +|+|.+++.+....+++..+..++.|+++||.|||+   .+++||||||+|||+++++.+||+|||+++.......   .
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  157 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH  157 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence            999999997666667888889999999999999998   8999999999999999999999999999875432111   1


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcC-CCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG-RKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG-~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ......++..|+|||.+....++.++|||||||++|||++| ..||.....   ..+...+.    .+..     +....
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~----~~~~-----~~~~~  225 (262)
T cd05058         158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS---FDITVYLL----QGRR-----LLQPE  225 (262)
T ss_pred             ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHh----cCCC-----CCCCC
Confidence            11223456789999999888999999999999999999995 556653321   12222211    1110     11011


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .    ....+.+++..||+++|++||++.++++.|+.
T Consensus       226 ~----~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~  258 (262)
T cd05058         226 Y----CPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQ  258 (262)
T ss_pred             c----CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence            1    12457788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=6.3e-36  Score=313.59  Aligned_cols=263  Identities=19%  Similarity=0.290  Sum_probs=190.9

Q ss_pred             CCccCcCCcEEEEEEEEcC--CCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeee--eCCeEEEEEEecC
Q 042831          357 DQKLGQGGFGGVYKGFFRE--TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCH--EKKELLLVYEFMP  432 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~--~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~--~~~~~~lV~Ey~~  432 (645)
                      ..+||+|+||.||+|+..+  ++..||+|.+....  ....+.+|++++++++||||+++++++.  .+...++|+||++
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            4689999999999999764  56789999886543  2346778999999999999999999885  3567899999986


Q ss_pred             CCChhhhhhh--------cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE----CCCCcEEEeeccCc
Q 042831          433 NGSLDSHLFK--------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML----DSNFNAKIGDFGLA  500 (645)
Q Consensus       433 ~gsL~~~l~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl----d~~~~~kl~DfGla  500 (645)
                      + +|.+++..        ....+++..+..++.||+.||.|||+   .+|+||||||+|||+    +.++.+||+|||++
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07867          84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence            4 67666532        12358899999999999999999998   899999999999999    56778999999999


Q ss_pred             ccccccCC--cceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc------hhHHHHHHH
Q 042831          501 RLVEHAKG--SQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQ------VSLLQWVWD  571 (645)
Q Consensus       501 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~------~~l~~~~~~  571 (645)
                      +.......  .......+|..|+|||++.+. .++.++|||||||++|||++|+.||........      .........
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~  239 (317)
T cd07867         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFS  239 (317)
T ss_pred             eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHH
Confidence            86643322  122345689999999998764 589999999999999999999999975432211      011111111


Q ss_pred             HhcCCc---------------cccccC------cccc---CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          572 LYGNGK---------------LLEAVD------PRLC---RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       572 ~~~~~~---------------l~~~~d------~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..+...               +.....      +.+.   ..........+.+++.+|++.||++|||++|++++.++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         240 VMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            110000               000000      0000   00000112346778999999999999999999998764

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=2.4e-36  Score=320.83  Aligned_cols=257  Identities=28%  Similarity=0.402  Sum_probs=199.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEc-----CCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeC-C
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGS-KQGIKEYASEVKIISRL-RHRNLVQLLGWCHEK-K  422 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~-~  422 (645)
                      .++|...+.||+|+||.||+|.+.     .+++.||||+++... ......+.+|+.++.++ +|+||++++++|... .
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            457888999999999999999853     457889999997543 33456788999999999 689999999988654 5


Q ss_pred             eEEEEEEecCCCChhhhhhhcC----------------------------------------------------------
Q 042831          423 ELLLVYEFMPNGSLDSHLFKEN----------------------------------------------------------  444 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~----------------------------------------------------------  444 (645)
                      ..++||||+++|+|.+++....                                                          
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence            6799999999999999885421                                                          


Q ss_pred             --------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC-cceeecc
Q 042831          445 --------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-SQTTVLA  515 (645)
Q Consensus       445 --------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~-~~~~~~~  515 (645)
                              ..+++..+..++.|+++||+|||+   .+|+||||||+|||+++++.+||+|||+++....... .......
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  242 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR  242 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence                    246888899999999999999998   8999999999999999999999999999876432211 1111233


Q ss_pred             cCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHH
Q 042831          516 GTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQ  594 (645)
Q Consensus       516 gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~  594 (645)
                      ++..|+|||.+.+..++.++||||||+++|||++ |..||.......  .+    .....++.....  +.   ..    
T Consensus       243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~----~~~~~~~~~~~~--~~---~~----  307 (343)
T cd05103         243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EF----CRRLKEGTRMRA--PD---YT----  307 (343)
T ss_pred             CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH--HH----HHHHhccCCCCC--CC---CC----
Confidence            5677999999988889999999999999999997 999986533211  11    111122211110  11   11    


Q ss_pred             HHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          595 IERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       595 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ...+.+++..||++||++||++.|++++|..
T Consensus       308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~  338 (343)
T cd05103         308 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  338 (343)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            1356788899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=2.8e-36  Score=306.67  Aligned_cols=254  Identities=27%  Similarity=0.419  Sum_probs=206.4

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee--CCeEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVY  428 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~--~~~~~lV~  428 (645)
                      +|+..+.||+|+||.||++.+..+++.+|+|.+...  .....+++.+|++++++++|+|++++++++..  +...+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            477789999999999999999989999999998643  34456678899999999999999999998754  45689999


Q ss_pred             EecCCCChhhhhhhc---CCCCCHHHHHHHHHHHHHHHHHHHhhc--CCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          429 EFMPNGSLDSHLFKE---NSLLTWEFRYKIAQDLASGLLYLQEEW--EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      ||+++++|.+++...   ...+++..++.++.||+.||.|||..+  ..+++|+||+|+||+++.++.+||+|||++...
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            999999999998653   467999999999999999999999322  389999999999999999999999999999876


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ..... ......++..|+|||.+....++.++|+||||+++++|++|+.||.....   ..+.+    ....+..     
T Consensus       161 ~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~----~~~~~~~-----  227 (265)
T cd08217         161 GHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ---LQLAS----KIKEGKF-----  227 (265)
T ss_pred             cCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH---HHHHH----HHhcCCC-----
Confidence            54322 12334688999999999988899999999999999999999999975431   11111    1112211     


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHh
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL  623 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  623 (645)
                      +    ..+......+.+++.+|++.+|++||++++|+++.
T Consensus       228 ~----~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~  263 (265)
T cd08217         228 R----RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLP  263 (265)
T ss_pred             C----CCccccCHHHHHHHHHHccCCcccCCCHHHHhhCC
Confidence            1    11223345678899999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=4.8e-36  Score=305.70  Aligned_cols=259  Identities=26%  Similarity=0.389  Sum_probs=209.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|+..+.||.|+||.||+|....++..+++|++.... ....+.+.+|++++++++|+|++++++.+..++..++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            46888999999999999999998889999999986542 33567899999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          431 MPNGSLDSHLFKE--NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       431 ~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      +++++|.+++...  ...+++.....++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++........
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~  157 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD  157 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence            9999999998653  2578999999999999999999998   9999999999999999999999999999876654322


Q ss_pred             c---ceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          509 S---QTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       509 ~---~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      .   ......++..|+|||++... ..+.++|+|||||+++||++|+.||.......  ...    +....      ..+
T Consensus       158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~--~~~----~~~~~------~~~  225 (267)
T cd06610         158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK--VLM----LTLQN------DPP  225 (267)
T ss_pred             ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh--hHH----HHhcC------CCC
Confidence            2   12334688899999998877 78999999999999999999999997543321  111    11111      011


Q ss_pred             cccCCCC-HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          585 RLCRDFD-GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       585 ~l~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .+..... ......+.+++..|++.||++||++++++++.++
T Consensus       226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         226 SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            1111110 1223567788899999999999999999998653

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=4.6e-36  Score=310.83  Aligned_cols=269  Identities=22%  Similarity=0.287  Sum_probs=204.2

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++++|...+.||+|+||.||+|....+++.||+|++..... .....+.+|+.++.+++|+|++++.+++..++..++|+
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            45789999999999999999999998899999999865432 23346788999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+. ++|.+++......+++..+..++.|+++||.|||+   .+++|+||||+||+++.++++||+|||+++...... 
T Consensus        83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-  157 (291)
T cd07870          83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS-  157 (291)
T ss_pred             eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccCCCC-
Confidence            9995 77777776555668889999999999999999998   899999999999999999999999999987543221 


Q ss_pred             cceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC---------cc
Q 042831          509 SQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG---------KL  578 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~---------~l  578 (645)
                      .......++..|+|||.+.+. .++.++|||||||++|||++|+.||+.....  .......+......         .+
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  235 (291)
T cd07870         158 QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV--FEQLEKIWTVLGVPTEDTWPGVSKL  235 (291)
T ss_pred             CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH--HHHHHHHHHHcCCCChhhhhhhhhc
Confidence            112233568899999998764 4788999999999999999999999754321  11111122211100         00


Q ss_pred             ccccCccc----cCCC-----CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          579 LEAVDPRL----CRDF-----DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       579 ~~~~d~~l----~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....+...    ....     .......+.+++.+|++.||.+|||+.|++.+.++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         236 PNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             ccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence            00000000    0000     00113456678899999999999999999988753

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=2.6e-36  Score=316.51  Aligned_cols=256  Identities=26%  Similarity=0.440  Sum_probs=202.8

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEc-------CCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeC
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFR-------ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEK  421 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~-------~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~  421 (645)
                      .++|...++||+|+||.||++...       .....+|+|.++.. ......++.+|++++.++ +||||++++++|...
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            356778899999999999999763       23457999998754 334567788999999999 699999999999999


Q ss_pred             CeEEEEEEecCCCChhhhhhhc---------------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE
Q 042831          422 KELLLVYEFMPNGSLDSHLFKE---------------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML  486 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl  486 (645)
                      +..++||||+++|+|.+++...               ...+++..+..++.|++.||.|||+   .+++||||||+|||+
T Consensus        91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill  167 (314)
T cd05099          91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLV  167 (314)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEE
Confidence            9999999999999999998642               2358999999999999999999998   899999999999999


Q ss_pred             CCCCcEEEeeccCcccccccCCcc-eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchh
Q 042831          487 DSNFNAKIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVS  564 (645)
Q Consensus       487 d~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~  564 (645)
                      ++++.+||+|||+++......... .....++..|+|||.+.++.++.++||||||+++|||++ |+.||......   .
T Consensus       168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~---~  244 (314)
T cd05099         168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE---E  244 (314)
T ss_pred             cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH---H
Confidence            999999999999998654322111 112234467999999988889999999999999999999 88998643321   1


Q ss_pred             HHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          565 LLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       565 l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                          .......+...+     .    +......+.+++.+|++.+|++||++.|+++.|+.
T Consensus       245 ----~~~~~~~~~~~~-----~----~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~  292 (314)
T cd05099         245 ----LFKLLREGHRMD-----K----PSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDK  292 (314)
T ss_pred             ----HHHHHHcCCCCC-----C----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence                112222221111     1    11122456688899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=2.5e-36  Score=344.69  Aligned_cols=256  Identities=21%  Similarity=0.285  Sum_probs=201.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...++||+|+||.||+|++..+++.||+|++...   .....+++.+|++++++++||||+++++++.+.+..++||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            5788899999999999999999999999999998753   2234567999999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhc----------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeecc
Q 042831          429 EFMPNGSLDSHLFKE----------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG  498 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfG  498 (645)
                      ||+++|+|.+++...          ...+++..++.++.||++||+|||+   ++|+||||||+|||++.++.+||+|||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecC
Confidence            999999999988531          1345677889999999999999998   899999999999999999999999999


Q ss_pred             CcccccccCC-----------------cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCC
Q 042831          499 LARLVEHAKG-----------------SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQG  561 (645)
Q Consensus       499 la~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~  561 (645)
                      +++.......                 .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus       159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k  238 (932)
T PRK13184        159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK  238 (932)
T ss_pred             cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence            9986521110                 01122468999999999999999999999999999999999999997533211


Q ss_pred             chhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHhc
Q 042831          562 QVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRP-SIRQVIHVLN  624 (645)
Q Consensus       562 ~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~  624 (645)
                      .   ..   .    ..+   .++.-... ..+....+.+++.+|++.||++|| +++++++.|.
T Consensus       239 i---~~---~----~~i---~~P~~~~p-~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le  288 (932)
T PRK13184        239 I---SY---R----DVI---LSPIEVAP-YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLE  288 (932)
T ss_pred             h---hh---h----hhc---cChhhccc-cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            1   00   0    000   01100000 011224567788999999999996 5666666554

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=2.1e-36  Score=316.26  Aligned_cols=274  Identities=23%  Similarity=0.311  Sum_probs=207.3

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh--hhHHHHHHHHHHHHhcCCCCccEEEeeeeeC--CeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK--QGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~--~~~~l  426 (645)
                      .++|+..+.||+|+||.||+|.+..+|+.||+|.++....  .....+.+|+.++.+++|+|++++++++...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            3578889999999999999999999999999999864422  2234567899999999999999999998755  56899


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+. ++|.+++......+++.++..++.||++||.|||+   .+++||||||+||++++++.+||+|||++......
T Consensus        86 v~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~  161 (309)
T cd07845          86 VMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP  161 (309)
T ss_pred             EEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence            999996 58888886656779999999999999999999999   89999999999999999999999999999866432


Q ss_pred             CCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC--cc-----
Q 042831          507 KGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG--KL-----  578 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~--~l-----  578 (645)
                      .. ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+   ....+.+..+..  ..     
T Consensus       162 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  237 (309)
T cd07845         162 AK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE---QLDLIIQLLGTPNESIWPGFS  237 (309)
T ss_pred             cC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCChhhchhhh
Confidence            21 1222345778999998865 457899999999999999999999997544322   111111111100  00     


Q ss_pred             ----cccc--CccccCCCC---HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC-CCCCCC
Q 042831          579 ----LEAV--DPRLCRDFD---GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE-APLPAL  632 (645)
Q Consensus       579 ----~~~~--d~~l~~~~~---~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~-~~~p~~  632 (645)
                          ....  .........   ......+.+++.+|++.||++|||++|++++.|+. .++|.-
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~~  301 (309)
T cd07845         238 DLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCE  301 (309)
T ss_pred             cccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCCC
Confidence                0000  000000000   01134567789999999999999999999999987 455543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=2.5e-36  Score=314.97  Aligned_cols=255  Identities=28%  Similarity=0.483  Sum_probs=202.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCe----EEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNS----YIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~----~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      .++|...+.||+|+||.||+|.+..++.    .||+|.+.... .....++.+|+.++.+++||||++++++|... ..+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~   84 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ   84 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence            4567788999999999999999876665    57889886543 33345788999999999999999999998754 467


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +++||+++|+|.+++......+++..+..++.|++.||.|||+   ++++||||||+||+++.++.+||+|||+++....
T Consensus        85 ~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~  161 (303)
T cd05110          85 LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG  161 (303)
T ss_pred             eeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccccccC
Confidence            9999999999999997766678999999999999999999998   8999999999999999999999999999986543


Q ss_pred             cCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          506 AKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       506 ~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      .... ......++..|+|||++.+..++.++|||||||++|||++ |+.||......   ...+    ....+....  .
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~---~~~~----~~~~~~~~~--~  232 (303)
T cd05110         162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR---EIPD----LLEKGERLP--Q  232 (303)
T ss_pred             cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHCCCCCC--C
Confidence            2221 1222345678999999988889999999999999999997 99999653321   1111    111221110  0


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      +   ..    ....+..++..|+..+|++||+++++++.|+.
T Consensus       233 ~---~~----~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~  267 (303)
T cd05110         233 P---PI----CTIDVYMVMVKCWMIDADSRPKFKELAAEFSR  267 (303)
T ss_pred             C---CC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            1   11    22456788899999999999999999999885

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-37  Score=326.64  Aligned_cols=249  Identities=29%  Similarity=0.432  Sum_probs=211.6

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCChh
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD  437 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL~  437 (645)
                      -+||+|.||+||.|++..+...+|||.+.....+..+.+..|+.+-++|+|+|||+++|.|.+++.+-|.||.++||+|.
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            46999999999999999999999999998877777888999999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCC--CHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC-CCCcEEEeeccCcccccccCCcceeec
Q 042831          438 SHLFKENSLL--TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD-SNFNAKIGDFGLARLVEHAKGSQTTVL  514 (645)
Q Consensus       438 ~~l~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld-~~~~~kl~DfGla~~~~~~~~~~~~~~  514 (645)
                      ++|...-+++  ++...--..+||++||.|||+   +.|||||||-.|||++ -.|.+||+|||-++.+. +-+..+..+
T Consensus       661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA-ginP~TETF  736 (1226)
T KOG4279|consen  661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA-GINPCTETF  736 (1226)
T ss_pred             HHHHhccCCCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhc-cCCcccccc
Confidence            9998777777  778888899999999999998   8999999999999995 68899999999998764 234556678


Q ss_pred             ccCccccCccccccCC--CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCH
Q 042831          515 AGTMGYMAPECATTGK--ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDG  592 (645)
Q Consensus       515 ~gt~~y~aPE~~~~~~--~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~  592 (645)
                      .||..|||||++..|+  |+.++|||||||.+.||+|||+||-...... .    .++.   -|-      -+..+.++.
T Consensus       737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq-A----AMFk---VGm------yKvHP~iPe  802 (1226)
T KOG4279|consen  737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ-A----AMFK---VGM------YKVHPPIPE  802 (1226)
T ss_pred             ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh-H----hhhh---hcc------eecCCCCcH
Confidence            8999999999998875  8999999999999999999999996433221 0    0110   010      011234556


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          593 QQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       593 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      +...+...++++|..+||.+||++.++|+...
T Consensus       803 elsaeak~FilrcFepd~~~R~sA~~LL~DpF  834 (1226)
T KOG4279|consen  803 ELSAEAKNFILRCFEPDPCDRPSAKDLLQDPF  834 (1226)
T ss_pred             HHHHHHHHHHHHHcCCCcccCccHHHhccCcc
Confidence            66778888999999999999999999998653

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=2.4e-36  Score=306.76  Aligned_cols=247  Identities=31%  Similarity=0.437  Sum_probs=198.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeee-eCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCH-EKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~-~~~~~~lV~Ey  430 (645)
                      ++|...+.||+|+||.||++...  +..+|+|..+...  ..+.+.+|+.++++++|+|++++++++. .++..++|+||
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   81 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence            46788899999999999999875  6779999886443  3467899999999999999999999764 45678999999


Q ss_pred             cCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      +++++|.+++.+.. ..+++..+..++.|++.||+|||+   ++++||||||+||++++++.+||+|||+++......  
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--  156 (256)
T cd05082          82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--  156 (256)
T ss_pred             CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence            99999999987643 458999999999999999999998   899999999999999999999999999987543221  


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                        ....++..|+|||++....++.++|||||||++|||++ |+.||.....   ..+..++    ..+..     +..  
T Consensus       157 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~---~~~~~~~----~~~~~-----~~~--  220 (256)
T cd05082         157 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPRV----EKGYK-----MDA--  220 (256)
T ss_pred             --CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHH----hcCCC-----CCC--
Confidence              12334568999999988889999999999999999997 9999864322   1112111    11111     111  


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                        .......+.+++.+|++.+|++|||+.++++.|+.
T Consensus       221 --~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         221 --PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             --CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence              11223467788899999999999999999998863

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=3.1e-36  Score=310.20  Aligned_cols=257  Identities=24%  Similarity=0.360  Sum_probs=204.8

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcC----CCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee-CCe
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRE----TNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE-KKE  423 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~----~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~-~~~  423 (645)
                      ..++|...+.||+|+||.||+|.+..    ++..|++|++... .....+.+.+|+.++.+++|+|++++++++.. ...
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            45678889999999999999999875    3578999988654 34456778899999999999999999998876 467


Q ss_pred             EEEEEEecCCCChhhhhhhcC-------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEee
Q 042831          424 LLLVYEFMPNGSLDSHLFKEN-------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD  496 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~D  496 (645)
                      .++++||+++++|.+++....       ..+++..++.++.|++.||.|||+   .+++||||||+||++++++.+||+|
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d  160 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITD  160 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECC
Confidence            899999999999999986532       468999999999999999999998   8999999999999999999999999


Q ss_pred             ccCcccccccCCcc-eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhc
Q 042831          497 FGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYG  574 (645)
Q Consensus       497 fGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~  574 (645)
                      ||+++.+....... .....++..|+|||++.+..++.++|||||||++||+++ |+.||.....   ..+..++    .
T Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~----~  233 (280)
T cd05043         161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP---FEMAAYL----K  233 (280)
T ss_pred             CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH---HHHHHHH----H
Confidence            99998654322111 112345678999999988889999999999999999999 9999975432   1222211    1


Q ss_pred             CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          575 NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       575 ~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .+..     ......    ....+.+++.+|++.||++|||+.++++.|..
T Consensus       234 ~~~~-----~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~  275 (280)
T cd05043         234 DGYR-----LAQPIN----CPDELFAVMACCWALDPEERPSFSQLVQCLTD  275 (280)
T ss_pred             cCCC-----CCCCCc----CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence            1110     000111    12457789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=7.2e-36  Score=312.04  Aligned_cols=252  Identities=28%  Similarity=0.380  Sum_probs=204.4

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      +.|...+.||+|+||.||+|....+++.||+|.+....   .+..+++.+|++++++++|||++++.++|...+..++|+
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            45788899999999999999998889999999986432   334567889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||++ |+|.+.+......+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++......  
T Consensus        95 e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~--  168 (307)
T cd06607          95 EYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA--  168 (307)
T ss_pred             HhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCCC--
Confidence            9996 67777776555679999999999999999999998   89999999999999999999999999998754322  


Q ss_pred             cceeecccCccccCccccc---cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          509 SQTTVLAGTMGYMAPECAT---TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~---~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                         ....++..|+|||++.   .+.++.++||||||+++|||++|+.||......      ..........      .+.
T Consensus       169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~------~~~~~~~~~~------~~~  233 (307)
T cd06607         169 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQND------SPT  233 (307)
T ss_pred             ---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH------HHHHHHhcCC------CCC
Confidence               2345788999999874   456889999999999999999999998643321      1111111110      111


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      +.   .....+.+..++.+||+.+|++||++++++.+.++..
T Consensus       234 ~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~  272 (307)
T cd06607         234 LS---SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR  272 (307)
T ss_pred             CC---chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence            11   1123456788899999999999999999999988753

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=2.8e-36  Score=307.23  Aligned_cols=252  Identities=26%  Similarity=0.463  Sum_probs=202.4

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|...++||+|+||.||++.+.. +..+++|.+... ....+.+.+|++++++++|+|++++.+.+.. ...+++|||
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~   81 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF   81 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecC-CccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence            4578889999999999999998754 567999988654 3345688999999999999999999999887 778999999


Q ss_pred             cCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      +++++|.+++.+. ...+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++.........
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  158 (260)
T cd05073          82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT  158 (260)
T ss_pred             CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence            9999999999653 4568999999999999999999998   89999999999999999999999999999765432222


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ......++..|+|||++..+.++.++|+|||||+++|+++ |+.||......   .+..+    ..++....        
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~----~~~~~~~~--------  223 (260)
T cd05073         159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRA----LERGYRMP--------  223 (260)
T ss_pred             cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH---HHHHH----HhCCCCCC--------
Confidence            2222345677999999988889999999999999999998 99999754321   11221    11221110        


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                       ........+.+++.+|++++|++||++.++++.|+
T Consensus       224 -~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~  258 (260)
T cd05073         224 -RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD  258 (260)
T ss_pred             -CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence             11122346778889999999999999999999886

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.2e-37  Score=324.12  Aligned_cols=246  Identities=25%  Similarity=0.333  Sum_probs=195.0

Q ss_pred             cCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhc---CCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRL---RHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       360 LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l---~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      ||+|+||.||+|++..+++.||+|++....   ......+..|..++.+.   +||||+++++++...+..++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            799999999999999999999999986432   22334556677777665   699999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |+|..++.+ ...+++..+..++.||++||+|||+   .+|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        81 g~L~~~l~~-~~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~~~~  155 (330)
T cd05586          81 GELFWHLQK-EGRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTTNT  155 (330)
T ss_pred             ChHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CCccC
Confidence            999988854 4568999999999999999999998   899999999999999999999999999987533221 22334


Q ss_pred             cccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCH
Q 042831          514 LAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDG  592 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~  592 (645)
                      ..||..|+|||++.+. .++.++|||||||++|||++|+.||......       ........+..      .+...   
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~-------~~~~~i~~~~~------~~~~~---  219 (330)
T cd05586         156 FCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ-------QMYRNIAFGKV------RFPKN---  219 (330)
T ss_pred             ccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH-------HHHHHHHcCCC------CCCCc---
Confidence            5799999999998765 4799999999999999999999999753321       11111222211      11110   


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCC----CHHHHHHHhccC
Q 042831          593 QQIERLMIVGLWCAHPDENLRP----SIRQVIHVLNFE  626 (645)
Q Consensus       593 ~~~~~l~~l~~~Cl~~dP~~RP----s~~evl~~L~~~  626 (645)
                      .....+.+++.+||++||++||    ++.++++|.++.
T Consensus       220 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~  257 (330)
T cd05586         220 VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFA  257 (330)
T ss_pred             cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCcccc
Confidence            1123556788999999999998    789999998874

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.5e-36  Score=345.97  Aligned_cols=263  Identities=24%  Similarity=0.350  Sum_probs=205.9

Q ss_pred             HHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee--C
Q 042831          346 ELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--K  421 (645)
Q Consensus       346 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~--~  421 (645)
                      +.....++|.+.++||+|+||.||++.+..++..+|+|.+...  .......+..|+.++.+++||||+++++++..  .
T Consensus         7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~   86 (1021)
T PTZ00266          7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN   86 (1021)
T ss_pred             CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence            3344557899999999999999999999999999999998643  33456778999999999999999999998854  3


Q ss_pred             CeEEEEEEecCCCChhhhhhhc---CCCCCHHHHHHHHHHHHHHHHHHHhhc----CCCeeeccCCCCCeEECC------
Q 042831          422 KELLLVYEFMPNGSLDSHLFKE---NSLLTWEFRYKIAQDLASGLLYLQEEW----EQCVVHRDIKSSNIMLDS------  488 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~----~~~ivH~Dlkp~NILld~------  488 (645)
                      ..++|||||+++|+|.++|...   ...+++..++.|+.||+.||.|||+..    .++|+||||||+||||+.      
T Consensus        87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg  166 (1021)
T PTZ00266         87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG  166 (1021)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence            5789999999999999998642   357999999999999999999999832    145999999999999964      


Q ss_pred             -----------CCcEEEeeccCcccccccCCcceeecccCccccCcccccc--CCCCcchhHHHHHHHHHHHHcCCCCCC
Q 042831          489 -----------NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT--GKASKESDVYSFGIVALEIACGRKPIN  555 (645)
Q Consensus       489 -----------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~t~~sDV~SfGvll~elltG~~pf~  555 (645)
                                 ...+||+|||+++......  ......||+.|+|||++..  ..++.++|||||||+||||++|+.||.
T Consensus       167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~  244 (1021)
T PTZ00266        167 KITAQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH  244 (1021)
T ss_pred             cccccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence                       3348999999998653322  2234578999999999854  458899999999999999999999997


Q ss_pred             CCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       556 ~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .....     .. +......+.     +..+ ..    ....+..|+..||+.+|++||++.|++.+.+..
T Consensus       245 ~~~~~-----~q-li~~lk~~p-----~lpi-~~----~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik  299 (1021)
T PTZ00266        245 KANNF-----SQ-LISELKRGP-----DLPI-KG----KSKELNILIKNLLNLSAKERPSALQCLGYQIIK  299 (1021)
T ss_pred             cCCcH-----HH-HHHHHhcCC-----CCCc-CC----CCHHHHHHHHHHhcCChhHCcCHHHHhccHHHh
Confidence            43321     11 111111111     0001 11    124577888999999999999999999877654

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=4.1e-36  Score=311.87  Aligned_cols=263  Identities=25%  Similarity=0.380  Sum_probs=212.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|...+.||+|+||.||++....++..|++|.+........+.+.+|+.++++++|||++++++.|...+..++|+||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            57888899999999999999988888999999987655555678899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++++|.+++.+  ..+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++........ ..
T Consensus        99 ~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-~~  172 (293)
T cd06647          99 AGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KR  172 (293)
T ss_pred             CCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc-cc
Confidence            99999998854  357899999999999999999998   8999999999999999999999999999875543222 22


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ....++..|++||.+..+.++.++||||||+++||+++|+.||..........      .....+.      +...  ..
T Consensus       173 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~------~~~~~~~------~~~~--~~  238 (293)
T cd06647         173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNGT------PELQ--NP  238 (293)
T ss_pred             ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee------ehhcCCC------CCCC--Cc
Confidence            33468889999999988889999999999999999999999997544321110      0000110      1110  11


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC--CCCCCCC
Q 042831          592 GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA--PLPALPP  634 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~--~~p~~p~  634 (645)
                      ......+.+++..||+.+|++||++++++.+.++..  ++-.+||
T Consensus       239 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~~~~  283 (293)
T cd06647         239 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSSLTP  283 (293)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcccccccc
Confidence            122345778889999999999999999999988763  3445554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.7e-36  Score=309.56  Aligned_cols=255  Identities=25%  Similarity=0.429  Sum_probs=204.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCe----EEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNS----YIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~----~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .+|...+.||+|+||.||+|.+..+|.    .+|+|...... .....++.+|+.++.+++|+|+++++++|.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            467778999999999999999876554    68999886553 3456788999999999999999999999987 78899


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      |+||+++|+|.+++......+++..+..++.|++.||+|||+   .+++||||||+||++++++.+||+|||+++.....
T Consensus        86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~  162 (279)
T cd05057          86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD  162 (279)
T ss_pred             EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence            999999999999998776779999999999999999999998   99999999999999999999999999999866532


Q ss_pred             CCcce-eecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          507 KGSQT-TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       507 ~~~~~-~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      ..... ....++..|+|||.+....++.++|+||||++++|+++ |+.||......   .+.+.    ...+...  -.+
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~----~~~~~~~--~~~  233 (279)
T cd05057         163 EKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV---EIPDL----LEKGERL--PQP  233 (279)
T ss_pred             ccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH---HHHHH----HhCCCCC--CCC
Confidence            22111 11223567999999988889999999999999999998 99999754321   11221    1122110  001


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .       .....+..++..||..+|++||++.++++.|..-
T Consensus       234 ~-------~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~  268 (279)
T cd05057         234 P-------ICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM  268 (279)
T ss_pred             C-------CCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            1       1123567788999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=1.4e-35  Score=303.64  Aligned_cols=252  Identities=28%  Similarity=0.401  Sum_probs=192.4

Q ss_pred             CccCcCCcEEEEEEEEcC--CCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCC
Q 042831          358 QKLGQGGFGGVYKGFFRE--TNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNG  434 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~--~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~g  434 (645)
                      +.||+|+||.||+|...+  ++..+|+|.++... ......+.+|+.++++++|||++++++++.+....++||||+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            369999999999998653  45679999887543 334467889999999999999999999999999999999999999


Q ss_pred             ChhhhhhhcC----CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc-
Q 042831          435 SLDSHLFKEN----SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS-  509 (645)
Q Consensus       435 sL~~~l~~~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~-  509 (645)
                      +|.+++....    ...++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++........ 
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~  157 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV  157 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence            9999986432    356778888999999999999998   89999999999999999999999999998754322211 


Q ss_pred             ceeecccCccccCccccccC-------CCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccc
Q 042831          510 QTTVLAGTMGYMAPECATTG-------KASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA  581 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~-------~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~  581 (645)
                      ......++..|+|||++...       .++.++|+||||+++|||++ |+.||......+   .....    ..+.....
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~~~~~----~~~~~~~~  230 (269)
T cd05087         158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ---VLTYT----VREQQLKL  230 (269)
T ss_pred             cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH---HHHHH----hhcccCCC
Confidence            11234567889999988542       35789999999999999996 999997543221   11111    11111222


Q ss_pred             cCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       582 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .++.+....    .+.+..++..|+ .+|++|||++||++.|.
T Consensus       231 ~~~~~~~~~----~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         231 PKPRLKLPL----SDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCCccCCCC----ChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            233332222    223555677898 68999999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=4e-36  Score=308.41  Aligned_cols=255  Identities=24%  Similarity=0.386  Sum_probs=204.4

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcC-----CCeEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRE-----TNSYIAVKRVSQGSKQ-GIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      ++|...+.||+|+||.||+|+...     +.+.|++|.+...... ..+++.+|++++++++|+|++++++++.+.+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            568888999999999999999753     3467999988655443 5678999999999999999999999999999999


Q ss_pred             EEEEecCCCChhhhhhhcC--------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeec
Q 042831          426 LVYEFMPNGSLDSHLFKEN--------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF  497 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~Df  497 (645)
                      +||||+++|+|.+++....        ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.++++||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEccc
Confidence            9999999999999986433        158999999999999999999998   89999999999999999999999999


Q ss_pred             cCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCC
Q 042831          498 GLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNG  576 (645)
Q Consensus       498 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~  576 (645)
                      |+++..............++..|+|||.+.+...+.++||||||++++||++ |..||......   ....    ....+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~---~~~~----~~~~~  234 (275)
T cd05046         162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE---EVLN----RLQAG  234 (275)
T ss_pred             ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH---HHHH----HHHcC
Confidence            9987543322222333456778999999988889999999999999999998 88888643321   1111    11122


Q ss_pred             ccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       577 ~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .+....    ...    ....+.+++.+||+.+|++||++.|+++.|+
T Consensus       235 ~~~~~~----~~~----~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         235 KLELPV----PEG----CPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CcCCCC----CCC----CCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            211111    111    2246778899999999999999999999886

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=5.2e-36  Score=303.85  Aligned_cols=251  Identities=29%  Similarity=0.481  Sum_probs=204.1

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-----hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-----KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      +|...+.||+|++|.||+|....++..|++|.+....     .+..+.+.+|+.++++++|+|++++++++......++|
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            4667789999999999999998889999999886532     34567899999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      +||+++++|.+++.+. ..+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|||++.......
T Consensus        81 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~  156 (258)
T cd06632          81 LELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS  156 (258)
T ss_pred             EEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence            9999999999998644 468999999999999999999998   899999999999999999999999999987654322


Q ss_pred             CcceeecccCccccCccccccCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~-~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                        ......++..|++||.+.... ++.++|+||||+++|||++|+.||.....      .+..+........     +.+
T Consensus       157 --~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~-----~~~  223 (258)
T cd06632         157 --FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG------VAAVFKIGRSKEL-----PPI  223 (258)
T ss_pred             --cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH------HHHHHHHHhcccC-----CCc
Confidence              233456888999999987766 89999999999999999999999975431      1111111111111     111


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                          +......+.+++.+|++.+|++||++++++++.+
T Consensus       224 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~  257 (258)
T cd06632         224 ----PDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPF  257 (258)
T ss_pred             ----CCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCC
Confidence                1112245667889999999999999999998754

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=5.7e-36  Score=305.68  Aligned_cols=254  Identities=24%  Similarity=0.383  Sum_probs=201.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-----ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC--CeE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-----SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KEL  424 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~--~~~  424 (645)
                      ++|...+.||+|+||.||+|.+..++..||+|.+...     .....+.+.+|+.++.+++||||+++++++.+.  ..+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            4788899999999999999999999999999987532     123456788999999999999999999988763  468


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++||||+++++|.+++... ..+++.....++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++...
T Consensus        82 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~  157 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ  157 (265)
T ss_pred             EEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence            8999999999999988644 457889999999999999999998   899999999999999999999999999987553


Q ss_pred             ccCC--cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          505 HAKG--SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       505 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      ....  .......++..|+|||.+.+..++.++|||||||++|||++|+.||......      ..........     .
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~-----~  226 (265)
T cd06652         158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM------AAIFKIATQP-----T  226 (265)
T ss_pred             cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH------HHHHHHhcCC-----C
Confidence            2211  1123345888999999998888999999999999999999999999743211      1111111111     0


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .    ...+......+..++..|+. +|++||+++|++++.+.
T Consensus       227 ~----~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~  264 (265)
T cd06652         227 N----PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFV  264 (265)
T ss_pred             C----CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCccc
Confidence            1    11222334556677788884 99999999999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=6e-36  Score=305.38  Aligned_cols=253  Identities=30%  Similarity=0.471  Sum_probs=201.7

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC------hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS------KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~------~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      +|...+.||+|+||.||+|... +++.+|+|.+....      ......+.+|++++++++|+|+++++++|.+.+..++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI   79 (265)
T ss_pred             CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence            4677889999999999999874 67889999886432      2334668899999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      |+||+++++|.+++.+. ..+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++......
T Consensus        80 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  155 (265)
T cd06631          80 FMEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV  155 (265)
T ss_pred             EEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence            99999999999998643 467899999999999999999998   89999999999999999999999999998754321


Q ss_pred             C-----CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc
Q 042831          507 K-----GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA  581 (645)
Q Consensus       507 ~-----~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~  581 (645)
                      .     ........++..|+|||.+.+..++.++||||||++++||++|+.||........     ........+     
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-----~~~~~~~~~-----  225 (265)
T cd06631         156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA-----MFYIGAHRG-----  225 (265)
T ss_pred             cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH-----HHHhhhccC-----
Confidence            1     1112335688999999999988899999999999999999999999974332111     000000001     


Q ss_pred             cCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       582 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ..+.+...    ....+..++.+||+++|++||++.|++++.+
T Consensus       226 ~~~~~~~~----~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~  264 (265)
T cd06631         226 LMPRLPDS----FSAAAIDFVTSCLTRDQHERPSALQLLRHDF  264 (265)
T ss_pred             CCCCCCCC----CCHHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence            11222222    2345678889999999999999999998765

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=3.8e-36  Score=306.52  Aligned_cols=260  Identities=27%  Similarity=0.389  Sum_probs=210.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|+..+.||+|++|.||++.+..+++.+++|++.... ....+++.+|++++++++||||+++++.+...+..++|+||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            35777889999999999999999889999999987653 34567889999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +++++|.+++......+++..+..++.|+++||.|||+  ..+++|+||||+||++++++.+||+|||.+........  
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--  156 (265)
T cd06605          81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA--  156 (265)
T ss_pred             cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcC--CCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh--
Confidence            99999999987655788999999999999999999997  37899999999999999999999999999875532211  


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                       ....++..|+|||.+.+..++.++||||||+++++|++|+.||....... ....+.+.... .+.     .+.+... 
T Consensus       157 -~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~-~~~-----~~~~~~~-  227 (265)
T cd06605         157 -KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP-DGIFELLQYIV-NEP-----PPRLPSG-  227 (265)
T ss_pred             -hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc-ccHHHHHHHHh-cCC-----CCCCChh-
Confidence             11568889999999988899999999999999999999999997543211 11122211111 111     1111111 


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                        .....+.+++..|++.+|++|||+.+++.+.++.
T Consensus       228 --~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~  261 (265)
T cd06605         228 --KFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIK  261 (265)
T ss_pred             --hcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhh
Confidence              1334577888999999999999999999998864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=4.2e-36  Score=311.43  Aligned_cols=269  Identities=22%  Similarity=0.280  Sum_probs=205.2

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC--CeEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KELLLV  427 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~--~~~~lV  427 (645)
                      ++|+..+.||+|+||.||+|.+..+++.+++|.++...  ......+.+|+.++.+++|||++++++++...  +..++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            46888899999999999999999889999999986543  22334677899999999999999999998877  889999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||++ ++|.+++......+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++......
T Consensus        85 ~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~  160 (293)
T cd07843          85 MEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL  160 (293)
T ss_pred             ehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence            99996 58988887656679999999999999999999998   899999999999999999999999999988654332


Q ss_pred             CcceeecccCccccCccccccCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchh-HHH-------HHHHHhc----
Q 042831          508 GSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGRKPINPKAPQGQVS-LLQ-------WVWDLYG----  574 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~-~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~-l~~-------~~~~~~~----  574 (645)
                       .......++..|+|||.+.+.. .+.++|+||||++++||++|+.||.......... +..       ..|..+.    
T Consensus       161 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (293)
T cd07843         161 -KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPG  239 (293)
T ss_pred             -cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccch
Confidence             1222345788999999887644 6899999999999999999999997544221110 000       0011000    


Q ss_pred             --CCccccccCccccCCCCHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          575 --NGKLLEAVDPRLCRDFDGQ-QIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       575 --~~~l~~~~d~~l~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                        ...........+...+... ..+.+.+++..|++.+|++|||+.|++++-|+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         240 AKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             hcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence              0011111111111112111 24567788899999999999999999988664

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=3.1e-36  Score=318.75  Aligned_cols=257  Identities=26%  Similarity=0.419  Sum_probs=203.3

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCC-------CeEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeee
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRET-------NSYIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHE  420 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~-------~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~  420 (645)
                      ...+|...+.||+|+||.||++.....       +..||+|.+... .....+++.+|++++.++ +||||++++++|..
T Consensus        10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (334)
T cd05100          10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   89 (334)
T ss_pred             CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence            345688899999999999999986432       246899988754 344567899999999999 79999999999999


Q ss_pred             CCeEEEEEEecCCCChhhhhhhc---------------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeE
Q 042831          421 KKELLLVYEFMPNGSLDSHLFKE---------------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM  485 (645)
Q Consensus       421 ~~~~~lV~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NIL  485 (645)
                      .+..++++||+++|+|.+++.+.               ...+++.++..++.|++.||.|||+   .+++||||||+|||
T Consensus        90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nil  166 (334)
T cd05100          90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVL  166 (334)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEE
Confidence            99999999999999999998642               2358899999999999999999998   89999999999999


Q ss_pred             ECCCCcEEEeeccCcccccccCCcc-eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCch
Q 042831          486 LDSNFNAKIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQV  563 (645)
Q Consensus       486 ld~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~  563 (645)
                      +++++.+||+|||+++......... .....++..|+|||.+....++.++||||||+++|||++ |+.||......   
T Consensus       167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---  243 (334)
T cd05100         167 VTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE---  243 (334)
T ss_pred             EcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH---
Confidence            9999999999999997654322111 122234567999999999899999999999999999998 88888643321   


Q ss_pred             hHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          564 SLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       564 ~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                         +. ......+...+         .+......+.+++.+|++.+|++||++.|+++.|+.
T Consensus       244 ---~~-~~~~~~~~~~~---------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~  292 (334)
T cd05100         244 ---EL-FKLLKEGHRMD---------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDR  292 (334)
T ss_pred             ---HH-HHHHHcCCCCC---------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence               11 11111211111         111223467788999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=8.4e-36  Score=300.27  Aligned_cols=253  Identities=30%  Similarity=0.464  Sum_probs=209.1

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecC
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP  432 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~  432 (645)
                      +|...+.||+|++|.||++....+++.+++|++........+++.+|++++++++|+|++++++++...+..++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            46778899999999999999988899999999977665567889999999999999999999999999999999999999


Q ss_pred             CCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCccee
Q 042831          433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT  512 (645)
Q Consensus       433 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~  512 (645)
                      +++|.+++......+++..+..++.|+++||.|||.   .+++|+||+|+||++++++.++|+|||.+........  ..
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~  155 (253)
T cd05122          81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--RN  155 (253)
T ss_pred             CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccc--cc
Confidence            999999987665689999999999999999999998   9999999999999999999999999999876654322  33


Q ss_pred             ecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCH
Q 042831          513 VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDG  592 (645)
Q Consensus       513 ~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~  592 (645)
                      ...++..|++||.+.....+.++||||||++++||++|+.||......      ....... ....     +.+...  .
T Consensus       156 ~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~-~~~~-----~~~~~~--~  221 (253)
T cd05122         156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM------KALFKIA-TNGP-----PGLRNP--E  221 (253)
T ss_pred             ceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH------HHHHHHH-hcCC-----CCcCcc--c
Confidence            456888999999998888999999999999999999999999754321      1111110 1111     111100  0


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          593 QQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       593 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .....+.+++..|++.||++|||+.|++++.|
T Consensus       222 ~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         222 KWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             ccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            01346778889999999999999999998753

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=6.3e-36  Score=303.10  Aligned_cols=251  Identities=23%  Similarity=0.392  Sum_probs=204.7

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +|...+.||+|++|.||++....+++.+|+|.+...  .....+.+.+|++++++++|||++++++.+..++..++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            477789999999999999999989999999998654  334567899999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC-CcEEEeeccCcccccccCC
Q 042831          431 MPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN-FNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       431 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~-~~~kl~DfGla~~~~~~~~  508 (645)
                      +++++|.+++.+. ...+++..+..++.|++.+|.|||+   ++++|+||+|+||+++++ ..+||+|||++....... 
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-  156 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-  156 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence            9999999999764 4568999999999999999999998   899999999999999854 468999999998654322 


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                       ......++..|+|||.+.....+.++||||||+++++|++|+.||......   ......   . .+....     +  
T Consensus       157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~---~~~~~~---~-~~~~~~-----~--  221 (256)
T cd08220         157 -KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP---ALVLKI---M-SGTFAP-----I--  221 (256)
T ss_pred             -cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH---HHHHHH---H-hcCCCC-----C--
Confidence             222346788999999998888999999999999999999999999754322   111111   1 111111     1  


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        .......+..++..||+++|++|||++|++++..
T Consensus       222 --~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~  255 (256)
T cd08220         222 --SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPI  255 (256)
T ss_pred             --CCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCC
Confidence              1112345678889999999999999999998743

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.5e-35  Score=306.57  Aligned_cols=262  Identities=26%  Similarity=0.343  Sum_probs=208.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC--CeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~--~~~~lV~  428 (645)
                      ++|...+.||.|++|.||++.+..+++.+|+|.+.... .....++.+|++++++++||||++++++|...  +.+++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            36778899999999999999999889999999987543 34567799999999999999999999998653  4789999


Q ss_pred             EecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          429 EFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       429 Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      ||+++++|.+++..   ....+++.....++.||+.||.|||+   .+++|+||+|+||++++++.++|+|||++.....
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  157 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN  157 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence            99999999987753   34568999999999999999999998   8999999999999999999999999999875432


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC--CCchhHHHHHHHHhcCCccccccC
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAP--QGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~--~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ..   .....++..|+|||.+.+..++.++|||||||++|||++|+.||.....  .....+..+..    ..... .+.
T Consensus       158 ~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~-~~~  229 (287)
T cd06621         158 SL---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV----NMPNP-ELK  229 (287)
T ss_pred             cc---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHh----cCCch-hhc
Confidence            21   1234578899999999988999999999999999999999999986532  11122222221    11111 111


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ...  .......+.+.+++.+|++.+|++|||+.|++++.+..
T Consensus       230 ~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~  270 (287)
T cd06621         230 DEP--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIK  270 (287)
T ss_pred             cCC--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccc
Confidence            111  00112345678899999999999999999999999874

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=7.5e-36  Score=303.97  Aligned_cols=255  Identities=31%  Similarity=0.472  Sum_probs=205.4

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh--hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK--QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +|...+.||+|+||.||+|....+++.|++|.+.....  ...+++.+|++++++++|+||+++++.+...+..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            47778999999999999999988899999999876543  4678899999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +++++|.+++... ..+++..+..++.|+++||.|||+   .+++|+||+|+||++++++.+||+|||++..........
T Consensus        81 ~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~  156 (264)
T cd06626          81 CSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM  156 (264)
T ss_pred             CCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc
Confidence            9999999988653 458899999999999999999998   899999999999999999999999999988664332221


Q ss_pred             e---eecccCccccCccccccCC---CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          511 T---TVLAGTMGYMAPECATTGK---ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       511 ~---~~~~gt~~y~aPE~~~~~~---~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      .   ....++..|++||++....   .+.++||||||++++|+++|+.||.......     ....... .+     ..+
T Consensus       157 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-----~~~~~~~-~~-----~~~  225 (264)
T cd06626         157 GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-----QIMFHVG-AG-----HKP  225 (264)
T ss_pred             cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-----HHHHHHh-cC-----CCC
Confidence            1   1356788999999988766   8899999999999999999999997443211     1111110 11     111


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .+....  .....+.+++.+|++.+|++||++++++.+.+
T Consensus       226 ~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~  263 (264)
T cd06626         226 PIPDSL--QLSPEGKDFLDRCLESDPKKRPTASELLQHPF  263 (264)
T ss_pred             CCCccc--ccCHHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence            111110  11345667889999999999999999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=8.6e-36  Score=304.88  Aligned_cols=253  Identities=28%  Similarity=0.420  Sum_probs=202.5

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcC-CCeEEEEEEeccC----------ChhhHHHHHHHHHHHHh-cCCCCccEEEeeeee
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRE-TNSYIAVKRVSQG----------SKQGIKEYASEVKIISR-LRHRNLVQLLGWCHE  420 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~-~~~~vavK~~~~~----------~~~~~~~~~~Ei~~l~~-l~H~nlv~l~~~~~~  420 (645)
                      +|+..+.||+|+||.||+|.+.. +++.+|+|.+...          ......++.+|+.++.+ ++|||++++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            47778999999999999999987 6789999987532          22345667889998875 799999999999999


Q ss_pred             CCeEEEEEEecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeec
Q 042831          421 KKELLLVYEFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF  497 (645)
Q Consensus       421 ~~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~Df  497 (645)
                      ++..++||||+++++|.+++..   ....+++..++.++.|++.||.|||+  ..+++|+||+|+||+++.++.+||+||
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~df  158 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDF  158 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecc
Confidence            9999999999999999988743   34578999999999999999999995  267999999999999999999999999


Q ss_pred             cCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCc
Q 042831          498 GLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK  577 (645)
Q Consensus       498 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~  577 (645)
                      |++.......  ......++..|++||.+.++.++.++||||||+++|||++|+.||......   ...   .. ..++.
T Consensus       159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~---~~~---~~-~~~~~  229 (269)
T cd08528         159 GLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML---SLA---TK-IVEAV  229 (269)
T ss_pred             cceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH---HHH---HH-Hhhcc
Confidence            9998654332  333456888999999999888999999999999999999999998643211   111   11 11111


Q ss_pred             cccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          578 LLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       578 l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ....    .    .......+.+++.+|++.||++||++.|+..++.
T Consensus       230 ~~~~----~----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         230 YEPL----P----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             CCcC----C----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            1111    0    0012245778889999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=3.6e-36  Score=307.58  Aligned_cols=248  Identities=31%  Similarity=0.477  Sum_probs=197.2

Q ss_pred             CccCcCCcEEEEEEEEcCCC------eEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          358 QKLGQGGFGGVYKGFFRETN------SYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~------~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +.||+|+||.||+|+..+..      +.+|+|.+.... .....++.+|++++++++||||++++++|...+..++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            46999999999999986433      689999886543 34567889999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhc------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC-----cEEEeeccC
Q 042831          431 MPNGSLDSHLFKE------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF-----NAKIGDFGL  499 (645)
Q Consensus       431 ~~~gsL~~~l~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~-----~~kl~DfGl  499 (645)
                      +++++|.+++...      ...+++..+..++.|++.||.|||+   .+++|+||||+||+++.+.     .+||+|||+
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence            9999999999642      2357899999999999999999998   8999999999999999877     899999999


Q ss_pred             cccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCc
Q 042831          500 ARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGK  577 (645)
Q Consensus       500 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~  577 (645)
                      ++........ ......++..|+|||++.++.++.++|||||||++|||++ |+.||.....   ......+    ..+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~---~~~~~~~----~~~~  230 (269)
T cd05044         158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN---QEVLQHV----TAGG  230 (269)
T ss_pred             ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH---HHHHHHH----hcCC
Confidence            8755322211 1122345678999999999999999999999999999998 9999864332   1111111    1111


Q ss_pred             cccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          578 LLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       578 l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ..         .........+.+++.+||+++|++||++.++++.|+
T Consensus       231 ~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         231 RL---------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             cc---------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            00         111122356778999999999999999999999885

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=4.5e-36  Score=310.94  Aligned_cols=250  Identities=29%  Similarity=0.398  Sum_probs=207.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|++|.||++.+..+++.+|+|.+...   ..+..+.+.+|++++++++||||+++++++..++..++||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            4678889999999999999999988999999998643   2234567889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++++|.+++... ..+++..+..++.|+++||.|||+   .+++|+||+|+||+++.++.+||+|||+++.....  
T Consensus        81 e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~--  154 (290)
T cd05580          81 EYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR--  154 (290)
T ss_pred             ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC--
Confidence            999999999998654 578999999999999999999998   99999999999999999999999999999865433  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                        .....+++.|+|||.+.+...+.++||||||++++||++|+.||......   .    .......+..      .+..
T Consensus       155 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~----~~~~~~~~~~------~~~~  219 (290)
T cd05580         155 --TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI---Q----IYEKILEGKV------RFPS  219 (290)
T ss_pred             --CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---H----HHHHHhcCCc------cCCc
Confidence              23346889999999998888999999999999999999999999754311   1    1111111211      1111


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~  626 (645)
                      ..    ...+.+++.+||+.||.+||     +++|++++.++.
T Consensus       220 ~~----~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~  258 (290)
T cd05580         220 FF----SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFA  258 (290)
T ss_pred             cC----CHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccc
Confidence            11    34667788999999999999     899999998864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.7e-37  Score=294.88  Aligned_cols=255  Identities=26%  Similarity=0.379  Sum_probs=208.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-----h---hhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCC
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-----K---QGIKEYASEVKIISRL-RHRNLVQLLGWCHEKK  422 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-----~---~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~  422 (645)
                      +.|...+.||.|..+.|-++.++.+|...|+|++....     +   +-.+.-.+|+.+|+++ .||+|+++.+.++.+.
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s   96 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA   96 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence            45777889999999999999999999999999885421     1   1233456799999998 5999999999999999


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      .+++|+|.|+.|.|.++|. ..-.+++....+|++|+.+|+.|||.   ++|+||||||+|||+|+|.++||+|||.++.
T Consensus        97 F~FlVFdl~prGELFDyLt-s~VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFGFa~~  172 (411)
T KOG0599|consen   97 FVFLVFDLMPRGELFDYLT-SKVTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFGFACQ  172 (411)
T ss_pred             hhhhhhhhcccchHHHHhh-hheeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEeccceeec
Confidence            9999999999999999994 34568999999999999999999999   9999999999999999999999999999987


Q ss_pred             ccccCCcceeecccCccccCccccc------cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECAT------TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG  576 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~  576 (645)
                      +..  +......+||++|+|||.+.      ...|+...|+|++||++|-|+.|.+||-...+   ..    +..++.+|
T Consensus       173 l~~--GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ---ml----MLR~ImeG  243 (411)
T KOG0599|consen  173 LEP--GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ---ML----MLRMIMEG  243 (411)
T ss_pred             cCC--chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH---HH----HHHHHHhc
Confidence            654  45667789999999999874      23588999999999999999999999964221   11    12233344


Q ss_pred             ccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       577 ~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      +..- -.|..     .+......+|+.+||+.||.+|.|++|+|+|.++
T Consensus       244 kyqF-~speW-----adis~~~KdLIsrlLqVdp~~Ritake~LaHpff  286 (411)
T KOG0599|consen  244 KYQF-RSPEW-----ADISATVKDLISRLLQVDPTKRITAKEALAHPFF  286 (411)
T ss_pred             cccc-CCcch-----hhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence            3321 11111     1234567788999999999999999999999997

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=2.4e-35  Score=301.73  Aligned_cols=252  Identities=26%  Similarity=0.420  Sum_probs=189.7

Q ss_pred             CccCcCCcEEEEEEEEcC--CCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCC
Q 042831          358 QKLGQGGFGGVYKGFFRE--TNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNG  434 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~--~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~g  434 (645)
                      ++||+|+||.||+|....  ....+++|.+.... ......+.+|++.++.++|+||++++++|......++||||+++|
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            369999999999997543  34578999876443 344567889999999999999999999999999999999999999


Q ss_pred             ChhhhhhhcC----CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc-
Q 042831          435 SLDSHLFKEN----SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS-  509 (645)
Q Consensus       435 sL~~~l~~~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~-  509 (645)
                      +|.+++....    ...++.....++.||+.||+|||+   .+|+||||||+|||+++++.+||+|||+++........ 
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~  157 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI  157 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence            9999986543    235678889999999999999998   89999999999999999999999999998654322111 


Q ss_pred             ceeecccCccccCcccccc-------CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccc
Q 042831          510 QTTVLAGTMGYMAPECATT-------GKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA  581 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~-------~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~  581 (645)
                      ......++..|+|||++..       ..++.++|||||||++|||++ |+.||....+.   ....   ....++ ....
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~---~~~~---~~~~~~-~~~~  230 (269)
T cd05042         158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE---QVLK---QVVREQ-DIKL  230 (269)
T ss_pred             ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH---HHHH---HHhhcc-CccC
Confidence            1122345678999998743       356889999999999999999 78888644321   1111   111111 1122


Q ss_pred             cCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       582 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .++.+...++    ..+..++..|+ .||++|||+++|++.|.
T Consensus       231 ~~~~~~~~~~----~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         231 PKPQLDLKYS----DRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             CCCcccccCC----HHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            2232222222    34445667787 59999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=3.8e-36  Score=312.83  Aligned_cols=250  Identities=24%  Similarity=0.332  Sum_probs=202.7

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCCh
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL  436 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL  436 (645)
                      ...||+|+||.||++....+++.||+|.+........+.+.+|+.++..++|||++++++.+..++..++|+||+++++|
T Consensus        26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L  105 (297)
T cd06659          26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL  105 (297)
T ss_pred             hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence            45799999999999999888999999998765555567788999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeeccc
Q 042831          437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG  516 (645)
Q Consensus       437 ~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~g  516 (645)
                      ..++..  ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++....... .......+
T Consensus       106 ~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~~~~~  179 (297)
T cd06659         106 TDIVSQ--TRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKSLVG  179 (297)
T ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhccccc-ccccceec
Confidence            987743  468999999999999999999998   899999999999999999999999999987543322 12233568


Q ss_pred             CccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHH
Q 042831          517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIE  596 (645)
Q Consensus       517 t~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~  596 (645)
                      +..|+|||++.+..++.++|||||||+++||++|+.||......   .....+    .....     +....  ......
T Consensus       180 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---~~~~~~----~~~~~-----~~~~~--~~~~~~  245 (297)
T cd06659         180 TPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV---QAMKRL----RDSPP-----PKLKN--AHKISP  245 (297)
T ss_pred             CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHH----hccCC-----CCccc--cCCCCH
Confidence            89999999998888999999999999999999999999743321   111111    11110     00000  001123


Q ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          597 RLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       597 ~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .+.+++..|++.+|++||++++++++.++.
T Consensus       246 ~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~  275 (297)
T cd06659         246 VLRDFLERMLTREPQERATAQELLDHPFLL  275 (297)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHhhChhhc
Confidence            567788999999999999999999987764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=1.5e-35  Score=301.64  Aligned_cols=258  Identities=28%  Similarity=0.414  Sum_probs=212.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|+..+.||+|++|.||++++..+++.|++|++..... ...+.+.+|+..+.+++|+|++++++++...+..++|+||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            367888999999999999999999999999999876544 4567899999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +++++|.+++... ..+++..++.++.|+++||.|||+.  .+++|+||+|+||+++.++.++|+|||++......... 
T Consensus        81 ~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~-  156 (264)
T cd06623          81 MDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ-  156 (264)
T ss_pred             cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc-
Confidence            9999999998654 6789999999999999999999962  78999999999999999999999999999866433222 


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      .....++..|+|||.+.+..++.++|+||||+++|||++|+.||..........+..++.    .+.     .+.+... 
T Consensus       157 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~-  226 (264)
T cd06623         157 CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC----DGP-----PPSLPAE-  226 (264)
T ss_pred             ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh----cCC-----CCCCCcc-
Confidence            223457889999999999899999999999999999999999997654322222222221    111     1111111 


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                        .....+.+++.+|++++|++||+++|++++.+.
T Consensus       227 --~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~  259 (264)
T cd06623         227 --EFSPEFRDFISACLQKDPKKRPSAAELLQHPFI  259 (264)
T ss_pred             --cCCHHHHHHHHHHccCChhhCCCHHHHHhCHHH
Confidence              033567788899999999999999999998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=1.2e-35  Score=307.18  Aligned_cols=254  Identities=26%  Similarity=0.328  Sum_probs=207.7

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      |...+.||+|++|.||++....+++.+++|++........+.+.+|+.++++++|+|++++++++...+..++|+||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            44567899999999999999888999999998766555667789999999999999999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      ++|.+++..  ..+++..+..++.|++.||+|||+   .+++||||+|+||+++.++.++|+|||++....... .....
T Consensus       101 ~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~-~~~~~  174 (285)
T cd06648         101 GALTDIVTH--TRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV-PRRKS  174 (285)
T ss_pred             CCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCC-ccccc
Confidence            999998865  568999999999999999999998   899999999999999999999999999887543322 12233


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..|+..|+|||.+.+..++.++||||||++++||++|+.||......      ..... ...+.     .+.+..  ...
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~------~~~~~-~~~~~-----~~~~~~--~~~  240 (285)
T cd06648         175 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL------QAMKR-IRDNL-----PPKLKN--LHK  240 (285)
T ss_pred             ccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH------HHHHH-HHhcC-----CCCCcc--ccc
Confidence            56889999999998888999999999999999999999999753321      11111 11111     111111  111


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          594 QIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ....+.+++.+||+.+|++||++.+++++.+...
T Consensus       241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  274 (285)
T cd06648         241 VSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAK  274 (285)
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHccCccccc
Confidence            2346788899999999999999999999988764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=6.9e-36  Score=312.85  Aligned_cols=269  Identities=19%  Similarity=0.278  Sum_probs=202.2

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcC--CCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC--CeEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRE--TNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KELL  425 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~--~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~--~~~~  425 (645)
                      +|...++||+|++|.||+|....  +++.||+|.+....   ....+.+.+|+.++.+++|||++++++++.+.  ...+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            46778899999999999999987  78999999987632   34456778899999999999999999999988  7899


Q ss_pred             EEEEecCCCChhhhhhhc----CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC----CCcEEEeec
Q 042831          426 LVYEFMPNGSLDSHLFKE----NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS----NFNAKIGDF  497 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~----~~~~kl~Df  497 (645)
                      +||||+++ +|.+.+...    ...+++..++.++.||+.||.|||+   .+++||||||+||+++.    ++.+||+||
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            99999975 666655321    2368999999999999999999998   89999999999999999    999999999


Q ss_pred             cCcccccccCC--cceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc------hhHHHH
Q 042831          498 GLARLVEHAKG--SQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQ------VSLLQW  568 (645)
Q Consensus       498 Gla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~------~~l~~~  568 (645)
                      |+++.......  .......++..|+|||.+.+. .++.++|||||||+++||++|+.||........      ......
T Consensus       157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (316)
T cd07842         157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER  236 (316)
T ss_pred             ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence            99986543322  112234678899999987664 578999999999999999999999986554321      011111


Q ss_pred             HHHHhcCC------------ccccccCccccCCCC----H-------HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          569 VWDLYGNG------------KLLEAVDPRLCRDFD----G-------QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       569 ~~~~~~~~------------~l~~~~d~~l~~~~~----~-------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      +.......            ......+......++    .       .....+.+++.+||++||++|||+.|++++.++
T Consensus       237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            11111100            000000000000011    0       223467889999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=1.6e-35  Score=305.33  Aligned_cols=248  Identities=25%  Similarity=0.315  Sum_probs=193.7

Q ss_pred             ccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHH---hcCCCCccEEEeeeeeCCeEEEEEEecC
Q 042831          359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIIS---RLRHRNLVQLLGWCHEKKELLLVYEFMP  432 (645)
Q Consensus       359 ~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~---~l~H~nlv~l~~~~~~~~~~~lV~Ey~~  432 (645)
                      .||+|+||.||++....+++.+|+|.+....   ......+.+|..++.   ..+|+|++.+++++..++..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4899999999999999889999999886532   122233445544433   3479999999999999999999999999


Q ss_pred             CCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCccee
Q 042831          433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT  512 (645)
Q Consensus       433 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~  512 (645)
                      +++|.+++... ..+++.....++.|++.||.|||+   .+++||||||+|||+++++.++|+|||++.......   ..
T Consensus        81 ~~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---~~  153 (279)
T cd05633          81 GGDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PH  153 (279)
T ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC---cc
Confidence            99999888643 469999999999999999999998   899999999999999999999999999987543221   22


Q ss_pred             ecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          513 VLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       513 ~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ...|+..|+|||.+.+ ..++.++|||||||+++||++|+.||..........+..    ..      ...+..+.    
T Consensus       154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~----~~------~~~~~~~~----  219 (279)
T cd05633         154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR----MT------LTVNVELP----  219 (279)
T ss_pred             CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHH----Hh------hcCCcCCc----
Confidence            3468999999998864 457899999999999999999999997544322211111    10      00111121    


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccCC
Q 042831          592 GQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFEA  627 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~~  627 (645)
                      ......+.+++..|++.||++||     +++|+++|.++..
T Consensus       220 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~  260 (279)
T cd05633         220 DSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG  260 (279)
T ss_pred             cccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence            12234667788999999999999     6999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.6e-36  Score=305.90  Aligned_cols=253  Identities=25%  Similarity=0.408  Sum_probs=205.8

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcC---CCCccEEEeeeeeCCeEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLR---HRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~---H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      .|+..+.||+|+||.||+|.+..+++.+|+|.+... ......++.+|+.++++++   |||++++++++..+...++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            467788999999999999999888999999998654 3445677889999999997   999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++++|.+++..  ..+++.....++.|++.||.|||+   .+++|+||+|+||++++++.++|+|||++....... 
T Consensus        82 e~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-  155 (277)
T cd06917          82 EYAEGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS-  155 (277)
T ss_pred             ecCCCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-
Confidence            99999999998844  378999999999999999999998   899999999999999999999999999998665433 


Q ss_pred             cceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          509 SQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      .......|+..|+|||.+.++ .++.++|+|||||++|||++|+.||.......      +.. ....     ...+.+.
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~------~~~-~~~~-----~~~~~~~  223 (277)
T cd06917         156 SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR------AMM-LIPK-----SKPPRLE  223 (277)
T ss_pred             cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh------hhh-cccc-----CCCCCCC
Confidence            222334688899999988764 46899999999999999999999997543211      110 0001     1112222


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..   .....+.+++.+|++.||++||++.+++.+.+..
T Consensus       224 ~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~  259 (277)
T cd06917         224 DN---GYSKLLREFVAACLDEEPKERLSAEELLKSKWIK  259 (277)
T ss_pred             cc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhh
Confidence            11   1234677888999999999999999999998864

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.5e-36  Score=305.44  Aligned_cols=257  Identities=27%  Similarity=0.388  Sum_probs=204.7

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCC-----
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKK-----  422 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~-----  422 (645)
                      .++++|+..+.||+|++|.||+|....+++.+++|.+..... ..+++.+|++++.++ +|+|++++++++....     
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            356889999999999999999999988889999999875543 346789999999999 6999999999997644     


Q ss_pred             -eEEEEEEecCCCChhhhhhhc---CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeecc
Q 042831          423 -ELLLVYEFMPNGSLDSHLFKE---NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG  498 (645)
Q Consensus       423 -~~~lV~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfG  498 (645)
                       ..++||||+++++|.+++...   +..+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~  158 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFG  158 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCc
Confidence             489999999999999988642   4678999999999999999999998   899999999999999999999999999


Q ss_pred             CcccccccCCcceeecccCccccCcccccc-----CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHh
Q 042831          499 LARLVEHAKGSQTTVLAGTMGYMAPECATT-----GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY  573 (645)
Q Consensus       499 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~  573 (645)
                      ++....... .......++..|+|||.+..     ..++.++|||||||+++||++|+.||......  ..+.    .. 
T Consensus       159 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~----~~-  230 (275)
T cd06608         159 VSAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM--RALF----KI-  230 (275)
T ss_pred             cceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH--HHHH----Hh-
Confidence            987553322 22233568889999998753     34678999999999999999999999743221  1111    11 


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ..+     ..+.+.  ......+.+.+++.+||..||++|||+.|++++.|
T Consensus       231 ~~~-----~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~  274 (275)
T cd06608         231 PRN-----PPPTLK--SPENWSKKFNDFISECLIKNYEQRPFMEELLEHPF  274 (275)
T ss_pred             hcc-----CCCCCC--chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCC
Confidence            111     111111  11123456778899999999999999999998765

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=1.1e-35  Score=305.84  Aligned_cols=252  Identities=24%  Similarity=0.407  Sum_probs=205.4

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      -|...+.||+|+||.||+|.+..++..+|+|...... ....+.+.+|++++.+++|||++++++++..++..++||||+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            3667788999999999999998889999999886442 344567889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++++|.+++..  ..+++..+..++.|++.+|.|||+   .+++|+||+|+||+++.++.++|+|||++....... ...
T Consensus        85 ~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-~~~  158 (277)
T cd06641          85 GGGSALDLLEP--GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKR  158 (277)
T ss_pred             CCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccch-hhh
Confidence            99999988843  468999999999999999999998   999999999999999999999999999987654322 122


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ....++..|+|||.+.+...+.++|+|||||+++||++|+.||......      .+.... ..+.     .+.+..   
T Consensus       159 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~------~~~~~~-~~~~-----~~~~~~---  223 (277)
T cd06641         159 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM------KVLFLI-PKNN-----PPTLEG---  223 (277)
T ss_pred             ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH------HHHHHH-hcCC-----CCCCCc---
Confidence            2346788999999998888999999999999999999999999643321      111111 1111     111212   


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          592 GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                       .....+.+++.+|++.+|++||++.+++++.++.
T Consensus       224 -~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~  257 (277)
T cd06641         224 -NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIV  257 (277)
T ss_pred             -ccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHh
Confidence             2234567788999999999999999999987764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=4.4e-36  Score=313.32  Aligned_cols=267  Identities=26%  Similarity=0.321  Sum_probs=201.9

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC-------
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK-------  422 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~-------  422 (645)
                      ++|+..++||+|+||.||+|....+++.||||.+....  ......+.+|++++++++|||+++++++|...+       
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            46888999999999999999999999999999886442  223345678999999999999999999987543       


Q ss_pred             -eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          423 -ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       423 -~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                       ..++||||+. ++|.+.+......+++..++.++.||++||.|||+   .+++|+||||+||+++.++.+||+|||++.
T Consensus        92 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~  167 (310)
T cd07865          92 GSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADFGLAR  167 (310)
T ss_pred             ceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence             4599999996 57888876665678999999999999999999998   899999999999999999999999999998


Q ss_pred             cccccCCc---ceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCc
Q 042831          502 LVEHAKGS---QTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK  577 (645)
Q Consensus       502 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~  577 (645)
                      ........   ......++..|+|||.+.+. .++.++||||||++++||++|+.||...........+..+......+.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (310)
T cd07865         168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEV  247 (310)
T ss_pred             cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence            66432221   12234567889999987664 378899999999999999999999976543222222221110000000


Q ss_pred             c-----cc-------------ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          578 L-----LE-------------AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       578 l-----~~-------------~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .     .+             .+...+...   .+...+.+++.+||+.||++|||++|++++.|+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         248 WPGVDKLELFKKMELPQGQKRKVKERLKPY---VKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             cccccchhhhhhccCCCccchhhHHhcccc---cCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            0     00             000000000   012356689999999999999999999998774

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=5.4e-36  Score=308.93  Aligned_cols=264  Identities=24%  Similarity=0.310  Sum_probs=201.9

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +|+..+.||+|++|.||+|++..+++.||||++....  ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            4778899999999999999999889999999886542  23345788999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      +. ++|.+++... ...+++..+..++.|++.||+|||+   .+++|+||+|+||+++.++.+||+|||+++....... 
T Consensus        81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~-  155 (284)
T cd07860          81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-  155 (284)
T ss_pred             cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc-
Confidence            95 6888888643 4678999999999999999999998   8999999999999999999999999999876543221 


Q ss_pred             ceeecccCccccCccccccCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC------------
Q 042831          510 QTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG------------  576 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~-~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~------------  576 (645)
                      ......++..|+|||++.+.. ++.++||||||+++|||++|+.||.......  .+.+.. ...+..            
T Consensus       156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~  232 (284)
T cd07860         156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIF-RTLGTPDEVVWPGVTSLP  232 (284)
T ss_pred             ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHH-HHhCCCChhhhhhhhHHH
Confidence            222335678899999887654 6889999999999999999999997543211  111111 000000            


Q ss_pred             ----ccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          577 ----KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       577 ----~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                          .........+.. ........+.+++.+|++.||++||++++++++.++
T Consensus       233 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         233 DYKPSFPKWARQDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             HHHhhcccccccCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence                000000000000 000112346678999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=2.1e-35  Score=310.15  Aligned_cols=254  Identities=28%  Similarity=0.399  Sum_probs=204.7

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      |...+.||+|+||.||+++...++..+|+|++...   ..+..+++.+|++++++++|+|++++++++..++..++||||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            66678899999999999999888999999998643   233456788999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      ++ |+|.+.+......+++.++..++.|++.||.|||+   .+++||||+|+||+++.++.+||+|||++.....     
T Consensus       107 ~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-----  177 (317)
T cd06635         107 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASP-----  177 (317)
T ss_pred             CC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCC-----
Confidence            96 57877776666779999999999999999999998   8999999999999999999999999999865432     


Q ss_pred             eeecccCccccCccccc---cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          511 TTVLAGTMGYMAPECAT---TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~---~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      .....++..|+|||++.   .+.++.++|||||||++|||++|+.||......   ...   ......+.      +.. 
T Consensus       178 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~---~~~---~~~~~~~~------~~~-  244 (317)
T cd06635         178 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SAL---YHIAQNES------PTL-  244 (317)
T ss_pred             cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH---HHH---HHHHhccC------CCC-
Confidence            12345788999999873   456899999999999999999999998653211   111   11111110      111 


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCCC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPA  631 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p~  631 (645)
                        ........+.+++.+|++.+|++||++.+++++++.....|.
T Consensus       245 --~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~  286 (317)
T cd06635         245 --QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPE  286 (317)
T ss_pred             --CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcc
Confidence              011233457788899999999999999999999987655444

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=5.7e-36  Score=308.42  Aligned_cols=256  Identities=27%  Similarity=0.366  Sum_probs=199.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHH-HHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKI-ISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~-l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ++|+..+.||+|+||.||++++..+|+.||+|++.... .+...++..|+.. ++.++|||++++++++..++..++|||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            46888899999999999999999999999999987542 2334566667665 556689999999999999999999999


Q ss_pred             ecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCC-CeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          430 FMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQ-CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       430 y~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      |++ |+|.+++..   .+..+++..++.++.||+.||.|||+   + +++||||||+||+++.++.+||+|||+++....
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~  156 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD  156 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence            995 788777753   34578999999999999999999998   5 899999999999999999999999999876532


Q ss_pred             cCCcceeecccCccccCcccccc----CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATT----GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA  581 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~----~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~  581 (645)
                      ..  ......++..|+|||.+..    ..++.++|+|||||++|||++|+.||......  .   +...... .+     
T Consensus       157 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~---~~~~~~~-~~-----  223 (283)
T cd06617         157 SV--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP--F---QQLKQVV-EE-----  223 (283)
T ss_pred             cc--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC--H---HHHHHHH-hc-----
Confidence            21  1223457889999998754    44688999999999999999999999643221  1   1111111 11     


Q ss_pred             cCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       582 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ..+.+..   ....+.+..++.+||+.+|++||++++++++.++..
T Consensus       224 ~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~  266 (283)
T cd06617         224 PSPQLPA---EKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFEL  266 (283)
T ss_pred             CCCCCCc---cccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhh
Confidence            1111110   012345778889999999999999999999988764

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=7e-36  Score=310.89  Aligned_cols=268  Identities=25%  Similarity=0.328  Sum_probs=204.5

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC----
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK----  422 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~----  422 (645)
                      ...++|+..+.||+|+||.||+|.+..+++.||+|.++...  ......+.+|++++++++|||++++++++.+..    
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            35678899999999999999999999889999999987543  233456778999999999999999999987654    


Q ss_pred             ------eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEee
Q 042831          423 ------ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD  496 (645)
Q Consensus       423 ------~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~D  496 (645)
                            ..++|+||+++ +|...+......+++..+..++.|++.||+|||+   .+|+|+||||+||++++++.+||+|
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl~d  159 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKLAD  159 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEeCc
Confidence                  78999999976 6777776555679999999999999999999998   8999999999999999999999999


Q ss_pred             ccCcccccccCCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC
Q 042831          497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN  575 (645)
Q Consensus       497 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~  575 (645)
                      ||++...............++..|+|||.+.+. ..+.++|||||||+++||++|+.||......   .....+......
T Consensus       160 fg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~---~~~~~~~~~~~~  236 (302)
T cd07864         160 FGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL---AQLELISRLCGS  236 (302)
T ss_pred             ccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCC
Confidence            999986654332222233467789999987653 5789999999999999999999999754322   111112221111


Q ss_pred             Cc---cccc--------cCc------cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          576 GK---LLEA--------VDP------RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       576 ~~---l~~~--------~d~------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ..   ....        .++      ....... .....+.+++..||+.||++||++++++++.+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~  301 (302)
T cd07864         237 PCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFS-FIPTPALDLLDHMLTLDPSKRCTAEEALNSPW  301 (302)
T ss_pred             CChhhcccccccccccccccccccccchhhhcC-CCCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            00   0000        000      0000000 11356788899999999999999999998765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=2e-35  Score=315.05  Aligned_cols=267  Identities=21%  Similarity=0.244  Sum_probs=204.9

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC------
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK------  421 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~------  421 (645)
                      ..++|...+.||+|+||.||++++..+++.||+|.+...  ......++.+|+.++.+++|+|++++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            457899999999999999999999989999999998643  334456778899999999999999999988643      


Q ss_pred             CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          422 KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      ...++||||+. ++|.+.+...   +++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++
T Consensus        94 ~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~  166 (353)
T cd07850          94 QDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  166 (353)
T ss_pred             CcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCccce
Confidence            35799999995 5787776432   8899999999999999999998   899999999999999999999999999998


Q ss_pred             cccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc-------
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG-------  574 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~-------  574 (645)
                      ......  ......++..|+|||.+.+..++.++|||||||++++|++|+.||...+...   ....+....+       
T Consensus       167 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~  241 (353)
T cd07850         167 TAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHID---QWNKIIEQLGTPSDEFM  241 (353)
T ss_pred             eCCCCC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHH---HHHHHHHhcCCCCHHHH
Confidence            654321  1233457889999999999899999999999999999999999997543211   1111110000       


Q ss_pred             ------------CCc------cccccCccc----cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          575 ------------NGK------LLEAVDPRL----CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       575 ------------~~~------l~~~~d~~l----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                                  +..      +.+.....+    ...........+.+++.+||+.||++|||+.|++++.+....
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~  317 (353)
T cd07850         242 SRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVW  317 (353)
T ss_pred             HHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhc
Confidence                        000      000111100    000011234567789999999999999999999999976543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=2.3e-35  Score=307.89  Aligned_cols=256  Identities=21%  Similarity=0.275  Sum_probs=203.4

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|+||.||++.+..+++.|++|.+....   ......+.+|++++..++||||+++++.+..++..++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            46888899999999999999999999999999986543   234567889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++++|.+++... ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.......
T Consensus        81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~  156 (305)
T cd05609          81 EYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT  156 (305)
T ss_pred             ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence            999999999998554 568999999999999999999998   8999999999999999999999999999874211100


Q ss_pred             --------------cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc
Q 042831          509 --------------SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG  574 (645)
Q Consensus       509 --------------~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~  574 (645)
                                    .......++..|+|||.+....++.++|+|||||++|||++|+.||......   .+.    ....
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~---~~~----~~~~  229 (305)
T cd05609         157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE---ELF----GQVI  229 (305)
T ss_pred             ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHH----HHHH
Confidence                          0111235788999999998888999999999999999999999999743321   111    1111


Q ss_pred             CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHhcc
Q 042831          575 NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPS---IRQVIHVLNF  625 (645)
Q Consensus       575 ~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~evl~~L~~  625 (645)
                      .+..   ..+....    .....+..++.+|++.||++||+   +.+++++.++
T Consensus       230 ~~~~---~~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~  276 (305)
T cd05609         230 SDDI---EWPEGDE----ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFF  276 (305)
T ss_pred             hccc---CCCCccc----cCCHHHHHHHHHHhccChhhccCccCHHHHHhCccc
Confidence            1111   0111111    12235678889999999999998   6777777765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=6.9e-36  Score=302.97  Aligned_cols=252  Identities=23%  Similarity=0.368  Sum_probs=204.9

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +|...+.||+|+||.||+|..+.+|..+|+|.+...  .....+.+.+|++++++++|+|++++++.+......++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            467788999999999999999999999999998653  223456788999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC-cEEEeeccCcccccccCC
Q 042831          431 MPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF-NAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       431 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~-~~kl~DfGla~~~~~~~~  508 (645)
                      +++++|.+++... ...+++..+..++.|+++||.|||+   .+++|+||||+||++++++ .+||+|||.+....... 
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-  156 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM-  156 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence            9999999998654 3468999999999999999999998   8999999999999999875 46999999987654322 


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      .......|+..|+|||++....++.++|+||||++++||++|+.||.....      .+++.... .+....     ...
T Consensus       157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~-~~~~~~-----~~~  224 (257)
T cd08225         157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL------HQLVLKIC-QGYFAP-----ISP  224 (257)
T ss_pred             ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHh-cccCCC-----CCC
Confidence            122334588899999999888899999999999999999999999964322      12222221 111111     111


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                          .....+.+++.+|++.+|++|||+.+++++.+
T Consensus       225 ----~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~  256 (257)
T cd08225         225 ----NFSRDLRSLISQLFKVSPRDRPSITSILKRPF  256 (257)
T ss_pred             ----CCCHHHHHHHHHHhccChhhCcCHHHHhhCCC
Confidence                12245778889999999999999999999866

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.3e-36  Score=303.52  Aligned_cols=274  Identities=26%  Similarity=0.359  Sum_probs=209.9

Q ss_pred             ChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHh--cCCCCccEEEeeeee
Q 042831          343 PYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISR--LRHRNLVQLLGWCHE  420 (645)
Q Consensus       343 ~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nlv~l~~~~~~  420 (645)
                      ++---+....+....+.||+|.||.||+|.++  |+.||||++....+   +.+.+|.++.+.  |||+||+.+++.-..
T Consensus       202 plLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~  276 (513)
T KOG2052|consen  202 PLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNK  276 (513)
T ss_pred             hhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhcccc
Confidence            33334455567888999999999999999998  67899999975543   456677777765  699999999987543


Q ss_pred             C----CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhc-----CCCeeeccCCCCCeEECCCCc
Q 042831          421 K----KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW-----EQCVVHRDIKSSNIMLDSNFN  491 (645)
Q Consensus       421 ~----~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~Dlkp~NILld~~~~  491 (645)
                      +    .+++||.+|.++|||.++|..  ..++.+..++++.-+|.||++||.+.     ++.|.|||||+.|||+..++.
T Consensus       277 ~~gs~TQLwLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~  354 (513)
T KOG2052|consen  277 DNGSWTQLWLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT  354 (513)
T ss_pred             CCCceEEEEEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCc
Confidence            3    378999999999999999954  67899999999999999999999753     567999999999999999999


Q ss_pred             EEEeeccCcccccccCCc---ceeecccCccccCccccccC------CCCcchhHHHHHHHHHHHHcC----------CC
Q 042831          492 AKIGDFGLARLVEHAKGS---QTTVLAGTMGYMAPECATTG------KASKESDVYSFGIVALEIACG----------RK  552 (645)
Q Consensus       492 ~kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~t~~sDV~SfGvll~elltG----------~~  552 (645)
                      +.|+|+|||.......+.   .....+||.+|||||++...      +.-..+||||||.++||++..          +.
T Consensus       355 C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~  434 (513)
T KOG2052|consen  355 CCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQL  434 (513)
T ss_pred             EEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcC
Confidence            999999999866544322   23457899999999998653      224579999999999999752          35


Q ss_pred             CCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          553 PINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       553 pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      ||.+..+.+..  .+-+.+..--.++...++++.   .+.+.+..+.+++..||+.+|..|-|+-.+-+.|..-..
T Consensus       435 Pyyd~Vp~DPs--~eeMrkVVCv~~~RP~ipnrW---~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  435 PYYDVVPSDPS--FEEMRKVVCVQKLRPNIPNRW---KSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             CcccCCCCCCC--HHHHhcceeecccCCCCCccc---ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            66654433221  111222222233443444333   345788899999999999999999999999888875443

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=1.8e-35  Score=304.45  Aligned_cols=262  Identities=23%  Similarity=0.247  Sum_probs=200.3

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeC--CeEEEEEE
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLR-HRNLVQLLGWCHEK--KELLLVYE  429 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~--~~~~lV~E  429 (645)
                      |...++||+|+||.||+|....++..||+|+++... ........+|+.++.++. |+|++++++++.+.  +..++|+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            456788999999999999999889999999987542 222334557899999985 99999999999887  88999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |++ ++|.+.+......+++..+..++.|++.||.|||+   .+++||||+|+||+++. +.+||+|||+++....... 
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~-  154 (282)
T cd07831          81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP-  154 (282)
T ss_pred             cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccccCCC-
Confidence            996 58888886656679999999999999999999998   89999999999999999 9999999999986543221 


Q ss_pred             ceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc-----------CCc
Q 042831          510 QTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG-----------NGK  577 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~-----------~~~  577 (645)
                       .....++..|+|||++.. +.++.++|||||||++|||++|+.||......   ..+.+..+...           ...
T Consensus       155 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  230 (282)
T cd07831         155 -YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL---DQIAKIHDVLGTPDAEVLKKFRKSR  230 (282)
T ss_pred             -cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH---HHHHHHHHHcCCCCHHHHHhhcccc
Confidence             223457889999997654 45789999999999999999999999754432   12222221111           011


Q ss_pred             cccccCccccC----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          578 LLEAVDPRLCR----DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       578 l~~~~d~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ......+....    .........+.+++.+||+++|++||++++++++.++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            11110111000    0011234678899999999999999999999998763

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=6.4e-36  Score=303.92  Aligned_cols=252  Identities=25%  Similarity=0.290  Sum_probs=207.2

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      +|...++||+|+||.||++.+..+++.||+|.+...   .....+.+.+|++++++++|||++++++.+.++...++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            477889999999999999999988999999998653   22456789999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+++++|.+++... ..+++.....++.|+++||.|||+   .+++|+||+|+||++++++.++|+|||++.......  
T Consensus        81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--  154 (258)
T cd05578          81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT--  154 (258)
T ss_pred             CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--
Confidence            99999999998654 578999999999999999999998   899999999999999999999999999987654322  


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      ......++..|+|||.+.+...+.++|+||||+++|+|++|+.||.......    .++.......  ..    +    .
T Consensus       155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~--~~----~----~  220 (258)
T cd05578         155 LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI----RDQIRAKQET--AD----V----L  220 (258)
T ss_pred             cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH----HHHHHHHhcc--cc----c----c
Confidence            2234567889999999988889999999999999999999999998654321    1111111111  00    1    1


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHhc
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSI--RQVIHVLN  624 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~--~evl~~L~  624 (645)
                      .+......+.+++.+|++.||.+||++  +|++++.+
T Consensus       221 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~  257 (258)
T cd05578         221 YPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPY  257 (258)
T ss_pred             CcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCC
Confidence            111223567788899999999999999  88887654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=1.1e-35  Score=301.68  Aligned_cols=247  Identities=28%  Similarity=0.448  Sum_probs=197.9

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|...+.||+|+||.||++..  +++.||+|.++...  ....+.+|+.++.+++|||++++++++... ..++||||+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~   80 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM   80 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence            4578889999999999999975  46789999986543  345788999999999999999999998654 479999999


Q ss_pred             CCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          432 PNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       432 ~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      ++++|.+++... ...+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++.......   
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~---  154 (254)
T cd05083          81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV---  154 (254)
T ss_pred             CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccC---
Confidence            999999999754 3468999999999999999999998   899999999999999999999999999987543211   


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                       .....+..|+|||.+.++.++.++|+||||+++|||++ |+.||......   ..    ......+...   ++  .. 
T Consensus       155 -~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~~----~~~~~~~~~~---~~--~~-  220 (254)
T cd05083         155 -DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK---EV----KECVEKGYRM---EP--PE-  220 (254)
T ss_pred             -CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH---HH----HHHHhCCCCC---CC--CC-
Confidence             11234567999999988899999999999999999997 99999754321   11    1111222111   11  11 


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                         .....+.+++.+|++.+|++||+++++++.|+.+
T Consensus       221 ---~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  254 (254)
T cd05083         221 ---GCPADVYVLMTSCWETEPKKRPSFHKLREKLEKE  254 (254)
T ss_pred             ---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHccC
Confidence               1235667889999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=7.7e-35  Score=298.13  Aligned_cols=252  Identities=23%  Similarity=0.366  Sum_probs=190.9

Q ss_pred             CccCcCCcEEEEEEEEcCC--CeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCC
Q 042831          358 QKLGQGGFGGVYKGFFRET--NSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNG  434 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~--~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~g  434 (645)
                      ++||+|+||.||+|....+  ...+++|.+.... ....+.+.+|+.+++.++||||+++++.|......++||||+++|
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   80 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG   80 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence            3699999999999976433  3456777776543 345678999999999999999999999999999999999999999


Q ss_pred             Chhhhhhhc---CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC-cc
Q 042831          435 SLDSHLFKE---NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-SQ  510 (645)
Q Consensus       435 sL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~-~~  510 (645)
                      +|.+++.+.   ....++.....++.||++||.|||+   .+++||||||+|||++.++.+||+|||++........ ..
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  157 (268)
T cd05086          81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET  157 (268)
T ss_pred             cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence            999999753   2346777888999999999999998   8999999999999999999999999999864321111 11


Q ss_pred             eeecccCccccCcccccc-------CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          511 TTVLAGTMGYMAPECATT-------GKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~-------~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      .....++..|+|||++..       ..++.++|||||||++|||++ |..||......   .....   .. .+......
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~---~~~~~---~~-~~~~~~~~  230 (268)
T cd05086         158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR---EVLNH---VI-KDQQVKLF  230 (268)
T ss_pred             ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH---HH-hhcccccC
Confidence            223457889999998743       235789999999999999997 56787643321   11111   11 22223334


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ++.+...++    ..+.+++..|+ .+|++||+++||++.|.
T Consensus       231 ~~~~~~~~~----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         231 KPQLELPYS----ERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CCccCCCCc----HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            455444333    34555667898 67999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=2.7e-35  Score=304.29  Aligned_cols=259  Identities=26%  Similarity=0.371  Sum_probs=211.2

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .++.|+..+.||+|++|.||+|.+..++..+++|.+..... ..+.+.+|++++.+++|+|++++++.+...+..++|+|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            45678888999999999999999988889999999976554 56788899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+++++|.+++......+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++........ 
T Consensus        96 ~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-  171 (286)
T cd06614          96 YMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS-  171 (286)
T ss_pred             ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh-
Confidence            999999999997655579999999999999999999998   9999999999999999999999999999865433221 


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      ......++..|++||.+.+..++.++|+||||+++|||++|+.||.......   ...   . ..........++     
T Consensus       172 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~---~~~---~-~~~~~~~~~~~~-----  239 (286)
T cd06614         172 KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR---ALF---L-ITTKGIPPLKNP-----  239 (286)
T ss_pred             hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH---HHH---H-HHhcCCCCCcch-----
Confidence            2223457889999999988889999999999999999999999997433211   111   1 111111110000     


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                        ......+..++.+|++.+|.+||++.+++++.+...
T Consensus       240 --~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  275 (286)
T cd06614         240 --EKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK  275 (286)
T ss_pred             --hhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence              112245778889999999999999999999887653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=2.3e-35  Score=304.08  Aligned_cols=265  Identities=23%  Similarity=0.318  Sum_probs=203.5

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      +|+..++||+|++|.||+|++..+|+.||+|+++.... .....+.+|++++++++|+|++++++++...+..++||||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            47788999999999999999998999999999876533 23466778999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcC--CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          432 PNGSLDSHLFKEN--SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       432 ~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      ++ +|.+++....  ..+++..+..++.|+++||.|||+   .+++||||||+||++++++.+||+|||++........ 
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~-  155 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN-  155 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence            75 8888876543  568999999999999999999998   8999999999999999999999999999975543211 


Q ss_pred             ceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHH-----------hcCC-
Q 042831          510 QTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDL-----------YGNG-  576 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~-----------~~~~-  576 (645)
                      ......++..|++||++.+. .++.++||||||+++|||++|+.||......+.   .....+.           +... 
T Consensus       156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
T cd07836         156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ---LLKIFRIMGTPTESTWPGISQLP  232 (284)
T ss_pred             ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH---HHHHHHHhCCCChhhHHHHhcCc
Confidence            12234568889999988664 478999999999999999999999976543221   1111111           1000 


Q ss_pred             ccccccCccc---cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          577 KLLEAVDPRL---CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       577 ~l~~~~d~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..........   ...........+.+++.+|++.||++||++.|++++.++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         233 EYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             hhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            0000000000   000011123557788999999999999999999988654

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=3.7e-35  Score=296.78  Aligned_cols=255  Identities=27%  Similarity=0.435  Sum_probs=209.9

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC--CeEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KELLLVY  428 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~--~~~~lV~  428 (645)
                      +|...+.||+|++|.||+|....+++.|++|.+....  ....+.+.+|++++++++|+|++++++.+...  +..++|+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            4677889999999999999999889999999987654  35677899999999999999999999999988  8999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++++|.+++.+.. .+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||.+........
T Consensus        81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  156 (260)
T cd06606          81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET  156 (260)
T ss_pred             EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence            9999999999986544 88999999999999999999998   8999999999999999999999999999886654332


Q ss_pred             c-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          509 S-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       509 ~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      . ......++..|++||.+.....+.++||||||++++||++|+.||.....     .....+.....+         ..
T Consensus       157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~---------~~  222 (260)
T cd06606         157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN-----PMAALYKIGSSG---------EP  222 (260)
T ss_pred             cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-----hHHHHHhccccC---------CC
Confidence            1 12345688899999999888899999999999999999999999975441     111111111101         11


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ...+......+.+++.+|++.+|++||++.+++++.++
T Consensus       223 ~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         223 PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence            11222224577888899999999999999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-35  Score=304.88  Aligned_cols=264  Identities=23%  Similarity=0.286  Sum_probs=201.3

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      |+..++||.|++|.||+|.+..+|..||+|++....  ......+.+|++++++++|+|++++++++.+.+..+++|||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            566789999999999999999889999999986543  233467889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          432 PNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       432 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                       +++|.+++.... ..+++..+..++.|+++||.|||+   .+++|+||+|+||+++.++.++|+|||+++....... .
T Consensus        81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-~  155 (283)
T cd07835          81 -DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR-T  155 (283)
T ss_pred             -CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-c
Confidence             468998886543 468999999999999999999998   8999999999999999999999999999976543221 1


Q ss_pred             eeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC-------------
Q 042831          511 TTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG-------------  576 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~-------------  576 (645)
                      .....++..|+|||++.+. .++.++||||||+++|||++|+.||.......  .+...........             
T Consensus       156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (283)
T cd07835         156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID--QLFRIFRTLGTPDEDVWPGVTSLPDY  233 (283)
T ss_pred             cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChHHhhhhhhchhh
Confidence            1223468889999987664 47899999999999999999999997543211  1111111000000             


Q ss_pred             --ccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          577 --KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       577 --~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                        .......+.. ..........+.+++.+|+++||++|||++|++++.|+
T Consensus       234 ~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         234 KPTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             hhhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence              0000000000 00011122467789999999999999999999988664

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-35  Score=304.47  Aligned_cols=255  Identities=21%  Similarity=0.309  Sum_probs=219.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .-|...+.||+|-|..|-++++.-+|+.||||++.+..  .-...++.+|+..|+-++|||||+|+++......+|||.|
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            45777889999999999999999999999999997653  3345678899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE-CCCCcEEEeeccCcccccccCC
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl-d~~~~~kl~DfGla~~~~~~~~  508 (645)
                      +=.+|+|.+|+.++..-+.+....+++.||..|+.|+|+   ..+|||||||+||.+ ..-|-+||+|||++..+..+  
T Consensus        98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG--  172 (864)
T KOG4717|consen   98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG--  172 (864)
T ss_pred             ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCCCc--
Confidence            999999999999988889999999999999999999999   889999999999876 56788999999999876543  


Q ss_pred             cceeecccCccccCccccccCCCC-cchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          509 SQTTVLAGTMGYMAPECATTGKAS-KESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t-~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      .+....+|...|-|||++.+..|+ ++.|||||||+||-|+||+.||+..++.+.               +..++|-.. 
T Consensus       173 ~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET---------------LTmImDCKY-  236 (864)
T KOG4717|consen  173 KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET---------------LTMIMDCKY-  236 (864)
T ss_pred             chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh---------------hhhhhcccc-
Confidence            345567899999999999988875 688999999999999999999987665432               233345433 


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                       ..+.....++.+|+..||..||++|-+.+|++.+-|-.+-
T Consensus       237 -tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~  276 (864)
T KOG4717|consen  237 -TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAG  276 (864)
T ss_pred             -cCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCC
Confidence             2344567788899999999999999999999999986543

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=1.8e-35  Score=305.72  Aligned_cols=259  Identities=28%  Similarity=0.396  Sum_probs=201.9

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeEEEEEEe
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +|...+.||+|+||.||++.+..+++.+|+|.+.... ......+.+|+.++.++. |+||+++++++..++..+++|||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            4555778999999999999999999999999987543 345567889999999996 99999999999999999999999


Q ss_pred             cCCCChhhhh---hh-cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          431 MPNGSLDSHL---FK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       431 ~~~gsL~~~l---~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ++ ++|.++.   .. ....+++.....++.|++.||.|||+  ..+++||||||+||+++.++.+||+|||+++.....
T Consensus        85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  161 (288)
T cd06616          85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS  161 (288)
T ss_pred             cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence            85 4554433   22 24678999999999999999999997  258999999999999999999999999998754322


Q ss_pred             CCcceeecccCccccCccccccC---CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          507 KGSQTTVLAGTMGYMAPECATTG---KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~---~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      .  ......|+..|+|||.+.+.   .++.++|||||||++|||++|+.||....     ...+.+..... +     ..
T Consensus       162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~-~-----~~  228 (288)
T cd06616         162 I--AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQVVK-G-----DP  228 (288)
T ss_pred             C--ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhhcC-C-----CC
Confidence            1  12233578899999998776   68999999999999999999999996432     11111111111 1     11


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      +.+...........+.+++.+|++.+|++|||+++++++.++..
T Consensus       229 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  272 (288)
T cd06616         229 PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD  272 (288)
T ss_pred             CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence            22222221223456788899999999999999999999988753

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=2.3e-35  Score=305.91  Aligned_cols=266  Identities=21%  Similarity=0.250  Sum_probs=199.9

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCe-----
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKE-----  423 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~-----  423 (645)
                      ++|+..+.||+|+||.||+|.+..+++.||+|.++...  ......+.+|+.++.+++ |+|++++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            46888899999999999999999899999999876542  223467888999999995 6999999999877655     


Q ss_pred             EEEEEEecCCCChhhhhhhc----CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC-CCcEEEeecc
Q 042831          424 LLLVYEFMPNGSLDSHLFKE----NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-NFNAKIGDFG  498 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~-~~~~kl~DfG  498 (645)
                      .++||||+++ +|.+++...    ...+++..++.++.||+.||.|||+   ++++||||||+||+++. ++.+||+|||
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecc
Confidence            8999999975 788887543    2468999999999999999999998   89999999999999998 8999999999


Q ss_pred             CcccccccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCc
Q 042831          499 LARLVEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK  577 (645)
Q Consensus       499 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~  577 (645)
                      +++....... ......+++.|+|||++.+ ..++.++||||||+++|||++|+.||.......  .+ ..+........
T Consensus       157 ~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~--~~-~~~~~~~~~~~  232 (295)
T cd07837         157 LGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ--QL-LHIFKLLGTPT  232 (295)
T ss_pred             cceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH--HH-HHHHHHhCCCC
Confidence            9875533211 1222356788999998865 457899999999999999999999997543211  11 11111111000


Q ss_pred             c---------ccccC-cccc----CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          578 L---------LEAVD-PRLC----RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       578 l---------~~~~d-~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .         ..... +...    ..........+.+++..||++||++||+++|++.+.|+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~  294 (295)
T cd07837         233 EQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYF  294 (295)
T ss_pred             hhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCc
Confidence            0         00000 0000    00001123567789999999999999999999998775

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.8e-37  Score=317.75  Aligned_cols=249  Identities=26%  Similarity=0.377  Sum_probs=211.4

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh---hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK---QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .|...+.||.|.||.||.+++..+.+.||||+++...+   +.+.+++.|+..|.+++|||.+.+.|++..+...+||||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            46667889999999999999999999999999976543   456789999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      || -||-.+.+.-.++.+-+..+..|+.+.+.||+|||+   .+.||||||+.||||++.|.+||+|||.|.+...    
T Consensus       107 YC-lGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P----  178 (948)
T KOG0577|consen  107 YC-LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP----  178 (948)
T ss_pred             HH-hccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCc----
Confidence            99 678888887777889999999999999999999999   8999999999999999999999999999976543    


Q ss_pred             ceeecccCccccCcccc---ccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          510 QTTVLAGTMGYMAPECA---TTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~---~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                       ...++||+.|||||++   ..|+|+-++||||||++..||.-.++|+-..+.      +..++..      ...-.|.+
T Consensus       179 -AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA------MSALYHI------AQNesPtL  245 (948)
T KOG0577|consen  179 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHI------AQNESPTL  245 (948)
T ss_pred             -hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH------HHHHHHH------HhcCCCCC
Confidence             3457899999999987   457899999999999999999999999764331      1111111      11112333


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .   ..+....+..++-.||+.-|++|||.++++.|..-
T Consensus       246 q---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv  281 (948)
T KOG0577|consen  246 Q---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFV  281 (948)
T ss_pred             C---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchh
Confidence            3   34677888999999999999999999999998754

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=9.2e-37  Score=328.42  Aligned_cols=257  Identities=30%  Similarity=0.435  Sum_probs=211.0

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCC----eEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETN----SYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~----~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ....++||+|+||+||+|.+...|    .+||+|.+... +.+...++++|+.+|.+++||||++|+|+|.... +.||.
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt  776 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT  776 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence            345789999999999999986544    47899987654 5566789999999999999999999999998776 88999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      +||+.|+|.++++.++..+-....+.|..|||+||.|||+   +.++||||..+|||+..-..+||.|||++++......
T Consensus       777 q~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~  853 (1177)
T KOG1025|consen  777 QLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK  853 (1177)
T ss_pred             HhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence            9999999999999888889999999999999999999998   9999999999999999999999999999998765443


Q ss_pred             cce-eecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          509 SQT-TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       509 ~~~-~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                      .-. ....-.+.|||-|.+....++.++|||||||.+||++| |..|++....++..       ++++.|..+  --|.+
T Consensus       854 ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~-------dlle~geRL--sqPpi  924 (1177)
T KOG1025|consen  854 EYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIP-------DLLEKGERL--SQPPI  924 (1177)
T ss_pred             cccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhh-------HHHhccccC--CCCCC
Confidence            322 22233567999999999999999999999999999998 99999876544333       333334321  11222


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLP  630 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  630 (645)
                             ....+..++.+||..|++.||+++++......-+.-|
T Consensus       925 -------CtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp  961 (1177)
T KOG1025|consen  925 -------CTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP  961 (1177)
T ss_pred             -------ccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence                   3345667788999999999999999998876544333

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=5.2e-35  Score=295.88  Aligned_cols=252  Identities=25%  Similarity=0.390  Sum_probs=208.6

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +|...+.||+|++|.||++.+..++..+++|++....  ....+++.+|++++++++|+|++++.+.+...+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            4777889999999999999999889999999987653  35667889999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhc---CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          431 MPNGSLDSHLFKE---NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       431 ~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      +++++|.+++...   ...+++..+..++.++++||.|||+   .+++|+||+|+||+++.++.++|+|||++.......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence            9999999998764   4789999999999999999999998   899999999999999999999999999997654432


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                       .......+++.|+|||.+....++.++|+||+|+++++|++|+.||......      +..... .....     +.+.
T Consensus       158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~~~~~-~~~~~-----~~~~  224 (258)
T cd08215         158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL------ELALKI-LKGQY-----PPIP  224 (258)
T ss_pred             -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH------HHHHHH-hcCCC-----CCCC
Confidence             2233356888999999998888999999999999999999999999654321      111111 11111     1111


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .    .....+..++.+||+.+|++||++++++++.+
T Consensus       225 ~----~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~  257 (258)
T cd08215         225 S----QYSSELRNLVSSLLQKDPEERPSIAQILQSPF  257 (258)
T ss_pred             C----CCCHHHHHHHHHHcCCChhhCcCHHHHhcCCC
Confidence            1    22345678889999999999999999998765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=4.2e-35  Score=298.56  Aligned_cols=248  Identities=24%  Similarity=0.303  Sum_probs=203.1

Q ss_pred             cCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCCh
Q 042831          360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL  436 (645)
Q Consensus       360 LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL  436 (645)
                      ||.|++|.||++++..+++.+++|.+....   ....+.+.+|+.++++++|||++++++.+.+++..++|+||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            699999999999999889999999986532   23456799999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeeccc
Q 042831          437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG  516 (645)
Q Consensus       437 ~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~g  516 (645)
                      .+++.+. ..+++..+..++.|+++||.|||+   .+++|+||+|+||+++.++.+||+|||+++......  ......+
T Consensus        81 ~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~~  154 (262)
T cd05572          81 WTILRDR-GLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFCG  154 (262)
T ss_pred             HHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccccC
Confidence            9998653 458999999999999999999998   999999999999999999999999999998664332  2233467


Q ss_pred             CccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHH
Q 042831          517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIE  596 (645)
Q Consensus       517 t~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~  596 (645)
                      +..|++||.+....++.++|+||||+++|||++|+.||.....+ .....   .... .+..        ...++.....
T Consensus       155 ~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~---~~~~-~~~~--------~~~~~~~~~~  221 (262)
T cd05572         155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED-PMEIY---NDIL-KGNG--------KLEFPNYIDK  221 (262)
T ss_pred             CcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC-HHHHH---HHHh-ccCC--------CCCCCcccCH
Confidence            88999999998888999999999999999999999999765431 11111   1111 1100        1111111235


Q ss_pred             HHHHHHHHcCCCCCCCCCC-----HHHHHHHhccC
Q 042831          597 RLMIVGLWCAHPDENLRPS-----IRQVIHVLNFE  626 (645)
Q Consensus       597 ~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~~  626 (645)
                      .+..++..||+++|++||+     ++|++++.++.
T Consensus       222 ~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~  256 (262)
T cd05572         222 AAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFN  256 (262)
T ss_pred             HHHHHHHHHccCChhhCcCCcccCHHHHhcChhhh
Confidence            6788889999999999999     99999998875

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-35  Score=303.10  Aligned_cols=263  Identities=23%  Similarity=0.280  Sum_probs=205.3

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh--hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK--QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      |...+.||+|++|.||++....+++.+++|++.....  .....+..|++++++++|+|++++++++..++..++|+||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            4567889999999999999988899999999875432  34567889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++ +|..++......+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||.+....... ...
T Consensus        81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~~  155 (283)
T cd05118          81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RPY  155 (283)
T ss_pred             CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-ccc
Confidence            75 8888887666789999999999999999999998   899999999999999999999999999987664432 122


Q ss_pred             eecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC--c-cccccC----
Q 042831          512 TVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG--K-LLEAVD----  583 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~--~-l~~~~d----  583 (645)
                      ....++..|+|||.+.+. ..+.++|+||||+++++|++|+.||......+   ......+.....  . .....+    
T Consensus       156 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (283)
T cd05118         156 THYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID---QLFKIFRTLGTPDPEVWPKFTSLARN  232 (283)
T ss_pred             cCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCchHhcccchhhhhh
Confidence            234578889999998776 78999999999999999999999997544321   111111111110  0 000000    


Q ss_pred             --ccc-------cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          584 --PRL-------CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       584 --~~l-------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        ...       ...........+.+++..||++||.+||++++++.+.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~  282 (283)
T cd05118         233 YKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPY  282 (283)
T ss_pred             hhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCC
Confidence              000       00011123467889999999999999999999998876

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=2.3e-35  Score=306.09  Aligned_cols=267  Identities=23%  Similarity=0.298  Sum_probs=201.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ++|+..+.||+|++|.||+|.+..+++.||+|.+....  ....+.+.+|++++++++|+|++++++++...+..++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            46888899999999999999999889999999886542  2334678899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC-CCcEEEeeccCcccccccC
Q 042831          430 FMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       430 y~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~-~~~~kl~DfGla~~~~~~~  507 (645)
                      |++ ++|.+++... ...+++.....++.||+.||.|||+   ++++|+||+|+||+++. ++.+||+|||++.......
T Consensus        82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~  157 (294)
T PLN00009         82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV  157 (294)
T ss_pred             ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence            995 5787777543 3346888889999999999999998   89999999999999985 5679999999997653321


Q ss_pred             CcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCc---------
Q 042831          508 GSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK---------  577 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~---------  577 (645)
                       .......++..|+|||++.+. .++.++|||||||++|||++|+.||......+   .............         
T Consensus       158 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  233 (294)
T PLN00009        158 -RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID---ELFKIFRILGTPNEETWPGVTS  233 (294)
T ss_pred             -cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChhhcccccc
Confidence             112234568899999988664 57899999999999999999999997543321   1111111111100         


Q ss_pred             cccc--cCccccCC----CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          578 LLEA--VDPRLCRD----FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       578 l~~~--~d~~l~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      +.+.  .-+.....    ........+.+++.+|++.+|++||++.+++++.++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~  288 (294)
T PLN00009        234 LPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFK  288 (294)
T ss_pred             chhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHh
Confidence            0000  00000000    0011234577889999999999999999999998865

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-37  Score=298.14  Aligned_cols=251  Identities=25%  Similarity=0.374  Sum_probs=213.9

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      |.+.++||+|.||.||++.++++|+.+|||.+.-+  .+.+++..|+.+|.+.+.|++|+++|.+.....+++|||||..
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence            55678999999999999999999999999998654  3567899999999999999999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |+..+.+..+++.|++..+..|++.-++||+|||.   ..-+|||||+.||||+.+|.+||+|||.|..+... -.....
T Consensus       113 GSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT-MAKRNT  188 (502)
T KOG0574|consen  113 GSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT-MAKRNT  188 (502)
T ss_pred             CcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhh-HHhhCc
Confidence            99999998889999999999999999999999998   66799999999999999999999999998754321 223345


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      +.||+.|||||++..-.|..++||||+|+...||.-|++||.+..+-.-.-            -+.-.-.|.++  .+..
T Consensus       189 VIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF------------MIPT~PPPTF~--KPE~  254 (502)
T KOG0574|consen  189 VIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF------------MIPTKPPPTFK--KPEE  254 (502)
T ss_pred             cccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE------------eccCCCCCCCC--ChHh
Confidence            789999999999999999999999999999999999999998655421100            00011122222  2345


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          594 QIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ....+-+++..||-..|++|-|+-++++|..
T Consensus       255 WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~F  285 (502)
T KOG0574|consen  255 WSSEFNDFIRSCLIKKPEERKTALRLCEHTF  285 (502)
T ss_pred             hhhHHHHHHHHHhcCCHHHHHHHHHHhhhhh
Confidence            6678889999999999999999999999875

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.9e-35  Score=294.27  Aligned_cols=251  Identities=29%  Similarity=0.469  Sum_probs=206.5

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh--hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK--QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +|+..+.||+|++|.||+++...+++.|++|.+.....  .....+.+|++++.+++|+|++++++++...+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            46778999999999999999998899999999876543  5667899999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +++++|.+++... ..+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++......... 
T Consensus        81 ~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-  155 (254)
T cd06627          81 AENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD-  155 (254)
T ss_pred             CCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc-
Confidence            9999999988644 578999999999999999999998   89999999999999999999999999999866543321 


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      .....++..|+|||...+...+.++||||+|++++||++|+.||......      ...+.... ..     .+.+..  
T Consensus       156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~------~~~~~~~~-~~-----~~~~~~--  221 (254)
T cd06627         156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM------AALFRIVQ-DD-----HPPLPE--  221 (254)
T ss_pred             ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHhc-cC-----CCCCCC--
Confidence            23356788999999998888899999999999999999999999743311      11111111 10     011111  


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        .....+..++.+||+.+|++||++.+++.+-+
T Consensus       222 --~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~  253 (254)
T cd06627         222 --GISPELKDFLMQCFQKDPNLRPTAKQLLKHPW  253 (254)
T ss_pred             --CCCHHHHHHHHHHHhCChhhCcCHHHHhcCCC
Confidence              12346678889999999999999999997643

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-35  Score=313.73  Aligned_cols=267  Identities=22%  Similarity=0.298  Sum_probs=202.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC-----CeE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK-----KEL  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~-----~~~  424 (645)
                      +++|...++||+|+||.||+|++..+|+.||+|+++.. .......+.+|+.++.+++|+||+++++++...     ...
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            46899999999999999999999999999999998643 234456788999999999999999999987644     358


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++|+||++ ++|...+.  ...+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++...
T Consensus        84 ~lv~e~~~-~~l~~~~~--~~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~  157 (336)
T cd07849          84 YIVQELME-TDLYKLIK--TQHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD  157 (336)
T ss_pred             EEEehhcc-cCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence            99999996 47777663  3468999999999999999999998   899999999999999999999999999987654


Q ss_pred             ccCCc--ceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcc---
Q 042831          505 HAKGS--QTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL---  578 (645)
Q Consensus       505 ~~~~~--~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l---  578 (645)
                      .....  ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||......   .......+..+....   
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~---~~~~~~~~~~~~~~~~~~  234 (336)
T cd07849         158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL---HQLNLILGVLGTPSQEDL  234 (336)
T ss_pred             ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHcCCCCHHHH
Confidence            32211  1223467899999998654 46899999999999999999999999653321   111111121111100   


Q ss_pred             ccccCcc---------ccCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          579 LEAVDPR---------LCRDFD-----GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       579 ~~~~d~~---------l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ....+..         ......     ......+.+++.+||+.||++|||+.|++++.++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~  296 (336)
T cd07849         235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLE  296 (336)
T ss_pred             HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccc
Confidence            0000000         000000     01235678899999999999999999999998875

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=1.1e-34  Score=298.81  Aligned_cols=248  Identities=25%  Similarity=0.310  Sum_probs=194.3

Q ss_pred             ccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHH---HHHhcCCCCccEEEeeeeeCCeEEEEEEecC
Q 042831          359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVK---IISRLRHRNLVQLLGWCHEKKELLLVYEFMP  432 (645)
Q Consensus       359 ~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~---~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~  432 (645)
                      .||+|+||.||++....+++.||+|.+....   ......+..|..   .++...|||++++++++...+..++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            4899999999999998889999999986542   122223444443   3444579999999999999999999999999


Q ss_pred             CCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCccee
Q 042831          433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT  512 (645)
Q Consensus       433 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~  512 (645)
                      +++|..++.. ...+++..+..++.|+++||.|||+   .+++||||||+||+++.++.+||+|||++.......   ..
T Consensus        81 g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---~~  153 (278)
T cd05606          81 GGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PH  153 (278)
T ss_pred             CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---Cc
Confidence            9999988854 4579999999999999999999998   899999999999999999999999999987543221   22


Q ss_pred             ecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          513 VLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       513 ~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ...|+..|+|||.+.++ .++.++|||||||+++||++|+.||..........    ......      ..++.+...  
T Consensus       154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~------~~~~~~~~~--  221 (278)
T cd05606         154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE----IDRMTL------TMAVELPDS--  221 (278)
T ss_pred             CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH----HHHHhh------ccCCCCCCc--
Confidence            34689999999998755 58899999999999999999999997543322111    111110      011112111  


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccCC
Q 042831          592 GQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFEA  627 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~~  627 (645)
                        ....+.+++.+|++.+|++||     ++.+++++.++..
T Consensus       222 --~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~  260 (278)
T cd05606         222 --FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRS  260 (278)
T ss_pred             --CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccC
Confidence              234677888999999999999     9999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=6.5e-35  Score=295.44  Aligned_cols=249  Identities=29%  Similarity=0.414  Sum_probs=206.5

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +|+..++||+|++|.||++....+++.+++|.+...  ......++.+|++++++++|+||+++++++......++||||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            477789999999999999999988999999998653  334456788999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          431 MPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       431 ~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      +++++|.+++.+   ....+++..++.++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++...... 
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-  156 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-  156 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence            999999998865   23578999999999999999999998   89999999999999999999999999999876543 


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                        ......++..|++||.+.+..++.++|+||||++++||++|+.||......   .+..    ....+..         
T Consensus       157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~---~~~~----~~~~~~~---------  218 (256)
T cd08530         157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ---DLRY----KVQRGKY---------  218 (256)
T ss_pred             --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----HHhcCCC---------
Confidence              222345788999999998888999999999999999999999999754321   1111    1111111         


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHh
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL  623 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  623 (645)
                      ..........+..++.+|++.+|++||++.+++++.
T Consensus       219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p  254 (256)
T cd08530         219 PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASP  254 (256)
T ss_pred             CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCC
Confidence            111223345688899999999999999999999874

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=3.5e-35  Score=311.09  Aligned_cols=267  Identities=25%  Similarity=0.359  Sum_probs=202.2

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeC--CeE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEK--KEL  424 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~--~~~  424 (645)
                      ..++|...+.||+|+||.||+|.+..+++.+|+|++...  .......+.+|+.++.++ +|+||++++++|...  ...
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            346788889999999999999999888999999988542  334456677899999999 999999999998653  468


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++||||++ ++|..++...  .+++..+..++.||+.||.|||+   .+++||||||+||+++.++.+||+|||++....
T Consensus        85 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~  158 (337)
T cd07852          85 YLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSLS  158 (337)
T ss_pred             EEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence            99999996 5888887543  78999999999999999999998   899999999999999999999999999998654


Q ss_pred             ccCC----cceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc-----
Q 042831          505 HAKG----SQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG-----  574 (645)
Q Consensus       505 ~~~~----~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~-----  574 (645)
                      ....    .......|+..|+|||.+.. ...+.++||||||+++|||++|+.||......+.   .........     
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~---~~~~~~~~~~~~~~  235 (337)
T cd07852         159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ---LEKIIEVIGPPSAE  235 (337)
T ss_pred             cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCCHH
Confidence            3322    12233568899999998755 4578999999999999999999999975432211   111111100     


Q ss_pred             ------C---CccccccCcccc---CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          575 ------N---GKLLEAVDPRLC---RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       575 ------~---~~l~~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                            .   ..+.+.+...-.   ..........+.+++.+|++.||++|||+.+++++.+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~  298 (337)
T cd07852         236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYV  298 (337)
T ss_pred             HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhh
Confidence                  0   000000000000   00000123567888999999999999999999998764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=8.2e-35  Score=299.31  Aligned_cols=249  Identities=26%  Similarity=0.334  Sum_probs=200.5

Q ss_pred             cCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCCh
Q 042831          360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL  436 (645)
Q Consensus       360 LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL  436 (645)
                      ||+|+||+||++....+|+.+|+|.+....   ....+.+..|++++++++|||++++++.+...+..++||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            699999999999999889999999986432   23345677899999999999999999999999999999999999999


Q ss_pred             hhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeecc
Q 042831          437 DSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA  515 (645)
Q Consensus       437 ~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~  515 (645)
                      .+++.... ..+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|||++.....  ........
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~--~~~~~~~~  155 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG--GKKIKGRA  155 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhcc--CCcccccc
Confidence            99987644 468999999999999999999998   8999999999999999999999999999876543  22223345


Q ss_pred             cCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHH
Q 042831          516 GTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQI  595 (645)
Q Consensus       516 gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~  595 (645)
                      ++..|+|||.+.++.++.++||||||++++||++|+.||............   ..    ....  .....    +....
T Consensus       156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~----~~~~--~~~~~----~~~~~  222 (277)
T cd05577         156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEEL---KR----RTLE--MAVEY----PDKFS  222 (277)
T ss_pred             CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHH---Hh----cccc--ccccC----CccCC
Confidence            788999999998888999999999999999999999999754432111111   10    0000  01111    11123


Q ss_pred             HHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC
Q 042831          596 ERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE  626 (645)
Q Consensus       596 ~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~  626 (645)
                      ..+.+++.+||+.||++||     ++.+++.+.++.
T Consensus       223 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~  258 (277)
T cd05577         223 PEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFK  258 (277)
T ss_pred             HHHHHHHHHHccCChhHccCCCcccHHHHHhChhhh
Confidence            4567888999999999999     888899988763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=3.6e-35  Score=310.66  Aligned_cols=268  Identities=21%  Similarity=0.307  Sum_probs=205.6

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeee----CCeE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHE----KKEL  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~----~~~~  424 (645)
                      ..+|+..+.||+|++|.||+|....+++.||+|++....  ....+.+.+|+.++.+++||||+++++++..    ....
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            467888999999999999999999999999999987542  2345678889999999999999999998753    3568


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++||||+. ++|.+++... ..+++..+..++.||+.||.|||+   .+++||||||+||++++++.+||+|||+++...
T Consensus        84 ~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~  158 (334)
T cd07855          84 YVVMDLME-SDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMARGLS  158 (334)
T ss_pred             EEEEehhh-hhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence            99999995 6888887543 458999999999999999999998   899999999999999999999999999997654


Q ss_pred             ccCCcc---eeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc------
Q 042831          505 HAKGSQ---TTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG------  574 (645)
Q Consensus       505 ~~~~~~---~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~------  574 (645)
                      ......   .....++..|+|||.+.. ..++.++|||||||++|||++|+.||........   +..+....+      
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~---~~~~~~~~g~~~~~~  235 (334)
T cd07855         159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ---LKLILSVLGSPSEEV  235 (334)
T ss_pred             ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH---HHHHHHHhCCChhHh
Confidence            322211   123468889999998765 4589999999999999999999999975433211   111111100      


Q ss_pred             -----CCccccccCc-cccCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          575 -----NGKLLEAVDP-RLCRDFD-----GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       575 -----~~~l~~~~d~-~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                           ...+.+..+. .......     ......+.+++..||+.+|++||++++++.+.|++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~  298 (334)
T cd07855         236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLA  298 (334)
T ss_pred             hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhh
Confidence                 0001000000 0000011     11245688899999999999999999999999985

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=7.5e-35  Score=298.47  Aligned_cols=253  Identities=25%  Similarity=0.424  Sum_probs=198.1

Q ss_pred             CCCCCccCcCCcEEEEEEEEcC---CCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC------
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRE---TNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK------  422 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~---~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~------  422 (645)
                      |...+.||+|+||.||+|.+..   +++.||||.+...  .....+++.+|++++++++|||++++++++...+      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            5567889999999999998653   4689999998654  3445678899999999999999999999886432      


Q ss_pred             eEEEEEEecCCCChhhhhhhc-----CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeec
Q 042831          423 ELLLVYEFMPNGSLDSHLFKE-----NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF  497 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~Df  497 (645)
                      ..++++||+++|+|..++...     ...+++.....++.|++.||+|||+   .+++||||||+||+++.++.+||+||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcc
Confidence            347899999999998887532     2357899999999999999999998   89999999999999999999999999


Q ss_pred             cCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcC
Q 042831          498 GLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGN  575 (645)
Q Consensus       498 Gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~  575 (645)
                      |+++........ ......++..|++||.+....++.++|||||||++|||++ |+.||.....   ..+..+..    .
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~---~~~~~~~~----~  230 (273)
T cd05074         158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN---SEIYNYLI----K  230 (273)
T ss_pred             cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH---HHHHHHHH----c
Confidence            999865432211 1122345678999999988889999999999999999999 8899864432   12222211    1


Q ss_pred             CccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          576 GKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       576 ~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      +...     ...    ......+.+++.+|++.+|++||++.|+++.|+.
T Consensus       231 ~~~~-----~~~----~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~  271 (273)
T cd05074         231 GNRL-----KQP----PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL  271 (273)
T ss_pred             CCcC-----CCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            1110     011    1123578889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.7e-35  Score=313.51  Aligned_cols=266  Identities=24%  Similarity=0.313  Sum_probs=203.9

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC-----Ce
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK-----KE  423 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~-----~~  423 (645)
                      .++|...+.||+|+||.||++++..+++.||||.+...  .......+.+|+.++.+++|+|++++++++...     ..
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            45788899999999999999999999999999998653  333456778899999999999999999988644     35


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      .++|+||+. ++|.+++.. ...+++.....++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++..
T Consensus        84 ~~lv~e~~~-~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~  158 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRS-SQTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLARTT  158 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence            899999995 688887754 3569999999999999999999998   89999999999999999999999999999865


Q ss_pred             cccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc--------
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG--------  574 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~--------  574 (645)
                      .... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||........   .....+..+        
T Consensus       159 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~  234 (337)
T cd07858         159 SEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQ---LKLITELLGSPSEEDLG  234 (337)
T ss_pred             CCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHH---HHHHHHHhCCCChHHhh
Confidence            4322 22233457889999998765 4688999999999999999999999975432111   111111110        


Q ss_pred             ---CCcccccc-------CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          575 ---NGKLLEAV-------DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       575 ---~~~l~~~~-------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                         .+...+.+       ++.+.. ........+.+++.+||+.+|++|||++|++++.++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~  295 (337)
T cd07858         235 FIRNEKARRYIRSLPYTPRQSFAR-LFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLA  295 (337)
T ss_pred             hcCchhhhHHHHhcCcccccCHHH-HcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchh
Confidence               01110000       000000 0012235678899999999999999999999998875

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=5.2e-35  Score=297.35  Aligned_cols=248  Identities=26%  Similarity=0.399  Sum_probs=200.4

Q ss_pred             cCcCCcEEEEEEEEcCCCeEEEEEEeccCCh---hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCCh
Q 042831          360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSK---QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL  436 (645)
Q Consensus       360 LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL  436 (645)
                      ||+|+||.||++.+..+++.+++|.+.....   ...+.+.+|++++.+++|+|++++++.+..++..++||||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999999998899999999865433   4567888999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC-------c
Q 042831          437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-------S  509 (645)
Q Consensus       437 ~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~-------~  509 (645)
                      .+++.+.+ .+++..+..++.||++||+|||+   .+++|+||+|+||++++++.+||+|||++........       .
T Consensus        81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  156 (265)
T cd05579          81 ASLLENVG-SLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK  156 (265)
T ss_pred             HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccc
Confidence            99986544 78999999999999999999998   8999999999999999999999999999875443221       1


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      ......++..|++||.......+.++||||||++++||++|+.||......   ....   . ...+....   +.   .
T Consensus       157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---~~~~---~-~~~~~~~~---~~---~  223 (265)
T cd05579         157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE---EIFQ---N-ILNGKIEW---PE---D  223 (265)
T ss_pred             cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH---HHHH---H-HhcCCcCC---Cc---c
Confidence            223355788999999998888999999999999999999999999754321   1111   1 11111110   00   0


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHhccC
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSI---RQVIHVLNFE  626 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~---~evl~~L~~~  626 (645)
                      .  .....+..++..|++.+|++|||+   .+++++.++.
T Consensus       224 ~--~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~  261 (265)
T cd05579         224 V--EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFK  261 (265)
T ss_pred             c--cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCcccc
Confidence            0  013567788899999999999999   7777776654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.9e-36  Score=316.78  Aligned_cols=248  Identities=25%  Similarity=0.361  Sum_probs=204.4

Q ss_pred             CCCCccCcCCcEEEEEEEEcCC---CeEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          355 NDDQKLGQGGFGGVYKGFFRET---NSYIAVKRVSQGSKQ-GIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       355 ~~~~~LG~G~fG~Vy~g~~~~~---~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ...++||+|.||.|++|.|...   -..||||+++.+... .+.+|++|+.+|.+|+|+|+++|+|...+ ....+|+|+
T Consensus       113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL  191 (1039)
T KOG0199|consen  113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL  191 (1039)
T ss_pred             HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence            3467899999999999999742   257999999877544 78899999999999999999999999987 778999999


Q ss_pred             cCCCChhhhhhh-cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      ++.|+|.+.|.+ ....+.....+.++.|||.||.||..   +++|||||..+|+||-....+||+||||.+.+......
T Consensus       192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~  268 (1039)
T KOG0199|consen  192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM  268 (1039)
T ss_pred             cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence            999999999987 56678889999999999999999999   99999999999999999999999999999977654432


Q ss_pred             ce--eecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          510 QT--TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       510 ~~--~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                      ..  ....-...|.|||.++..+++.+||||+|||.||||++ |+.||-+-....                +++.+|..-
T Consensus       269 Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q----------------IL~~iD~~e  332 (1039)
T KOG0199|consen  269 YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ----------------ILKNIDAGE  332 (1039)
T ss_pred             eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH----------------HHHhccccc
Confidence            21  11233557999999999999999999999999999999 889987543321                112222211


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHV  622 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  622 (645)
                      .-..+..+.+.+.++++.||..+|++|||+..+.+.
T Consensus       333 rLpRPk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  333 RLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             cCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence            112233456788999999999999999999999743

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-34  Score=295.99  Aligned_cols=252  Identities=25%  Similarity=0.411  Sum_probs=200.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-----ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC--CeE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-----SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KEL  424 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~--~~~  424 (645)
                      .+|...+.||+|+||.||+|.+..++..||+|.+...     ..+..+.+.+|++++++++|+||+++++++.+.  +.+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4688899999999999999999988999999987532     234456888999999999999999999998754  468


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++|+||+++++|.+++... ..+++.....++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||+++...
T Consensus        82 ~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~  157 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAY-GALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRIQ  157 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence            8999999999999988643 358899999999999999999998   899999999999999999999999999998653


Q ss_pred             ccC--CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          505 HAK--GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       505 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      ...  ........++..|+|||++.+...+.++|+|||||+++||++|+.||......   .   .+......+     .
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~---~~~~~~~~~-----~  226 (264)
T cd06653         158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM---A---AIFKIATQP-----T  226 (264)
T ss_pred             cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH---H---HHHHHHcCC-----C
Confidence            221  11223356888999999998888999999999999999999999999743221   1   111111111     1


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHh
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL  623 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  623 (645)
                      .+.    .+....+.+.+++..|++ +|.+||+..+++.|+
T Consensus       227 ~~~----~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~  262 (264)
T cd06653         227 KPM----LPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHP  262 (264)
T ss_pred             CCC----CCcccCHHHHHHHHHHhc-CcccCccHHHHhcCC
Confidence            111    222233556777889998 579999999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=2.6e-34  Score=301.26  Aligned_cols=250  Identities=26%  Similarity=0.382  Sum_probs=201.5

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      |...++||+|+||.||+|+...+++.|++|++...   .....+.+.+|++++++++|+|++++++++.+....++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            55567899999999999999888999999998643   233456788999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +. |+|.+.+......+++..+..++.||+.||.|||+   .+++|+||+|+||+++.++.+||+|||++.....     
T Consensus       103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-----  173 (313)
T cd06633         103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-----  173 (313)
T ss_pred             CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCC-----
Confidence            95 67878776666779999999999999999999998   8999999999999999999999999999864321     


Q ss_pred             eeecccCccccCccccc---cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          511 TTVLAGTMGYMAPECAT---TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~---~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      .....|+..|+|||++.   .+.++.++|||||||++|||++|+.||......      ......... ..     +...
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~------~~~~~~~~~-~~-----~~~~  241 (313)
T cd06633         174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQN-DS-----PTLQ  241 (313)
T ss_pred             CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHhc-CC-----CCCC
Confidence            22346788999999874   456889999999999999999999998654321      111111111 11     1111


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                         .......+..++.+||+.+|++||++.+++.+.++..
T Consensus       242 ---~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~  278 (313)
T cd06633         242 ---SNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRR  278 (313)
T ss_pred             ---ccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence               1111234677889999999999999999999988764

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=1e-34  Score=301.30  Aligned_cols=252  Identities=25%  Similarity=0.323  Sum_probs=204.0

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCCh
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL  436 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL  436 (645)
                      ..+||+|+||.||++....+++.||+|++..........+.+|+.++++++|+|++++++++...+..++||||+++++|
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence            35799999999999999989999999998765555667899999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeeccc
Q 042831          437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG  516 (645)
Q Consensus       437 ~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~g  516 (645)
                      .+++..  ..+++.....++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++....... .......+
T Consensus       105 ~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~  178 (292)
T cd06657         105 TDIVTH--TRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSLVG  178 (292)
T ss_pred             HHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceeccccc-cccccccc
Confidence            987743  358999999999999999999998   899999999999999999999999999987553322 12233568


Q ss_pred             CccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHH
Q 042831          517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIE  596 (645)
Q Consensus       517 t~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~  596 (645)
                      +..|++||.+.+..++.++|+||||+++|||++|+.||......   ........         ...+.+..  ......
T Consensus       179 ~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~---~~~~~~~~---------~~~~~~~~--~~~~~~  244 (292)
T cd06657         179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL---KAMKMIRD---------NLPPKLKN--LHKVSP  244 (292)
T ss_pred             CccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHh---------hCCcccCC--cccCCH
Confidence            89999999998888999999999999999999999999743321   11111110         01111110  011223


Q ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          597 RLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       597 ~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      .+..++.+||+.+|.+||++.+++++-++...
T Consensus       245 ~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~  276 (292)
T cd06657         245 SLKGFLDRLLVRDPAQRATAAELLKHPFLAKA  276 (292)
T ss_pred             HHHHHHHHHHhCCcccCcCHHHHhcChHHhcc
Confidence            45677889999999999999999999887643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4.3e-35  Score=325.84  Aligned_cols=271  Identities=20%  Similarity=0.292  Sum_probs=193.1

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCC-eEEEEEE--------------ec---cCChhhHHHHHHHHHHHHhcCCCCc
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETN-SYIAVKR--------------VS---QGSKQGIKEYASEVKIISRLRHRNL  411 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~-~~vavK~--------------~~---~~~~~~~~~~~~Ei~~l~~l~H~nl  411 (645)
                      ..++|...++||+|+||+||++.++... ...+.|.              +.   .........+.+|+.++.+++|+||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            3468999999999999999998765322 2222221              10   1122334568899999999999999


Q ss_pred             cEEEeeeeeCCeEEEEEEecCCCChhhhhhhc----CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC
Q 042831          412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKE----NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD  487 (645)
Q Consensus       412 v~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld  487 (645)
                      +++++++...+..++|+|++ .++|.+++...    ...........|+.||+.||.|||+   ++|+||||||+|||++
T Consensus       226 v~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl~  301 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFLN  301 (501)
T ss_pred             CcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEC
Confidence            99999999999999999998 45677766432    1223456677899999999999998   8999999999999999


Q ss_pred             CCCcEEEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCC-CCCCCCCCCchhHH
Q 042831          488 SNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRK-PINPKAPQGQVSLL  566 (645)
Q Consensus       488 ~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~-pf~~~~~~~~~~l~  566 (645)
                      .++.+||+|||+++.+............||..|+|||++.+..++.++|||||||++|||++|+. |+..........+.
T Consensus       302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~  381 (501)
T PHA03210        302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL  381 (501)
T ss_pred             CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence            99999999999998765433333344679999999999999999999999999999999999875 44432222111111


Q ss_pred             HHH-----------------HHHhcCCccc---cccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          567 QWV-----------------WDLYGNGKLL---EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       567 ~~~-----------------~~~~~~~~l~---~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..+                 ++++....+.   ..+.+.+...   .....+..++.+||+.||++|||+.|++++.++.
T Consensus       382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~  458 (501)
T PHA03210        382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNL---GLPADFEYPLVKMLTFDWHLRPGAAELLALPLFS  458 (501)
T ss_pred             HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhc---CCChHHHHHHHHHhccCcccCcCHHHHhhChhhh
Confidence            111                 1111000000   0000000000   0112355678899999999999999999999875


Q ss_pred             C
Q 042831          627 A  627 (645)
Q Consensus       627 ~  627 (645)
                      .
T Consensus       459 ~  459 (501)
T PHA03210        459 A  459 (501)
T ss_pred             c
Confidence            4

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=1.7e-34  Score=304.72  Aligned_cols=264  Identities=21%  Similarity=0.267  Sum_probs=199.0

Q ss_pred             CccCcC--CcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQG--GFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G--~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      ..||+|  +||+||++.+..+|+.||+|.+...  .....+.+.+|+.++..++||||++++++|..++..++|+||+.+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            456666  9999999999989999999998653  234457788999999999999999999999999999999999999


Q ss_pred             CChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc--
Q 042831          434 GSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ--  510 (645)
Q Consensus       434 gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~--  510 (645)
                      ++|.+++.+. ...+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+|++||+.+..........  
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (328)
T cd08226          84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV  160 (328)
T ss_pred             CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence            9999988654 3458999999999999999999998   899999999999999999999999998654332111110  


Q ss_pred             ----eeecccCccccCccccccC--CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHH--------------
Q 042831          511 ----TTVLAGTMGYMAPECATTG--KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVW--------------  570 (645)
Q Consensus       511 ----~~~~~gt~~y~aPE~~~~~--~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~--------------  570 (645)
                          .....++..|+|||++.+.  .++.++|||||||+++||++|+.||.......  .+.....              
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  238 (328)
T cd08226         161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ--MLLQKLKGPPYSPLDITTFPC  238 (328)
T ss_pred             cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH--HHHHHhcCCCCCCccccccch
Confidence                0112345679999998764  47899999999999999999999997543211  1111000              


Q ss_pred             --HHhc----------------CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          571 --DLYG----------------NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       571 --~~~~----------------~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                        ....                .+......+..+...........+.+++.+||+.||++|||+.|++++.++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~  312 (328)
T cd08226         239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFK  312 (328)
T ss_pred             hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHH
Confidence              0000                0000011111111222233456788999999999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-35  Score=302.80  Aligned_cols=277  Identities=25%  Similarity=0.334  Sum_probs=221.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      .+.|..-+.||+||||.||-++.+.+|+.+|.|++.+.   .+++....++|-.+|.+++.+.||.+--.++..+.+|+|
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV  263 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV  263 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence            46788899999999999999999999999999988643   345566788999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          428 YEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      +..|.||+|.-+|.+. +..+++....-.+.+|+.||++||.   .+||.|||||+|||||+.|+++|+|+|||..+...
T Consensus       264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g  340 (591)
T KOG0986|consen  264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG  340 (591)
T ss_pred             EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence            9999999999999764 3578999999999999999999999   99999999999999999999999999999866543


Q ss_pred             CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                        ......+||.+|||||++.++.|+...|.||+||+||||+.|+.||..........-++   ....+       |   
T Consensus       341 --~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvd---rr~~~-------~---  405 (591)
T KOG0986|consen  341 --KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVD---RRTLE-------D---  405 (591)
T ss_pred             --CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHH---HHHhc-------c---
Confidence              33444589999999999999999999999999999999999999997544322211111   00000       1   


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC-CCCCCCCCCCCCCCCCCCC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE-APLPALPPKMPVPTYLSPP  645 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~-~~~p~~p~~~p~~~~~~~p  645 (645)
                      ..+++..-.+....+....|+.||++|-     .+.+|.+|.-|. .+++.+-..+-.|++.|+|
T Consensus       406 ~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPdp  470 (591)
T KOG0986|consen  406 PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDP  470 (591)
T ss_pred             hhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCCc
Confidence            1123333344555666778899999986     567899988765 4556665555555555544

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=1.5e-34  Score=302.33  Aligned_cols=251  Identities=27%  Similarity=0.382  Sum_probs=202.1

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .|...+.||+|++|.||+|+...++..+|+|.+...   .....+++.+|++++++++|+|++++++++......++|||
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence            366678899999999999999988999999998642   33445678899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+. |+|.+.+......+++..+..++.|++.||.|||+   .+++||||+|+||+++.++.+||+|||++......   
T Consensus        96 ~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~---  168 (308)
T cd06634          96 YCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA---  168 (308)
T ss_pred             ccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecCc---
Confidence            996 68887776656678999999999999999999998   89999999999999999999999999998754321   


Q ss_pred             ceeecccCccccCccccc---cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          510 QTTVLAGTMGYMAPECAT---TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~---~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                        ....++..|+|||.+.   .+..+.++|||||||++|||++|+.||......      ....... .+..     +..
T Consensus       169 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~-~~~~-----~~~  234 (308)
T cd06634         169 --NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIA-QNES-----PAL  234 (308)
T ss_pred             --ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH------HHHHHHh-hcCC-----CCc
Confidence              2345788999999874   356788999999999999999999998643221      1111111 1111     111


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      .   .......+..++.+||+.+|++||++.+++++.+...
T Consensus       235 ~---~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~  272 (308)
T cd06634         235 Q---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  272 (308)
T ss_pred             C---cccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence            1   1122345678889999999999999999999988654

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.3e-35  Score=311.99  Aligned_cols=266  Identities=21%  Similarity=0.329  Sum_probs=200.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC------C
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK------K  422 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~------~  422 (645)
                      .++|...+.||+|+||.||+|++..+|+.||+|++...  .......+.+|+.++++++|+||+++++++...      .
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            36888899999999999999999888999999998643  223345688999999999999999999988654      3


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      ..++|+||+.. +|..+.   +..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.
T Consensus        94 ~~~lv~e~~~~-~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~  166 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGLARH  166 (342)
T ss_pred             eEEEEeccccc-CHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCCCCcC
Confidence            56999999964 666554   2368999999999999999999998   8999999999999999999999999999875


Q ss_pred             ccccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc-------
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG-------  574 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~-------  574 (645)
                      ....    .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||......   ......+...+       
T Consensus       167 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~  239 (342)
T cd07879         167 ADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL---DQLTQILKVTGVPGPEFV  239 (342)
T ss_pred             CCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHhcCCCCHHHH
Confidence            4321    123456888999998876 46889999999999999999999999754321   11111111100       


Q ss_pred             ----CCccccccC--ccc-cCCCC---HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCC
Q 042831          575 ----NGKLLEAVD--PRL-CRDFD---GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLP  630 (645)
Q Consensus       575 ----~~~l~~~~d--~~l-~~~~~---~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  630 (645)
                          .......+.  +.. .....   ......+.+++..||++||++||++++++.+.+++.-.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         240 QKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             HHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence                000000000  000 00000   012245678999999999999999999999988875433

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=3.1e-34  Score=293.73  Aligned_cols=252  Identities=19%  Similarity=0.237  Sum_probs=196.1

Q ss_pred             HHhhcCCCCCCcc--CcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeE
Q 042831          348 ALATNDFNDDQKL--GQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       348 ~~~~~~f~~~~~L--G~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~  424 (645)
                      ....++|...+.+  |+|+||.||++....++..+|+|.+.......     .|+.....+ +|+|++++++++...+..
T Consensus        10 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~~~   84 (267)
T PHA03390         10 VQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLKGH   84 (267)
T ss_pred             HHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCCee
Confidence            3344566666666  99999999999999999999999986432111     122222222 699999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC-cEEEeeccCcccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF-NAKIGDFGLARLV  503 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~-~~kl~DfGla~~~  503 (645)
                      ++||||+++++|.+++... ..+++..+..++.|+++||.|||+   .+++||||||+||+++.++ .++|+|||+++..
T Consensus        85 ~iv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~  160 (267)
T PHA03390         85 VLIMDYIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKII  160 (267)
T ss_pred             EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCccceec
Confidence            9999999999999998654 378999999999999999999998   8999999999999999988 9999999998755


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ...     ....++..|+|||++.+..++.++||||||++++||++|+.||...... ......+....  ...      
T Consensus       161 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~--~~~------  226 (267)
T PHA03390        161 GTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE-ELDLESLLKRQ--QKK------  226 (267)
T ss_pred             CCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc-hhhHHHHHHhh--ccc------
Confidence            322     2235788999999999888999999999999999999999999844322 11222222111  000      


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHhccC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPS-IRQVIHVLNFE  626 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~L~~~  626 (645)
                      ...    .......+.+++..||+++|++||+ ++|++++-|+.
T Consensus       227 ~~~----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        227 LPF----IKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             CCc----ccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence            001    1123345677889999999999995 69999988764

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=7.4e-35  Score=302.73  Aligned_cols=258  Identities=26%  Similarity=0.401  Sum_probs=201.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      -++|...+.||+|++|.||+|.+..+++.||||.+.... .....++..|+.++.+.. |+||++++++|..+...++||
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            356788899999999999999999889999999987543 334556777888777775 999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||++ ++|.+++......+++..+..++.|++.||+|||+  ..+++||||+|+||++++++.+||+|||++........
T Consensus        94 e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~  170 (296)
T cd06618          94 ELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA  170 (296)
T ss_pred             eccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence            9985 57777765555689999999999999999999997  25899999999999999999999999999876533221


Q ss_pred             cceeecccCccccCccccccCC----CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          509 SQTTVLAGTMGYMAPECATTGK----ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~----~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                        .....++..|+|||.+....    ++.++||||||+++|||++|+.||......  .   +........ ..     +
T Consensus       171 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~---~~~~~~~~~-~~-----~  237 (296)
T cd06618         171 --KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE--F---EVLTKILQE-EP-----P  237 (296)
T ss_pred             --ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH--H---HHHHHHhcC-CC-----C
Confidence              12235778999999987553    788999999999999999999999643221  1   111111111 11     0


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .+..  .....+.+.+++.+||+.||++||++++++++.+..
T Consensus       238 ~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~  277 (296)
T cd06618         238 SLPP--NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIR  277 (296)
T ss_pred             CCCC--CCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhh
Confidence            1100  001234678888999999999999999999998865

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=8.8e-35  Score=303.61  Aligned_cols=267  Identities=27%  Similarity=0.319  Sum_probs=201.4

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh--hhHHHHHHHHHHHHhcCCCCccEEEeeeeeC-------
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK--QGIKEYASEVKIISRLRHRNLVQLLGWCHEK-------  421 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~-------  421 (645)
                      .++|...++||+|++|.||+|.+..+++.+|+|++.....  .....+.+|++++++++|+||+++++++...       
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            4688999999999999999999998899999998864422  2234677899999999999999999987543       


Q ss_pred             -CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCc
Q 042831          422 -KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA  500 (645)
Q Consensus       422 -~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla  500 (645)
                       ..+++|+||+.+ +|...+......+++..+..++.|+++||.|||+   .+++|+||||+||++++++.+||+|||++
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~  162 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFGLA  162 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcCccc
Confidence             357999999964 6777776656679999999999999999999998   89999999999999999999999999999


Q ss_pred             ccccccCCc----------ceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHH
Q 042831          501 RLVEHAKGS----------QTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWV  569 (645)
Q Consensus       501 ~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~  569 (645)
                      +........          ......++..|+|||.+.+. .++.++|||||||++|||++|+.||.......   ....+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~---~~~~~  239 (311)
T cd07866         163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID---QLHLI  239 (311)
T ss_pred             hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHH
Confidence            765432211          11234567889999987654 57899999999999999999999997544321   11112


Q ss_pred             HHHhcCC---------cccccc--------CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          570 WDLYGNG---------KLLEAV--------DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       570 ~~~~~~~---------~l~~~~--------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      +.....-         .+....        ++.+...+ ......+.+++.+|++.||++|||+.|++.+.++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERF-GKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHc-ccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            2111100         000000        01110000 0112567889999999999999999999988764

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-34  Score=297.63  Aligned_cols=265  Identities=23%  Similarity=0.270  Sum_probs=201.2

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-hhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeEEEEEEec
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-QGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      |...+.||+|++|.||+|+...+++.|+||++..... .......+|+..+.+++ |+|++++++++..++..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            5667899999999999999988899999999865422 23334567999999999 999999999999999999999999


Q ss_pred             CCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          432 PNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       432 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                       +|+|.+++.... ..+++.++..++.|++.+|.|||+   .+++|+||+|+||++++++.++|+|||++.......  .
T Consensus        81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--~  154 (283)
T cd07830          81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--P  154 (283)
T ss_pred             -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCC--C
Confidence             889998886654 578999999999999999999998   899999999999999999999999999997654322  2


Q ss_pred             eeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHH----------HHHHHHhcCCccc
Q 042831          511 TTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL----------QWVWDLYGNGKLL  579 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~----------~~~~~~~~~~~l~  579 (645)
                      .....++..|+|||++.. ..++.++|+||||++++||++|+.||......+.....          .|...........
T Consensus       155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd07830         155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG  234 (283)
T ss_pred             cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence            223457889999998754 45799999999999999999999999655432111000          0100000000111


Q ss_pred             cccCcccc---CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          580 EAVDPRLC---RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       580 ~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ..+.....   ..........+..++.+|++.+|++||+++|++.+.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~  282 (283)
T cd07830         235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY  282 (283)
T ss_pred             ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCC
Confidence            01110000   0000111356889999999999999999999998865

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=1.6e-34  Score=305.71  Aligned_cols=268  Identities=23%  Similarity=0.256  Sum_probs=203.6

Q ss_pred             cCCC-CCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhh--------------HHHHHHHHHHHHhcCCCCccEEEe
Q 042831          352 NDFN-DDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQG--------------IKEYASEVKIISRLRHRNLVQLLG  416 (645)
Q Consensus       352 ~~f~-~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~--------------~~~~~~Ei~~l~~l~H~nlv~l~~  416 (645)
                      ++|. ..+.||+|+||.||+|.+..+++.||+|.++......              ...+.+|++++.+++|+|++++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            4454 3567999999999999999889999999886432211              125778999999999999999999


Q ss_pred             eeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEee
Q 042831          417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD  496 (645)
Q Consensus       417 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~D  496 (645)
                      ++..++..++||||+. |+|.+++.. ...+++.....++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~kl~d  162 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICKIAD  162 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEEECC
Confidence            9999999999999996 688888743 4568999999999999999999998   8999999999999999999999999


Q ss_pred             ccCcccccccC-------------CcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc
Q 042831          497 FGLARLVEHAK-------------GSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQ  562 (645)
Q Consensus       497 fGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~  562 (645)
                      ||+++......             ........++..|+|||.+.+. .++.++|||||||++|||++|+.||......  
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~--  240 (335)
T PTZ00024        163 FGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI--  240 (335)
T ss_pred             ccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--
Confidence            99987654110             1111223467889999988764 4689999999999999999999999755432  


Q ss_pred             hhHHHHHHHHhcCCc---ccccc------------CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          563 VSLLQWVWDLYGNGK---LLEAV------------DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       563 ~~l~~~~~~~~~~~~---l~~~~------------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                       .....+....+...   ..+..            .+.... ........+.+++..|++.+|++||+++|++.+.++..
T Consensus       241 -~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~  318 (335)
T PTZ00024        241 -DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKT-IFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKS  318 (335)
T ss_pred             -HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHH-hCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCC
Confidence             22222222222111   00000            000000 00112356778999999999999999999999999874


Q ss_pred             C
Q 042831          628 P  628 (645)
Q Consensus       628 ~  628 (645)
                      .
T Consensus       319 ~  319 (335)
T PTZ00024        319 D  319 (335)
T ss_pred             C
Confidence            3

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.5e-35  Score=309.95  Aligned_cols=266  Identities=24%  Similarity=0.286  Sum_probs=207.1

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC-----eEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK-----ELL  425 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~-----~~~  425 (645)
                      +|...+.||+|++|.||+|+...+++.||+|++....  ....+.+.+|+.++++++|+||+++++++....     ..+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            4778899999999999999998889999999987643  445678899999999999999999999988765     789


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +||||++ ++|.+++... ..+++..+..++.||+.||.|||+   .+++|+||||+|||++.++.++|+|||++.....
T Consensus        81 lv~e~~~-~~l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~  155 (330)
T cd07834          81 IVTELME-TDLHKVIKSP-QPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGVDP  155 (330)
T ss_pred             EEecchh-hhHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence            9999997 5788887543 479999999999999999999998   8999999999999999999999999999987654


Q ss_pred             cCC--cceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC-------
Q 042831          506 AKG--SQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN-------  575 (645)
Q Consensus       506 ~~~--~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~-------  575 (645)
                      ...  .......++..|+|||.+.+. .++.++|+||||+++++|++|+.||......+.   ...+......       
T Consensus       156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~  232 (330)
T cd07834         156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ---LNLIVEVLGTPSEEDLK  232 (330)
T ss_pred             cccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH---HHHHHHhcCCCChhHhh
Confidence            321  122334578899999999887 789999999999999999999999976543211   1111111100       


Q ss_pred             ----CccccccCc-cccCC-----CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          576 ----GKLLEAVDP-RLCRD-----FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       576 ----~~l~~~~d~-~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                          ....+.+.. .....     ........+.+++.+||+.+|++||++++++++.+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~  293 (330)
T cd07834         233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLA  293 (330)
T ss_pred             hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHH
Confidence                000000000 00000     0011235677899999999999999999999999875

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5e-36  Score=313.99  Aligned_cols=255  Identities=24%  Similarity=0.384  Sum_probs=213.7

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      |.+...||.|+||.||++..++++...|-|.+...+.+..++|+-|+++|....||+||+|++.|..++.+++..|||+|
T Consensus        34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G  113 (1187)
T KOG0579|consen   34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG  113 (1187)
T ss_pred             HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence            44567899999999999999999988999999888888999999999999999999999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |-.+..+..-+..|.+.++.-+++|++.||.|||+   +.|||||||+.|||++-+|.++|+|||.+-.... .......
T Consensus       114 GAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-t~qkRDs  189 (1187)
T KOG0579|consen  114 GAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-TRQKRDS  189 (1187)
T ss_pred             chHhHHHHHhccccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchh-HHhhhcc
Confidence            99999998888899999999999999999999999   9999999999999999999999999999753321 1223345


Q ss_pred             cccCccccCcccc-----ccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          514 LAGTMGYMAPECA-----TTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       514 ~~gt~~y~aPE~~-----~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      +.||+.|||||++     ...+|+.++||||||+.|.||+.+.+|...-++-  ..++.          +...-.|.+..
T Consensus       190 FIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM--RVllK----------iaKSePPTLlq  257 (1187)
T KOG0579|consen  190 FIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLK----------IAKSEPPTLLQ  257 (1187)
T ss_pred             ccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH--HHHHH----------HhhcCCCcccC
Confidence            7899999999976     4567999999999999999999999997643321  11111          11111233322


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                        +......+.++...||..||+.||++.++++|.+..
T Consensus       258 --PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~  293 (1187)
T KOG0579|consen  258 --PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQ  293 (1187)
T ss_pred             --cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccc
Confidence              224455677888999999999999999999999875

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=8e-35  Score=298.85  Aligned_cols=253  Identities=24%  Similarity=0.353  Sum_probs=207.1

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ++|...+.||+|++|.||++....+++.||+|.+...   .....+.+..|++++.+++ |+||+++++++...+..++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            4688889999999999999999989999999998653   2334567889999999998 99999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+++++|.+++.+. ..+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++.......
T Consensus        81 ~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~  156 (280)
T cd05581          81 LEYAPNGELLQYIRKY-GSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS  156 (280)
T ss_pred             EcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence            9999999999998654 479999999999999999999998   899999999999999999999999999987654322


Q ss_pred             C-------------------cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHH
Q 042831          508 G-------------------SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQW  568 (645)
Q Consensus       508 ~-------------------~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~  568 (645)
                      .                   .......++..|+|||.+.....+.++|+||||++++|+++|+.||.....   ......
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~~~  233 (280)
T cd05581         157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE---YLTFQK  233 (280)
T ss_pred             ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH---HHHHHH
Confidence            1                   122334578899999999888899999999999999999999999975431   111111


Q ss_pred             HHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHhcc
Q 042831          569 VWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSI----RQVIHVLNF  625 (645)
Q Consensus       569 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~----~evl~~L~~  625 (645)
                      ..    ..      ..    ..+....+.+.+++.+|++.+|++||++    ++++++.++
T Consensus       234 ~~----~~------~~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         234 IL----KL------EY----SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             HH----hc------CC----CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            11    00      01    1111123567888999999999999999    999988763

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-34  Score=296.37  Aligned_cols=262  Identities=25%  Similarity=0.324  Sum_probs=198.8

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhc---CCCCccEEEeeeeeCCe-----
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRL---RHRNLVQLLGWCHEKKE-----  423 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l---~H~nlv~l~~~~~~~~~-----  423 (645)
                      |+..+.||+|+||.||+|.+..+++.+|+|++....  ......+.+|+.++.++   +|+|++++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            566789999999999999998889999999987432  22234566788877766   59999999999987766     


Q ss_pred             EEEEEEecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      .+++|||+. ++|.+++.... ..+++..+..++.|+++||.|||+   .+++|+||+|+||+++.++.+||+|||++..
T Consensus        81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~~~~  156 (287)
T cd07838          81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLARI  156 (287)
T ss_pred             eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCccee
Confidence            999999996 57888886533 468999999999999999999998   8999999999999999999999999999976


Q ss_pred             ccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC-Ccc---
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN-GKL---  578 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~-~~l---  578 (645)
                      .....  ......++..|+|||.+.+..++.++|+|||||++|||++|+.||......+   ....+.+.... +..   
T Consensus       157 ~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  231 (287)
T cd07838         157 YSFEM--ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD---QLDKIFDVIGLPSEEEWP  231 (287)
T ss_pred             ccCCc--ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH---HHHHHHHHcCCCChHhcC
Confidence            64322  1122347888999999998889999999999999999999999997544321   11111111110 000   


Q ss_pred             ------ccccCcccc---CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          579 ------LEAVDPRLC---RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       579 ------~~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                            .........   .....+....+.+++.+||+.||++||+++|++++-+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~  286 (287)
T cd07838         232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPY  286 (287)
T ss_pred             CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcC
Confidence                  000000000   0111123456778999999999999999999998765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-34  Score=295.79  Aligned_cols=264  Identities=25%  Similarity=0.327  Sum_probs=205.1

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      |+..+.||+|++|.||+|+...+++.+|+|.+....  ....+.+..|+.++++++|+|++++++++...+..++||||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            456688999999999999999889999999987653  334567889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      + ++|.+++.+....+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||+++....... ..
T Consensus        81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-~~  155 (282)
T cd07829          81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-TY  155 (282)
T ss_pred             C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-cc
Confidence            7 58999997665679999999999999999999999   8999999999999999999999999999976543221 22


Q ss_pred             eecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC---------Cccc--
Q 042831          512 TVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN---------GKLL--  579 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~---------~~l~--  579 (645)
                      ....++..|+|||.+.+. .++.++|||||||+++||++|+.||......   ..........+.         ..+.  
T Consensus       156 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (282)
T cd07829         156 THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI---DQLFKIFQILGTPTEESWPGVTKLPDY  232 (282)
T ss_pred             CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH---HHHHHHHHHhCCCcHHHHHhhcccccc
Confidence            233457789999998776 7899999999999999999999999754421   111111111100         0000  


Q ss_pred             cccCccccCC----CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          580 EAVDPRLCRD----FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       580 ~~~d~~l~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      +..-+.....    ........+.+++..||+.+|++||++++++.+.|+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         233 KPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             cccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            0000000000    000113568889999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.4e-34  Score=304.63  Aligned_cols=276  Identities=22%  Similarity=0.279  Sum_probs=207.3

Q ss_pred             cChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeee
Q 042831          342 FPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCH  419 (645)
Q Consensus       342 ~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~  419 (645)
                      ...+++...+++|...+.||+|+||.||+|....+++.||+|++...  .....+.+.+|++++.+++||||+++++++.
T Consensus         7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~   86 (345)
T cd07877           7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT   86 (345)
T ss_pred             hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence            34566777889999999999999999999999888999999998653  2334567889999999999999999999876


Q ss_pred             eC------CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEE
Q 042831          420 EK------KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK  493 (645)
Q Consensus       420 ~~------~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~k  493 (645)
                      ..      ...+++++++ +++|.+++..  ..+++..+..++.|+++||.|||+   .+++||||||+||++++++.+|
T Consensus        87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~k  160 (345)
T cd07877          87 PARSLEEFNDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELK  160 (345)
T ss_pred             ecccccccccEEEEehhc-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCCCCEE
Confidence            43      3468888887 7889887743  358999999999999999999998   8999999999999999999999


Q ss_pred             EeeccCcccccccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHH-H----
Q 042831          494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL-Q----  567 (645)
Q Consensus       494 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~-~----  567 (645)
                      |+|||+++....    ......++..|+|||.+.+ ..++.++|||||||+++||++|+.||............ .    
T Consensus       161 l~dfg~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  236 (345)
T cd07877         161 ILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT  236 (345)
T ss_pred             Eecccccccccc----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            999999875432    2233467889999998866 46889999999999999999999999654321111000 0    


Q ss_pred             ---HHHHHhcCCcc---ccccCccccCCCC---HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          568 ---WVWDLYGNGKL---LEAVDPRLCRDFD---GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       568 ---~~~~~~~~~~l---~~~~d~~l~~~~~---~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                         ...........   ...++......+.   ......+.+++..|++.||++||++.+++++.++..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~  305 (345)
T cd07877         237 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ  305 (345)
T ss_pred             CCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence               00000000000   0000000000000   011245678899999999999999999999998764

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.3e-35  Score=304.20  Aligned_cols=260  Identities=24%  Similarity=0.373  Sum_probs=206.4

Q ss_pred             HHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEecc--CChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCe
Q 042831          347 LALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQ--GSKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKE  423 (645)
Q Consensus       347 l~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~--~~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~  423 (645)
                      +......|++.++||+||.+.||++...+ .+.+|+|++..  .+.+...-|.+|++.|.+|+ |.+|++|++|-..++.
T Consensus       356 i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~  434 (677)
T KOG0596|consen  356 IKVKGREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGY  434 (677)
T ss_pred             EEECcchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCce
Confidence            33445679999999999999999998765 56678887653  35667888999999999996 9999999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      +|||||| .+-+|..+|.+....++.-.++.+.+||+.++.++|.   .+|||.||||.|+|+- .|.+||+|||.|..+
T Consensus       435 lYmvmE~-Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI  509 (677)
T KOG0596|consen  435 LYMVMEC-GDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLV-KGRLKLIDFGIANAI  509 (677)
T ss_pred             EEEEeec-ccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEE-eeeEEeeeechhccc
Confidence            9999996 4779999998776666533788899999999999999   8999999999999884 568999999999876


Q ss_pred             cccCCc-ceeecccCccccCccccccC-----------CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHH
Q 042831          504 EHAKGS-QTTVLAGTMGYMAPECATTG-----------KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWD  571 (645)
Q Consensus       504 ~~~~~~-~~~~~~gt~~y~aPE~~~~~-----------~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~  571 (645)
                      ...... .....+||+.||+||.+...           +.+++|||||+||+||+|+.|+.||..-.     +..     
T Consensus       510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-----n~~-----  579 (677)
T KOG0596|consen  510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-----NQI-----  579 (677)
T ss_pred             CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-----HHH-----
Confidence            544332 23447899999999987432           25689999999999999999999996311     111     


Q ss_pred             HhcCCccccccCccccCCCCHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          572 LYGNGKLLEAVDPRLCRDFDGQ-QIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       572 ~~~~~~l~~~~d~~l~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                          .++..+.||.-.-+|+.. +-..++.++..||+.||++||+.-|+|+|..-.
T Consensus       580 ----aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~  631 (677)
T KOG0596|consen  580 ----AKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQ  631 (677)
T ss_pred             ----HHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcccc
Confidence                134455666443333321 122278888999999999999999999987644

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-34  Score=282.70  Aligned_cols=268  Identities=23%  Similarity=0.320  Sum_probs=211.7

Q ss_pred             hHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCC
Q 042831          344 YKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKK  422 (645)
Q Consensus       344 ~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~  422 (645)
                      ++++...|     .+.||+|+++.|--++...+|..+|||++.+.......+..+|++++.+.+ |+||++|++||+++.
T Consensus        75 F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~  149 (463)
T KOG0607|consen   75 FEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT  149 (463)
T ss_pred             HHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence            55666655     467999999999999999999999999998887777888999999999986 999999999999999


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC---cEEEeeccC
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF---NAKIGDFGL  499 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~---~~kl~DfGl  499 (645)
                      .+|||||-|.+|+|..+++++ ..+++....++.++|+.||.|||.   ++|.||||||+|||.....   -+||+||.+
T Consensus       150 ~FYLVfEKm~GGplLshI~~~-~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiCDfDL  225 (463)
T KOG0607|consen  150 RFYLVFEKMRGGPLLSHIQKR-KHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKICDFDL  225 (463)
T ss_pred             eEEEEEecccCchHHHHHHHh-hhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeeecccc
Confidence            999999999999999999654 568999999999999999999999   9999999999999996544   489999988


Q ss_pred             cccccc------cCCcceeecccCccccCccccc-----cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc------
Q 042831          500 ARLVEH------AKGSQTTVLAGTMGYMAPECAT-----TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ------  562 (645)
Q Consensus       500 a~~~~~------~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~------  562 (645)
                      ..-...      .........+|...|||||+..     ...|+.+.|.|||||+||-|++|.+||.+....+-      
T Consensus       226 gSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe  305 (463)
T KOG0607|consen  226 GSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGE  305 (463)
T ss_pred             ccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCC
Confidence            753321      1122334467889999999763     23488999999999999999999999986554321      


Q ss_pred             --hhHHHHHHHHhcCCccccccCccccCCCCHHH----HHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCC
Q 042831          563 --VSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQ----IERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLP  630 (645)
Q Consensus       563 --~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~----~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  630 (645)
                        ..--+.+++.+.+|+.          +|++.+    .....+++...+..|+.+|-++.+++.+.|...-.|
T Consensus       306 ~Cr~CQ~~LFesIQEGkY----------eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~  369 (463)
T KOG0607|consen  306 VCRVCQNKLFESIQEGKY----------EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAP  369 (463)
T ss_pred             ccHHHHHHHHHHHhccCC----------cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccch
Confidence              1111223333334432          222222    244556677788899999999999999999764333

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-35  Score=282.52  Aligned_cols=251  Identities=27%  Similarity=0.381  Sum_probs=202.2

Q ss_pred             CCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          356 DDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       356 ~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      ....||.|..|.|++++.+.+|..+|||.+... +++..++++..+.++..-. +|.||+.+|||..+...++.||.| .
T Consensus        96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM-s  174 (391)
T KOG0983|consen   96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM-S  174 (391)
T ss_pred             hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH-H
Confidence            356799999999999999999999999998765 6677888888888887765 899999999999999999999998 4


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      ..++.++..-...+++...-++...+.+||.||.+  +++|+|||+||+|||+|+.|++|+||||.+..+-..  ...+.
T Consensus       175 ~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS--kAhtr  250 (391)
T KOG0983|consen  175 TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS--KAHTR  250 (391)
T ss_pred             HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecc--ccccc
Confidence            45666776667789999999999999999999998  578999999999999999999999999998755322  22344


Q ss_pred             cccCccccCcccccc---CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          514 LAGTMGYMAPECATT---GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~---~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      .+|.+.|||||.+.-   .+|+.++||||||+.|+||+||+.||..-..+  ...+..+.         .-..|.+.++.
T Consensus       251 sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td--Fe~ltkvl---------n~ePP~L~~~~  319 (391)
T KOG0983|consen  251 SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD--FEVLTKVL---------NEEPPLLPGHM  319 (391)
T ss_pred             ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc--HHHHHHHH---------hcCCCCCCccc
Confidence            578999999998854   36889999999999999999999999864432  12222211         11223333221


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        .....+.++...||+.|+.+||...++++|..
T Consensus       320 --gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~F  351 (391)
T KOG0983|consen  320 --GFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPF  351 (391)
T ss_pred             --CcCHHHHHHHHHHhhcCcccCcchHHHhcCcc
Confidence              13346677788999999999999999999864

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.7e-34  Score=289.92  Aligned_cols=247  Identities=23%  Similarity=0.314  Sum_probs=193.0

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHH-HhcCCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKII-SRLRHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l-~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.||+|++|.||+|....+++.||+|.+....   ......+..|..++ ...+|+|++++++++..++..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            56999999999999998889999999986542   22233455565544 445899999999999999999999999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      ++|.+++... ..+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||+++....     ...
T Consensus        82 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~~  152 (260)
T cd05611          82 GDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NKK  152 (260)
T ss_pred             CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccc-----ccc
Confidence            9999988543 468999999999999999999998   8999999999999999999999999999875432     223


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..++..|++||.+.+..++.++||||||+++|||++|+.||......   .    .+.....+...  ..+....    .
T Consensus       153 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~----~~~~~~~~~~~--~~~~~~~----~  219 (260)
T cd05611         153 FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD---A----VFDNILSRRIN--WPEEVKE----F  219 (260)
T ss_pred             CCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH---H----HHHHHHhcccC--CCCcccc----c
Confidence            45788999999998888999999999999999999999999754321   1    11111111111  0111111    1


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCH---HHHHHHhccC
Q 042831          594 QIERLMIVGLWCAHPDENLRPSI---RQVIHVLNFE  626 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RPs~---~evl~~L~~~  626 (645)
                      ....+.+++.+||+.+|++||++   +|++.+.++.
T Consensus       220 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~  255 (260)
T cd05611         220 CSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFK  255 (260)
T ss_pred             CCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhh
Confidence            23567788999999999999955   6777776654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=8.8e-34  Score=297.01  Aligned_cols=262  Identities=21%  Similarity=0.268  Sum_probs=195.2

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS  435 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gs  435 (645)
                      +.+|.|++  ||.++...+++.||+|++...  .....+.+.+|++++++++|+||+++++++...+..+++|||+++|+
T Consensus         8 ~~~~~~~~--v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~   85 (314)
T cd08216           8 KCFEDLMI--VHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS   85 (314)
T ss_pred             HhhcCCce--EEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence            33444444  555555557899999998754  44566789999999999999999999999999999999999999999


Q ss_pred             hhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC------
Q 042831          436 LDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG------  508 (645)
Q Consensus       436 L~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~------  508 (645)
                      |.+++... ...+++.....++.|+++||.|||+   .+|+||||||+||+++.++.+||+|||.+........      
T Consensus        86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~  162 (314)
T cd08216          86 CEDLLKTHFPEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH  162 (314)
T ss_pred             HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence            99998753 4568999999999999999999998   8999999999999999999999999998875432111      


Q ss_pred             cceeecccCccccCccccccC--CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHH----hc-------C
Q 042831          509 SQTTVLAGTMGYMAPECATTG--KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDL----YG-------N  575 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~--~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~----~~-------~  575 (645)
                      .......++..|+|||++...  .++.++|||||||++|||++|+.||......  ..+.+.....    ..       .
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  240 (314)
T cd08216         163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT--QMLLEKVRGTVPCLLDKSTYPLYE  240 (314)
T ss_pred             cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhccCccccccCchhhhc
Confidence            111234567789999998663  5789999999999999999999999754321  1111111000    00       0


Q ss_pred             Ccccc----ccCccc----cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          576 GKLLE----AVDPRL----CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       576 ~~l~~----~~d~~l----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      +....    ..++..    ...........+..++.+||+.||++|||++|++++.++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~  299 (314)
T cd08216         241 DSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFK  299 (314)
T ss_pred             CCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHh
Confidence            00000    001100    0011122345678899999999999999999999999875

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=6e-34  Score=302.32  Aligned_cols=268  Identities=22%  Similarity=0.248  Sum_probs=200.4

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC----------
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK----------  421 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~----------  421 (645)
                      .+|...+.||.|+||.||+|....+++.||+|.+........+.+.+|++++++++||||+++++.+...          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            6788899999999999999999999999999998776666677889999999999999999999776543          


Q ss_pred             ----CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC-CCCcEEEee
Q 042831          422 ----KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD-SNFNAKIGD  496 (645)
Q Consensus       422 ----~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld-~~~~~kl~D  496 (645)
                          ...++||||++ ++|.+++..  ..+++...+.++.||++||.|||+   .+++||||||+||+++ +++.+||+|
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~kl~d  158 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVLKIGD  158 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceEEECC
Confidence                35799999996 588877743  468999999999999999999998   8999999999999997 556789999


Q ss_pred             ccCcccccccCCc--ceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHH----
Q 042831          497 FGLARLVEHAKGS--QTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWV----  569 (645)
Q Consensus       497 fGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~----  569 (645)
                      ||+++........  ......++..|+|||.+.. ..++.++|||||||++|||++|+.||....+..........    
T Consensus       159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~  238 (342)
T cd07854         159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVV  238 (342)
T ss_pred             cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            9999765322111  1122357889999997654 45788999999999999999999999754421111000000    


Q ss_pred             ----HHHhcCCccccccC-ccccCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          570 ----WDLYGNGKLLEAVD-PRLCRDFD-----GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       570 ----~~~~~~~~l~~~~d-~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                          ...... .+...+. .......+     ......+.+++..|+++||++|||+.|++++.++.
T Consensus       239 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~  304 (342)
T cd07854         239 REEDRNELLN-VIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMS  304 (342)
T ss_pred             ChHHhhhhhh-hhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccc
Confidence                000000 0000000 00000000     01224577889999999999999999999999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=1.1e-33  Score=292.89  Aligned_cols=257  Identities=20%  Similarity=0.291  Sum_probs=202.6

Q ss_pred             CCCCCCccCcCCcEEEEEEEEc---CCCeEEEEEEeccCC----hhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFR---ETNSYIAVKRVSQGS----KQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~---~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~  424 (645)
                      +|+..+.||+|+||.||++...   .+|..||+|++....    ....+.+.+|+.++.++ +|+||+++++++..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            4677889999999999999874   368899999986532    22346778899999999 589999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++||||+++++|.+++... ..+++.....++.|+++||.|||+   .+++||||+|+|||++.++.+||+|||+++...
T Consensus        81 ~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  156 (290)
T cd05613          81 HLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFH  156 (290)
T ss_pred             EEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence            9999999999999998654 468899999999999999999998   899999999999999999999999999998654


Q ss_pred             ccCCcceeecccCccccCccccccC--CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          505 HAKGSQTTVLAGTMGYMAPECATTG--KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       505 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      ...........|+..|+|||.+...  .++.++||||||+++|||++|+.||........  ...........       
T Consensus       157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~-------  227 (290)
T cd05613         157 EDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS--QAEISRRILKS-------  227 (290)
T ss_pred             cccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc--HHHHHHHhhcc-------
Confidence            4332333345688999999998753  467899999999999999999999964332211  11111111111       


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE  626 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~  626 (645)
                      .+..    +......+..++.+|++.||++||     ++++++.+.++.
T Consensus       228 ~~~~----~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~  272 (290)
T cd05613         228 EPPY----PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQ  272 (290)
T ss_pred             CCCC----CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccc
Confidence            0111    111234567888999999999997     899999988765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=1.1e-33  Score=298.53  Aligned_cols=272  Identities=26%  Similarity=0.279  Sum_probs=205.5

Q ss_pred             HHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee-CC
Q 042831          346 ELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE-KK  422 (645)
Q Consensus       346 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~-~~  422 (645)
                      ++...+++|+..+.||+|+||.||++....+++.||+|++...  .....+.+..|++++.+++|||++++.+++.. .+
T Consensus         4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   83 (328)
T cd07856           4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE   83 (328)
T ss_pred             ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence            3455778999999999999999999999989999999988643  23345678899999999999999999998865 56


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      ..++|+||+ +++|..++..  ..+++.....++.|+++||.|||+   .+++||||+|+||++++++.+||+|||++..
T Consensus        84 ~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~  157 (328)
T cd07856          84 DIYFVTELL-GTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLARI  157 (328)
T ss_pred             cEEEEeehh-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCccccccc
Confidence            789999998 5688887743  457888889999999999999998   8999999999999999999999999999875


Q ss_pred             ccccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhH-HHH-------HHHHh
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSL-LQW-------VWDLY  573 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l-~~~-------~~~~~  573 (645)
                      ....    .....++..|+|||.+.+ ..++.++||||||++++||++|+.||........... .++       +.+..
T Consensus       158 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (328)
T cd07856         158 QDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTI  233 (328)
T ss_pred             cCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence            4321    123456888999998766 5689999999999999999999999975432111000 000       00000


Q ss_pred             cCCccccccCc-cccCCCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          574 GNGKLLEAVDP-RLCRDFDG-----QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       574 ~~~~l~~~~d~-~l~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ..+...+.+.. ......+.     .....+.+++.+|++.+|++||++.+++.+.+.+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~  293 (328)
T cd07856         234 CSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAP  293 (328)
T ss_pred             cchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccc
Confidence            00000000000 00011111     12356788899999999999999999999988764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.1e-34  Score=307.41  Aligned_cols=250  Identities=24%  Similarity=0.396  Sum_probs=200.6

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEecc----CChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC--eEEEEEEe
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQ----GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK--ELLLVYEF  430 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~----~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~--~~~lV~Ey  430 (645)
                      ..+||+|+|-+||||.+..+|..||--.++.    .+....+.|..|+.+|+.|+||||++++.++.+..  ...+|.|.
T Consensus        45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL  124 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL  124 (632)
T ss_pred             hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence            4679999999999999999998888654432    24556689999999999999999999999887654  48899999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC-CCcEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~-~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |..|+|..|..+. +.++......|++||++||.|||+. .++|||||||-+||+++. .|.+||+|+|||.+....   
T Consensus       125 ~TSGtLr~Y~kk~-~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s---  199 (632)
T KOG0584|consen  125 FTSGTLREYRKKH-RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS---  199 (632)
T ss_pred             ccCCcHHHHHHHh-ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc---
Confidence            9999999999654 4578889999999999999999994 579999999999999975 589999999999876543   


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      ....+.|||.|||||.+. ..|++..||||||++++||+|+.-||..=...      ..++.....|.....+..     
T Consensus       200 ~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~------AQIYKKV~SGiKP~sl~k-----  267 (632)
T KOG0584|consen  200 HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP------AQIYKKVTSGIKPAALSK-----  267 (632)
T ss_pred             ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH------HHHHHHHHcCCCHHHhhc-----
Confidence            334478999999999887 68999999999999999999999999632111      122333333332222211     


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ...   .++.+++.+|+.. ..+|||+.|+|.+.-++.
T Consensus       268 V~d---Pevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~  301 (632)
T KOG0584|consen  268 VKD---PEVREFIEKCLAT-KSERLSAKELLKDPFFDE  301 (632)
T ss_pred             cCC---HHHHHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence            111   2456788999999 999999999999887654

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=8.9e-34  Score=288.50  Aligned_cols=251  Identities=25%  Similarity=0.366  Sum_probs=198.4

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-----ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-----SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      +|...++||+|+||.||++++...+..+++|.++..     ......++..|+.++.+++|||++++++++.+.+..++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            477789999999999999998876666666665432     223345677899999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          428 YEFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      |||+++++|.+++..   .+..+++..++.++.|+++||.|||+   .+++|+||+|+||++++ +.+||+|||+++...
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~  156 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM  156 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeecC
Confidence            999999999988864   34679999999999999999999998   89999999999999975 469999999987653


Q ss_pred             ccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          505 HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       505 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      ... .......++..|+|||.+....++.++|+||||+++|+|++|+.||.....      ....... ..+.     .+
T Consensus       157 ~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~------~~~~~~~-~~~~-----~~  223 (260)
T cd08222         157 GSC-DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF------LSVVLRI-VEGP-----TP  223 (260)
T ss_pred             CCc-ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHH-HcCC-----CC
Confidence            322 122234578899999999888889999999999999999999999964321      1111111 1111     11


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .+    +......+.+++.+|++.+|++||++.|++++.+
T Consensus       224 ~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~  259 (260)
T cd08222         224 SL----PETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPF  259 (260)
T ss_pred             CC----cchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCC
Confidence            11    2233356778889999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.8e-34  Score=303.09  Aligned_cols=255  Identities=23%  Similarity=0.300  Sum_probs=210.9

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ....|.+...||+|.|+.|.+|++..++..||||.+++.  +....+.+.+|+++|..++|||||+++.+......+++|
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV  133 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV  133 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence            346788899999999999999999999999999999765  334445689999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+.+|.+.+++.+++. +.+.....++.|+.++++|||.   +.|+|||||++||||+.+.++||+|||++..+..  
T Consensus       134 ~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~--  207 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFDY--  207 (596)
T ss_pred             EEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeecc--
Confidence            999999999999977655 4448888999999999999999   9999999999999999999999999999988763  


Q ss_pred             CcceeecccCccccCccccccCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~-t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                      .......+|++.|.|||++.+.++ ++++|+||+|++||-|++|..||+...-.+-..               ..+..++
T Consensus       208 ~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~---------------rvl~gk~  272 (596)
T KOG0586|consen  208 GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRP---------------RVLRGKY  272 (596)
T ss_pred             cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccc---------------hheeeee
Confidence            345566889999999999988774 789999999999999999999998654321110               0011111


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      +-.+  --...+-+++++.+-++|.+|+++.+++++-|-..
T Consensus       273 rIp~--~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~  311 (596)
T KOG0586|consen  273 RIPF--YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND  311 (596)
T ss_pred             cccc--eeechhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence            1111  01123446677888999999999999999998654

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=3.2e-33  Score=290.32  Aligned_cols=257  Identities=19%  Similarity=0.234  Sum_probs=186.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCC---CeEEEEEEeccCChhh-----------HHHHHHHHHHHHhcCCCCccEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRET---NSYIAVKRVSQGSKQG-----------IKEYASEVKIISRLRHRNLVQLLG  416 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~---~~~vavK~~~~~~~~~-----------~~~~~~Ei~~l~~l~H~nlv~l~~  416 (645)
                      .++|...++||+|+||.||+|.+.++   +..+|+|.........           ......+...+..++|+|++++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            36788999999999999999998876   5667777643332211           111223444556678999999999


Q ss_pred             eeeeCC----eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcE
Q 042831          417 WCHEKK----ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA  492 (645)
Q Consensus       417 ~~~~~~----~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~  492 (645)
                      ++....    ..++++|++. .++.+.+.. ....++..+..|+.|++.||.|||+   .+++||||||+|||++.++.+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~~~  165 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNNRG  165 (294)
T ss_pred             eeeEecCCceEEEEEEehhc-cCHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCcE
Confidence            776543    3477788764 355555532 2346788899999999999999998   899999999999999999999


Q ss_pred             EEeeccCcccccccCC------cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhH-
Q 042831          493 KIGDFGLARLVEHAKG------SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSL-  565 (645)
Q Consensus       493 kl~DfGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l-  565 (645)
                      +|+|||+++.......      .......||+.|+|||++.+..++.++|||||||+++||++|+.||........... 
T Consensus       166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~  245 (294)
T PHA02882        166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHA  245 (294)
T ss_pred             EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHH
Confidence            9999999986542211      112234699999999999999999999999999999999999999986533221100 


Q ss_pred             --HHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          566 --LQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       566 --~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        .++ .....+++.    .   ....    .+.+.+++..|++.+|++||++.++++.+.
T Consensus       246 ~~~~~-~~~~~~~~~----~---~~~~----~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        246 AKCDF-IKRLHEGKI----K---IKNA----NKFIYDFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             hHHHH-HHHhhhhhh----c---cCCC----CHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence              111 111112211    0   0111    245677888999999999999999998763

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.5e-35  Score=284.28  Aligned_cols=253  Identities=25%  Similarity=0.351  Sum_probs=207.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      .++|...++||+|.||+|-+++-+.+++.+|+|++++.   .+.....-+.|-++|...+||.+..|.-.++..+.+|+|
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV  246 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV  246 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence            46788899999999999999999999999999999875   344455667899999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||..+|.|.-+|.+ .+.+++...+-....|..||.|||+   ++||.||||.+|.|||.+|++||+|||+++.- -..
T Consensus       247 MeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~-I~~  321 (516)
T KOG0690|consen  247 MEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEE-IKY  321 (516)
T ss_pred             EEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhc-ccc
Confidence            999999999988854 5678888888889999999999999   99999999999999999999999999999742 223


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      +..+..++||+.|+|||++....|..+.|.|.+||++|||+|||.||...+.+..       ++++.-+.+      ++ 
T Consensus       322 g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kL-------FeLIl~ed~------kF-  387 (516)
T KOG0690|consen  322 GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKL-------FELILMEDL------KF-  387 (516)
T ss_pred             cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHH-------HHHHHhhhc------cC-
Confidence            4556779999999999999999999999999999999999999999987654322       222211111      11 


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhcc
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNF  625 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~  625 (645)
                         +.....+...|....|..||.+|-     .++||.++--+
T Consensus       388 ---Pr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF  427 (516)
T KOG0690|consen  388 ---PRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFF  427 (516)
T ss_pred             ---CccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhh
Confidence               111112334455678899999995     57788877654

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=2.1e-34  Score=323.07  Aligned_cols=257  Identities=28%  Similarity=0.416  Sum_probs=197.2

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee------
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE------  420 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~------  420 (645)
                      ..-..+|++.+.||+||||.||+++++-+|+.+|||++... +.+......+|+.++++|+|||||+++..+.+      
T Consensus       475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~  554 (1351)
T KOG1035|consen  475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT  554 (1351)
T ss_pred             hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence            34557899999999999999999999999999999998755 45566788899999999999999998753311      


Q ss_pred             --------------------------------------------------------------------------------
Q 042831          421 --------------------------------------------------------------------------------  420 (645)
Q Consensus       421 --------------------------------------------------------------------------------  420 (645)
                                                                                                      
T Consensus       555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS  634 (1351)
T KOG1035|consen  555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS  634 (1351)
T ss_pred             cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence                                                                                            


Q ss_pred             -------------------------C--------CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHH
Q 042831          421 -------------------------K--------KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ  467 (645)
Q Consensus       421 -------------------------~--------~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH  467 (645)
                                               +        ..+||-||||+..+|++++.++...-.....++++++|++||.|+|
T Consensus       635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH  714 (1351)
T KOG1035|consen  635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH  714 (1351)
T ss_pred             ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence                                     0        1357889999888888877554332246678899999999999999


Q ss_pred             hhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc----------------ccC-CcceeecccCccccCccccccC-
Q 042831          468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE----------------HAK-GSQTTVLAGTMGYMAPECATTG-  529 (645)
Q Consensus       468 ~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~----------------~~~-~~~~~~~~gt~~y~aPE~~~~~-  529 (645)
                      +   +++|||||||.||+||++.++||+|||+|....                .+. ....+..+||.-|+|||++.+. 
T Consensus       715 ~---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~  791 (1351)
T KOG1035|consen  715 D---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS  791 (1351)
T ss_pred             h---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence            9   999999999999999999999999999998621                011 1134567899999999998764 


Q ss_pred             --CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCC
Q 042831          530 --KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAH  607 (645)
Q Consensus       530 --~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  607 (645)
                        .|+.|+|+||+||+++||+.   ||...-     +-+..+ .-+++|.+...      ..+...++..=.++++++++
T Consensus       792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM-----ERa~iL-~~LR~g~iP~~------~~f~~~~~~~e~slI~~Ll~  856 (1351)
T KOG1035|consen  792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSM-----ERASIL-TNLRKGSIPEP------ADFFDPEHPEEASLIRWLLS  856 (1351)
T ss_pred             cccccchhhhHHHHHHHHHHhc---cCCchH-----HHHHHH-HhcccCCCCCC------cccccccchHHHHHHHHHhc
Confidence              49999999999999999985   454211     111111 22334544332      22233344445678899999


Q ss_pred             CCCCCCCCHHHHHHH
Q 042831          608 PDENLRPSIRQVIHV  622 (645)
Q Consensus       608 ~dP~~RPs~~evl~~  622 (645)
                      .||.+|||+.|+|..
T Consensus       857 hdP~kRPtA~eLL~s  871 (1351)
T KOG1035|consen  857 HDPSKRPTATELLNS  871 (1351)
T ss_pred             CCCccCCCHHHHhhc
Confidence            999999999999864

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.2e-33  Score=296.88  Aligned_cols=269  Identities=22%  Similarity=0.303  Sum_probs=202.6

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC----
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK----  422 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~----  422 (645)
                      ...++|...+.||+|+||.||++....++..||||++...  .......+.+|+.++++++||||+++++++....    
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07880          12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR   91 (343)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence            3567899999999999999999999988999999998543  2334567889999999999999999999887543    


Q ss_pred             --eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCc
Q 042831          423 --ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA  500 (645)
Q Consensus       423 --~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla  500 (645)
                        ..++||||+ +++|.+++..  ..+++..+..++.|+++||.|||+   .+|+||||||+||+++.++.+||+|||++
T Consensus        92 ~~~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~dfg~~  165 (343)
T cd07880          92 FHDFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLA  165 (343)
T ss_pred             cceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccc
Confidence              469999999 7788887743  468999999999999999999998   89999999999999999999999999998


Q ss_pred             ccccccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCch-hHHH-------HHHH
Q 042831          501 RLVEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQV-SLLQ-------WVWD  571 (645)
Q Consensus       501 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~-~l~~-------~~~~  571 (645)
                      ......    .....++..|+|||.+.+ ..++.++|+||||+++++|++|+.||......... ....       ....
T Consensus       166 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  241 (343)
T cd07880         166 RQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQ  241 (343)
T ss_pred             cccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence            755322    223457889999998876 45889999999999999999999999754321100 0000       0000


Q ss_pred             HhcCCccccccC--ccccC----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          572 LYGNGKLLEAVD--PRLCR----DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       572 ~~~~~~l~~~~d--~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ..........+.  +....    .........+.+++.+|++.||++|||+.+++++.+++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~  303 (343)
T cd07880         242 KLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE  303 (343)
T ss_pred             hhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence            000000000000  00000    000111235778899999999999999999999998763

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=1.8e-33  Score=291.00  Aligned_cols=257  Identities=21%  Similarity=0.296  Sum_probs=198.3

Q ss_pred             CCCCCCccCcCCcEEEEEEEEc---CCCeEEEEEEeccCC----hhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFR---ETNSYIAVKRVSQGS----KQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~---~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~  424 (645)
                      +|...+.||+|++|.||+++..   .+++.||||.+....    ....+.+.+|++++.++ +|+|++++++.+..+...
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            4677889999999999999864   356889999886432    23346788999999999 599999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++||||+++|+|.+++... ..+++.....++.|++++|.|||+   .+++|+||+|+||+++.++.++|+|||+++...
T Consensus        81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  156 (288)
T cd05583          81 HLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKEFL  156 (288)
T ss_pred             EEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence            9999999999999988643 468899999999999999999998   899999999999999999999999999987654


Q ss_pred             ccCCcceeecccCccccCccccccCC--CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          505 HAKGSQTTVLAGTMGYMAPECATTGK--ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       505 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      ...........++..|+|||.+.+..  .+.++||||||++++||++|+.||........  ...........       
T Consensus       157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~~-------  227 (288)
T cd05583         157 AEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS--QSEISRRILKS-------  227 (288)
T ss_pred             cccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch--HHHHHHHHHcc-------
Confidence            43332233356888999999987665  78899999999999999999999964322111  11111111110       


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHhccC
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQV---IHVLNFE  626 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev---l~~L~~~  626 (645)
                      .+.....+    ...+.+++.+|++.||++|||++++   +++.++.
T Consensus       228 ~~~~~~~~----~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~  270 (288)
T cd05583         228 KPPFPKTM----SAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQ  270 (288)
T ss_pred             CCCCCccc----CHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccc
Confidence            11111112    2346678899999999999997655   5555543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=2.9e-34  Score=279.81  Aligned_cols=281  Identities=22%  Similarity=0.311  Sum_probs=210.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCC----eEEEEEEeccCCh--hhHHHHHHHHHHHHhcCCCCccEEEeeeee-CCeE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETN----SYIAVKRVSQGSK--QGIKEYASEVKIISRLRHRNLVQLLGWCHE-KKEL  424 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~----~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~-~~~~  424 (645)
                      ..|+....||+|.+|.||++.-.+++    +.+|+|+++...+  .-.....+|+.++++++||||+.|..++.. +...
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            46788899999999999999766543    3789999875532  223466789999999999999999998876 7889


Q ss_pred             EEEEEecCCCChhhhhhh----cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC----CcEEEee
Q 042831          425 LLVYEFMPNGSLDSHLFK----ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN----FNAKIGD  496 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~----~~~kl~D  496 (645)
                      +|++||.+. +|+..++-    ..+.++......|+.||+.|+.|||+   .-|+||||||.|||+..+    |.+||+|
T Consensus       104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaD  179 (438)
T KOG0666|consen  104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIAD  179 (438)
T ss_pred             EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeec
Confidence            999999965 67776652    23578999999999999999999999   679999999999999776    8999999


Q ss_pred             ccCcccccccCCc--ceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCC------CchhHHH
Q 042831          497 FGLARLVEHAKGS--QTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQ------GQVSLLQ  567 (645)
Q Consensus       497 fGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~------~~~~l~~  567 (645)
                      +|+++++...-..  ....++-|.+|.|||.+.+. .||++.|||+.||++.||++-++-|......      -+.+.++
T Consensus       180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~  259 (438)
T KOG0666|consen  180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD  259 (438)
T ss_pred             ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence            9999988643322  22335678999999998875 4999999999999999999999888654421      2334445


Q ss_pred             HHHHHhcCCccccccCccccCCC------------CHH----H-------HHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          568 WVWDLYGNGKLLEAVDPRLCRDF------------DGQ----Q-------IERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       568 ~~~~~~~~~~l~~~~d~~l~~~~------------~~~----~-------~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .+++..+-..-.++-+-.-.+++            +.-    .       ....+.|..++|+.||.+|.|++|++++..
T Consensus       260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~y  339 (438)
T KOG0666|consen  260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPY  339 (438)
T ss_pred             HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccc
Confidence            55555443222111110000000            000    0       012566788999999999999999999998


Q ss_pred             cC-CCCCCCCCCC
Q 042831          625 FE-APLPALPPKM  636 (645)
Q Consensus       625 ~~-~~~p~~p~~~  636 (645)
                      |. .++|+.|.+.
T Consensus       340 F~~d~lpp~pt~~  352 (438)
T KOG0666|consen  340 FTEDPLPPLPTSD  352 (438)
T ss_pred             cccCCCCCCcccc
Confidence            75 5677665443

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-34  Score=307.36  Aligned_cols=202  Identities=34%  Similarity=0.490  Sum_probs=175.6

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC------eEEE
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK------ELLL  426 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~------~~~l  426 (645)
                      +...+.||+|+||.||+|+++.+|+.||||.++.. .....+...+|+++|++++|+|||++++.-+...      ...+
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            34567899999999999999999999999998764 3345567789999999999999999999765443      5699


Q ss_pred             EEEecCCCChhhhhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC--C--CCcEEEeeccCc
Q 042831          427 VYEFMPNGSLDSHLFKE--NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD--S--NFNAKIGDFGLA  500 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld--~--~~~~kl~DfGla  500 (645)
                      |||||.+|||+..|.+.  ..-|++...+.+..++..||.|||+   .+|+||||||.||++-  +  .-.-||+|||.|
T Consensus        95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A  171 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA  171 (732)
T ss_pred             EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence            99999999999999753  4579999999999999999999998   9999999999999983  2  334799999999


Q ss_pred             ccccccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCC
Q 042831          501 RLVEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQ  560 (645)
Q Consensus       501 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~  560 (645)
                      +.++.  +.....++||..|++||.+.. +.++...|.|||||++||++||..||.+....
T Consensus       172 rel~d--~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p  230 (732)
T KOG4250|consen  172 RELDD--NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP  230 (732)
T ss_pred             ccCCC--CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence            97654  447778899999999999984 88999999999999999999999999865543

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-33  Score=284.32  Aligned_cols=244  Identities=27%  Similarity=0.351  Sum_probs=199.7

Q ss_pred             cCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCCh
Q 042831          360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL  436 (645)
Q Consensus       360 LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL  436 (645)
                      ||+|+||.||++....+++.+++|.+....   ......+..|++++++++|+|++++++.+..++..++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            699999999999998889999999987542   23556888999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeeccc
Q 042831          437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG  516 (645)
Q Consensus       437 ~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~g  516 (645)
                      .+++... ..+++.....++.|+++||.|||+   .+++|+||+|+||+++.++.++|+|||++....... .......+
T Consensus        81 ~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~  155 (250)
T cd05123          81 FSHLSKE-GRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFCG  155 (250)
T ss_pred             HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCcC
Confidence            9998654 368999999999999999999998   999999999999999999999999999987654322 22334567


Q ss_pred             CccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHH
Q 042831          517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIE  596 (645)
Q Consensus       517 t~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~  596 (645)
                      +..|++||...+...+.++|+||||+++|||++|+.||.....   ......+    .++.      ..+..    ....
T Consensus       156 ~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~----~~~~------~~~~~----~~~~  218 (250)
T cd05123         156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEIYEKI----LKDP------LRFPE----FLSP  218 (250)
T ss_pred             CccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHH----hcCC------CCCCC----CCCH
Confidence            8899999999888899999999999999999999999964432   1111111    1111      11111    1134


Q ss_pred             HHHHHHHHcCCCCCCCCCCH---HHHHHHhcc
Q 042831          597 RLMIVGLWCAHPDENLRPSI---RQVIHVLNF  625 (645)
Q Consensus       597 ~l~~l~~~Cl~~dP~~RPs~---~evl~~L~~  625 (645)
                      .+.+++..|+..||++||++   ++++.+.++
T Consensus       219 ~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         219 EARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             HHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence            56788899999999999999   788877654

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=7.1e-34  Score=301.90  Aligned_cols=265  Identities=22%  Similarity=0.301  Sum_probs=203.7

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe----
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE----  423 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~----  423 (645)
                      ..++|...+.||+|++|.||+|++..+++.||+|++...  .....+.+.+|+.++++++|+|++++++++...+.    
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            456788899999999999999999988999999988643  23345677889999999999999999988765554    


Q ss_pred             --EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          424 --LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       424 --~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                        .++|+||+ +++|.+++..  ..+++..+..++.|+++||.|||+   .+++||||||+||++++++.+||+|||++.
T Consensus        93 ~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~~~  166 (343)
T cd07851          93 QDVYLVTHLM-GADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGLAR  166 (343)
T ss_pred             ccEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEccccccc
Confidence              89999998 6799888754  468999999999999999999998   899999999999999999999999999997


Q ss_pred             cccccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc------
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG------  574 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~------  574 (645)
                      .....    .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......   ......+..+      
T Consensus       167 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~---~~~~i~~~~~~~~~~~  239 (343)
T cd07851         167 HTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID---QLKRIMNLVGTPDEEL  239 (343)
T ss_pred             ccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHhcCCCCHHH
Confidence            65332    233457888999998865 367899999999999999999999997543221   1111111100      


Q ss_pred             -----CCccccc---cCccccCCCC---HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          575 -----NGKLLEA---VDPRLCRDFD---GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       575 -----~~~l~~~---~d~~l~~~~~---~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                           .......   +...-...+.   ......+.+++.+|++++|++|||+.|++++.++..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~  303 (343)
T cd07851         240 LQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAE  303 (343)
T ss_pred             HhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccc
Confidence                 0000000   0000000000   012456788999999999999999999999998763

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-34  Score=258.32  Aligned_cols=271  Identities=24%  Similarity=0.292  Sum_probs=206.3

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      +|...++||+|.+|+||+|+..++++.||+|+++.+.  +.--....+|+.++++++|+|||++++....++.+-+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            4556789999999999999999999999999987653  22345678999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      | .-+|..+...-++.++.+....++.|+++||.|+|+   +++.||||||.|.|++.||..|++|||+++.+.-.- ..
T Consensus        83 c-dqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgipv-rc  157 (292)
T KOG0662|consen   83 C-DQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-RC  157 (292)
T ss_pred             h-hHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCce-Ee
Confidence            9 557888887777889999999999999999999999   899999999999999999999999999999765322 22


Q ss_pred             eeecccCccccCccccccCC-CCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCc---cccccCcc
Q 042831          511 TTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGK---LLEAVDPR  585 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~-~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~---l~~~~d~~  585 (645)
                      ....+-|.+|.+|+++.+.+ |++..|+||-||++.|+.. |++.|...+-.++...+-|+.....+..   +...-|-.
T Consensus       158 ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk  237 (292)
T KOG0662|consen  158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYK  237 (292)
T ss_pred             eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCc
Confidence            23345689999999988765 8999999999999999998 6666765544433332322222122222   22222222


Q ss_pred             ccCCCCHH-----HH----HHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          586 LCRDFDGQ-----QI----ERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       586 l~~~~~~~-----~~----~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      ..+.++..     ..    .+=.++....+.-+|.+|.++++.+++..+...
T Consensus       238 ~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~  289 (292)
T KOG0662|consen  238 PYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF  289 (292)
T ss_pred             ccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence            22222211     01    112234445556699999999999999887644

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-35  Score=332.79  Aligned_cols=258  Identities=28%  Similarity=0.390  Sum_probs=210.6

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ..+-++....+||.|.||.||-|...++|...|+|.+...  .....+...+|..++..++|||+|+++|+-.+++..+|
T Consensus      1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred             cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence            3445777889999999999999999999999999977543  34456778899999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      .||||.+|+|.+.+. .++.+++.....+..|++.|++|||+   .+||||||||.||+||.+|.+|++|||.|..+...
T Consensus      1312 FMEyC~~GsLa~ll~-~gri~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLE-HGRIEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred             HHHHhccCcHHHHHH-hcchhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccceeEecCc
Confidence            999999999999884 45567777778889999999999999   99999999999999999999999999999877543


Q ss_pred             CC---cceeecccCccccCccccccC---CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHH-hcCCccc
Q 042831          507 KG---SQTTVLAGTMGYMAPECATTG---KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDL-YGNGKLL  579 (645)
Q Consensus       507 ~~---~~~~~~~gt~~y~aPE~~~~~---~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~-~~~~~l~  579 (645)
                      ..   .......||+-|||||++.+.   ....+.||||+|||++||+||++||...+..       |..-+ ...|.. 
T Consensus      1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-------~aIMy~V~~gh~- 1459 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-------WAIMYHVAAGHK- 1459 (1509)
T ss_pred             hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-------hHHHhHHhccCC-
Confidence            21   223456899999999998653   3567899999999999999999999755432       22211 122322 


Q ss_pred             cccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       580 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                              +.++......-.+++..||..||++|-++.|++++--.+
T Consensus      1460 --------Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1460 --------PQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred             --------CCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccc
Confidence                    222333444556788899999999999999999886543

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-33  Score=315.44  Aligned_cols=261  Identities=29%  Similarity=0.440  Sum_probs=210.6

Q ss_pred             HHHhhcCCCCCCccCcCCcEEEEEEEEcC-------CCeEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEee
Q 042831          347 LALATNDFNDDQKLGQGGFGGVYKGFFRE-------TNSYIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGW  417 (645)
Q Consensus       347 l~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~  417 (645)
                      ++...++....+.||+|.||.|++|....       ....||||.++.. .....+.+..|+++|..+ +|+|++.++|+
T Consensus       291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~  370 (609)
T KOG0200|consen  291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA  370 (609)
T ss_pred             eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence            44444555666799999999999998642       1467999998754 335678899999999998 59999999999


Q ss_pred             eeeCCeEEEEEEecCCCChhhhhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCC
Q 042831          418 CHEKKELLLVYEFMPNGSLDSHLFKEN---------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS  482 (645)
Q Consensus       418 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~  482 (645)
                      |..++..++|+||+..|+|.++|...+               ..++....+.++.|||.|++||++   .+++||||.++
T Consensus       371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaR  447 (609)
T KOG0200|consen  371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAAR  447 (609)
T ss_pred             eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhh
Confidence            999999999999999999999997665               348999999999999999999999   89999999999


Q ss_pred             CeEECCCCcEEEeeccCcccccccCCcceeeccc--CccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCC
Q 042831          483 NIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG--TMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAP  559 (645)
Q Consensus       483 NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~  559 (645)
                      |||+.++..+||+|||+++...+........-.+  ...|||||.+....++.+||||||||+|||+.+ |..|+.....
T Consensus       448 NVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~  527 (609)
T KOG0200|consen  448 NVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP  527 (609)
T ss_pred             hEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc
Confidence            9999999999999999999655444333222222  446999999999999999999999999999999 8999975221


Q ss_pred             CCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          560 QGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       560 ~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .      .-+++..++|...+.  |..       ...++..+++.||+.+|++||++.|+++.+..
T Consensus       528 ~------~~l~~~l~~G~r~~~--P~~-------c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~  578 (609)
T KOG0200|consen  528 T------EELLEFLKEGNRMEQ--PEH-------CSDEIYDLMKSCWNADPEDRPTFSECVEFFEK  578 (609)
T ss_pred             H------HHHHHHHhcCCCCCC--CCC-------CCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence            1      112334455544322  222       23466788899999999999999999998876

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=2.4e-33  Score=296.37  Aligned_cols=265  Identities=24%  Similarity=0.273  Sum_probs=197.6

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCC--CeEEEEEEeccC--ChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeC----Ce
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRET--NSYIAVKRVSQG--SKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEK----KE  423 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~--~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~----~~  423 (645)
                      +|...+.||+|+||.||++....+  +..||+|++...  .....+.+.+|++++.+++ ||||+++++.+...    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            467788999999999999999877  889999998643  2234567889999999994 99999999875432    45


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      .++++||+. ++|.+++.. ...+++..+..++.||+.||.|||+   .+++||||||+|||++.++.+||+|||+++..
T Consensus        81 ~~~~~e~~~-~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~  155 (332)
T cd07857          81 LYLYEELME-ADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLARGF  155 (332)
T ss_pred             EEEEEeccc-CCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence            788899885 688888743 4568999999999999999999998   89999999999999999999999999999865


Q ss_pred             cccCCc---ceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc-----
Q 042831          504 EHAKGS---QTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG-----  574 (645)
Q Consensus       504 ~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~-----  574 (645)
                      ......   ......|+..|+|||.+.+ ..++.++|+|||||++++|++|+.||......   ..........+     
T Consensus       156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~  232 (332)
T cd07857         156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV---DQLNQILQVLGTPDEE  232 (332)
T ss_pred             ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH---HHHHHHHHHhCCCCHH
Confidence            432211   1223468899999998765 46899999999999999999999999754321   11111111000     


Q ss_pred             ------CCcccc---cc---C-ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          575 ------NGKLLE---AV---D-PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       575 ------~~~l~~---~~---d-~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                            ......   ..   . ..+. .........+..++.+|++.||++|||+.+++.+.+..
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~  296 (332)
T cd07857         233 TLSRIGSPKAQNYIRSLPNIPKKPFE-SIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLA  296 (332)
T ss_pred             HHHhhhhhhHHHHHHhccccCCcchH-hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhh
Confidence                  000000   00   0 0000 00001124677889999999999999999999998864

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=7.9e-33  Score=278.09  Aligned_cols=228  Identities=20%  Similarity=0.166  Sum_probs=182.5

Q ss_pred             CCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCChhhhhhh
Q 042831          363 GGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK  442 (645)
Q Consensus       363 G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~  442 (645)
                      |.+|.||++++..+++.+|+|++....     .+..|...+....|||++++++++.+.+..++||||+++|+|.+++.+
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            899999999999999999999986543     233455555566799999999999999999999999999999998865


Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeecccCccccC
Q 042831          443 ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA  522 (645)
Q Consensus       443 ~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~a  522 (645)
                      . ..+++..+..++.|+++||.|||+   ++++||||||+||+++.++.++++|||.+......    .....++..|+|
T Consensus        79 ~-~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~a  150 (237)
T cd05576          79 F-LNIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMYCA  150 (237)
T ss_pred             h-cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCccccC
Confidence            4 358999999999999999999998   89999999999999999999999999987654332    122345677999


Q ss_pred             ccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHH
Q 042831          523 PECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVG  602 (645)
Q Consensus       523 PE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~  602 (645)
                      ||.+....++.++||||+|++++||++|+.|+........             ..    ....+..    .....+..++
T Consensus       151 PE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~-------------~~----~~~~~~~----~~~~~~~~li  209 (237)
T cd05576         151 PEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN-------------TH----TTLNIPE----WVSEEARSLL  209 (237)
T ss_pred             CcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc-------------cc----cccCCcc----cCCHHHHHHH
Confidence            9999888899999999999999999999988753221100             00    0001111    1224567788


Q ss_pred             HHcCCCCCCCCCCH-----HHHHHHhc
Q 042831          603 LWCAHPDENLRPSI-----RQVIHVLN  624 (645)
Q Consensus       603 ~~Cl~~dP~~RPs~-----~evl~~L~  624 (645)
                      .+|++.||++||++     ++++.|.+
T Consensus       210 ~~~l~~dp~~R~~~~~~~~~~~~~h~~  236 (237)
T cd05576         210 QQLLQFNPTERLGAGVAGVEDIKSHPF  236 (237)
T ss_pred             HHHccCCHHHhcCCCccchHHHHcCCC
Confidence            99999999999996     77777655

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=1.6e-32  Score=314.71  Aligned_cols=146  Identities=25%  Similarity=0.416  Sum_probs=133.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...++||+|+||.||+|.+..+++.||||++...   .......+..|+.++..++|+||+++++++...+..++||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            5788899999999999999999988999999998653   2334567889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      ||+++++|.+++... ..+++...+.|+.||+.||.|||.   .+|+||||||+|||++.++.+||+|||+++
T Consensus        84 Ey~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          84 EYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             eCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            999999999988543 468899999999999999999998   899999999999999999999999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-34  Score=277.20  Aligned_cols=254  Identities=27%  Similarity=0.347  Sum_probs=199.9

Q ss_pred             CCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-hhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEEecC
Q 042831          355 NDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-QGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMP  432 (645)
Q Consensus       355 ~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~Ey~~  432 (645)
                      +.+..||.|+||+|+|-.++.+|+..|||+++.... ...++++.|.+...+- ++||||+++|.+..++..++.||.| 
T Consensus        67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-  145 (361)
T KOG1006|consen   67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-  145 (361)
T ss_pred             HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-
Confidence            336689999999999999999999999999987643 6678899999877665 6899999999999999999999999 


Q ss_pred             CCChhhhhhh----cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          433 NGSLDSHLFK----ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       433 ~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ..||+.+...    .+..+++...-+|......||.||.++  ..|||||+||+|||||..|.+||||||.+..+..+  
T Consensus       146 d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S--  221 (361)
T KOG1006|consen  146 DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS--  221 (361)
T ss_pred             hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhHHHH--
Confidence            6677765432    456799999999999999999999984  67999999999999999999999999998654321  


Q ss_pred             cceeecccCccccCccccccC--CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          509 SQTTVLAGTMGYMAPECATTG--KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~--~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                      -..+.-+|...|||||.+...  .++-+|||||||+.|+|++||+-|+.....     +.+.+.... .|.-     |.+
T Consensus       222 iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-----vfeql~~Vv-~gdp-----p~l  290 (361)
T KOG1006|consen  222 IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-----VFEQLCQVV-IGDP-----PIL  290 (361)
T ss_pred             HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-----HHHHHHHHH-cCCC-----Cee
Confidence            223345688899999988543  489999999999999999999999974331     222222221 2221     222


Q ss_pred             cCCCC-HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          587 CRDFD-GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       587 ~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ..... .+....+..++-.|+-+|-.+||+..+++++.-
T Consensus       291 ~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~f  329 (361)
T KOG1006|consen  291 LFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPF  329 (361)
T ss_pred             cCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCch
Confidence            22111 234456778888999999999999999987653

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-33  Score=311.98  Aligned_cols=268  Identities=25%  Similarity=0.319  Sum_probs=215.8

Q ss_pred             ccChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEee
Q 042831          341 RFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGW  417 (645)
Q Consensus       341 ~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~  417 (645)
                      .-...+++...++|.+.+.||+|+||.|..++++.+++.+|+|++++.   .+....-|..|-.+|.--+.+=|++++-.
T Consensus        64 v~~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA  143 (1317)
T KOG0612|consen   64 VKKVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA  143 (1317)
T ss_pred             HHHHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH
Confidence            344578888889999999999999999999999999999999999763   23445678899999998889999999999


Q ss_pred             eeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeec
Q 042831          418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF  497 (645)
Q Consensus       418 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~Df  497 (645)
                      |++++++|+|||||+||+|..++.+.. .+++...+-++..|.-||.-||+   .|+|||||||+|||||..|++||+||
T Consensus       144 FQD~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikLADF  219 (1317)
T KOG0612|consen  144 FQDERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKLADF  219 (1317)
T ss_pred             hcCccceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEeeccc
Confidence            999999999999999999999997666 89999999999999999999998   99999999999999999999999999


Q ss_pred             cCcccccccCCcceeecccCccccCcccccc-----CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHH
Q 042831          498 GLARLVEHAKGSQTTVLAGTMGYMAPECATT-----GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDL  572 (645)
Q Consensus       498 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~  572 (645)
                      |.+-.++....-.....+|||.|++||++..     +.|++.+|.||+||++|||+.|..||..+.      ++.-....
T Consensus       220 GsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads------lveTY~KI  293 (1317)
T KOG0612|consen  220 GSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS------LVETYGKI  293 (1317)
T ss_pred             hhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH------HHHHHHHH
Confidence            9998777555556667889999999999852     568999999999999999999999997432      22211111


Q ss_pred             hcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHhccC
Q 042831          573 YGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPS---IRQVIHVLNFE  626 (645)
Q Consensus       573 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~evl~~L~~~  626 (645)
                      .........-+       +.+..+....|+.+.+. +|+.|-.   .+++..|+.|.
T Consensus       294 m~hk~~l~FP~-------~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~  342 (1317)
T KOG0612|consen  294 MNHKESLSFPD-------ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFE  342 (1317)
T ss_pred             hchhhhcCCCc-------ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCcccc
Confidence            11111111110       01123344455555443 7778887   99999999985

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.98  E-value=4.5e-32  Score=303.79  Aligned_cols=265  Identities=21%  Similarity=0.236  Sum_probs=177.6

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCC----CeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEee------ee
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRET----NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW------CH  419 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~----~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~------~~  419 (645)
                      ..++|...++||+|+||.||+|++..+    +..||+|++......  +....|  .+.+..+.++..++..      +.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            567899999999999999999999988    899999987643221  111111  1111222222222111      34


Q ss_pred             eCCeEEEEEEecCCCChhhhhhhcCCC-------------------CCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCC
Q 042831          420 EKKELLLVYEFMPNGSLDSHLFKENSL-------------------LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIK  480 (645)
Q Consensus       420 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~-------------------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk  480 (645)
                      .+...++||||+++++|.+++......                   ..+..+..++.||+.||.|||+   ++|+|||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLK  282 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVK  282 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCC
Confidence            567899999999999999888643211                   1233456799999999999998   899999999


Q ss_pred             CCCeEECC-CCcEEEeeccCcccccccCCcceeecccCccccCccccccC----------------------CCCcchhH
Q 042831          481 SSNIMLDS-NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG----------------------KASKESDV  537 (645)
Q Consensus       481 p~NILld~-~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~t~~sDV  537 (645)
                      |+|||+++ ++.+||+|||+++.+............+++.|+|||.+...                      .++.++||
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV  362 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI  362 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence            99999985 68999999999986654444444556789999999965322                      23446799


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC----ccccccCccc----cCCCC--HHHHHHHHHHHHHcCC
Q 042831          538 YSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG----KLLEAVDPRL----CRDFD--GQQIERLMIVGLWCAH  607 (645)
Q Consensus       538 ~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~----~l~~~~d~~l----~~~~~--~~~~~~l~~l~~~Cl~  607 (645)
                      |||||+||||+++..+++..       +......+...+    .+...+++..    ...++  ........+|+.+||+
T Consensus       363 wSlGviL~el~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~  435 (566)
T PLN03225        363 YSAGLIFLQMAFPNLRSDSN-------LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMR  435 (566)
T ss_pred             HHHHHHHHHHHhCcCCCchH-------HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHcc
Confidence            99999999999977664321       111110000000    0001111111    00000  0011234478899999


Q ss_pred             CCCCCCCCHHHHHHHhccCCC
Q 042831          608 PDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       608 ~dP~~RPs~~evl~~L~~~~~  628 (645)
                      .||++|||++|+++|.++...
T Consensus       436 ~dP~kR~ta~e~L~Hpff~~~  456 (566)
T PLN03225        436 FKGRQRISAKAALAHPYFDRE  456 (566)
T ss_pred             CCcccCCCHHHHhCCcCcCCC
Confidence            999999999999999998653

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.98  E-value=8e-33  Score=268.65  Aligned_cols=254  Identities=23%  Similarity=0.283  Sum_probs=201.7

Q ss_pred             hhcCCCC-CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeee----CCe
Q 042831          350 ATNDFND-DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHE----KKE  423 (645)
Q Consensus       350 ~~~~f~~-~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~----~~~  423 (645)
                      .+++|.+ .++||-|-.|+|-.+.++.+++.+|+|.+...     ...++|+++--+. .|||||++++.+.+    ...
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence            3455554 36799999999999999999999999988543     3346788877665 59999999998753    567


Q ss_pred             EEEEEEecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC---CCcEEEeeccC
Q 042831          424 LLLVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGL  499 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~---~~~~kl~DfGl  499 (645)
                      +++|||.|+||.|...+.+++ ..+++.+...|++||+.|+.|||.   .+|.||||||+|+|...   |-.+||+|||+
T Consensus       134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtDfGF  210 (400)
T KOG0604|consen  134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTDFGF  210 (400)
T ss_pred             eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEeccccc
Confidence            899999999999999997654 579999999999999999999999   99999999999999964   55699999999


Q ss_pred             cccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccc
Q 042831          500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL  579 (645)
Q Consensus       500 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~  579 (645)
                      |+....  .......+-|+.|.|||++...+|+...|+||+||++|-|+||.+||........   ..-+...++.|.. 
T Consensus       211 AK~t~~--~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai---spgMk~rI~~gqy-  284 (400)
T KOG0604|consen  211 AKETQE--PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI---SPGMKRRIRTGQY-  284 (400)
T ss_pred             ccccCC--CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC---ChhHHhHhhccCc-
Confidence            986543  2334456789999999999999999999999999999999999999986543211   1111111111111 


Q ss_pred             cccCccccCCCCHH----HHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          580 EAVDPRLCRDFDGQ----QIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       580 ~~~d~~l~~~~~~~----~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                               +|+.+    ..+...++++.+|..+|.+|-|+.|++.+.|-.
T Consensus       285 ---------~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~  326 (400)
T KOG0604|consen  285 ---------EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWIN  326 (400)
T ss_pred             ---------cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhc
Confidence                     22222    245667788999999999999999999999854

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.98  E-value=1.8e-32  Score=291.85  Aligned_cols=244  Identities=25%  Similarity=0.299  Sum_probs=198.6

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      +..|.....+|.|+|+.|-++.+..+++..++|++.+...    +-.+|+.++... +|||++++.+.+.+..+.++|||
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            5678888889999999999999999999999999976521    223577666655 69999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE-CCCCcEEEeeccCcccccccCC
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl-d~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ++.++-|.+.+.....  ....+..|+.+|+.++.|||+   ++|+||||||+|||+ ++.++++|+|||.++.....  
T Consensus       397 ~l~g~ell~ri~~~~~--~~~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~--  469 (612)
T KOG0603|consen  397 LLDGGELLRRIRSKPE--FCSEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS--  469 (612)
T ss_pred             hccccHHHHHHHhcch--hHHHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCchh--
Confidence            9999988877754332  226777899999999999999   999999999999999 58999999999999876543  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                        ....+-|..|.|||++....+++++|+||||++||+|++|+.||.....+  ..+.    ..+..++           
T Consensus       470 --~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei~----~~i~~~~-----------  530 (612)
T KOG0603|consen  470 --CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEIH----TRIQMPK-----------  530 (612)
T ss_pred             --hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHHH----HhhcCCc-----------
Confidence              22345688999999999989999999999999999999999999855433  1111    1112221           


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                       +.........+|+.+||+.||.+||+|.++..+.|+
T Consensus       531 -~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  531 -FSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             -cccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence             222334456678899999999999999999999998

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.98  E-value=8.9e-32  Score=268.86  Aligned_cols=242  Identities=26%  Similarity=0.361  Sum_probs=197.2

Q ss_pred             CcEEEEEEEEcCCCeEEEEEEeccCChhh-HHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCChhhhhhh
Q 042831          364 GFGGVYKGFFRETNSYIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK  442 (645)
Q Consensus       364 ~fG~Vy~g~~~~~~~~vavK~~~~~~~~~-~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~  442 (645)
                      +||.||+|...++++.+++|++....... .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            58999999999889999999997665444 68899999999999999999999999999999999999999999998865


Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeecccCccccC
Q 042831          443 ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA  522 (645)
Q Consensus       443 ~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~a  522 (645)
                      ... +++..++.++.+++.++.|||+   .+++|+||+|+||++++++.++|+|||.+.......  ......++..|++
T Consensus        81 ~~~-~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~  154 (244)
T smart00220       81 RGR-LSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYMA  154 (244)
T ss_pred             ccC-CCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCCC
Confidence            433 8999999999999999999999   899999999999999999999999999998765432  3334567889999


Q ss_pred             ccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHH
Q 042831          523 PECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVG  602 (645)
Q Consensus       523 PE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~  602 (645)
                      ||.+.....+.++|||+||++++|+++|+.||.....  .....++    ...+.....       .........+.+++
T Consensus       155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~--~~~~~~~----~~~~~~~~~-------~~~~~~~~~~~~~i  221 (244)
T smart00220      155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ--LLELFKK----IGKPKPPFP-------PPEWKISPEAKDLI  221 (244)
T ss_pred             HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHH----HhccCCCCc-------cccccCCHHHHHHH
Confidence            9999888899999999999999999999999975321  1112221    111111100       00000234677889


Q ss_pred             HHcCCCCCCCCCCHHHHHHHhc
Q 042831          603 LWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       603 ~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .+|+..+|++||++.+++++.+
T Consensus       222 ~~~l~~~p~~Rp~~~~~~~~~~  243 (244)
T smart00220      222 RKLLVKDPEKRLTAEEALQHPF  243 (244)
T ss_pred             HHHccCCchhccCHHHHhhCCC
Confidence            9999999999999999998654

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.98  E-value=4.8e-33  Score=279.08  Aligned_cols=270  Identities=20%  Similarity=0.285  Sum_probs=212.7

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCC--C----CccEEEeeeeeCCe
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH--R----NLVQLLGWCHEKKE  423 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H--~----nlv~l~~~~~~~~~  423 (645)
                      .+++|.+..++|+|.||.|-.+.+.+++..||||+++.-. ...+..+-|++++.++.+  |    -.|++.+|+.-.++
T Consensus        87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh  165 (415)
T KOG0671|consen   87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH  165 (415)
T ss_pred             cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence            3788999999999999999999999999999999986443 334556679999999943  2    36888999999999


Q ss_pred             EEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC--------------
Q 042831          424 LLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS--------------  488 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~--------------  488 (645)
                      .|||+|.+ |-|+.++|..+ -..++..++..|+.|++++++|||+   ..++|.||||+|||+.+              
T Consensus       166 iCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~~k~~~~  241 (415)
T KOG0671|consen  166 ICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYNPKKKVC  241 (415)
T ss_pred             eEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEeccCCccc
Confidence            99999998 77899999764 3578999999999999999999999   99999999999999832              


Q ss_pred             ------CCcEEEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc
Q 042831          489 ------NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ  562 (645)
Q Consensus       489 ------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~  562 (645)
                            +..+||.|||.|..-...    ....+.|..|.|||++.+-.++.++||||+||+|.|+.+|...|+..+..+.
T Consensus       242 ~~r~~ks~~I~vIDFGsAtf~~e~----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EH  317 (415)
T KOG0671|consen  242 FIRPLKSTAIKVIDFGSATFDHEH----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEH  317 (415)
T ss_pred             eeccCCCcceEEEecCCcceeccC----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHH
Confidence                  345899999999764322    2456789999999999999999999999999999999999999986654443


Q ss_pred             hhHHHHH--------------HHHhcCCccc-----------cccCc----cccCCCCHHHHHHHHHHHHHcCCCCCCCC
Q 042831          563 VSLLQWV--------------WDLYGNGKLL-----------EAVDP----RLCRDFDGQQIERLMIVGLWCAHPDENLR  613 (645)
Q Consensus       563 ~~l~~~~--------------~~~~~~~~l~-----------~~~d~----~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R  613 (645)
                      ..+++.+              ..+...|.+.           ...++    ...-.....+...+.+|+..+|..||.+|
T Consensus       318 LaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~R  397 (415)
T KOG0671|consen  318 LAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARR  397 (415)
T ss_pred             HHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccc
Confidence            3333221              1111112110           01110    00112344677889999999999999999


Q ss_pred             CCHHHHHHHhccCCC
Q 042831          614 PSIRQVIHVLNFEAP  628 (645)
Q Consensus       614 Ps~~evl~~L~~~~~  628 (645)
                      +|++|+++|..|...
T Consensus       398 iTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  398 ITLREALSHPFFARL  412 (415)
T ss_pred             ccHHHHhcCHHhhcC
Confidence            999999999998754

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.98  E-value=1.4e-31  Score=292.96  Aligned_cols=264  Identities=21%  Similarity=0.276  Sum_probs=185.6

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEc----------------CCCeEEEEEEeccCChhhHHH--------------HHHH
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFR----------------ETNSYIAVKRVSQGSKQGIKE--------------YASE  399 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E  399 (645)
                      ..++|.+.++||+|+||.||+|.+.                ..++.||||++........++              ...|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            4678999999999999999999752                234679999986544333333              3347


Q ss_pred             HHHHHhcCCCCc-----cEEEeeeee--------CCeEEEEEEecCCCChhhhhhhcC----------------------
Q 042831          400 VKIISRLRHRNL-----VQLLGWCHE--------KKELLLVYEFMPNGSLDSHLFKEN----------------------  444 (645)
Q Consensus       400 i~~l~~l~H~nl-----v~l~~~~~~--------~~~~~lV~Ey~~~gsL~~~l~~~~----------------------  444 (645)
                      +.++.+++|.++     ++++++|..        ++..+|||||+++++|.++++...                      
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777888877654     677888753        356899999999999999886321                      


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeecccCccccCc
Q 042831          445 -SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAP  523 (645)
Q Consensus       445 -~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aP  523 (645)
                       ..++|..+..++.|++++|.|||+   .+|+||||||+|||++.++.+||+|||+++..............+++.|+||
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP  379 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP  379 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence             134678889999999999999998   8999999999999999999999999999976543322222223457899999


Q ss_pred             cccccCCC----------------------CcchhHHHHHHHHHHHHcCCC-CCCCCCCCC------chhHHHHHHHHhc
Q 042831          524 ECATTGKA----------------------SKESDVYSFGIVALEIACGRK-PINPKAPQG------QVSLLQWVWDLYG  574 (645)
Q Consensus       524 E~~~~~~~----------------------t~~sDV~SfGvll~elltG~~-pf~~~~~~~------~~~l~~~~~~~~~  574 (645)
                      |.+.....                      ..+.||||+||+++||++|.. |+.......      ...+..  |..+.
T Consensus       380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~--~r~~~  457 (507)
T PLN03224        380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNR--WRMYK  457 (507)
T ss_pred             hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHH--HHhhc
Confidence            98754321                      134699999999999999885 665321100      011111  22221


Q ss_pred             CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCC---CCCCCHHHHHHHhccC
Q 042831          575 NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDE---NLRPSIRQVIHVLNFE  626 (645)
Q Consensus       575 ~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP---~~RPs~~evl~~L~~~  626 (645)
                      ....    +-...    ........+++.+|+..+|   .+|+|++|+++|.|+.
T Consensus       458 ~~~~----~~~~~----d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~  504 (507)
T PLN03224        458 GQKY----DFSLL----DRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFL  504 (507)
T ss_pred             ccCC----Ccccc----cccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcC
Confidence            1111    10011    1112345566677777655   7899999999999984

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.98  E-value=6.4e-33  Score=285.89  Aligned_cols=249  Identities=24%  Similarity=0.328  Sum_probs=203.0

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCC
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNG  434 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~g  434 (645)
                      .+.||+|.||+||-|+++.+|+.||||.+.+.  ..+...++++|+.+|..++||.||.+...|+..+..++|||-+.+.
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD  648 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD  648 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence            57899999999999999999999999998754  4455688999999999999999999999999999999999999655


Q ss_pred             ChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC---CcEEEeeccCcccccccCCcce
Q 042831          435 SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN---FNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       435 sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~---~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      -|.-.|....+.|++..-.-++.||+.||.|||.   ++|+|+||||+||||...   -++||||||.|++.....  -.
T Consensus       649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks--FR  723 (888)
T KOG4236|consen  649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS--FR  723 (888)
T ss_pred             HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhh--hh
Confidence            5555565667889999999999999999999999   999999999999999643   369999999999876433  33


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ..++||+.|+|||+++++.|...-|+||.||++|--++|.-||..+.+  ..+.++       +-..  +..+.--.   
T Consensus       724 rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd--IndQIQ-------NAaF--MyPp~PW~---  789 (888)
T KOG4236|consen  724 RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED--INDQIQ-------NAAF--MYPPNPWS---  789 (888)
T ss_pred             hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc--hhHHhh-------cccc--ccCCCchh---
Confidence            457899999999999999999999999999999999999999975432  122221       1111  11111111   


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          592 GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                       +.....++++...|+..-++|-|..+.+.|.|-
T Consensus       790 -eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wl  822 (888)
T KOG4236|consen  790 -EISPEAIDLINNLLQVKMRKRYSVDKSLSHPWL  822 (888)
T ss_pred             -hcCHHHHHHHHHHHHHHHHHhcchHhhccchhh
Confidence             222445677777888899999999999988874

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.98  E-value=3.1e-32  Score=272.63  Aligned_cols=262  Identities=25%  Similarity=0.319  Sum_probs=209.9

Q ss_pred             hHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCC-----CeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEee
Q 042831          344 YKELALATNDFNDDQKLGQGGFGGVYKGFFRET-----NSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGW  417 (645)
Q Consensus       344 ~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~-----~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~  417 (645)
                      .+++....+++....++.+|.||.||+|.+++.     .+.|-+|.++.. +.-+...++.|...+..+.|||+.++.+.
T Consensus       276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V  355 (563)
T KOG1024|consen  276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV  355 (563)
T ss_pred             HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence            456777778899999999999999999988653     245677777654 55567788999999999999999999999


Q ss_pred             eeeC-CeEEEEEEecCCCChhhhhhh-----c--CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC
Q 042831          418 CHEK-KELLLVYEFMPNGSLDSHLFK-----E--NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN  489 (645)
Q Consensus       418 ~~~~-~~~~lV~Ey~~~gsL~~~l~~-----~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~  489 (645)
                      +.++ ...+.+|.++.-|+|..+|..     .  .+.++..+...++.|++.|++|||.   .+|||.||..+|.++|+.
T Consensus       356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~  432 (563)
T KOG1024|consen  356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQ  432 (563)
T ss_pred             EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehhh
Confidence            8765 467899999999999999972     1  2467888899999999999999999   999999999999999999


Q ss_pred             CcEEEeeccCcccccccCCccee-ecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHH
Q 042831          490 FNAKIGDFGLARLVEHAKGSQTT-VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQ  567 (645)
Q Consensus       490 ~~~kl~DfGla~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~  567 (645)
                      .++||+|=.++|.+-..++.... .......||+||.+.+..++.++|||||||+||||+| |+.|+...++.+      
T Consensus       433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE------  506 (563)
T KOG1024|consen  433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE------  506 (563)
T ss_pred             eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH------
Confidence            99999999999876555443322 1234568999999999999999999999999999998 999998655432      


Q ss_pred             HHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          568 WVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       568 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                       +..+..+|...  ..|.-       ...++..++.-||..+|++||+.+|++.-|.
T Consensus       507 -m~~ylkdGyRl--aQP~N-------CPDeLf~vMacCWallpeeRPsf~Qlv~cLs  553 (563)
T KOG1024|consen  507 -MEHYLKDGYRL--AQPFN-------CPDELFTVMACCWALLPEERPSFSQLVICLS  553 (563)
T ss_pred             -HHHHHhcccee--cCCCC-------CcHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence             22233344221  11221       2345666777899999999999999999885

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.6e-33  Score=267.29  Aligned_cols=271  Identities=24%  Similarity=0.347  Sum_probs=206.2

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hh-hHHHHHHHHHHHHhcCCCCccEEEeeeee--------CC
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQ-GIKEYASEVKIISRLRHRNLVQLLGWCHE--------KK  422 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~-~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~--------~~  422 (645)
                      .|....++|+|.||.||+++.+.+|+.||+|++-.++ ++ .-...++|+.+|..++|+|++.+++.|..        ..
T Consensus        18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~   97 (376)
T KOG0669|consen   18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA   97 (376)
T ss_pred             HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence            4555778999999999999999999999999764432 22 23456789999999999999999999853        34


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      .+++||++|+. +|.-.|......++...+.++++++..||.|+|.   ..|+|||+|+.|+|++.++.+||+|||+++.
T Consensus        98 t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGlar~  173 (376)
T KOG0669|consen   98 TFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGLARA  173 (376)
T ss_pred             eeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeeccccccc
Confidence            58999999954 7777776666789999999999999999999998   8999999999999999999999999999987


Q ss_pred             ccccCC---cceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC---
Q 042831          503 VEHAKG---SQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN---  575 (645)
Q Consensus       503 ~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~---  575 (645)
                      +.....   ...+..+-|.+|++||.+.+ ..++++.|||.-||++.||++|.+-++...+..+..++.....-+..   
T Consensus       174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevW  253 (376)
T KOG0669|consen  174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVW  253 (376)
T ss_pred             eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccC
Confidence            754433   22344566999999998766 56999999999999999999999888776655444333322111111   


Q ss_pred             -----Ccccccc-------------CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC-CCC
Q 042831          576 -----GKLLEAV-------------DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA-PLP  630 (645)
Q Consensus       576 -----~~l~~~~-------------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~-~~p  630 (645)
                           -.+.+.+             ..++.+...+   ...++|+..++..||.+|+.+.+++.|-+|.. |.|
T Consensus       254 P~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd---~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p  324 (376)
T KOG0669|consen  254 PNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKD---DEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP  324 (376)
T ss_pred             CCcccchHHHhccCCCCCcchhhhhhhhcccccCC---hhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence                 1111111             1111111111   14556667788999999999999999998764 444

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4.9e-32  Score=272.45  Aligned_cols=245  Identities=24%  Similarity=0.353  Sum_probs=195.2

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCe
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKE  423 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~  423 (645)
                      .....+|+...+||+|+||+|.++..+++.+.+|||+++++-   ..+.+--+.|-++|.-. +-|.+++++.+++.-+.
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR  424 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR  424 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence            344568999999999999999999999999999999987652   11222223455666554 46899999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      +++||||+.+|+|--++++- +.+.++...-.+..||-||-+||+   ++||.||||..|||||.+|++||+|||+++.-
T Consensus       425 LyFVMEyvnGGDLMyhiQQ~-GkFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn  500 (683)
T KOG0696|consen  425 LYFVMEYVNGGDLMYHIQQV-GKFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  500 (683)
T ss_pred             eeeEEEEecCchhhhHHHHh-cccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeeccccccc
Confidence            99999999999998888543 456777888899999999999999   99999999999999999999999999999742


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      - -....+..++||+.|+|||++...+|+...|.|||||+||||+.|++||+..+++   .+.+.+.+            
T Consensus       501 i-~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~---elF~aI~e------------  564 (683)
T KOG0696|consen  501 I-FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED---ELFQAIME------------  564 (683)
T ss_pred             c-cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHHH------------
Confidence            2 2334566789999999999999999999999999999999999999999865543   23332222            


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRP  614 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP  614 (645)
                      .  .-.++.....+...+....+...|.+|-
T Consensus       565 h--nvsyPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  565 H--NVSYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             c--cCcCcccccHHHHHHHHHHhhcCCcccc
Confidence            1  1123333445556666777888888884

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4.4e-32  Score=274.72  Aligned_cols=266  Identities=26%  Similarity=0.368  Sum_probs=203.9

Q ss_pred             HHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--Ch-----hhHHHHHHHHHHHHhcCCCCccEEEeee
Q 042831          346 ELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SK-----QGIKEYASEVKIISRLRHRNLVQLLGWC  418 (645)
Q Consensus       346 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~-----~~~~~~~~Ei~~l~~l~H~nlv~l~~~~  418 (645)
                      +-....++|-.+++||+|||+.||++.+....+.||||+-..+  -+     ...+...+|..+-..|.||.||++++|+
T Consensus       457 DHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyf  536 (775)
T KOG1151|consen  457 DHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYF  536 (775)
T ss_pred             cCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeee
Confidence            3334455777889999999999999999988999999975322  11     1245677899999999999999999998


Q ss_pred             ee-CCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC---CCCcEEE
Q 042831          419 HE-KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD---SNFNAKI  494 (645)
Q Consensus       419 ~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld---~~~~~kl  494 (645)
                      .- .+.+|-|.|||++.+|+-+|.+ .+.+++...+.|+.||..||.||.+ .+.+|||-||||.||||-   .-|.+||
T Consensus       537 slDtdsFCTVLEYceGNDLDFYLKQ-hklmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKI  614 (775)
T KOG1151|consen  537 SLDTDSFCTVLEYCEGNDLDFYLKQ-HKLMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKI  614 (775)
T ss_pred             eeccccceeeeeecCCCchhHHHHh-hhhhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEe
Confidence            74 5678999999999999988854 4678999999999999999999997 467999999999999994   4578999


Q ss_pred             eeccCcccccccCCc------ceeecccCccccCccccccC----CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchh
Q 042831          495 GDFGLARLVEHAKGS------QTTVLAGTMGYMAPECATTG----KASKESDVYSFGIVALEIACGRKPINPKAPQGQVS  564 (645)
Q Consensus       495 ~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~----~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~  564 (645)
                      +|||++++++.....      .+...+||.+|++||++.-+    +++.|.||||.||++|.++.|+.||......  ..
T Consensus       615 TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ--Qd  692 (775)
T KOG1151|consen  615 TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ--QD  692 (775)
T ss_pred             eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH--HH
Confidence            999999998754432      23457899999999988544    4788999999999999999999999864432  22


Q ss_pred             HHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          565 LLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       565 l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      +++       +..+..+-+-.+..  .+........++++||+..-++|....++..+..
T Consensus       693 ILq-------eNTIlkAtEVqFP~--KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpy  743 (775)
T KOG1151|consen  693 ILQ-------ENTILKATEVQFPP--KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPY  743 (775)
T ss_pred             HHh-------hhchhcceeccCCC--CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCcc
Confidence            222       12222211111100  0112234456789999999999988888776554

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=6.1e-31  Score=287.09  Aligned_cols=264  Identities=26%  Similarity=0.391  Sum_probs=216.7

Q ss_pred             cChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeee
Q 042831          342 FPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHE  420 (645)
Q Consensus       342 ~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~  420 (645)
                      ..++.+...++-|++.+.||.|.+|.||+++...+++.+|+|+....... .++...|.++++.+ .|||++.++|++..
T Consensus         9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k   87 (953)
T KOG0587|consen    9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIK   87 (953)
T ss_pred             cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence            44556666778899999999999999999999999999999988655433 35667889999887 59999999999853


Q ss_pred             -----CCeEEEEEEecCCCChhhhhhh-cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEE
Q 042831          421 -----KKELLLVYEFMPNGSLDSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKI  494 (645)
Q Consensus       421 -----~~~~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl  494 (645)
                           +++++||||||.+||..+++.. .+..+.|+.+..|+..++.||++||.   ..++|||||-.|||++.++.+||
T Consensus        88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKL  164 (953)
T KOG0587|consen   88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKL  164 (953)
T ss_pred             ecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEE
Confidence                 4689999999999999998864 26789999999999999999999998   88999999999999999999999


Q ss_pred             eeccCcccccccCCcceeecccCccccCccccccC-----CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHH
Q 042831          495 GDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG-----KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWV  569 (645)
Q Consensus       495 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~  569 (645)
                      +|||++..++..... .....||+.|||||++.-.     .++.++|+||||++..||.-|.+|+.+..+-      ..+
T Consensus       165 vDFGvSaQldsT~gr-RnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm------raL  237 (953)
T KOG0587|consen  165 VDFGVSAQLDSTVGR-RNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM------RAL  237 (953)
T ss_pred             eeeeeeeeeeccccc-ccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh------hhh
Confidence            999998876654433 3346799999999988532     4678999999999999999999999865542      111


Q ss_pred             HHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          570 WDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       570 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      +      .+...-.|.+..  +....+++.+++..||..|-++||++.++++|..
T Consensus       238 F------~IpRNPPPkLkr--p~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpF  284 (953)
T KOG0587|consen  238 F------LIPRNPPPKLKR--PKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPF  284 (953)
T ss_pred             c------cCCCCCCccccc--hhhHHHHHHHHHHHHHhhccccCcchhhhccCCc
Confidence            1      122222344432  4467788999999999999999999999998864

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=6.2e-31  Score=276.35  Aligned_cols=256  Identities=21%  Similarity=0.361  Sum_probs=204.2

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      .-|..++.||-|+||+|.+++..++...+|+|.+++.   .+.......+|-.||.+...+=||+|+-.|++++.+|+||
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence            4588899999999999999999999999999998765   3455667889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc---
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH---  505 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~---  505 (645)
                      ||++||++-.+|.+ .+.+++...+-.+..+..|+++.|.   .|+|||||||+|||||.+|++||+||||+.-+.-   
T Consensus       709 dYIPGGDmMSLLIr-mgIFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd  784 (1034)
T KOG0608|consen  709 DYIPGGDMMSLLIR-MGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD  784 (1034)
T ss_pred             eccCCccHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeeccccccceeccc
Confidence            99999999998864 3567888888888899999999998   9999999999999999999999999999863310   


Q ss_pred             ------c---CC-----------------------------cceeecccCccccCccccccCCCCcchhHHHHHHHHHHH
Q 042831          506 ------A---KG-----------------------------SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI  547 (645)
Q Consensus       506 ------~---~~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~el  547 (645)
                            +   +.                             .....++||..|+|||++....++..+|.||.||+||||
T Consensus       785 skYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em  864 (1034)
T KOG0608|consen  785 SKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEM  864 (1034)
T ss_pred             cccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHH
Confidence                  0   00                             000125699999999999999999999999999999999


Q ss_pred             HcCCCCCCCCCCCCc-hhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCC---CHHHHHHHh
Q 042831          548 ACGRKPINPKAPQGQ-VSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRP---SIRQVIHVL  623 (645)
Q Consensus       548 ltG~~pf~~~~~~~~-~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---s~~evl~~L  623 (645)
                      +.|+.||-...+.+. ..++.|-          ..++-..++....+....+.   ..|+  ++++|-   -..||..|.
T Consensus       865 ~~g~~pf~~~tp~~tq~kv~nw~----------~~l~~~~~~~ls~e~~~li~---kLc~--sad~RLGkng~d~vKaHp  929 (1034)
T KOG0608|consen  865 LVGQPPFLADTPGETQYKVINWR----------NFLHIPYQGNLSKEALDLIQ---KLCC--SADSRLGKNGADQVKAHP  929 (1034)
T ss_pred             hhCCCCccCCCCCcceeeeeehh----------hccccccccccCHHHHHHHH---HHhc--ChhhhhcccchhhhhcCc
Confidence            999999987776543 3334442          23333345555555444433   3466  444554   456688888


Q ss_pred             ccC
Q 042831          624 NFE  626 (645)
Q Consensus       624 ~~~  626 (645)
                      +|.
T Consensus       930 fFk  932 (1034)
T KOG0608|consen  930 FFK  932 (1034)
T ss_pred             ccc
Confidence            764

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-30  Score=256.42  Aligned_cols=251  Identities=21%  Similarity=0.331  Sum_probs=201.6

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeE
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~  424 (645)
                      ...++|...+.||+|.+.+|.+++++.+.+.+|+|++++.   ..+.+.....|-.+..+. +||.+|-+..+++.+..+
T Consensus       247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrl  326 (593)
T KOG0695|consen  247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRL  326 (593)
T ss_pred             cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceE
Confidence            3446899999999999999999999999999999998764   445566677787777776 699999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++|.||+++|+|--+++ +.+.|+++..+-....|.-||.|||+   +|||.||||..|||+|.+|.+||+|+|+++.- 
T Consensus       327 ffvieyv~ggdlmfhmq-rqrklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~-  401 (593)
T KOG0695|consen  327 FFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG-  401 (593)
T ss_pred             EEEEEEecCcceeeehh-hhhcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcC-
Confidence            99999999999987774 44578888888899999999999999   99999999999999999999999999999853 


Q ss_pred             ccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCC-CCCchhHHHHHHHHhcCCccccccC
Q 042831          505 HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKA-PQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       505 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~-~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      -..+..+..++||+.|+|||++++..|....|.|++||+++||+.||.||+.-. +..+.+.-++.++.+-+..+.  +.
T Consensus       402 l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir--ip  479 (593)
T KOG0695|consen  402 LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR--IP  479 (593)
T ss_pred             CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc--cc
Confidence            234456677899999999999999999999999999999999999999997432 112233344555444332221  11


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRP  614 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP  614 (645)
                      ..+        ..+...+...-|++||.+|-
T Consensus       480 rsl--------svkas~vlkgflnkdp~erl  502 (593)
T KOG0695|consen  480 RSL--------SVKASHVLKGFLNKDPKERL  502 (593)
T ss_pred             cee--------ehhhHHHHHHhhcCCcHHhc
Confidence            111        12334455667789998874

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=5.2e-31  Score=271.33  Aligned_cols=255  Identities=22%  Similarity=0.288  Sum_probs=208.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      .++.....||-||||.|=++..+.....+|+|++++.   ...+.+....|-.+|.+.+.|.||+++--+.+.+..|+.|
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm  499 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM  499 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence            3455577899999999999998866556899988653   4455677889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |-|-+|.|+..|.++ +.++.....-++..+.+|+.|||.   ++||.|||||+|.+||.+|-+||.|||+|+.+..  +
T Consensus       500 EaClGGElWTiLrdR-g~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~--g  573 (732)
T KOG0614|consen  500 EACLGGELWTILRDR-GSFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS--G  573 (732)
T ss_pred             HhhcCchhhhhhhhc-CCcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhcc--C
Confidence            999999999999554 567777788888999999999999   9999999999999999999999999999997754  3


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ..+-.++||+.|.|||++.+...+.++|.||||++++||++|++||...++-..-       .++-+|     +|..   
T Consensus       574 ~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktY-------n~ILkG-----id~i---  638 (732)
T KOG0614|consen  574 RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTY-------NLILKG-----IDKI---  638 (732)
T ss_pred             CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHH-------HHHHhh-----hhhh---
Confidence            4556689999999999999999999999999999999999999999865542111       111111     2211   


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHhccCC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPS-----IRQVIHVLNFEA  627 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~~~  627 (645)
                      +++........++++..+..+|.+|-.     ..++-+|-|++.
T Consensus       639 ~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  639 EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence            122223345566777788899999975     889999999753

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.96  E-value=2.2e-30  Score=239.62  Aligned_cols=207  Identities=29%  Similarity=0.412  Sum_probs=174.4

Q ss_pred             HHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeE
Q 042831          347 LALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       347 l~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~  424 (645)
                      ++...++......||+|++|.|-+-++..+|+..|+|++... +.+..++.++|+.+..+- .+|.+|.++|...++...
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv  120 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV  120 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence            344445555678899999999999999999999999999755 456677888999887765 699999999999999999


Q ss_pred             EEEEEecCCCChhhhhh---hcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          425 LLVYEFMPNGSLDSHLF---KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      ++.||.| ..||+.+..   +.+..+++...-+|+..+.+||.|||+  ...++|||+||+|||++..|++|+||||.+-
T Consensus       121 wIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG  197 (282)
T KOG0984|consen  121 WICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISG  197 (282)
T ss_pred             EEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccce
Confidence            9999999 667876654   467889999999999999999999999  4689999999999999999999999999987


Q ss_pred             cccccCCcceeecccCccccCcccccc----CCCCcchhHHHHHHHHHHHHcCCCCCCCCC
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATT----GKASKESDVYSFGIVALEIACGRKPINPKA  558 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~t~~sDV~SfGvll~elltG~~pf~~~~  558 (645)
                      .+..+-  ..+...|...|||||.+..    ..|+-+|||||||+.+.||++++.||+...
T Consensus       198 ~L~dSi--Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~  256 (282)
T KOG0984|consen  198 YLVDSI--AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG  256 (282)
T ss_pred             eehhhh--HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence            654321  1223467788999998753    368999999999999999999999997543

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.96  E-value=9.7e-31  Score=284.30  Aligned_cols=249  Identities=26%  Similarity=0.373  Sum_probs=191.5

Q ss_pred             CCCCCCccCcCCcEE-EEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEEe
Q 042831          353 DFNDDQKLGQGGFGG-VYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~-Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      -|...+.+|.|..|+ ||+|...  |+.||||++-...   ..-..+|+..|+.- +||||+++++.-.++...||..|.
T Consensus       510 ~~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalEL  584 (903)
T KOG1027|consen  510 FFSPKEILGYGSNGTVVFRGVYE--GREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALEL  584 (903)
T ss_pred             eeccHHHcccCCCCcEEEEEeeC--CceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehH
Confidence            356677899999886 6999986  6899999885332   23456899999887 599999999999999999999999


Q ss_pred             cCCCChhhhhhhcCC---CCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC-----CCcEEEeeccCccc
Q 042831          431 MPNGSLDSHLFKENS---LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-----NFNAKIGDFGLARL  502 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~---~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~-----~~~~kl~DfGla~~  502 (645)
                      | ..+|.+++.....   ...-...+.+..|+++||++||+   .+||||||||.||||+.     ...++|+|||+++.
T Consensus       585 C-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk  660 (903)
T KOG1027|consen  585 C-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK  660 (903)
T ss_pred             h-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence            9 6799999976311   11113446788999999999999   89999999999999975     35799999999998


Q ss_pred             ccccCCc--ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccc
Q 042831          503 VEHAKGS--QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLL  579 (645)
Q Consensus       503 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~  579 (645)
                      +......  ......||.||+|||++.....+.+.||||+||++|.+++ |..||.+....+ .+++.      ++..+.
T Consensus       661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-~NIl~------~~~~L~  733 (903)
T KOG1027|consen  661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-ANILT------GNYTLV  733 (903)
T ss_pred             cCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh-hhhhc------Ccccee
Confidence            7655443  2345789999999999999988999999999999999999 589998544321 11110      011111


Q ss_pred             cccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       580 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                           .+...  .++  ...+|+.+|++++|..||++.+|+.|.-|.
T Consensus       734 -----~L~~~--~d~--eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW  771 (903)
T KOG1027|consen  734 -----HLEPL--PDC--EAKDLISRMLNPDPQLRPSATDVLNHPLFW  771 (903)
T ss_pred             -----eeccC--chH--HHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence                 11111  111  566788999999999999999999998653

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.96  E-value=1.6e-28  Score=239.02  Aligned_cols=212  Identities=33%  Similarity=0.539  Sum_probs=186.4

Q ss_pred             cCcCCcEEEEEEEEcCCCeEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCChhh
Q 042831          360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ-GIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS  438 (645)
Q Consensus       360 LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~  438 (645)
                      ||+|.+|.||++...++++.+++|++...... ..+.+.+|++.+.+++|++++++++++......++++||+++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            68999999999999888899999998765443 45688999999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC-CCcEEEeeccCcccccccCCcceeecccC
Q 042831          439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLARLVEHAKGSQTTVLAGT  517 (645)
Q Consensus       439 ~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~-~~~~kl~DfGla~~~~~~~~~~~~~~~gt  517 (645)
                      ++......+++..+..++.+++++|.+||+   .+++|+||+|.||+++. ++.++|+|||.+........ ......+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~  156 (215)
T cd00180          81 LLKENEGKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVGT  156 (215)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccCC
Confidence            986554578999999999999999999999   89999999999999999 89999999999976543321 12334578


Q ss_pred             ccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHH
Q 042831          518 MGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIE  596 (645)
Q Consensus       518 ~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~  596 (645)
                      ..|++||..... ..+.++|+|++|+++++|                                                .
T Consensus       157 ~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------~  188 (215)
T cd00180         157 PAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------P  188 (215)
T ss_pred             CCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------H
Confidence            889999998887 788999999999999999                                                4


Q ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHh
Q 042831          597 RLMIVGLWCAHPDENLRPSIRQVIHVL  623 (645)
Q Consensus       597 ~l~~l~~~Cl~~dP~~RPs~~evl~~L  623 (645)
                      .+.+++..|++.+|++||+++++++++
T Consensus       189 ~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         189 ELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence            567788999999999999999999764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3.2e-31  Score=254.04  Aligned_cols=262  Identities=25%  Similarity=0.354  Sum_probs=202.5

Q ss_pred             CCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC-----eEEEE
Q 042831          355 NDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK-----ELLLV  427 (645)
Q Consensus       355 ~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~-----~~~lV  427 (645)
                      +..+.||.|+||.||..++..+|+.||+|++..-  +-...+.+.+|+++|+-++|.|++..++..+-..     ++|++
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~  135 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL  135 (449)
T ss_pred             CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence            3467899999999999999999999999988643  3345678899999999999999999988765432     56788


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      .|.| ..+|.+.+.. ...++...++-+..||++||.|||+   .+|.||||||.|.|++.|...||||||+++..+...
T Consensus       136 TELm-QSDLHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~  210 (449)
T KOG0664|consen  136 TELM-QSDLHKIIVS-PQALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD  210 (449)
T ss_pred             HHHH-Hhhhhheecc-CCCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEecccccccccchhh
Confidence            8888 5567666643 3467778888899999999999999   999999999999999999999999999999877666


Q ss_pred             CcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc-----------C
Q 042831          508 GSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG-----------N  575 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~-----------~  575 (645)
                      ....+..+-|..|.|||++.+. .|+.+.||||.||++.||+..|..|+...+-++..++   .++.+           +
T Consensus       211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lI---tdLLGTPs~EaMr~ACE  287 (449)
T KOG0664|consen  211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMI---IDLLGTPSQEAMKYACE  287 (449)
T ss_pred             hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHH---HHHhCCCcHHHHHHHhh
Confidence            6666666778899999999875 4899999999999999999999999877665544333   22222           2


Q ss_pred             CccccccC-----ccc---cC--CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          576 GKLLEAVD-----PRL---CR--DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       576 ~~l~~~~d-----~~l---~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      |....++.     |.+   ..  ..+..+ .+.+.+.+.+++.||++|.+..+.+.++..
T Consensus       288 GAk~H~LR~~~k~Ps~~vLYtlsS~~~~~-heav~~~~~~l~~d~dkris~~~A~~~~~~  346 (449)
T KOG0664|consen  288 GAKNHVLRAGLRAPDTQRLYKIASPDDKN-HEAVDLLQKLLHFDPDKRISVEEALQHRYL  346 (449)
T ss_pred             hhHHHhhccCCCCCCccceeeecCCcccc-hHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence            22211111     111   11  111112 223345567889999999999999999864

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=6.4e-28  Score=248.25  Aligned_cols=268  Identities=23%  Similarity=0.320  Sum_probs=196.6

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-----C---CCccEEEeeeee--
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-----H---RNLVQLLGWCHE--  420 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----H---~nlv~l~~~~~~--  420 (645)
                      ..+|...++||.|-|++||++.+..+.+.||+|+++.. ....+..+.||++|++++     |   ..||+|+++|..  
T Consensus        77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG  155 (590)
T KOG1290|consen   77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG  155 (590)
T ss_pred             CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence            36888999999999999999999999999999998643 334456778999999984     2   479999999975  


Q ss_pred             --CCeEEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC--------
Q 042831          421 --KKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN--------  489 (645)
Q Consensus       421 --~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~--------  489 (645)
                        +.+.|||+|++ |.+|..++... -+-++...+++|++||+.||.|||.+  .+|||.||||+|||+..+        
T Consensus       156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl~~~e~~~~~~~  232 (590)
T KOG1290|consen  156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLLCSTEIDPAKDA  232 (590)
T ss_pred             CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeeeeccccchhhhh
Confidence              45899999999 66777777653 46799999999999999999999996  579999999999999421        


Q ss_pred             ---C-----------c----------------------------------------------------------------
Q 042831          490 ---F-----------N----------------------------------------------------------------  491 (645)
Q Consensus       490 ---~-----------~----------------------------------------------------------------  491 (645)
                         +           .                                                                
T Consensus       233 ~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~  312 (590)
T KOG1290|consen  233 REAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGN  312 (590)
T ss_pred             hhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCcc
Confidence               0           0                                                                


Q ss_pred             --------------------------------------------------------------------------------
Q 042831          492 --------------------------------------------------------------------------------  491 (645)
Q Consensus       492 --------------------------------------------------------------------------------  491 (645)
                                                                                                      
T Consensus       313 ~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~  392 (590)
T KOG1290|consen  313 ESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIR  392 (590)
T ss_pred             ccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCcccee
Confidence                                                                                            


Q ss_pred             EEEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc---hhHHHH
Q 042831          492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ---VSLLQW  568 (645)
Q Consensus       492 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~---~~l~~~  568 (645)
                      +||+|||.|+...+    +.+.-..|..|+|||++.+..|++.+||||++|+++||+||...|++....+-   .+=+..
T Consensus       393 vKIaDlGNACW~~k----hFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~  468 (590)
T KOG1290|consen  393 VKIADLGNACWVHK----HFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIAL  468 (590)
T ss_pred             EEEeeccchhhhhh----hhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHH
Confidence            00001110000000    00001246789999999999999999999999999999999999986553321   111111


Q ss_pred             HHHH--------h-----------cCCccccccC--c-----cc--cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Q 042831          569 VWDL--------Y-----------GNGKLLEAVD--P-----RL--CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI  620 (645)
Q Consensus       569 ~~~~--------~-----------~~~~l~~~~d--~-----~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  620 (645)
                      +.++        .           +.|.+..+-.  +     -|  .=+++.+++.++..++.-+|+.+|++|||+.+.+
T Consensus       469 i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl  548 (590)
T KOG1290|consen  469 IMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCL  548 (590)
T ss_pred             HHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHh
Confidence            1111        1           1233322211  0     00  1146778899999999999999999999999999


Q ss_pred             HHhccC
Q 042831          621 HVLNFE  626 (645)
Q Consensus       621 ~~L~~~  626 (645)
                      +|.|-.
T Consensus       549 ~hPwLn  554 (590)
T KOG1290|consen  549 KHPWLN  554 (590)
T ss_pred             cCcccc
Confidence            999965

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.95  E-value=1.6e-27  Score=235.85  Aligned_cols=200  Identities=31%  Similarity=0.493  Sum_probs=175.3

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecC
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ-GIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP  432 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~  432 (645)
                      |...+.||+|++|.||++...++++.+++|.+...... ..+.+.+|++.+.+++|+|++++++++......++++||++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            45678899999999999999988899999999766544 67889999999999999999999999999999999999999


Q ss_pred             CCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCccee
Q 042831          433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT  512 (645)
Q Consensus       433 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~  512 (645)
                      +++|.+++......+++..+..++.+++.+|.|||+   .+++|+||+|+||+++.++.++|+|||.+............
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~  157 (225)
T smart00221       81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK  157 (225)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence            999999986544338999999999999999999998   79999999999999999999999999999876543211223


Q ss_pred             ecccCccccCcccc-ccCCCCcchhHHHHHHHHHHHHcCCCCCCC
Q 042831          513 VLAGTMGYMAPECA-TTGKASKESDVYSFGIVALEIACGRKPINP  556 (645)
Q Consensus       513 ~~~gt~~y~aPE~~-~~~~~t~~sDV~SfGvll~elltG~~pf~~  556 (645)
                      ...++..|++||.+ ....++.++|+|+||++++||++|+.||..
T Consensus       158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            35677889999998 666788899999999999999999999964

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.95  E-value=4e-28  Score=227.74  Aligned_cols=261  Identities=20%  Similarity=0.276  Sum_probs=199.0

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeC--CeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEK--KELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~--~~~~lV  427 (645)
                      .++|++.+++|+|.++.||.|....+++.++||.++.-.   .+.+.+|+.+|..|+ ||||+++++...+.  ....||
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi  113 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI  113 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence            467888999999999999999998889999999986543   357789999999998 99999999998765  467899


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC-CCcEEEeeccCccccccc
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~-~~~~kl~DfGla~~~~~~  506 (645)
                      +||+.+.+.....    ..++...+...+.+++.||.|+|+   .||.|||+||.|+++|. +-..+|+|+|+|..+..+
T Consensus       114 FE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~  186 (338)
T KOG0668|consen  114 FEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG  186 (338)
T ss_pred             hhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchHhhcCCC
Confidence            9999988776554    357777888899999999999999   99999999999999995 456999999999987654


Q ss_pred             CCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHH--H------HHHhcCCc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQW--V------WDLYGNGK  577 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~--~------~~~~~~~~  577 (645)
                      ..  ....+.+..|--||.+..- .++-.-|+|||||+|.+|+..+.||-......+ .++..  +      ..+..+-.
T Consensus       187 ~e--YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~D-QLVkIakVLGt~el~~Yl~KY~  263 (338)
T KOG0668|consen  187 KE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD-QLVKIAKVLGTDELYAYLNKYQ  263 (338)
T ss_pred             ce--eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHH-HHHHHHHHhChHHHHHHHHHHc
Confidence            43  3334567788999988664 478899999999999999999999875543221 12211  1      11111111


Q ss_pred             cccccCccccC---------------CCCHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          578 LLEAVDPRLCR---------------DFDGQ-QIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       578 l~~~~d~~l~~---------------~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      +  .+||.+..               .-... ...+.++++-..|..|-++|||++|++.|..|.
T Consensus       264 i--~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~  326 (338)
T KOG0668|consen  264 I--DLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFA  326 (338)
T ss_pred             c--CCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHH
Confidence            1  12222211               00001 114566777788899999999999999999875

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.95  E-value=1.6e-27  Score=234.26  Aligned_cols=267  Identities=23%  Similarity=0.240  Sum_probs=200.7

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC------
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK------  421 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~------  421 (645)
                      ...+|...+.+|.|.- .|-.+.+.-.++.||+|++...  .....+...+|..++..++|+|+++++.++.-.      
T Consensus        15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~   93 (369)
T KOG0665|consen   15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF   93 (369)
T ss_pred             eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence            3456777889999998 7777887777899999987543  344567778999999999999999999988533      


Q ss_pred             CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          422 KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      .+.++||||| ..+|...++   ..++-+....|..|++.|+.|||+   .+|+||||||+||++..++.+||.|||+++
T Consensus        94 ~e~y~v~e~m-~~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~ar  166 (369)
T KOG0665|consen   94 QEVYLVMELM-DANLCQVIL---MELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLAR  166 (369)
T ss_pred             HhHHHHHHhh-hhHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchhhc
Confidence            3679999999 667877765   345667888999999999999999   999999999999999999999999999998


Q ss_pred             cccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHH---------------
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL---------------  566 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~---------------  566 (645)
                      ..+..  -..+..+.|..|.|||++.+..+.+.+||||.||++.||++|+.-|.+...-++-..+               
T Consensus       167 ~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL  244 (369)
T KOG0665|consen  167 TEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL  244 (369)
T ss_pred             ccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence            64432  2445567888999999999888999999999999999999999999755432221111               


Q ss_pred             -HHHHHHhcC------Ccccccc-CccccC--CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          567 -QWVWDLYGN------GKLLEAV-DPRLCR--DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       567 -~~~~~~~~~------~~l~~~~-d~~l~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                       .-+..+.+.      -...+.+ |..+..  +.+.-.......++.++|-.+|++|.+.+++|+|....
T Consensus       245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence             001111110      0001111 110100  11112234556778999999999999999999999764

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.94  E-value=8.4e-28  Score=251.31  Aligned_cols=197  Identities=27%  Similarity=0.414  Sum_probs=170.1

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--------hhhHHHHHHHHHHHHhcC---CCCccEEEeeeee
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--------KQGIKEYASEVKIISRLR---HRNLVQLLGWCHE  420 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--------~~~~~~~~~Ei~~l~~l~---H~nlv~l~~~~~~  420 (645)
                      .+|...+.+|+|+||.|+++.++.....|+||.+.+..        ....-..-.|+.+|..++   |+||++++++|++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            46889999999999999999999989999999886531        111123457999999997   9999999999999


Q ss_pred             CCeEEEEEEecC-CCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccC
Q 042831          421 KKELLLVYEFMP-NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL  499 (645)
Q Consensus       421 ~~~~~lV~Ey~~-~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGl  499 (645)
                      ++.++|++|-.. +-+|.+++. .+..+++.....|++|++.|+.+||.   ++|||||||-+||.+|.+|-+||+|||.
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE-~kp~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klidfgs  716 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIE-FKPRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLIDFGS  716 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhh-ccCccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEeeccc
Confidence            999999999764 446777773 45678999999999999999999999   9999999999999999999999999999


Q ss_pred             cccccccCCcceeecccCccccCccccccCCC-CcchhHHHHHHHHHHHHcCCCCCC
Q 042831          500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRKPIN  555 (645)
Q Consensus       500 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~~sDV~SfGvll~elltG~~pf~  555 (645)
                      +.+...+   ....+.||.+|.|||++.+.+| ...-|||++|++||-++....||.
T Consensus       717 aa~~ksg---pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  717 AAYTKSG---PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             hhhhcCC---CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            9766543   3455789999999999998875 677899999999999999998885

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.94  E-value=7.1e-27  Score=224.46  Aligned_cols=257  Identities=23%  Similarity=0.369  Sum_probs=192.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCCccEEEee-eeeCCeEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLGW-CHEKKELLLVY  428 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~-~~~~~~~~lV~  428 (645)
                      .+.|.+.+.||+|.||.+-++.++++++.+++|-+... ....++|.+|...--.|. |.||+.-++. |+..+.+++++
T Consensus        23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q  101 (378)
T KOG1345|consen   23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ  101 (378)
T ss_pred             hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence            35788899999999999999999999999999988543 334678999987766664 8999987764 66778889999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE-C-CCCcEEEeeccCccccccc
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-D-SNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl-d-~~~~~kl~DfGla~~~~~~  506 (645)
                      ||+|.|+|.+-+..  ..+-+..-.+++.|+++|+.|||+   +++||||||.+|||+ + +...+||||||+.+..+. 
T Consensus       102 E~aP~gdL~snv~~--~GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~-  175 (378)
T KOG1345|consen  102 EFAPRGDLRSNVEA--AGIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT-  175 (378)
T ss_pred             ccCccchhhhhcCc--ccccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecccccccCc-
Confidence            99999999988744  346778888999999999999999   999999999999999 3 344799999999875432 


Q ss_pred             CCcceeecccCccccCccccccC-----CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTG-----KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA  581 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~-----~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~  581 (645)
                         .......+..|.+||.....     +..+.+|+|.||++++.+++|+.||+.....++   .-|-|..|.+++....
T Consensus       176 ---tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~---~Y~~~~~w~~rk~~~~  249 (378)
T KOG1345|consen  176 ---TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDK---PYWEWEQWLKRKNPAL  249 (378)
T ss_pred             ---eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCc---hHHHHHHHhcccCccC
Confidence               22223445678999976432     357789999999999999999999984333222   2344555555444321


Q ss_pred             cCccccCCCCHHHHHHHHHHHHHcCCCCCCCC---CCHHHHHHHhccC
Q 042831          582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLR---PSIRQVIHVLNFE  626 (645)
Q Consensus       582 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~evl~~L~~~  626 (645)
                        |+.-..+.    ++++.+-.+-+.+++++|   -+.+.....+|.+
T Consensus       250 --P~~F~~fs----~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E  291 (378)
T KOG1345|consen  250 --PKKFNPFS----EKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE  291 (378)
T ss_pred             --chhhcccC----HHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence              22222333    355566677889999999   4445555555543

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.94  E-value=1.2e-27  Score=254.09  Aligned_cols=256  Identities=24%  Similarity=0.358  Sum_probs=206.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|...+.+|+|.+|.|||++++.+++..|+|.++.......+-..+|+-+++..+|+||+.++|-+.....+++.||||
T Consensus        15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc   94 (829)
T KOG0576|consen   15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC   94 (829)
T ss_pred             cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence            57788899999999999999999999999999998877777777788999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      .+|+|.+..+- ...+++.++..+++...+||.|||+   ++=+|||||-.|||+++.+.+|++|||.+-.+.. .-...
T Consensus        95 gggslQdiy~~-TgplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqita-ti~Kr  169 (829)
T KOG0576|consen   95 GGGSLQDIYHV-TGPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITA-TIAKR  169 (829)
T ss_pred             CCCcccceeee-cccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhh-hhhhh
Confidence            99999987643 4578999999999999999999998   8889999999999999999999999999764432 22344


Q ss_pred             eecccCccccCcccc---ccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          512 TVLAGTMGYMAPECA---TTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~---~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ..+.||+.|||||+.   +.+.|..++|||+.|+...|+.--+.|..+..+.      +..+-+-..+    .-.|.+..
T Consensus       170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm------r~l~LmTkS~----~qpp~lkD  239 (829)
T KOG0576|consen  170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM------RALFLMTKSG----FQPPTLKD  239 (829)
T ss_pred             hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH------HHHHHhhccC----CCCCcccC
Confidence            567899999999975   4567999999999999999998777765433221      1111110111    01122221


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        .....+.+.+++..|+..+|++||+++.+++|.-
T Consensus       240 --k~kws~~fh~fvK~altknpKkRptaeklL~h~f  273 (829)
T KOG0576|consen  240 --KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPF  273 (829)
T ss_pred             --CccchHHHHHHHHHHhcCCCccCCChhhheecee
Confidence              1234567888999999999999999998887543

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.94  E-value=2.5e-27  Score=278.16  Aligned_cols=201  Identities=18%  Similarity=0.272  Sum_probs=145.8

Q ss_pred             hcCC-CCccEEEeee-------eeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeee
Q 042831          405 RLRH-RNLVQLLGWC-------HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH  476 (645)
Q Consensus       405 ~l~H-~nlv~l~~~~-------~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH  476 (645)
                      .++| +||++++++|       .+...+++++||+ +++|.+++......+++..++.++.||++||.|||+   ++|+|
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~gIvH  103 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHS---QGIVV  103 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHh---CCeee
Confidence            3456 6888888887       2234678888987 669999997666779999999999999999999998   99999


Q ss_pred             ccCCCCCeEECC-------------------CCcEEEeeccCcccccccCC---------------cceeecccCccccC
Q 042831          477 RDIKSSNIMLDS-------------------NFNAKIGDFGLARLVEHAKG---------------SQTTVLAGTMGYMA  522 (645)
Q Consensus       477 ~Dlkp~NILld~-------------------~~~~kl~DfGla~~~~~~~~---------------~~~~~~~gt~~y~a  522 (645)
                      |||||+||||+.                   ++.+|++|||+++.......               .......||+.|||
T Consensus       104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A  183 (793)
T PLN00181        104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS  183 (793)
T ss_pred             ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence            999999999954                   44566666666653211000               00112357889999


Q ss_pred             ccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHH
Q 042831          523 PECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVG  602 (645)
Q Consensus       523 PE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~  602 (645)
                      ||++.+..++.++|||||||+||||++|..|+....     ...   .... ..    .+++...     ........++
T Consensus       184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~-----~~~---~~~~-~~----~~~~~~~-----~~~~~~~~~~  245 (793)
T PLN00181        184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS-----RTM---SSLR-HR----VLPPQIL-----LNWPKEASFC  245 (793)
T ss_pred             hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH-----HHH---HHHH-Hh----hcChhhh-----hcCHHHHHHH
Confidence            999999999999999999999999999988865211     011   1110 00    1111111     1123345677


Q ss_pred             HHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          603 LWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       603 ~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      .+||+++|.+||+|+|++++.+...
T Consensus       246 ~~~L~~~P~~Rps~~eil~h~~~~~  270 (793)
T PLN00181        246 LWLLHPEPSCRPSMSELLQSEFINE  270 (793)
T ss_pred             HHhCCCChhhCcChHHHhhchhhhh
Confidence            8999999999999999999998753

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.94  E-value=3.5e-27  Score=243.77  Aligned_cols=287  Identities=21%  Similarity=0.226  Sum_probs=212.4

Q ss_pred             hhhhhcCCCCCccChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC--
Q 042831          330 DDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR--  407 (645)
Q Consensus       330 ~~~~~~~~~~~~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~--  407 (645)
                      .+.|....+-  |.+.-.+....+|......|+|-|++|.+|.+..-|..||||++..+.. -.+.=+.|+++|.+|+  
T Consensus       412 ~DNWdDaEGY--Yrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~A  488 (752)
T KOG0670|consen  412 QDNWDDAEGY--YRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDA  488 (752)
T ss_pred             ccCcccccce--EEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhcc
Confidence            3444444433  3333344456789999999999999999999988888999999976532 2344568999999996  


Q ss_pred             ----CCCccEEEeeeeeCCeEEEEEEecCCCChhhhhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCC
Q 042831          408 ----HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKE--NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKS  481 (645)
Q Consensus       408 ----H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp  481 (645)
                          .-|.++|+-.|...+++|||+|-+ ..+|.+.|.+-  +--|....+..+++|+.-||..|..   .+|+|.||||
T Consensus       489 D~Edk~Hclrl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKP  564 (752)
T KOG0670|consen  489 DPEDKFHCLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKP  564 (752)
T ss_pred             CchhhhHHHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh---cCeeecccCc
Confidence                247889999999999999999987 67899999764  3457788899999999999999998   8999999999


Q ss_pred             CCeEECCCC-cEEEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCC
Q 042831          482 SNIMLDSNF-NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQ  560 (645)
Q Consensus       482 ~NILld~~~-~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~  560 (645)
                      .|||+++.- .+||||||.|.......   .+...-...|.|||++.+.+|+...|+||.||+||||.||+..|.+....
T Consensus       565 DNiLVNE~k~iLKLCDfGSA~~~~ene---itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN  641 (752)
T KOG0670|consen  565 DNILVNESKNILKLCDFGSASFASENE---ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN  641 (752)
T ss_pred             cceEeccCcceeeeccCcccccccccc---ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcH
Confidence            999998754 58999999997654322   12222345699999999999999999999999999999999999876543


Q ss_pred             CchhHHHHH-----HHHhcCCcc---------------------------ccccCc------ccc--CCCC---HHHHHH
Q 042831          561 GQVSLLQWV-----WDLYGNGKL---------------------------LEAVDP------RLC--RDFD---GQQIER  597 (645)
Q Consensus       561 ~~~~l~~~~-----~~~~~~~~l---------------------------~~~~d~------~l~--~~~~---~~~~~~  597 (645)
                      ....+.--+     ..+++.|..                           ...+.|      .+.  ..++   ...+..
T Consensus       642 ~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~  721 (752)
T KOG0670|consen  642 QMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQ  721 (752)
T ss_pred             HHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHH
Confidence            322111100     011111111                           111112      110  1122   234577


Q ss_pred             HHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          598 LMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       598 l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      +..|.-.|+..||++|.|..|+|+|..+.
T Consensus       722 ~rdLLdkml~LdP~KRit~nqAL~HpFi~  750 (752)
T KOG0670|consen  722 LRDLLDKMLILDPEKRITVNQALKHPFIT  750 (752)
T ss_pred             HHHHHHHHhccChhhcCCHHHHhcCCccc
Confidence            88899999999999999999999987643

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.93  E-value=5.2e-26  Score=231.68  Aligned_cols=270  Identities=21%  Similarity=0.307  Sum_probs=202.1

Q ss_pred             HHHhhcCCCCCCccCcCCcEEEEEEEEcC---CCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCC
Q 042831          347 LALATNDFNDDQKLGQGGFGGVYKGFFRE---TNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKK  422 (645)
Q Consensus       347 l~~~~~~f~~~~~LG~G~fG~Vy~g~~~~---~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~  422 (645)
                      +....+.|...++||+|.|++||++.+..   .++.||+|.+...+..  ....+|+++|.++. +.||+++.+++..++
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~rnnd  108 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFRNND  108 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence            33445678889999999999999999877   6789999998665433  45789999999996 899999999999999


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC-CCcEEEeeccCcc
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLAR  501 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~-~~~~kl~DfGla~  501 (645)
                      +.++|+||++.....+++.    .++...+...+..+..||.++|.   .|||||||||+|+|.+. .+.-.|.|||+|.
T Consensus       109 ~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  109 QVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             eeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhHH
Confidence            9999999999998888874    46788899999999999999999   99999999999999974 5678999999997


Q ss_pred             cccccC------C-------------------------------------cceeecccCccccCcccccc-CCCCcchhH
Q 042831          502 LVEHAK------G-------------------------------------SQTTVLAGTMGYMAPECATT-GKASKESDV  537 (645)
Q Consensus       502 ~~~~~~------~-------------------------------------~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV  537 (645)
                      ..+...      .                                     ......+||+||.|||++.. ...++++||
T Consensus       182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi  261 (418)
T KOG1167|consen  182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI  261 (418)
T ss_pred             HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence            221000      0                                     00012469999999998866 457999999


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHH----H-----hcCCc--ccc---------------ccC-ccccC--
Q 042831          538 YSFGIVALEIACGRKPINPKAPQGQVSLLQWVWD----L-----YGNGK--LLE---------------AVD-PRLCR--  588 (645)
Q Consensus       538 ~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~----~-----~~~~~--l~~---------------~~d-~~l~~--  588 (645)
                      ||.||+++.+++++.||-....+. ..+.+.+.-    .     ...|.  +.+               -++ ..+.+  
T Consensus       262 ws~GVI~Lslls~~~PFf~a~dd~-~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~  340 (418)
T KOG1167|consen  262 WSAGVILLSLLSRRYPFFKAKDDA-DALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSR  340 (418)
T ss_pred             eeccceeehhhccccccccCcccc-chHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccc
Confidence            999999999999999986544322 112211100    0     00122  111               000 00000  


Q ss_pred             -----CCC--HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          589 -----DFD--GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       589 -----~~~--~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                           ..+  +.....++.+..+|+..||.+|.|++++|+|.-+.
T Consensus       341 q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~  385 (418)
T KOG1167|consen  341 QPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFD  385 (418)
T ss_pred             ccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCc
Confidence                 000  01123677888999999999999999999999875

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.92  E-value=7.3e-25  Score=209.48  Aligned_cols=166  Identities=21%  Similarity=0.145  Sum_probs=126.8

Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceee
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |+|.+++...+..+++.+++.|+.|+++||.|||+   ++      ||+|||++.++.+|+  ||+++......      
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------   63 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPEQ------   63 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeecccc------
Confidence            78999997767789999999999999999999998   44      999999999999999  99987654322      


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..|++.|+|||++.+..++.++|||||||++|||++|+.||.......  .....+......      .++.. ......
T Consensus        64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~------~~~~~-~~~~~~  134 (176)
T smart00750       64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS--AILEILLNGMPA------DDPRD-RSNLES  134 (176)
T ss_pred             CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc--HHHHHHHHHhcc------CCccc-cccHHH
Confidence            258899999999999999999999999999999999999996433211  111111111100      01110 001111


Q ss_pred             HH--HHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          594 QI--ERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       594 ~~--~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..  ..+.+++.+||+.+|++||++.|++++++.
T Consensus       135 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      135 VSAARSFADFMRVCASRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             HHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence            22  258899999999999999999999999875

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.90  E-value=2.9e-23  Score=218.40  Aligned_cols=168  Identities=20%  Similarity=0.222  Sum_probs=131.9

Q ss_pred             HHHhhcCCCCCCccCcCCcEEEEEEEEcC-CCeEEEEEEeccC-----ChhhHHHHHHHHHHHHhcCCCCccE-EEeeee
Q 042831          347 LALATNDFNDDQKLGQGGFGGVYKGFFRE-TNSYIAVKRVSQG-----SKQGIKEYASEVKIISRLRHRNLVQ-LLGWCH  419 (645)
Q Consensus       347 l~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~H~nlv~-l~~~~~  419 (645)
                      .....++|...+.||+|+||+||+|++.. +++.||||+....     .....+.+.+|+++|.+++|+|+++ ++++  
T Consensus        13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--   90 (365)
T PRK09188         13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--   90 (365)
T ss_pred             cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence            34456789999999999999999998875 6788899986533     1223567899999999999999985 4432  


Q ss_pred             eCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccC-CCCCeEECCCCcEEEeecc
Q 042831          420 EKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDI-KSSNIMLDSNFNAKIGDFG  498 (645)
Q Consensus       420 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dl-kp~NILld~~~~~kl~DfG  498 (645)
                        +..++||||+++++|.. + ....      ...++.|++++|.|||+   ++|+|||| ||+|||++.++++||+|||
T Consensus        91 --~~~~LVmE~~~G~~L~~-~-~~~~------~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiDFG  157 (365)
T PRK09188         91 --GKDGLVRGWTEGVPLHL-A-RPHG------DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVIDFQ  157 (365)
T ss_pred             --CCcEEEEEccCCCCHHH-h-Cccc------hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEECc
Confidence              45799999999999963 2 1111      14678899999999999   99999999 9999999999999999999


Q ss_pred             CcccccccCC-------cceeecccCccccCccccccC
Q 042831          499 LARLVEHAKG-------SQTTVLAGTMGYMAPECATTG  529 (645)
Q Consensus       499 la~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~  529 (645)
                      +++.+.....       ...+...++..|+|||.+...
T Consensus       158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             cceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence            9987643221       111345678889999988654

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.88  E-value=1e-23  Score=202.59  Aligned_cols=247  Identities=21%  Similarity=0.331  Sum_probs=187.2

Q ss_pred             CCCCccCcCCcEEEEEEEEcCCCeEEEEEEecc--CChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecC
Q 042831          355 NDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP  432 (645)
Q Consensus       355 ~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~--~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~  432 (645)
                      ....+|.+...|..|+|++.+  ..++.|++.-  ......++|..|.-.|+-+.||||++++|.|.....+.++..||+
T Consensus       193 nl~tkl~e~hsgelwrgrwqg--ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp  270 (448)
T KOG0195|consen  193 NLITKLAESHSGELWRGRWQG--NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP  270 (448)
T ss_pred             hhhhhhccCCCcccccccccC--cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence            345678899999999999974  3466676643  234455789999999999999999999999999999999999999


Q ss_pred             CCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          433 NGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       433 ~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      .|+|+..|++.. -..+..+..+++.++|+|++|||+. ++-|..--|.+..|++|++..++|.- +-++     ...+.
T Consensus       271 ~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarism-ad~k-----fsfqe  343 (448)
T KOG0195|consen  271 FGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISM-ADTK-----FSFQE  343 (448)
T ss_pred             chHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheec-ccce-----eeeec
Confidence            999999998754 4577889999999999999999983 44455567899999999999988851 1111     11112


Q ss_pred             eecccCccccCccccccCCC---CcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          512 TVLAGTMGYMAPECATTGKA---SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~---t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ....-.+.||+||.++..+.   -.++|+|||.++||||.|...||.+..+-+...-+           ..+.    ++.
T Consensus       344 ~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki-----------aleg----lrv  408 (448)
T KOG0195|consen  344 VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI-----------ALEG----LRV  408 (448)
T ss_pred             cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh-----------hhcc----ccc
Confidence            22345678999999987653   35799999999999999999999865543221111           0111    222


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .+++.....+.+|+.-|++.||.+||.+..++-.|+.
T Consensus       409 ~ippgis~hm~klm~icmnedpgkrpkfdmivpilek  445 (448)
T KOG0195|consen  409 HIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEK  445 (448)
T ss_pred             cCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHH
Confidence            2333334566777788999999999999999988864

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.88  E-value=2.2e-21  Score=204.04  Aligned_cols=257  Identities=19%  Similarity=0.257  Sum_probs=192.2

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCC-eEEEEEEeccCChhhHHHHHHHHHHHHhcCC----CCccEEEeee-eeCCeEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETN-SYIAVKRVSQGSKQGIKEYASEVKIISRLRH----RNLVQLLGWC-HEKKELLL  426 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~-~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H----~nlv~l~~~~-~~~~~~~l  426 (645)
                      +|...++||+|+||.||++....++ ..+|+|............+..|..++..+..    +++..+++.. ..+...++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            7889999999999999999987764 6789998765533333367789999988873    6889999888 47778899


Q ss_pred             EEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC-----CcEEEeeccCc
Q 042831          427 VYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN-----FNAKIGDFGLA  500 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~-----~~~kl~DfGla  500 (645)
                      ||+.+ +.+|.++.... .+.++......|+.|++.+|.+||+   .|++||||||.|+++...     ..+.|.|||++
T Consensus        99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla  174 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA  174 (322)
T ss_pred             EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence            99988 88999877544 3789999999999999999999998   999999999999999754     46999999999


Q ss_pred             cccc--ccCC------cc-eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHH
Q 042831          501 RLVE--HAKG------SQ-TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWD  571 (645)
Q Consensus       501 ~~~~--~~~~------~~-~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~  571 (645)
                      +...  ....      .. .....||..|.++++..+...+.+.|+||++.++.|+..|..||.............   .
T Consensus       175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~---~  251 (322)
T KOG1164|consen  175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFE---K  251 (322)
T ss_pred             ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHH---H
Confidence            8322  1111      11 223569999999999999999999999999999999999999997554332211111   1


Q ss_pred             HhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          572 LYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       572 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ...+.    .... + ......+...+.   ..+-..+..++|....+...+..
T Consensus       252 ~~~~~----~~~~-~-~~~~~~~~~~~~---~~~~~~~~~~~Pdy~~~~~~l~~  296 (322)
T KOG1164|consen  252 DPRKL----LTDR-F-GDLKPEEFAKIL---EYIDSLDYEDKPDYEKLAELLKD  296 (322)
T ss_pred             Hhhhh----cccc-c-cCCChHHHHHHH---HHhhccCCcCCCCHHHHHHHHHH
Confidence            10000    0010 1 122223333333   33445799999999999888753

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.87  E-value=1e-20  Score=195.98  Aligned_cols=259  Identities=28%  Similarity=0.368  Sum_probs=197.6

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChh---hHHHHHHHHHHHHhcCCC-CccEEEeeeeeCCeEEEEEE
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ---GIKEYASEVKIISRLRHR-NLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~---~~~~~~~Ei~~l~~l~H~-nlv~l~~~~~~~~~~~lV~E  429 (645)
                      |...+.||.|+||.||++.+.   ..+++|.+......   ....+.+|+.++..+.|+ +++++.+.+......+++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   78 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME   78 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence            566788999999999999987   67899988755322   477899999999999988 79999999977777899999


Q ss_pred             ecCCCChhhhhhhcC--CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC-cEEEeeccCccccccc
Q 042831          430 FMPNGSLDSHLFKEN--SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF-NAKIGDFGLARLVEHA  506 (645)
Q Consensus       430 y~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~-~~kl~DfGla~~~~~~  506 (645)
                      |+.++++.+++....  ..++......+..|++.++.|+|.   .+++|||+||+||+++..+ .++++|||.++.....
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~  155 (384)
T COG0515          79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP  155 (384)
T ss_pred             cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence            999999996664433  278999999999999999999999   8899999999999999988 7999999999855433


Q ss_pred             CCc-----ceeecccCccccCcccccc---CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcc
Q 042831          507 KGS-----QTTVLAGTMGYMAPECATT---GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL  578 (645)
Q Consensus       507 ~~~-----~~~~~~gt~~y~aPE~~~~---~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l  578 (645)
                      ...     ......|+..|++||.+..   .......|+|++|++++++++|+.||......   .......+.......
T Consensus       156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~  232 (384)
T COG0515         156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPT  232 (384)
T ss_pred             CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCC
Confidence            322     2356789999999999987   57899999999999999999999997654321   001111111111110


Q ss_pred             ccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 042831          579 LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHV  622 (645)
Q Consensus       579 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  622 (645)
                      . .................+..++..|+..+|..|.++.+....
T Consensus       233 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         233 P-SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             c-ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            0 000111111002223466777888999999999999988775

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.86  E-value=4.1e-21  Score=189.82  Aligned_cols=205  Identities=21%  Similarity=0.284  Sum_probs=177.5

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeEEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ..-.|...++||+|.||.++.|+..-+++.||||.-...+  ...++..|....+.|. .++|...+-+-.++.+-.||+
T Consensus        26 VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi  103 (449)
T KOG1165|consen   26 VGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI  103 (449)
T ss_pred             ecccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence            4557899999999999999999998889999999754433  3356778888888885 689999988888888999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC-----CCcEEEeeccCcccc
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-----NFNAKIGDFGLARLV  503 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~-----~~~~kl~DfGla~~~  503 (645)
                      |.+ +.||++++.-.++.++...+..|+.|++.-++|+|+   +.+|.|||||+|.||..     ...+.|.|||+|+.+
T Consensus       104 dLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y  179 (449)
T KOG1165|consen  104 DLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY  179 (449)
T ss_pred             hhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence            998 889999887778899999999999999999999999   99999999999999964     335899999999976


Q ss_pred             ccc------CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCC
Q 042831          504 EHA------KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQ  560 (645)
Q Consensus       504 ~~~------~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~  560 (645)
                      ...      .......+.||.+||+-....+.+.+.+.|+-|+|.+++..+-|..||+....+
T Consensus       180 rDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~  242 (449)
T KOG1165|consen  180 RDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD  242 (449)
T ss_pred             cCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc
Confidence            432      334456678999999999999999999999999999999999999999876543

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.86  E-value=3.7e-21  Score=182.39  Aligned_cols=252  Identities=21%  Similarity=0.272  Sum_probs=193.1

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCC-CCccEEEeeeeeCCeEEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH-RNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H-~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ..+.|...++||+|+||.+|.|....+|+.||||.-+...+  ..++.-|..+...|++ ..|..+..+..++..-.+||
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM   90 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM   90 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence            34678899999999999999999999999999998654433  3567789999999985 67777888888888999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC---CCcEEEeeccCcccccc
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVEH  505 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~---~~~~kl~DfGla~~~~~  505 (645)
                      |.+ +.||++++.-..+.++....+.++-|++.-++|+|.   ++++||||||+|.|..-   ...+.++|||+++.+..
T Consensus        91 dLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d  166 (341)
T KOG1163|consen   91 DLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD  166 (341)
T ss_pred             ecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence            998 889999887667789999999999999999999998   99999999999999953   34588999999987643


Q ss_pred             c------CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccc
Q 042831          506 A------KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL  579 (645)
Q Consensus       506 ~------~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~  579 (645)
                      .      .........||.+|.+-....+...+.+.|+-|+|.+|..+-.|..||++........-.+.+    .+.++ 
T Consensus       167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI----~EkK~-  241 (341)
T KOG1163|consen  167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKI----SEKKM-  241 (341)
T ss_pred             ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHH----HHhhc-
Confidence            2      223345678999999988777778899999999999999999999999876654332222222    12222 


Q ss_pred             cccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 042831          580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSI  616 (645)
Q Consensus       580 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  616 (645)
                      ...-..+|..++.+..-    .+.-|-..--++-|..
T Consensus       242 s~~ie~LC~G~P~EF~m----yl~Y~R~L~F~E~Pdy  274 (341)
T KOG1163|consen  242 STPIEVLCKGFPAEFAM----YLNYCRGLGFEEKPDY  274 (341)
T ss_pred             CCCHHHHhCCCcHHHHH----HHHHHhhcCCCCCCcH
Confidence            11223456666554322    2234555555555643

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=5.8e-22  Score=221.85  Aligned_cols=259  Identities=23%  Similarity=0.230  Sum_probs=193.0

Q ss_pred             CCCCccCcCCcEEEEEEEEcCCCeEEEEEEec----c-CC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          355 NDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS----Q-GS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       355 ~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~----~-~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ...+.+|.|++|.|+...........+.|.+.    . .. .+....+..|+.+-..++|+|++..+..+.+.....-+|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            35678999999988887776555555555432    1 11 122233667888888899999998888877766666669


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |||++ +|...+... ..+....+..+++|+..|+.|||.   .|+.|||+|++|++++.++.+||+|||.+..+.....
T Consensus       401 E~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e  475 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE  475 (601)
T ss_pred             hcccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence            99999 999888543 467888899999999999999999   9999999999999999999999999999987765444


Q ss_pred             c---ceeecccCccccCccccccCCCCc-chhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          509 S---QTTVLAGTMGYMAPECATTGKASK-ESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       509 ~---~~~~~~gt~~y~aPE~~~~~~~t~-~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      .   ......|...|+|||.+...++.+ ..||||.|+++..|++|+.||......++.. .+      ..+.-...+..
T Consensus       476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-~~------~~~~~~~~~~~  548 (601)
T KOG0590|consen  476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-KT------NNYSDQRNIFE  548 (601)
T ss_pred             hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-hh------hcccccccccc
Confidence            3   345578899999999999988865 5799999999999999999998665543321 00      00000000000


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      . ..........+...++..+|++||.+|.||++|++.-|+.
T Consensus       549 ~-~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~  589 (601)
T KOG0590|consen  549 G-PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIR  589 (601)
T ss_pred             C-hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhh
Confidence            0 0011122335566778899999999999999999998865

>cd07308 lectin_leg-like legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47

Probab=99.83  E-value=5.3e-19  Score=174.97  Aligned_cols=184  Identities=24%  Similarity=0.230  Sum_probs=132.5

Q ss_pred             CCCeEEe-ecccCCCCcEecCC-CCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCCCCeEEEEEccCCCC
Q 042831           47 DDNITYE-RAYPDSNRVIQLPA-NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSK  124 (645)
Q Consensus        47 ~~~~~~~-~a~~~~~~~~~Lt~-~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~GlaF~l~p~~~~  124 (645)
                      ..++.+. +|.+ .++.|+||+ ..++.|+++|+.|+++        .+|+|+|+|.|.+.. ..+||||||+++|... 
T Consensus        19 ~~~w~~~G~a~~-~~~~i~LT~~~~~~~G~~~~~~pi~~--------~~F~~~f~F~i~~~~-~~~gdG~af~~~~~~~-   87 (218)
T cd07308          19 IGNWTVGGSTVI-TKNYIRLTPDVPSQSGSLWSRVPIPA--------KDFEIEVEFSIHGGS-GLGGDGFAFWYTEEPG-   87 (218)
T ss_pred             cCCeEEcCCeEE-eCCEEEeCCCCCCCEeEEEeCCCccC--------CCEEEEEEEEEeCCC-CCCCCEEEEEEECCCC-
Confidence            4478888 8888 588999999 6779999999999998        589999999998764 5579999999999753 


Q ss_pred             CCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCc-c-----------cceeeecccCCCCce
Q 042831          125 IPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVK-S-----------KKNVSWWSDVKSGRR  192 (645)
Q Consensus       125 ~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~-s-----------~~~~~~~~~~~~g~~  192 (645)
                          ..|+.+|.-+       ..+-+||||||+.|. +-..++|.+-+|.-. +           .....+... .+++.
T Consensus        88 ----~~g~~~G~~~-------~~~Glai~fdt~~n~-~~~~p~i~~~~Ndg~~~~~~~~d~~~~~~~~c~~~~~-~~~~~  154 (218)
T cd07308          88 ----SDGPLFGGPD-------KFKGLAIFFDTYDND-GKGFPSISVFLNDGTKSYDYETDGEKLELASCSLKFR-NSNAP  154 (218)
T ss_pred             ----CCCcccccCC-------CCCEEEEEEEcCCCC-CCCCCeEEEEEeCCCceecccCCCccccccceeEecc-cCCCC
Confidence                2455555422       234499999999986 333445555444322 1           111122211 23789


Q ss_pred             eEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccceeeeEEEEEeecc
Q 042831          193 NEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFN  260 (645)
Q Consensus       193 ~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~wsf~  260 (645)
                      ++++|.|+  .+.|.|.+......   ...++..++.. .+++..|+||||+||...+.|.|++|...
T Consensus       155 ~~~~I~y~--~~~l~v~i~~~~~~---~~~~c~~~~~~-~l~~~~y~G~sA~tg~~~d~~dIls~~~~  216 (218)
T cd07308         155 TTLRISYL--NNTLKVDITYSEGN---NWKECFTVEDV-ILPSQGYFGFSAQTGDLSDNHDILSVHTY  216 (218)
T ss_pred             eEEEEEEE--CCEEEEEEeCCCCC---CccEEEEcCCc-ccCCCCEEEEEeccCCCcCcEEEEEEEee
Confidence            99999999  68999999754321   22344444432 45778999999999999999999999763

The legume-like (leg-like) lectins are eukaryotic intracellular sugar transport proteins with a carbohydrate recognition domain similar to that of the legume lectins. This domain binds high-mannose-type oligosaccharides for transport from the endoplasmic reticulum to the Golgi complex. These leg-like lectins include ERGIC-53, ERGL, VIP36, VIPL, EMP46, EMP47, and the UIP5 (ULP1-interacting protein 5) precursor protein. Leg-like lectins have different intracellular distributions and dynamics in the endoplasmic reticulum-Golgi system of the secretory pathway and interact with N-glycans of glycoproteins in a calcium-dependent manner, suggesting a role in glycoprotein sorting and trafficking. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "ba

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.82  E-value=5.1e-20  Score=178.23  Aligned_cols=140  Identities=16%  Similarity=0.105  Sum_probs=108.3

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChh--h-------HH-----------------HHHHHHHHHHhcCCCC
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ--G-------IK-----------------EYASEVKIISRLRHRN  410 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~--~-------~~-----------------~~~~Ei~~l~~l~H~n  410 (645)
                      ...||+|++|.||+|.+. +|+.||||+++.....  .       ..                 ....|++.+.++.+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999999987 7999999998654211  1       11                 2234999999998877


Q ss_pred             ccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHH-HhhcCCCeeeccCCCCCeEECCC
Q 042831          411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYL-QEEWEQCVVHRDIKSSNIMLDSN  489 (645)
Q Consensus       411 lv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~Dlkp~NILld~~  489 (645)
                      +.....+..  ...+|||||++++++...... ...+++.....++.|++.+|.|| |+   .+|+||||||+|||++ +
T Consensus        81 v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIli~-~  153 (190)
T cd05147          81 IPCPEPILL--KSHVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLLYH-D  153 (190)
T ss_pred             CCCCcEEEe--cCCEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEE-C
Confidence            643322222  223899999998877654332 35688999999999999999999 56   7999999999999998 4


Q ss_pred             CcEEEeeccCccccc
Q 042831          490 FNAKIGDFGLARLVE  504 (645)
Q Consensus       490 ~~~kl~DfGla~~~~  504 (645)
                      +.++|+|||++...+
T Consensus       154 ~~v~LiDFG~a~~~~  168 (190)
T cd05147         154 GKLYIIDVSQSVEHD  168 (190)
T ss_pred             CcEEEEEccccccCC
Confidence            789999999997543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.80  E-value=1.3e-19  Score=194.07  Aligned_cols=214  Identities=26%  Similarity=0.383  Sum_probs=164.3

Q ss_pred             HHhcCCCCccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCC
Q 042831          403 ISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS  482 (645)
Q Consensus       403 l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~  482 (645)
                      |+.+.|.|+.+++|.|.++...+.|.+||..|+|.+.+......++|.....++++|+.||.|||.  ++-..|+.++++
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~--s~i~~hg~l~s~   78 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHN--SPIGYHGALKSS   78 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhc--Ccceeeeeeccc
Confidence            356889999999999999999999999999999999998888899999999999999999999998  344499999999


Q ss_pred             CeEECCCCcEEEeeccCccccccc-CCcceeecccCccccCccccccCC-------CCcchhHHHHHHHHHHHHcCCCCC
Q 042831          483 NIMLDSNFNAKIGDFGLARLVEHA-KGSQTTVLAGTMGYMAPECATTGK-------ASKESDVYSFGIVALEIACGRKPI  554 (645)
Q Consensus       483 NILld~~~~~kl~DfGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~-------~t~~sDV~SfGvll~elltG~~pf  554 (645)
                      |.++|....+||+|||+....... .........-..-|.|||.+....       .+.+.||||||++++|+++.+.||
T Consensus        79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~  158 (484)
T KOG1023|consen   79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF  158 (484)
T ss_pred             cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence            999999999999999998765421 111111122345699999887641       467899999999999999999999


Q ss_pred             CCCCCCCc-hhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          555 NPKAPQGQ-VSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       555 ~~~~~~~~-~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ........ ..++.++..     .....+.|.+....  +....++.++..||..+|++||++++|-..+..
T Consensus       159 ~~~~~~~~~~eii~~~~~-----~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~  223 (484)
T KOG1023|consen  159 DLRNLVEDPDEIILRVKK-----GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLT  223 (484)
T ss_pred             ccccccCChHHHHHHHHh-----cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhh
Confidence            86543322 234433322     11112223222111  233468889999999999999999999887764

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.80  E-value=8.2e-20  Score=179.26  Aligned_cols=171  Identities=13%  Similarity=0.123  Sum_probs=131.0

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhh---HHH------HHHHHHHHHhcCCCCccEEEeeeee
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQG---IKE------YASEVKIISRLRHRNLVQLLGWCHE  420 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~---~~~------~~~Ei~~l~~l~H~nlv~l~~~~~~  420 (645)
                      ..++|...+.||.|+||.||+...  ++..+|+|.+.......   ...      +.+|+..+.+++|++|..+.+++..
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~  106 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL  106 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence            457899999999999999999654  36679999986542221   122      6799999999999999999888553


Q ss_pred             C--------CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcE
Q 042831          421 K--------KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA  492 (645)
Q Consensus       421 ~--------~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~  492 (645)
                      .        +..+|||||++|.+|.++..     ++.    ....+++.+|..||.   .+++|||++|+||+++.++ +
T Consensus       107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~~~g-i  173 (232)
T PRK10359        107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIVSKNG-L  173 (232)
T ss_pred             cccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEEeCCC-E
Confidence            2        35799999999999977631     222    345689999999998   9999999999999999888 9


Q ss_pred             EEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHH
Q 042831          493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA  548 (645)
Q Consensus       493 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ell  548 (645)
                      +|+|||...........             ..++....+..++|+|+||+.+.-+.
T Consensus       174 ~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        174 RIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             EEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence            99999988654221111             01334445667899999999886553

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.80  E-value=7.1e-19  Score=170.57  Aligned_cols=142  Identities=18%  Similarity=0.160  Sum_probs=111.2

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChh--------------------------hHHHHHHHHHHHHhcCCCC
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ--------------------------GIKEYASEVKIISRLRHRN  410 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~Ei~~l~~l~H~n  410 (645)
                      ...||+|++|.||+|.+. +|+.||||+++.....                          ....+..|.+.+.+++|++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            468999999999999987 7999999998754211                          0122357899999999998


Q ss_pred             ccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC
Q 042831          411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF  490 (645)
Q Consensus       411 lv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~  490 (645)
                      +.....+...  ..+|||||++++++..... ....++......++.|++.+|.+||+  +.+|+||||||+|||++ ++
T Consensus        81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l-~~~~~~~~~~~~i~~~l~~~l~~lH~--~~givHrDlkP~NIll~-~~  154 (190)
T cd05145          81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRL-KDVPLEEEEAEELYEQVVEQMRRLYQ--EAGLVHGDLSEYNILYH-DG  154 (190)
T ss_pred             CCCceEEEec--CCEEEEEEecCCCchhhhh-hhccCCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCChhhEEEE-CC
Confidence            7544333322  2489999999886544322 23457788899999999999999997  37999999999999999 78


Q ss_pred             cEEEeeccCcccccc
Q 042831          491 NAKIGDFGLARLVEH  505 (645)
Q Consensus       491 ~~kl~DfGla~~~~~  505 (645)
                      .++|+|||++....+
T Consensus       155 ~~~liDFG~a~~~~~  169 (190)
T cd05145         155 KPYIIDVSQAVELDH  169 (190)
T ss_pred             CEEEEEcccceecCC
Confidence            999999999986543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.79  E-value=1.2e-18  Score=176.04  Aligned_cols=230  Identities=19%  Similarity=0.255  Sum_probs=150.2

Q ss_pred             CCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCC----------CCccEEEeeee--
Q 042831          355 NDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRH----------RNLVQLLGWCH--  419 (645)
Q Consensus       355 ~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H----------~nlv~l~~~~~--  419 (645)
                      ...+.||.|+++.||.+++.++|+.+|+|.+...   .....+++.+|.-....+.+          -.++--++...  
T Consensus        15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~   94 (288)
T PF14531_consen   15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP   94 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred             EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence            4467899999999999999999999999987543   33456777777755555432          12222222221  


Q ss_pred             -------eC---C-----eEEEEEEecCCCChhhhhh---hcCC---CCCHHHHHHHHHHHHHHHHHHHhhcCCCeeecc
Q 042831          420 -------EK---K-----ELLLVYEFMPNGSLDSHLF---KENS---LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD  478 (645)
Q Consensus       420 -------~~---~-----~~~lV~Ey~~~gsL~~~l~---~~~~---~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~D  478 (645)
                             ..   +     ..+++|+-+ .++|.+.+.   ....   .+....+..+..|+++.+++||+   .|++|+|
T Consensus        95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVHgd  170 (288)
T PF14531_consen   95 GKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS---YGLVHGD  170 (288)
T ss_dssp             TS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEEEST
T ss_pred             CCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh---cceEecc
Confidence                   11   1     236778877 678877653   2222   34556777888999999999999   9999999


Q ss_pred             CCCCCeEECCCCcEEEeeccCcccccccCCcceeecccCccccCcccccc--------CCCCcchhHHHHHHHHHHHHcC
Q 042831          479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT--------GKASKESDVYSFGIVALEIACG  550 (645)
Q Consensus       479 lkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~t~~sDV~SfGvll~elltG  550 (645)
                      |+|+|++++.+|.++|+||+.......    .......+..|.+||....        -.++.+.|.|++|+++|.|+||
T Consensus       171 i~~~nfll~~~G~v~Lg~F~~~~r~g~----~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~  246 (288)
T PF14531_consen  171 IKPENFLLDQDGGVFLGDFSSLVRAGT----RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG  246 (288)
T ss_dssp             -SGGGEEE-TTS-EEE--GGGEEETTE----EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred             cceeeEEEcCCCCEEEcChHHHeecCc----eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence            999999999999999999988764332    1111345577999997643        2478899999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCC
Q 042831          551 RKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR  613 (645)
Q Consensus       551 ~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R  613 (645)
                      +.||..........   |                .+ ..+. +-.+.+..|+..+|+++|++|
T Consensus       247 ~lPf~~~~~~~~~~---~----------------~f-~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  247 RLPFGLSSPEADPE---W----------------DF-SRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             S-STCCCGGGSTSG---G----------------GG-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             cCCCCCCCcccccc---c----------------cc-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence            99998544321110   0                11 1223 445667778899999999988

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.78  E-value=1e-19  Score=203.36  Aligned_cols=251  Identities=20%  Similarity=0.206  Sum_probs=178.6

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHH--HHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKI--ISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~--l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ++...+.||++.|=+|.+|++.+ |. |+||++-+.. .-..+.|.++++-  ...++|||.+++.-+....+..|||-+
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRq  101 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQ  101 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHH
Confidence            56667899999999999999976 44 8899875543 3334444443333  455689999999888777777788888


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc--ccC
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE--HAK  507 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~--~~~  507 (645)
                      |. .-+|.+.+. .+..+...+.+-|+.|++.||..+|.   .+|+|+|||.+|||++.-.-+.|+||..-+..-  +..
T Consensus       102 yv-khnLyDRlS-TRPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN  176 (1431)
T KOG1240|consen  102 YV-KHNLYDRLS-TRPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN  176 (1431)
T ss_pred             HH-hhhhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence            88 457888773 34567778888999999999999999   999999999999999999999999998765331  111


Q ss_pred             Ccceeec----ccCccccCccccccC----------C-CCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHH
Q 042831          508 GSQTTVL----AGTMGYMAPECATTG----------K-ASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWD  571 (645)
Q Consensus       508 ~~~~~~~----~gt~~y~aPE~~~~~----------~-~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~  571 (645)
                      ......+    ..-.+|+|||.+...          . .+++-||||+||++.||++ |++||+-         .+ ...
T Consensus       177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L---------SQ-L~a  246 (1431)
T KOG1240|consen  177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL---------SQ-LLA  246 (1431)
T ss_pred             cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH---------HH-HHh
Confidence            1122222    233579999976431          1 5788999999999999988 8888861         21 111


Q ss_pred             HhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          572 LYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       572 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                       ++.|. ......-+ ..++.   ..+..+++.|++.||.+|-++++.|+.-.+.
T Consensus       247 -Yr~~~-~~~~e~~L-e~Ied---~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~  295 (1431)
T KOG1240|consen  247 -YRSGN-ADDPEQLL-EKIED---VSLRNLILSMIQRDPSKRLSAEDYLQKYRGL  295 (1431)
T ss_pred             -HhccC-ccCHHHHH-HhCcC---ccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence             12221 00000001 11111   1456788999999999999999999986553

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.78  E-value=2.8e-18  Score=165.00  Aligned_cols=187  Identities=13%  Similarity=0.043  Sum_probs=139.7

Q ss_pred             CCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChh----hHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeEEEEEE
Q 042831          355 NDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ----GIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       355 ~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~----~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .....|++|+||+||.+..  .+..++.+.+.....-    ....+.+|+++|.+|+ |+++++++++    +..+++||
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme   78 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS   78 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence            3467899999999997755  4677887777554331    1235789999999996 5889999887    34699999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccC-CCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDI-KSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dl-kp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |+.+.+|...+..        ....++.|++++|.++|.   ++|+|||| ||+|||++.++.++|+|||++........
T Consensus        79 yI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~  147 (218)
T PRK12274         79 YLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR  147 (218)
T ss_pred             eecCccHHhhhhh--------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence            9999988654311        123577899999999999   99999999 79999999999999999999985543221


Q ss_pred             c----c--------eeecccCccccCccccccC-CCC-cchhHHHHHHHHHHHHcCCCCCCCCC
Q 042831          509 S----Q--------TTVLAGTMGYMAPECATTG-KAS-KESDVYSFGIVALEIACGRKPINPKA  558 (645)
Q Consensus       509 ~----~--------~~~~~gt~~y~aPE~~~~~-~~t-~~sDV~SfGvll~elltG~~pf~~~~  558 (645)
                      .    .        ......++.|++|+...-- ..+ ...+.++-|+-+|.++|++.+.-.+.
T Consensus       148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence            0    0        0113367788888854332 223 56789999999999999998865433

>PRK10345 hypothetical protein; Provisional

Probab=99.77  E-value=5.4e-18  Score=165.82  Aligned_cols=137  Identities=19%  Similarity=0.217  Sum_probs=108.9

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-----CCCCccEEEeeeeeCC---e-E
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-----RHRNLVQLLGWCHEKK---E-L  424 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-----~H~nlv~l~~~~~~~~---~-~  424 (645)
                      ++..++||+|+||.||.  +..++.. +||++........+++.+|+.++.++     .||||++++|++..+.   . +
T Consensus         4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~   80 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY   80 (210)
T ss_pred             cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence            44578899999999996  6666655 69988765455567899999999999     5799999999998763   4 3


Q ss_pred             EEEEEe--cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHH-HHHHhhcCCCeeeccCCCCCeEECC----CCcEEEeec
Q 042831          425 LLVYEF--MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGL-LYLQEEWEQCVVHRDIKSSNIMLDS----NFNAKIGDF  497 (645)
Q Consensus       425 ~lV~Ey--~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~ivH~Dlkp~NILld~----~~~~kl~Df  497 (645)
                      .+|+||  +++++|.+++.+.  .+++.  ..++.+++.++ .|||+   .+|+||||||+|||++.    +..++|+|+
T Consensus        81 ~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~~LiDg  153 (210)
T PRK10345         81 DVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIPVVCDN  153 (210)
T ss_pred             EEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence            478999  5589999999543  35555  35677788777 99999   99999999999999974    347999995


Q ss_pred             cCc
Q 042831          498 GLA  500 (645)
Q Consensus       498 Gla  500 (645)
                      +-+
T Consensus       154 ~G~  156 (210)
T PRK10345        154 IGE  156 (210)
T ss_pred             CCC
Confidence            433

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.71  E-value=1.7e-18  Score=185.50  Aligned_cols=187  Identities=27%  Similarity=0.330  Sum_probs=151.9

Q ss_pred             ccCcCCcEEEEEEEE---cCCCeEEEEEEeccCChh--hHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeEEEEEEecC
Q 042831          359 KLGQGGFGGVYKGFF---RETNSYIAVKRVSQGSKQ--GIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLLVYEFMP  432 (645)
Q Consensus       359 ~LG~G~fG~Vy~g~~---~~~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~~lV~Ey~~  432 (645)
                      .+|+|.||.|++++-   .+.|..+|+|...+....  .......|..++...+ ||.++++.-.++.+...+++.+|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            379999999987643   244677888877543211  1114456778888887 9999999999999999999999999


Q ss_pred             CCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCccee
Q 042831          433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT  512 (645)
Q Consensus       433 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~  512 (645)
                      +|.|...+.+. ..............++-++.++|+   .+++|||+|++||+++.+|.+++.|||+++..-.....   
T Consensus        81 gg~lft~l~~~-~~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~---  153 (612)
T KOG0603|consen   81 GGDLFTRLSKE-VMFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA---  153 (612)
T ss_pred             cchhhhccccC-CchHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhhhc---
Confidence            99998888544 334555555666778889999998   99999999999999999999999999999865432222   


Q ss_pred             ecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCC
Q 042831          513 VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINP  556 (645)
Q Consensus       513 ~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~  556 (645)
                        +||..|||||++.  ....++|.||||++++||++|..||..
T Consensus       154 --cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  154 --CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             --ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence              7999999999998  567889999999999999999999975

>smart00090 RIO RIO-like kinase

Probab=99.71  E-value=8.4e-17  Score=161.08  Aligned_cols=145  Identities=19%  Similarity=0.224  Sum_probs=113.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEE-EcCCCeEEEEEEeccCChh------------------------hHHHHHHHHHHHHh
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGF-FRETNSYIAVKRVSQGSKQ------------------------GIKEYASEVKIISR  405 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~-~~~~~~~vavK~~~~~~~~------------------------~~~~~~~Ei~~l~~  405 (645)
                      ...|...+.||+|++|.||+|. +..+|+.||+|.++.....                        ....+..|+..+.+
T Consensus        27 ~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~  106 (237)
T smart00090       27 GILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR  106 (237)
T ss_pred             CchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            3357888999999999999998 6567999999998643210                        01235689999999


Q ss_pred             cCCC--CccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCC-eeeccCCCC
Q 042831          406 LRHR--NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC-VVHRDIKSS  482 (645)
Q Consensus       406 l~H~--nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivH~Dlkp~  482 (645)
                      +.+.  .+.+++++    ...++||||+++++|....... ..+.......++.|++.+|.+||.   .+ ++||||||+
T Consensus       107 L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dikp~  178 (237)
T smart00090      107 LYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLYK---EGELVHGDLSEY  178 (237)
T ss_pred             HHhcCCCCCeeeEe----cCceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCChh
Confidence            9753  34455543    2348999999998887655332 345566678999999999999998   88 999999999


Q ss_pred             CeEECCCCcEEEeeccCccccc
Q 042831          483 NIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       483 NILld~~~~~kl~DfGla~~~~  504 (645)
                      ||+++ ++.++|+|||.+....
T Consensus       179 NIli~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      179 NILVH-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             hEEEE-CCCEEEEEChhhhccC
Confidence            99999 8899999999987543

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.71  E-value=1e-16  Score=157.90  Aligned_cols=134  Identities=18%  Similarity=0.278  Sum_probs=112.8

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh--------hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK--------QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      +.||+|++|.||+|.+  .|..+++|.......        .....+.+|++++..++|+++.....++...+..++|||
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e   79 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME   79 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence            5799999999999988  366789997653221        112457889999999999998877777777788899999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      |+++++|.+++....    + .+..++.+++.+|.+||+   .+++|+|++|.|||++ ++.++|+|||.+..
T Consensus        80 ~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         80 YIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             EeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            999999999885422    2 788999999999999998   8999999999999999 78999999999864

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.70  E-value=1.1e-16  Score=182.95  Aligned_cols=201  Identities=17%  Similarity=0.231  Sum_probs=161.5

Q ss_pred             hHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC---CCCccEEEeeeee
Q 042831          344 YKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR---HRNLVQLLGWCHE  420 (645)
Q Consensus       344 ~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~---H~nlv~l~~~~~~  420 (645)
                      ..+.......|.+.+.||+|+||+||+|...+ |+.||+|.-+..+..   +|.--.+++.||+   -+.+..+.....-
T Consensus       690 ~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~  765 (974)
T KOG1166|consen  690 NTEFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVF  765 (974)
T ss_pred             cceeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHcc
Confidence            34556666789999999999999999999987 999999987655432   2222334455555   1233344444445


Q ss_pred             CCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC-------CCCcEE
Q 042831          421 KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD-------SNFNAK  493 (645)
Q Consensus       421 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld-------~~~~~k  493 (645)
                      .+..+||+||.+.|+|.+++. ..+.++|.....++.|++..+..||.   .+|||+||||+|.||.       ++.-++
T Consensus       766 ~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~l~  841 (974)
T KOG1166|consen  766 QNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKGLY  841 (974)
T ss_pred             CCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccceE
Confidence            677799999999999999995 66789999999999999999999999   9999999999999993       344589


Q ss_pred             EeeccCcccccccC-CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCC
Q 042831          494 IGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRK  552 (645)
Q Consensus       494 l~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~  552 (645)
                      |+|||-+-.+..-. .......++|-.+-.+|...+...+.+.|.|.+..+++-|+.|+.
T Consensus       842 lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  842 LIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             EEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            99999986554332 335667889999999999999999999999999999999999973

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.69  E-value=2.1e-16  Score=154.28  Aligned_cols=145  Identities=16%  Similarity=0.180  Sum_probs=112.2

Q ss_pred             HHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh----------------------hhHHHHHHHHHHH
Q 042831          346 ELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK----------------------QGIKEYASEVKII  403 (645)
Q Consensus       346 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~Ei~~l  403 (645)
                      ++......|...+.||+|+||.||++... +|+.||||++.....                      .....+..|+.++
T Consensus         9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   87 (198)
T cd05144           9 TLVKRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL   87 (198)
T ss_pred             HHHHcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence            44444445778899999999999999885 689999998754320                      0112356789999


Q ss_pred             HhcCCC--CccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCC
Q 042831          404 SRLRHR--NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKS  481 (645)
Q Consensus       404 ~~l~H~--nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp  481 (645)
                      .++.|+  .+.+.++.    ...++||||+++++|......       .....++.+++.++.++|+   .+++||||||
T Consensus        88 ~~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p  153 (198)
T cd05144          88 KALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAYK---HGIIHGDLSE  153 (198)
T ss_pred             HHHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHHH---CCCCcCCCCc
Confidence            999877  44555443    345899999999998765421       3356788999999999998   8999999999


Q ss_pred             CCeEECCCCcEEEeeccCcccccc
Q 042831          482 SNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       482 ~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +||++++++.++|+|||++.....
T Consensus       154 ~Nill~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         154 FNILVDDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             ccEEEcCCCcEEEEECCccccCCC
Confidence            999999999999999999965443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.68  E-value=2.3e-16  Score=177.22  Aligned_cols=140  Identities=18%  Similarity=0.274  Sum_probs=113.8

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEe-ccC-C------hhhHHHHHHHHHHHHhcCCCCccEEEeeeee
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRV-SQG-S------KQGIKEYASEVKIISRLRHRNLVQLLGWCHE  420 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~-~~~-~------~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~  420 (645)
                      .....|...++||+|+||.||+|.+.+..  +++|+. ... .      ....+.+.+|++++.+++|++++....++..
T Consensus       330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~  407 (535)
T PRK09605        330 EVKRRKIPDHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD  407 (535)
T ss_pred             ccccccCccceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe
Confidence            33445667899999999999999886533  444432 111 1      1123568899999999999999988888887


Q ss_pred             CCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCc
Q 042831          421 KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA  500 (645)
Q Consensus       421 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla  500 (645)
                      ....++||||+++++|.+++.         ....++.+++++|.|||+   .+++||||||+|||+ +++.++|+|||++
T Consensus       408 ~~~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDFGla  474 (535)
T PRK09605        408 PEEKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDFGLG  474 (535)
T ss_pred             CCCCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeCccc
Confidence            778899999999999998874         356799999999999998   899999999999999 6779999999999


Q ss_pred             ccc
Q 042831          501 RLV  503 (645)
Q Consensus       501 ~~~  503 (645)
                      +..
T Consensus       475 ~~~  477 (535)
T PRK09605        475 KYS  477 (535)
T ss_pred             ccC
Confidence            753

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.68  E-value=3.1e-16  Score=153.05  Aligned_cols=130  Identities=19%  Similarity=0.295  Sum_probs=106.2

Q ss_pred             ccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--------hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--------KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       359 ~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--------~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .||+|++|.||+|.+.  +..|++|......        .....++.+|++++..++|+++.....++...+..++||||
T Consensus         1 ~ig~G~~~~vy~~~~~--~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   78 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL--GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY   78 (199)
T ss_pred             CCCCCceEEEEEeecC--CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence            4899999999999854  5779999854321        11235677899999999988766555555666777999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      +++++|.+.+.....        .++.+++.+|.+||+   .+++|+|++|.||+++ ++.+++.|||+++.
T Consensus        79 ~~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        79 IEGKPLKDVIEEGND--------ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             ECCccHHHHHhhcHH--------HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            999999987743211        789999999999998   9999999999999999 88999999999865

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.65  E-value=2.6e-17  Score=173.30  Aligned_cols=175  Identities=23%  Similarity=0.361  Sum_probs=131.0

Q ss_pred             CeEEEEEEecCCCChhhhhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccC
Q 042831          422 KELLLVYEFMPNGSLDSHLFKE--NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL  499 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGl  499 (645)
                      .++++.|++|...+|.++|..+  ....++.....++.|++.|+.|      ++.+|+|+||.||+...+..+||+|||+
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl  402 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGL  402 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhh
Confidence            3579999999999999999643  4567888999999999999999      6799999999999999999999999999


Q ss_pred             cccccccC-----CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHh
Q 042831          500 ARLVEHAK-----GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLY  573 (645)
Q Consensus       500 a~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~  573 (645)
                      ........     ....+...||..||+||.+.+..|+.++||||||++|+||+. =..+++...          ...-+
T Consensus       403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~----------t~~d~  472 (516)
T KOG1033|consen  403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIA----------TLTDI  472 (516)
T ss_pred             eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHH----------hhhhh
Confidence            87665443     234456789999999999999999999999999999999986 222222100          11111


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIH  621 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  621 (645)
                      ++|.+    +|....+++.     =..+.++++++.|.+||+..++-.
T Consensus       473 r~g~i----p~~~~~d~p~-----e~~ll~~lls~~p~~RP~~~~~~~  511 (516)
T KOG1033|consen  473 RDGII----PPEFLQDYPE-----EYTLLQQLLSPSPEERPSAIEVAL  511 (516)
T ss_pred             hcCCC----ChHHhhcCcH-----HHHHHHHhcCCCcccCchHHHHhh
Confidence            22222    2222222221     124567899999999996555443

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.64  E-value=1.2e-16  Score=179.16  Aligned_cols=209  Identities=24%  Similarity=0.281  Sum_probs=144.0

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ..+|+.++.+..|++|.||..+++.+.+.+|+|. .+++--     .+-  ++.....|.+|                  
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~li-----lRn--ilt~a~npfvv------------------  135 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNLI-----LRN--ILTFAGNPFVV------------------  135 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhcc-cccchh-----hhc--cccccCCccee------------------
Confidence            4689999999999999999999999999999953 222110     000  22222334433                  


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC---
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK---  507 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~---  507 (645)
                         |+-...+.. -+.++..        ++.+++|||+   .+|+|||+||+|.+++.-|.+|++|||+.+......   
T Consensus       136 ---gDc~tllk~-~g~lPvd--------mvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn  200 (1205)
T KOG0606|consen  136 ---GDCATLLKN-IGPLPVD--------MVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN  200 (1205)
T ss_pred             ---chhhhhccc-CCCCcch--------hhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence               444444422 2334333        2678999999   999999999999999999999999999987432111   


Q ss_pred             -----------CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC
Q 042831          508 -----------GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG  576 (645)
Q Consensus       508 -----------~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~  576 (645)
                                 .-....++||+.|+|||++....|....|.|++|+++||.+-|+.||..+.+++.   ...+...  ..
T Consensus       201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel---fg~visd--~i  275 (1205)
T KOG0606|consen  201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL---FGQVISD--DI  275 (1205)
T ss_pred             hhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH---Hhhhhhh--hc
Confidence                       1112346899999999999999999999999999999999999999998766532   2211110  11


Q ss_pred             ccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCC
Q 042831          577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRP  614 (645)
Q Consensus       577 ~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP  614 (645)
                      .+.+- |..+        ..+...++...|+.+|..|-
T Consensus       276 ~wpE~-dea~--------p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  276 EWPEE-DEAL--------PPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             ccccc-CcCC--------CHHHHHHHHHHHHhChHhhc
Confidence            11111 2222        22344556677888998885

>cd06901 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembrane proteins, lectin domain

Probab=99.64  E-value=1.4e-14  Score=144.26  Aligned_cols=188  Identities=19%  Similarity=0.194  Sum_probs=123.9

Q ss_pred             CCCeEEe-ecccCCCCcEecCC-CCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCCCCeEEEEEccCCCC
Q 042831           47 DDNITYE-RAYPDSNRVIQLPA-NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSK  124 (645)
Q Consensus        47 ~~~~~~~-~a~~~~~~~~~Lt~-~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~GlaF~l~p~~~~  124 (645)
                      .+++.+. +|.+ .++.|+||+ ..++.|++||+.|+++        .+|+|+|+|.|.+.....+||||||+++.... 
T Consensus        19 i~~w~~~G~a~v-~~~~IrLTp~~~~~~G~~w~~~p~~~--------~~F~~~f~F~I~~~~~~~~GdGlAfw~t~~~~-   88 (248)
T cd06901          19 MPLWDFLGSTMV-TSQYIRLTPDHQSKQGSIWNRVPCYL--------RDWEMHVHFKVHGSGKNLFGDGFAIWYTKERM-   88 (248)
T ss_pred             CCCEEEcceEEE-cCCeEEECCCCCCCEEEEeccCCccC--------CCEEEEEEEEEeCCCCCCCCCEEEEEEEcCCC-
Confidence            4578998 8888 467999999 5568999999999998        67999999999987666789999999998752 


Q ss_pred             CCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCC---CCCCceeeecCCC-ccc---------ceeeecccC-CCC
Q 042831          125 IPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWD---PTFSHVGIDINSV-KSK---------KNVSWWSDV-KSG  190 (645)
Q Consensus       125 ~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d---~~~~hvgidvns~-~s~---------~~~~~~~~~-~~g  190 (645)
                          ..|..+|-.+.-   +    =+||-|||+.|...   ...+-|.+-+|.- ...         .-..+.... ..+
T Consensus        89 ----~~G~~fG~~~~f---~----Gl~I~~Dt~~n~~~~~~~~~P~i~~~~NDGt~~yd~~~Dg~~~~~~~C~~~~rn~~  157 (248)
T cd06901          89 ----QPGPVFGSKDNF---H----GLAIFFDTYSNQNGEHEHVHPYISAMVNNGSLSYDHDRDGTHTELAGCSAPFRNKD  157 (248)
T ss_pred             ----ccCcccccCCCC---c----eEEEEEECCCCCCCcccCCCceEEEEEcCCCeeecccCCCchhhcCceeeeccCCC
Confidence                234445532221   1    18999999988521   2223343333331 110         001122222 245


Q ss_pred             ceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccceeeeEEEEEeeccC
Q 042831          191 RRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNS  261 (645)
Q Consensus       191 ~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~wsf~~  261 (645)
                      ...+++|.|...  .+.|.+...+.....   ....+ -.-.||...|+||||+||...+.|.|++-.+..
T Consensus       158 ~~t~~rI~Y~~~--~l~v~vd~~~~~~w~---~Cf~~-~~v~LP~~~yfGiSA~Tg~~sd~hdIlsv~~~~  222 (248)
T cd06901         158 HDTFVAIRYSKG--RLTVMTDIDGKNEWK---ECFDV-TGVRLPTGYYFGASAATGDLSDNHDIISMKLYE  222 (248)
T ss_pred             CCeEEEEEEECC--eEEEEEecCCCCcee---eeEEe-CCeecCCCCEEEEEecCCCCCCcEEEEEEEEec
Confidence            567899999964  577777643321111   22222 122356679999999999988999987665543

The vesicular integral protein of 36 kDa (VIP36) is a type 1 transmembrane protein of the mammalian early secretory pathway that acts as a cargo receptor transporting high mannose type glycoproteins between the Golgi and the endoplasmic reticulum (ER). Lectins of the early secretory pathway are involved in the selective transport of newly synthesized glycoproteins from the ER to the ER-Golgi intermediate compartment (ERGIC). The most prominent cycling lectin is the mannose-binding type1 membrane protein ERGIC-53, which functions as a cargo receptor to facilitate export of glycoproteins from the ER. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded she

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=9.9e-16  Score=155.10  Aligned_cols=196  Identities=25%  Similarity=0.296  Sum_probs=134.8

Q ss_pred             CCCCccEEEeeeee---------------------------CCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHH
Q 042831          407 RHRNLVQLLGWCHE---------------------------KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDL  459 (645)
Q Consensus       407 ~H~nlv~l~~~~~~---------------------------~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i  459 (645)
                      +|||||++.+.|.+                           ...+|+||.-+ .-+|..++..+  ..+.....-|+.|+
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~--~~s~r~~~~~laQl  350 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTR--HRSYRTGRVILAQL  350 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcC--CCchHHHHHHHHHH
Confidence            59999999887643                           34678999887 45888888543  35566677889999


Q ss_pred             HHHHHHHHhhcCCCeeeccCCCCCeEE--CCCC--cEEEeeccCccccccc-----CCcceeecccCccccCccccccCC
Q 042831          460 ASGLLYLQEEWEQCVVHRDIKSSNIML--DSNF--NAKIGDFGLARLVEHA-----KGSQTTVLAGTMGYMAPECATTGK  530 (645)
Q Consensus       460 a~gL~yLH~~~~~~ivH~Dlkp~NILl--d~~~--~~kl~DfGla~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~  530 (645)
                      ++|+.|||.   ++|.|||+|++|||+  |++.  ...|+|||.+-.-+..     -.+......|...-||||+....+
T Consensus       351 LEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P  427 (598)
T KOG4158|consen  351 LEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP  427 (598)
T ss_pred             HHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence            999999999   999999999999998  4444  4688999987532221     011223345777899999875432


Q ss_pred             ------CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHH
Q 042831          531 ------ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLW  604 (645)
Q Consensus       531 ------~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~  604 (645)
                            .-.|+|.|+.|.+.||++....||....+- ..+.-.     +.+..+     |.+..    .....+.+++..
T Consensus       428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem-~L~~r~-----Yqe~qL-----Palp~----~vpp~~rqlV~~  492 (598)
T KOG4158|consen  428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM-LLDTRT-----YQESQL-----PALPS----RVPPVARQLVFD  492 (598)
T ss_pred             CCceeeccchhhhhhhhhhHHHHhccCCcccccchh-eechhh-----hhhhhC-----CCCcc----cCChHHHHHHHH
Confidence                  246899999999999999999999752211 000000     111111     22222    222345677788


Q ss_pred             cCCCCCCCCCCHHHHHHHh
Q 042831          605 CAHPDENLRPSIRQVIHVL  623 (645)
Q Consensus       605 Cl~~dP~~RPs~~evl~~L  623 (645)
                      .|++||.+||+.+-....|
T Consensus       493 lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  493 LLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             HhcCCccccCCccHHHhHH
Confidence            9999999999876555444

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.62  E-value=5.4e-15  Score=136.35  Aligned_cols=135  Identities=22%  Similarity=0.163  Sum_probs=115.8

Q ss_pred             CCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCC--CCccEEEeeeeeCCeEEEEEEecCC
Q 042831          356 DDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH--RNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       356 ~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H--~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.+.||+|.++.||++...+  ..+++|.......  ...+.+|+..+..++|  .++++++++....+..++++||+++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g   77 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG   77 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence            35779999999999999864  6799998865443  4678899999999986  5899999998888899999999988


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      +.+..+        +......++.+++++|.+||.....+++|+|++|+||+++..+.+++.|||.++.
T Consensus        78 ~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          78 ETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             eecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            877654        5667788999999999999985556899999999999999989999999999864

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.58  E-value=1.2e-14  Score=140.44  Aligned_cols=138  Identities=22%  Similarity=0.251  Sum_probs=98.6

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChh--hHHH----------------------HHHHHHHHHhcCCCC--
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ--GIKE----------------------YASEVKIISRLRHRN--  410 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~Ei~~l~~l~H~n--  410 (645)
                      .+.||+|+||.||+|.+. +++.||||++......  ....                      ...|...+.++.+..  
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~   80 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP   80 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence            467999999999999987 6889999988653211  1111                      134566666665432  


Q ss_pred             ccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC
Q 042831          411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF  490 (645)
Q Consensus       411 lv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~  490 (645)
                      +.+.++.    ...++||||++++.+......... .. .....++.+++.++.++|.  +.+++|+||||+||+++ ++
T Consensus        81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-~~-~~~~~~~~~~~~~l~~lh~--~~~ivH~Dl~p~Nili~-~~  151 (187)
T cd05119          81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-LL-EDPEELYDQILELMRKLYR--EAGLVHGDLSEYNILVD-DG  151 (187)
T ss_pred             CCceEec----CCCEEEEEEeCCCCccChhhhhhh-hc-ccHHHHHHHHHHHHHHHhh--ccCcCcCCCChhhEEEE-CC
Confidence            4444443    245899999999654322111111 11 5677899999999999997  37899999999999999 89


Q ss_pred             cEEEeeccCccccc
Q 042831          491 NAKIGDFGLARLVE  504 (645)
Q Consensus       491 ~~kl~DfGla~~~~  504 (645)
                      .++|+|||.+....
T Consensus       152 ~~~liDfg~a~~~~  165 (187)
T cd05119         152 KVYIIDVPQAVEID  165 (187)
T ss_pred             cEEEEECccccccc
Confidence            99999999997543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.54  E-value=7.1e-14  Score=140.23  Aligned_cols=135  Identities=17%  Similarity=0.178  Sum_probs=105.0

Q ss_pred             CCccC-cCCcEEEEEEEEcCCCeEEEEEEeccCC-------------hhhHHHHHHHHHHHHhcCCCCc--cEEEeeeee
Q 042831          357 DQKLG-QGGFGGVYKGFFRETNSYIAVKRVSQGS-------------KQGIKEYASEVKIISRLRHRNL--VQLLGWCHE  420 (645)
Q Consensus       357 ~~~LG-~G~fG~Vy~g~~~~~~~~vavK~~~~~~-------------~~~~~~~~~Ei~~l~~l~H~nl--v~l~~~~~~  420 (645)
                      ...|| .||.|+||++...  +..++||++....             ......+.+|++++.+++|+++  ++.++++..
T Consensus        36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~  113 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV  113 (239)
T ss_pred             CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence            45687 8999999999875  5679999875321             1223567889999999998875  677776543


Q ss_pred             CC----eEEEEEEecCC-CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEe
Q 042831          421 KK----ELLLVYEFMPN-GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG  495 (645)
Q Consensus       421 ~~----~~~lV~Ey~~~-gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~  495 (645)
                      +.    ..++|+||+++ .+|.+++..  ..++..    .+.+++.+|.+||+   .+|+||||||.|||++.++.++|+
T Consensus       114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~--~~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~~~v~LI  184 (239)
T PRK01723        114 RHGLFYRADILIERIEGARDLVALLQE--APLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNILLDPDGKFWLI  184 (239)
T ss_pred             ecCcceeeeEEEEecCCCCCHHHHHhc--CCCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCCCCEEEE
Confidence            32    23599999997 688888743  234443    35789999999999   999999999999999998899999


Q ss_pred             eccCccc
Q 042831          496 DFGLARL  502 (645)
Q Consensus       496 DfGla~~  502 (645)
                      |||.+..
T Consensus       185 Dfg~~~~  191 (239)
T PRK01723        185 DFDRGEL  191 (239)
T ss_pred             ECCCccc
Confidence            9998864

>cd06902 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain

Probab=99.54  E-value=8.1e-13  Score=130.09  Aligned_cols=189  Identities=21%  Similarity=0.148  Sum_probs=128.7

Q ss_pred             CCCeEEe-ecccCCCCcEecCC-CCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCCCCeEEEEEccCCCC
Q 042831           47 DDNITYE-RAYPDSNRVIQLPA-NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSK  124 (645)
Q Consensus        47 ~~~~~~~-~a~~~~~~~~~Lt~-~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~GlaF~l~p~~~~  124 (645)
                      .++..+. +|.+ .++.|+||. .+++.|.+|.+.|++.        -+|+.+|+|.|.... ..+||||||.++.... 
T Consensus        21 i~~W~~~G~t~~-~~~~IrLTp~~~~~~G~iw~~~~~~~--------~~w~ie~~Fri~g~~-~~~gdG~a~W~t~~~~-   89 (225)
T cd06902          21 VPFWSHGGDAIA-SLEQVRLTPSLRSKKGSVWTKNPFSF--------ENWEVEVTFRVTGRG-RIGADGLAIWYTKERG-   89 (225)
T ss_pred             CCceEecccEEe-cCCEEEECCCCCCCEEEEeeCCCcCC--------CCEEEEEEEEEecCC-CCCCCEEEEEEECCCC-
Confidence            4577888 7877 678999999 6789999999999973        469999999998764 3468999999998752 


Q ss_pred             CCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCc-ccc---------eeeecccCC-CCcee
Q 042831          125 IPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVK-SKK---------NVSWWSDVK-SGRRN  193 (645)
Q Consensus       125 ~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~-s~~---------~~~~~~~~~-~g~~~  193 (645)
                          ..|+.+|-.+.-+       =+||.|||+.|....+.+.|-+-+|.-. ...         -..+..+.. ...+.
T Consensus        90 ----~~G~~~G~~~~f~-------Gl~I~~Dt~~n~~~~~~p~i~~~~NDGt~~yd~~~D~~~~~~~~C~~~~rn~~~p~  158 (225)
T cd06902          90 ----EEGPVFGSSDKWN-------GVGIFFDSFDNDGKKNNPAILVVGNDGTKSYDHQNDGLTQALGSCLRDFRNKPYPV  158 (225)
T ss_pred             ----CCCCccCCCCccc-------EEEEEEECCCCCCCCCCcEEEEEECCCCeeccccCCCcccccceEEEeccCCCCCe
Confidence                2455555433211       1899999998864444456655554321 111         112222333 35789


Q ss_pred             EEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCc-CCCCceEEEEeecccceeeeEEEEEeeccC
Q 042831          194 EAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQ-HLPEFVTFGFSMATGVDFAIFSIYSWEFNS  261 (645)
Q Consensus       194 ~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~-~l~~~~~vGfsastg~~~~~~~i~~wsf~~  261 (645)
                      +++|.|..  ..|+|.+......+....-++.  ++.. .||...|+||||+||...+.|.|++|.+.+
T Consensus       159 ~~rI~Y~~--~~l~V~~d~~~~~~~~~~~~Cf--~~~~v~LP~~~yfGiSA~Tg~l~d~hDIls~~~~s  223 (225)
T cd06902         159 RAKITYYQ--NVLTVSINNGFTPNKDDYELCT--RVENMVLPPNGYFGVSAATGGLADDHDVLSFLTFS  223 (225)
T ss_pred             EEEEEEEC--CeEEEEEeCCcCCCCCcccEEE--ecCCeeCCCCCEEEEEecCCCCCCcEeEEEEEEec
Confidence            99999997  5688888742221111111222  2222 357789999999999999999999998863

ERGIC-53 and ERGL, N-terminal carbohydrate recognition domain. ERGIC-53 and ERGL are eukaryotic mannose-binding type 1 transmembrane proteins of the early secretory pathway that transport newly synthesized glycoproteins from the endoplasmic reticulum (ER) to the ER-Golgi intermediate compartment (ERGIC). ERGIC-53 and ERGL have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. ERGIC-53 functions as a 'cargo receptor' to facilitate the export of glycoproteins with different characteristics from the ER, while the ERGIC-53-like protein (ERGL) which may act as a regulator of ERGIC-53. In mammals, ERGIC-53 forms a complex with MCFD2 (multi-coagulation factor deficiency 2) which then recruits blood coagulation factors V and VIII. Mutations in either MCFD2 or ERGIC-53 cause a mild form of inherite

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.50  E-value=2.4e-15  Score=168.79  Aligned_cols=261  Identities=23%  Similarity=0.286  Sum_probs=193.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcC-CCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRE-TNSYIAVKRVSQGS--KQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~~l  426 (645)
                      ...|...+.||+|.|+.|-...... ....+|+|.+....  .........|..+-..+. |+|++.+++.....+..++
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence            3456677889999999998887643 34567777765443  233344455777777776 9999999999999999999


Q ss_pred             EEEecCCCChhhhh-hhcCCCCCHHHHHHHHHHHHHHHHHHH-hhcCCCeeeccCCCCCeEECCCC-cEEEeeccCcccc
Q 042831          427 VYEFMPNGSLDSHL-FKENSLLTWEFRYKIAQDLASGLLYLQ-EEWEQCVVHRDIKSSNIMLDSNF-NAKIGDFGLARLV  503 (645)
Q Consensus       427 V~Ey~~~gsL~~~l-~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH~Dlkp~NILld~~~-~~kl~DfGla~~~  503 (645)
                      +.||..++++.+.+ .......+....-..+.|+..++.|+| .   .++.|+|+||+|.+++.++ ..+++|||+|..+
T Consensus        99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~  175 (601)
T KOG0590|consen   99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLATAY  175 (601)
T ss_pred             ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhccc
Confidence            99999999998888 433325566667788999999999999 6   8999999999999999999 9999999999877


Q ss_pred             cc--cCCcceeeccc-CccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccc
Q 042831          504 EH--AKGSQTTVLAG-TMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL  579 (645)
Q Consensus       504 ~~--~~~~~~~~~~g-t~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~  579 (645)
                      ..  +.........| ++.|+|||...+. -..+..|+||.|+++.-+++|..|++....... ....|...   .+...
T Consensus       176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~-~~~~~~~~---~~~~~  251 (601)
T KOG0590|consen  176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG-RYSSWKSN---KGRFT  251 (601)
T ss_pred             cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc-cceeeccc---ccccc
Confidence            65  33334455678 9999999988774 457789999999999999999999875544321 11111110   00000


Q ss_pred             cccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       580 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..    .-.    .-....+.+..+++..+|..|.+.+++...-|..
T Consensus       252 ~~----~~~----~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~  290 (601)
T KOG0590|consen  252 QL----PWN----SISDQAHDLLHKILKENPSNRLSIEELKLDNWLS  290 (601)
T ss_pred             cC----ccc----cCChhhhhcccccccCCchhcccccccccccccc
Confidence            00    001    1123455666778889999999999988776643

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.49  E-value=4.3e-14  Score=140.34  Aligned_cols=203  Identities=24%  Similarity=0.358  Sum_probs=142.6

Q ss_pred             HHHHHhcCCCCccEEEeeeeeCC-----eEEEEEEecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcC
Q 042831          400 VKIISRLRHRNLVQLLGWCHEKK-----ELLLVYEFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWE  471 (645)
Q Consensus       400 i~~l~~l~H~nlv~l~~~~~~~~-----~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~  471 (645)
                      ..-|-++-|.|||+++.|+.+.+     ...++.|||..|+|..+|++   ....+......+++.||..||.|||+ |.
T Consensus       118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~  196 (458)
T KOG1266|consen  118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CD  196 (458)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cC
Confidence            34455667999999999886543     57899999999999999975   34578888889999999999999998 77


Q ss_pred             CCeeeccCCCCCeEECCCCcEEEeeccCcc---cccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHH
Q 042831          472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLAR---LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA  548 (645)
Q Consensus       472 ~~ivH~Dlkp~NILld~~~~~kl~DfGla~---~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ell  548 (645)
                      +.|+|+++..+.|++..++-+|++----..   ..............+.++|.+||+=..-..+.++|||+||+..+||.
T Consensus       197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema  276 (458)
T KOG1266|consen  197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA  276 (458)
T ss_pred             CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence            999999999999999999999986321110   00011111222334678999999877777888999999999999998


Q ss_pred             cCCCCCCCCCCCCc-hhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHh
Q 042831          549 CGRKPINPKAPQGQ-VSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL  623 (645)
Q Consensus       549 tG~~pf~~~~~~~~-~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  623 (645)
                      -|..--........ ..-+.         .....+...+..           .++..|++.+|..||+|++++.|+
T Consensus       277 ilEiq~tnseS~~~~ee~ia---------~~i~~len~lqr-----------~~i~kcl~~eP~~rp~ar~llfHp  332 (458)
T KOG1266|consen  277 ILEIQSTNSESKVEVEENIA---------NVIIGLENGLQR-----------GSITKCLEGEPNGRPDARLLLFHP  332 (458)
T ss_pred             HheeccCCCcceeehhhhhh---------hheeeccCcccc-----------CcCcccccCCCCCCcchhhhhcCc
Confidence            87754221111000 00000         001111111111           245679999999999999999876

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.40  E-value=1.5e-12  Score=141.86  Aligned_cols=144  Identities=20%  Similarity=0.214  Sum_probs=100.7

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhH---------------------------------------
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI---------------------------------------  393 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~---------------------------------------  393 (645)
                      .|+ .+.||.|++|.||+|++. +|+.||||+.+....+..                                       
T Consensus       119 ~fd-~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  196 (437)
T TIGR01982       119 EFE-EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR  196 (437)
T ss_pred             hCC-CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence            344 478999999999999986 488999999865421110                                       


Q ss_pred             -HHHHHHHHHHHhcC----CCCccEEEeee-eeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHH-HHHHH
Q 042831          394 -KEYASEVKIISRLR----HRNLVQLLGWC-HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS-GLLYL  466 (645)
Q Consensus       394 -~~~~~Ei~~l~~l~----H~nlv~l~~~~-~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~-gL~yL  466 (645)
                       -+|.+|+..+.+++    |.+-+.+-..+ ...+..+|||||++|++|.+.........   .+.+++..++. .+..+
T Consensus       197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql  273 (437)
T TIGR01982       197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQV  273 (437)
T ss_pred             HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHH
Confidence             12455666665553    32222222222 22345799999999999988764322222   24456666666 36677


Q ss_pred             HhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          467 QEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       467 H~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      |.   .+++|+|++|.||+++.++.+++.|||++..+.
T Consensus       274 ~~---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       274 LR---DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             Hh---CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            76   899999999999999999999999999997664

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.37  E-value=6.4e-13  Score=142.97  Aligned_cols=249  Identities=24%  Similarity=0.278  Sum_probs=184.5

Q ss_pred             CCCCCCccCc--CCcEEEEEEEE--cCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeEE
Q 042831          353 DFNDDQKLGQ--GGFGGVYKGFF--RETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       353 ~f~~~~~LG~--G~fG~Vy~g~~--~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~~  425 (645)
                      .|...+.+|.  |.+|.||.+..  ..++..+|+|+-+..  .......=.+|+....+++ |+|.++....+..++..+
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf  194 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF  194 (524)
T ss_pred             hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence            4566778999  99999999999  888899999974432  2222233345666666664 999999888899999999


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHH----HHHHHHhhcCCCeeeccCCCCCeEECCC-CcEEEeeccCc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS----GLLYLQEEWEQCVVHRDIKSSNIMLDSN-FNAKIGDFGLA  500 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~ivH~Dlkp~NILld~~-~~~kl~DfGla  500 (645)
                      +-.|++ +.+|..+.+.....++....+.+..+..+    ||.++|.   .+++|-|+||.||++..+ ..++++|||+.
T Consensus       195 iqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~df~~v  270 (524)
T KOG0601|consen  195 IQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTDFGLV  270 (524)
T ss_pred             eeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCCccee
Confidence            999998 57888888777777888888888888888    9999998   999999999999999998 89999999998


Q ss_pred             ccccccCCcc----eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC
Q 042831          501 RLVEHAKGSQ----TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG  576 (645)
Q Consensus       501 ~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~  576 (645)
                      ..+.......    .....|...|++||.. ++-++..+|+|++|.+.+|..+|..+.......      .  |...+++
T Consensus       271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~------~--W~~~r~~  341 (524)
T KOG0601|consen  271 SKISDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKNS------S--WSQLRQG  341 (524)
T ss_pred             EEccCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCCC------C--ccccccc
Confidence            8765443211    1223678889999965 446789999999999999999988776533111      1  2222222


Q ss_pred             ccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 042831          577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHV  622 (645)
Q Consensus       577 ~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  622 (645)
                      .    +..+++....    ..+..+...+++.+|..|++.+.+..+
T Consensus       342 ~----ip~e~~~~~s----~~l~~~~~~~~d~~~~~~~~~q~~~~l  379 (524)
T KOG0601|consen  342 Y----IPLEFCEGGS----SSLRSVTSQMLDEDPRLRLTAQILTAL  379 (524)
T ss_pred             c----CchhhhcCcc----hhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence            2    1222222222    122236677899999999998877654

>PF03388 Lectin_leg-like: Legume-like lectin family; InterPro: IPR005052 Lectins are structurally diverse proteins that bind to specific carbohydrates

Probab=99.26  E-value=4e-10  Score=111.91  Aligned_cols=183  Identities=22%  Similarity=0.266  Sum_probs=115.6

Q ss_pred             CCeEEe-ecccCCCCcEecCC-CCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCCCCeEEEEEccCCCCC
Q 042831           48 DNITYE-RAYPDSNRVIQLPA-NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKI  125 (645)
Q Consensus        48 ~~~~~~-~a~~~~~~~~~Lt~-~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~GlaF~l~p~~~~~  125 (645)
                      ++..+. ++.+ .++.|+||. .+++.|.+|.+.|++.        .+|+.+|+|.|........||||||.++..... 
T Consensus        22 ~~W~~~G~t~i-~~~~IrLTp~~~~~~G~iws~~~~~~--------~~w~i~~~Fri~g~~~~~~g~G~a~W~t~~~~~-   91 (229)
T PF03388_consen   22 PNWDIGGSTVI-TDNFIRLTPDRQSQSGSIWSRKPIPF--------DNWEIEFTFRISGQEKGLGGDGMAFWYTKDPGS-   91 (229)
T ss_dssp             TTEEEEET-EE-ESSEEEEE-SSTTEEEEEEESS-BEE--------SEEEEEEEEEEESS-SSS-S-EEEEEEESSSSS-
T ss_pred             CCEEECCeEEe-cCCEEEECCCcccCEEEEEEcCCCCc--------cCEEEEEEEEEeccccCcCCCeEEEEEEcCccc-
Confidence            367777 7777 588999999 6789999999999987        479999999999875566899999999976532 


Q ss_pred             CCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCC---CCCceeeecCCCc-c---------cceeeecccCC-CCc
Q 042831          126 PTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDP---TFSHVGIDINSVK-S---------KKNVSWWSDVK-SGR  191 (645)
Q Consensus       126 ~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~---~~~hvgidvns~~-s---------~~~~~~~~~~~-~g~  191 (645)
                          .|..+|--+.- .|      +||=||||.|...+   ....|.+-+|.-. +         ..-..+..++. .+.
T Consensus        92 ----~G~~fG~~~~f-~G------l~i~idt~~N~~~~~~~~~p~i~~~~NDGt~~~~~~~dg~~~~~~~C~~~~rn~~~  160 (229)
T PF03388_consen   92 ----DGPVFGGPDKF-DG------LGIFIDTYDNDEGGHKRGFPYISAMLNDGTKSYDHDNDGKDQSLGSCSADYRNSDV  160 (229)
T ss_dssp             ----SCSBTTB-SS--EE------EEEEEEES-TTCTTCTSTSSEEEEEEEESSS---GGGTTTTT-SEEEE---BTESS
T ss_pred             ----cccccCCCccc-ce------EEEEEEcccCCCcccccccceEEEEecCCCccccccccCcccccccceeccCcCCC
Confidence                55556643221 11      89999999986433   3345555554321 1         01112223333 356


Q ss_pred             eeEEEEEEcCCCceEEEEEecC--CCcccccceeeEeeccCcCCCCceEEEEeecccceeeeEEEEE
Q 042831          192 RNEAWISYNSSTHNLSVAFTGF--RNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYS  256 (645)
Q Consensus       192 ~~~~~I~Y~~~~~~l~v~l~~~--~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~  256 (645)
                      ..+++|.|..  +.+.|.+...  .....-..++.  ++ .-.||+..|+||||+||...+.|.|++
T Consensus       161 p~~~ri~Y~~--~~l~v~id~~~~~~~~~~~~Cf~--~~-~v~LP~~~yfGvSA~Tg~~~d~hdi~s  222 (229)
T PF03388_consen  161 PTRIRISYSK--NTLTVSIDSNYLKNQDDWELCFT--TD-GVDLPEGYYFGVSAATGELSDNHDILS  222 (229)
T ss_dssp             EEEEEEEEET--TEEEEEEETSCCSECCTTEEEEE--ES-TEEGGSSBEEEEEEEESSSGGEEEEEE
T ss_pred             CEEEEEEEEC--CeEEEEEecccccCCcCCcEEEE--cC-CeecCCCCEEEEEecCCCCCCcEEEEE
Confidence            7899999996  4677777632  11111122332  22 113577889999999999999999975

This family includes the VIP36 and ERGIC-53 lectins. These two proteins were the first members of the family of animal lectins similar to the leguminous plant lectins []. The alignment for this family is towards the N terminus, where the similarity of VIP36 and ERGIC-53 is greatest. Although they have been identified as a family of animal lectins, this alignment also includes yeast sequences[]. ERGIC-53 is a 53kDa protein, localised to the intermediate region between the endoplasmic reticulum and the Golgi apparatus (ER-Golgi-Intermediate Compartment, ERGIC). It was identified as a calcium-dependent, mannose-specific lectin []. Its dysfunction has been associated with combined factors V and VIII deficiency, suggesting an important and substrate-specific role for ERGIC-53 in the glycoprotein-secreting pathway [,]. The L-type lectin-like domain has an overall globular shape composed of a beta-sandwich of two major twisted antiparallel beta-sheets. The beta-sandwich comprises a major concave beta-sheet and a minor convex beta-sheet, in a variation of the jelly roll fold [, , , ]. ; GO: 0016020 membrane; PDB: 3A4U_A 3LCP_B 2A6Z_A 2A71_C 2A70_B 2A6Y_A 2A6X_A 2A6W_B 2A6V_B 2E6V_B ....

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.26  E-value=2.8e-11  Score=114.70  Aligned_cols=130  Identities=17%  Similarity=0.103  Sum_probs=96.0

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCcc-EEEeeeeeCCeEEEEEEecCCCC
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLV-QLLGWCHEKKELLLVYEFMPNGS  435 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv-~l~~~~~~~~~~~lV~Ey~~~gs  435 (645)
                      .+.|+.|.++.||++...  +..+++|....... ....+..|+.++..+.+.+++ +++.+.  ....++||||+++.+
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~   77 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSE   77 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCc
Confidence            457899999999999875  67899998754432 223567899999988765554 444443  234579999999988


Q ss_pred             hhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhc--CCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          436 LDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW--EQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       436 L~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      +....         .....+..+++++|+.||...  ..+++|+|++|.||+++ ++.+++.|||.+.
T Consensus        78 l~~~~---------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          78 LLTED---------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             ccccc---------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence            76431         112345678999999999832  12369999999999999 6689999999885

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.24  E-value=1.5e-11  Score=135.65  Aligned_cols=149  Identities=15%  Similarity=0.159  Sum_probs=95.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhh----------------------------------HH--
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQG----------------------------------IK--  394 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~----------------------------------~~--  394 (645)
                      ...|+. +.||+|++|.||+|+++++|+.||||+.+....+.                                  .+  
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l  197 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL  197 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence            345776 78999999999999999889999999987542110                                  11  


Q ss_pred             ----HHHHHHHHHHhcC----CCCccEEEeeee-eCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHH
Q 042831          395 ----EYASEVKIISRLR----HRNLVQLLGWCH-EKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY  465 (645)
Q Consensus       395 ----~~~~Ei~~l~~l~----H~nlv~l~~~~~-~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~y  465 (645)
                          +|.+|+..+.+++    +.+.+.+=..+. -.+..+|||||++|+.+.+.-.-.....+   +..++...+.  .|
T Consensus       198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d---~~~la~~~v~--~~  272 (537)
T PRK04750        198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTD---MKLLAERGVE--VF  272 (537)
T ss_pred             HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCC---HHHHHHHHHH--HH
Confidence                2344555554443    333333222222 24567899999999999764221111111   1122222222  12


Q ss_pred             HHhhcCCCeeeccCCCCCeEECCCC----cEEEeeccCcccccc
Q 042831          466 LQEEWEQCVVHRDIKSSNIMLDSNF----NAKIGDFGLARLVEH  505 (645)
Q Consensus       466 LH~~~~~~ivH~Dlkp~NILld~~~----~~kl~DfGla~~~~~  505 (645)
                      +++....|++|+|++|.||+++.++    .+++.|||++..++.
T Consensus       273 ~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        273 FTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             HHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            2222338999999999999999888    999999999876643

>cd06903 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain

Probab=99.22  E-value=1e-09  Score=107.17  Aligned_cols=178  Identities=19%  Similarity=0.162  Sum_probs=117.4

Q ss_pred             CCCeEEe-ecccCCCCcEecCCCCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCCCCeEEEEEccCCCCC
Q 042831           47 DDNITYE-RAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKI  125 (645)
Q Consensus        47 ~~~~~~~-~a~~~~~~~~~Lt~~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~GlaF~l~p~~~~~  125 (645)
                      ..+..+. +|.+ .++.|+||..+++.|.+|-+.|+++-+       +|+.+|+|.|.... ..+||||||.++..... 
T Consensus        20 i~~W~~~G~t~v-~~~~IrLTp~~s~~G~iWs~~pl~~~~-------~w~ie~~Fri~G~~-~~~gdGla~W~t~~~~~-   89 (215)
T cd06903          20 IPNWQTSGNPKL-ESGRIILTPPGNQRGSLWLKKPLSLKD-------EWTIEWTFRSTGPE-GRSGGGLNFWLVKDGNA-   89 (215)
T ss_pred             CCCeEEcCcEEe-eCCeEEECCCCCceEeEeeCCcCCCCC-------CEEEEEEEEecccC-CcCCCEEEEEEECCCcc-
Confidence            4467788 8888 577899998766899999999998732       69999999998754 26799999999986532 


Q ss_pred             CCCCCC-CcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCc-cc--------ceeeeccc-CCCCceeE
Q 042831          126 PTNKGG-GSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVK-SK--------KNVSWWSD-VKSGRRNE  194 (645)
Q Consensus       126 ~~~~~g-~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~-s~--------~~~~~~~~-~~~g~~~~  194 (645)
                         ..| ..+|-.+.- .|      +||.|||+.|..    ..|-+-+|.-. ..        .-..+... ...+.+.+
T Consensus        90 ---~~g~~~fG~~~~f-~G------l~I~~Dt~~n~~----p~i~~~~NDGt~~yd~~~d~~~~~g~C~~~~rn~~~p~~  155 (215)
T cd06903          90 ---DVGTSSIYGPSKF-DG------LQLLIDNNGGSG----GSLRGFLNDGSKDYKNEDVDSLAFGSCLFAYQDSGVPST  155 (215)
T ss_pred             ---cCCccccCCCCCC-cE------EEEEEECCCCCC----ceEEEEECCCCeeccccCCcccccceeeEeccCCCCCEE
Confidence               112 233321111 11      899999998731    23333333211 11        11122222 24567899


Q ss_pred             EEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCC-CceEEEEeecccceeeeEEEEEee
Q 042831          195 AWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLP-EFVTFGFSMATGVDFAIFSIYSWE  258 (645)
Q Consensus       195 ~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~-~~~~vGfsastg~~~~~~~i~~ws  258 (645)
                      ++|.|....+.|+|.+...         ++..++- -.|| ...++||||+||...+.|.|++-.
T Consensus       156 iri~Y~~~~~~l~v~vd~~---------~Cf~~~~-v~lP~~~y~fGiSAaTg~~~d~hdIl~~~  210 (215)
T cd06903         156 IRLSYDALNSLFKVQVDNR---------LCFQTDK-VQLPQGGYRFGITAANADNPESFEILKLK  210 (215)
T ss_pred             EEEEEECCCCEEEEEECCC---------EEEecCC-eecCCCCCEEEEEEcCCCCCCcEEEEEEE
Confidence            9999998778999988531         2222221 1234 557899999999988899987543

EMP46 and EMP47, N-terminal carbohydrate recognition domain. EMP46 and EMP47 are fungal type-I transmembrane proteins that cycle between the endoplasmic reticulum and the golgi apparatus and are thought to function as cargo receptors that transport newly synthesized glycoproteins. EMP47 is a receptor for EMP46 responsible for the selective transport of EMP46 by forming hetero-oligomerization between the two proteins. EMP46 and EMP47 have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. EMP46 and EMP47 are 45% sequence-identical to one another and have sequence homology to a class of intracellular lectins defined by ERGIC-53 and VIP36. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat s

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.21  E-value=1.2e-10  Score=126.56  Aligned_cols=170  Identities=19%  Similarity=0.212  Sum_probs=129.4

Q ss_pred             EEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCH
Q 042831          370 KGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTW  449 (645)
Q Consensus       370 ~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~  449 (645)
                      .|..+.++.+|.|+..+..+........+-++.|+.+|||||+++++....++.+|||.|-+.  -|..++.+    +..
T Consensus        30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~----l~~  103 (690)
T KOG1243|consen   30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE----LGK  103 (690)
T ss_pred             ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH----hHH
Confidence            466777788999998877666445566778899999999999999999999999999999873  34455533    235


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeecccCccccCccccccC
Q 042831          450 EFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG  529 (645)
Q Consensus       450 ~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  529 (645)
                      ....-.+.||+.||.|||+  ..+++|++|.-..|++++.|..||++|.++........ ......---.|..|+.+...
T Consensus       104 ~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s  180 (690)
T KOG1243|consen  104 EEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPS  180 (690)
T ss_pred             HHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCcc
Confidence            5667788999999999997  37899999999999999999999999998764432221 11111222346666644332


Q ss_pred             CCCcchhHHHHHHHHHHHHcC
Q 042831          530 KASKESDVYSFGIVALEIACG  550 (645)
Q Consensus       530 ~~t~~sDV~SfGvll~elltG  550 (645)
                      .  -..|.|.|||+++|++.|
T Consensus       181 ~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  181 E--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             c--cchhhhhHHHHHHHHhCc
Confidence            2  346999999999999999

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.16  E-value=5e-10  Score=107.88  Aligned_cols=139  Identities=17%  Similarity=0.100  Sum_probs=99.9

Q ss_pred             CccCcCCcEEEEEEEEcC------CCeEEEEEEeccCC----------------------hhhHHHHH----HHHHHHHh
Q 042831          358 QKLGQGGFGGVYKGFFRE------TNSYIAVKRVSQGS----------------------KQGIKEYA----SEVKIISR  405 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~------~~~~vavK~~~~~~----------------------~~~~~~~~----~Ei~~l~~  405 (645)
                      ..||.|--+.||.|...+      .+..+|||..+...                      ....+.+.    +|+..|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            568999999999998653      24789999764210                      00112223    79999999


Q ss_pred             cCC--CCccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHH-HhhcCCCeeeccCCCC
Q 042831          406 LRH--RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYL-QEEWEQCVVHRDIKSS  482 (645)
Q Consensus       406 l~H--~nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~Dlkp~  482 (645)
                      ++.  -++.+.+++    ..-+|||||+.+..+.....+ ...++..+...+..+++.+|..| |.   .+++|+||++.
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk-d~~~~~~~~~~i~~~i~~~l~~l~H~---~glVHGDLs~~  154 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK-DAKLNDEEMKNAYYQVLSMMKQLYKE---CNLVHADLSEY  154 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh-ccccCHHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHH
Confidence            864  466666664    456899999976544322211 12345556678889999999999 66   89999999999


Q ss_pred             CeEECCCCcEEEeeccCcccccc
Q 042831          483 NIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       483 NILld~~~~~kl~DfGla~~~~~  505 (645)
                      |||++ ++.+.|+|||.+...++
T Consensus       155 NIL~~-~~~v~iIDF~qav~~~h  176 (197)
T cd05146         155 NMLWH-DGKVWFIDVSQSVEPTH  176 (197)
T ss_pred             HEEEE-CCcEEEEECCCceeCCC
Confidence            99997 46799999999876554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.14  E-value=3.5e-11  Score=129.67  Aligned_cols=257  Identities=22%  Similarity=0.240  Sum_probs=177.4

Q ss_pred             cChHH-HHHhhcCCCCCCccCcCCcEEEEEEEEc-CCCeEEEEEEeccCChhhH--HHHHHHHHHHHhc-CCCCccEEEe
Q 042831          342 FPYKE-LALATNDFNDDQKLGQGGFGGVYKGFFR-ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRL-RHRNLVQLLG  416 (645)
Q Consensus       342 ~~~~e-l~~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~~vavK~~~~~~~~~~--~~~~~Ei~~l~~l-~H~nlv~l~~  416 (645)
                      |.-.+ ......+|.....||.|.|+.|++...+ .++..+++|.+........  ..-..|+.+...+ .|.+++.+..
T Consensus       254 ~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~  333 (524)
T KOG0601|consen  254 FTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNS  333 (524)
T ss_pred             ecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCC
Confidence            33334 4455678999999999999999998866 6778899998765432222  2223456555555 4788887766


Q ss_pred             eeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC-CcEEEe
Q 042831          417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN-FNAKIG  495 (645)
Q Consensus       417 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~-~~~kl~  495 (645)
                      .+..-.+.++=-|||+++++.... .-...++...++++..|++.++.++|+   ..++|+|+||+||++..+ +..+++
T Consensus       334 ~W~~~r~~~ip~e~~~~~s~~l~~-~~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~  409 (524)
T KOG0601|consen  334 SWSQLRQGYIPLEFCEGGSSSLRS-VTSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLG  409 (524)
T ss_pred             CccccccccCchhhhcCcchhhhh-HHHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhcc
Confidence            665556667889999999987666 233457778889999999999999998   999999999999999876 888999


Q ss_pred             eccCcccccccCCcceeecccCcccc--CccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHh
Q 042831          496 DFGLARLVEHAKGSQTTVLAGTMGYM--APECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY  573 (645)
Q Consensus       496 DfGla~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~  573 (645)
                      |||.+..+..   .. ....+..++.  +++......+..+.|++|||.-+.|.++|..--+...        +|  ..+
T Consensus       410 ~~~~~t~~~~---~~-~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~--------~~--~~i  475 (524)
T KOG0601|consen  410 DFGCWTRLAF---SS-GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV--------QS--LTI  475 (524)
T ss_pred             ccccccccce---ec-ccccccccccccchhhccccccccccccccccccccccccCcccCcccc--------cc--eee
Confidence            9999864211   11 1122333344  5555566778999999999999999998875433211        11  011


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      +.|..     +.+...    - +.+..+......+++..||.+.+...+..++
T Consensus       476 ~~~~~-----p~~~~~----~-~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  476 RSGDT-----PNLPGL----K-LQLQVLLKVMINPDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             ecccc-----cCCCch----H-HhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence            11111     111111    1 3334445567899999999999988877765

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.11  E-value=7.9e-10  Score=109.33  Aligned_cols=143  Identities=21%  Similarity=0.258  Sum_probs=111.7

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCC--CccEEEeeeeeC---CeEEEEEEe
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-QGIKEYASEVKIISRLRHR--NLVQLLGWCHEK---KELLLVYEF  430 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~--nlv~l~~~~~~~---~~~~lV~Ey  430 (645)
                      .+.|+.|..+.||++...+ |+.+++|....... ....++..|++++..+++.  ++.+++.++...   +..++||||
T Consensus         3 ~~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~   81 (223)
T cd05154           3 VRQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER   81 (223)
T ss_pred             ceecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence            3578999999999998854 57899998754322 2456788999999999763  467788877654   356899999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhc----------------------------------------
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW----------------------------------------  470 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------------  470 (645)
                      +++.++...+..  ..++..++..++.++++.|..||+..                                        
T Consensus        82 i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (223)
T cd05154          82 VDGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER  159 (223)
T ss_pred             eCCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence            999988776532  35677888888999999999998520                                        


Q ss_pred             -------------CCCeeeccCCCCCeEECC--CCcEEEeeccCccc
Q 042831          471 -------------EQCVVHRDIKSSNIMLDS--NFNAKIGDFGLARL  502 (645)
Q Consensus       471 -------------~~~ivH~Dlkp~NILld~--~~~~kl~DfGla~~  502 (645)
                                   ...++|+|+.+.||+++.  ++.+.|.||+.+..
T Consensus       160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                         256899999999999998  66789999998753

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.07  E-value=2.6e-09  Score=112.85  Aligned_cols=167  Identities=19%  Similarity=0.298  Sum_probs=131.3

Q ss_pred             cEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeee----eCCeEEEEEEecCC-CChhhh
Q 042831          365 FGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCH----EKKELLLVYEFMPN-GSLDSH  439 (645)
Q Consensus       365 fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~----~~~~~~lV~Ey~~~-gsL~~~  439 (645)
                      -.+.||+....+|..+++|++..+..+.......-++.++++.|.|+|++.+.+.    .+..+++||+|+|+ ++|.++
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~  368 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL  368 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence            3678999999999999999995443333333345688999999999999999876    34578999999985 577665


Q ss_pred             hhh--------------cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          440 LFK--------------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       440 l~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      .+.              .+...+++..|.++.|++.||.++|+   .|+.-+-|.+++|+++.+.+++|+.+|.......
T Consensus       369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~  445 (655)
T KOG3741|consen  369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE  445 (655)
T ss_pred             HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence            432              23457889999999999999999999   8999999999999999999999999988766543


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCC
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRK  552 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~  552 (645)
                      ...               |-+.   --.+-|.=.||.+++.|.||..
T Consensus       446 d~~---------------~~le---~~Qq~D~~~lG~ll~aLAt~~~  474 (655)
T KOG3741|consen  446 DPT---------------EPLE---SQQQNDLRDLGLLLLALATGTE  474 (655)
T ss_pred             CCC---------------cchh---HHhhhhHHHHHHHHHHHhhccc
Confidence            321               1111   1235689999999999999964

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.93  E-value=1e-08  Score=95.24  Aligned_cols=142  Identities=19%  Similarity=0.215  Sum_probs=104.6

Q ss_pred             CCCccCcCCcEEEEEEEEcCCCeEEEEEEe-ccC-------ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          356 DDQKLGQGGFGGVYKGFFRETNSYIAVKRV-SQG-------SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       356 ~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~-~~~-------~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ....+-+|+-+.|+++.+.  |+.+.||.- .+.       .+-..+.-.+|++.+.+++--.|..-.-++.+...-.|+
T Consensus        11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~   88 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY   88 (229)
T ss_pred             cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence            4678999999999999886  677777742 221       122345677899999998755554444455566667899


Q ss_pred             EEecCC-CChhhhhhhcCCCCCH-HHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC---cEEEeeccCccc
Q 042831          428 YEFMPN-GSLDSHLFKENSLLTW-EFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF---NAKIGDFGLARL  502 (645)
Q Consensus       428 ~Ey~~~-gsL~~~l~~~~~~l~~-~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~---~~kl~DfGla~~  502 (645)
                      |||+++ .++.+++......-.. +....+++.|-+.+.-||.   .+++|+||..+||+|..++   .+.+.|||++..
T Consensus        89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecchhc
Confidence            999976 4778888654333233 3337888999999999998   8999999999999996444   458999999854

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.93  E-value=1.1e-08  Score=95.50  Aligned_cols=131  Identities=21%  Similarity=0.269  Sum_probs=99.1

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEe-ccC--C-----hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRV-SQG--S-----KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~-~~~--~-----~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ..+++|+-..+|.+.+.  |..+++|.- ++.  .     +-....-.+|+.++.+++--.|.--.=+..+.....|+||
T Consensus         2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me   79 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME   79 (204)
T ss_pred             chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence            35789999999999775  445667642 221  1     1123445689999999876555555555667777899999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      |.++-.|.+.+...        +..++..+-.-+.-||.   .+|+|+||.++||++.... +.++||||+..
T Consensus        80 ~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          80 YIEGELLKDALEEA--------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             EeCChhHHHHHHhc--------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            99999998888543        34667777777889998   9999999999999998764 99999999964

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.88  E-value=6.7e-10  Score=125.79  Aligned_cols=260  Identities=18%  Similarity=0.190  Sum_probs=170.4

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      ...+++.+.+-+.+|.++.++...-..+|...+.|......   +...+....+-.++-.-+||-++...--+.......
T Consensus       801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~  880 (1205)
T KOG0606|consen  801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP  880 (1205)
T ss_pred             CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence            45577888888999999999988877666555555432221   112222233333333334555555444445567889


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc-
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-  504 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~-  504 (645)
                      ||++|..+++|...|+.... .+.+.....+..+..+++|||.   ..+.|+|++|.|++...++..+++|||...... 
T Consensus       881 L~~~~~~~~~~~Skl~~~~~-~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~  956 (1205)
T KOG0606|consen  881 LVGHYLNGGDLPSKLHNSGC-LSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL  956 (1205)
T ss_pred             hhhHHhccCCchhhhhcCCC-cccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCcccccccccc
Confidence            99999999999998876553 3333334445557788999998   668999999999999999999999998433211 


Q ss_pred             ------c--------------cCC---------cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCC
Q 042831          505 ------H--------------AKG---------SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPIN  555 (645)
Q Consensus       505 ------~--------------~~~---------~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~  555 (645)
                            .              ...         .......+|+.|++||...+......+|.|+.|++++|.++|..||.
T Consensus       957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen  957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred             ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence                  0              000         01123568999999999999999999999999999999999999998


Q ss_pred             CCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHhccC
Q 042831          556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIR---QVIHVLNFE  626 (645)
Q Consensus       556 ~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~---evl~~L~~~  626 (645)
                      ...++...       +-+.++.+     +.  .....+.......++...+..+|.+|-.|.   ++-.+--+.
T Consensus      1037 a~tpq~~f-------~ni~~~~~-----~~--p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~ 1096 (1205)
T KOG0606|consen 1037 AETPQQIF-------ENILNRDI-----PW--PEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQ 1096 (1205)
T ss_pred             Ccchhhhh-------hccccCCC-----CC--CCCccccChhhhhhhhhhhccCchhccCcccccccccCCccC
Confidence            66543221       10111111     10  011112223344455667788999998777   555554443

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.76  E-value=2.3e-07  Score=94.36  Aligned_cols=139  Identities=12%  Similarity=0.052  Sum_probs=99.3

Q ss_pred             ccCcCCcEEEEEEEEcCCCeEEEEEEeccCChh-hHH----------HHHHHHHHHHhcCCCC--ccEEEeeeee-----
Q 042831          359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ-GIK----------EYASEVKIISRLRHRN--LVQLLGWCHE-----  420 (645)
Q Consensus       359 ~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~-~~~----------~~~~Ei~~l~~l~H~n--lv~l~~~~~~-----  420 (645)
                      .+-.-....|++....  |+.+.||+....... ..+          .+.+|...+.++...+  .++.+++...     
T Consensus        29 ~v~~~~~rrvvr~~~~--g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~  106 (268)
T PRK15123         29 VFRELEGRRTLRFELA--GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA  106 (268)
T ss_pred             EEecCCCceEEEEEEC--CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence            3443444557776653  678999977433211 111          3778999888885433  3344555433     


Q ss_pred             CCeEEEEEEecCCC-Chhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC-------CCc
Q 042831          421 KKELLLVYEFMPNG-SLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-------NFN  491 (645)
Q Consensus       421 ~~~~~lV~Ey~~~g-sL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~-------~~~  491 (645)
                      ...-+||+|++++. +|.+++... ....+...+..++.+++..+.-||.   .||+|+|++++|||++.       +..
T Consensus       107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~~~~~~~~~~  183 (268)
T PRK15123        107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLPFPGREEDLK  183 (268)
T ss_pred             cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEeccccCCCCCce
Confidence            23578999999886 788887431 2345667788999999999999999   99999999999999975       568


Q ss_pred             EEEeeccCccc
Q 042831          492 AKIGDFGLARL  502 (645)
Q Consensus       492 ~kl~DfGla~~  502 (645)
                      +.++||+.++.
T Consensus       184 ~~LIDl~r~~~  194 (268)
T PRK15123        184 LSVIDLHRAQI  194 (268)
T ss_pred             EEEEECCcccc
Confidence            99999998853

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.66  E-value=2.6e-07  Score=88.75  Aligned_cols=126  Identities=21%  Similarity=0.268  Sum_probs=80.8

Q ss_pred             EEEEEEEcCCCeEEEEEEeccCC--------------h------------hhHHHHHHHHHHHHhcCCC--CccEEEeee
Q 042831          367 GVYKGFFRETNSYIAVKRVSQGS--------------K------------QGIKEYASEVKIISRLRHR--NLVQLLGWC  418 (645)
Q Consensus       367 ~Vy~g~~~~~~~~vavK~~~~~~--------------~------------~~~~~~~~Ei~~l~~l~H~--nlv~l~~~~  418 (645)
                      .||.|...+ |..+|||..+...              +            .......+|.+.|.++..-  ++.+.+++-
T Consensus         1 ~Vy~~~~~~-~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~   79 (188)
T PF01163_consen    1 DVYHAIDPD-GEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN   79 (188)
T ss_dssp             EEEEEEECT-TEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred             CEEEEECCC-CCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence            389998854 7899999864310              0            0123466899999999865  466666542


Q ss_pred             eeCCeEEEEEEecC--CCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHH-HhhcCCCeeeccCCCCCeEECCCCcEEEe
Q 042831          419 HEKKELLLVYEFMP--NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYL-QEEWEQCVVHRDIKSSNIMLDSNFNAKIG  495 (645)
Q Consensus       419 ~~~~~~~lV~Ey~~--~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~Dlkp~NILld~~~~~kl~  495 (645)
                          .-+|||||++  +..+.. +....  ++......++.+++..+..+ |.   .+++|+||.+.||+++++ .+.|+
T Consensus        80 ----~~~ivME~I~~~G~~~~~-l~~~~--~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~~~iI  148 (188)
T PF01163_consen   80 ----RNVIVMEYIGEDGVPLPR-LKDVD--LSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-KVYII  148 (188)
T ss_dssp             ----TTEEEEE--EETTEEGGC-HHHCG--GGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-CEEE-
T ss_pred             ----CCEEEEEecCCCccchhh-HHhcc--ccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-eEEEE
Confidence                3379999998  444433 32211  11334566777888766664 55   899999999999999988 99999


Q ss_pred             eccCccccc
Q 042831          496 DFGLARLVE  504 (645)
Q Consensus       496 DfGla~~~~  504 (645)
                      |||.+....
T Consensus       149 Df~qav~~~  157 (188)
T PF01163_consen  149 DFGQAVDSS  157 (188)
T ss_dssp             -GTTEEETT
T ss_pred             ecCcceecC
Confidence            999886543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3838 consensus Mannose lectin ERGIC-53, involved in glycoprotein traffic [Intracellular trafficking, secretion, and vesicular transport]

Probab=98.54  E-value=6.9e-06  Score=83.49  Aligned_cols=184  Identities=20%  Similarity=0.183  Sum_probs=120.3

Q ss_pred             eEEe-ecccCCCCcEecCC-CCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCCCCeEEEEEccCCCCCCC
Q 042831           50 ITYE-RAYPDSNRVIQLPA-NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPT  127 (645)
Q Consensus        50 ~~~~-~a~~~~~~~~~Lt~-~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~GlaF~l~p~~~~~~~  127 (645)
                      .... ||.. +.-.|+|+. -.++.|-+|-+.-+.+        ..|...-.|.|+... ..++|||||.-+...     
T Consensus        56 W~~~GdAIa-s~eqvRlaPSmrsrkGavWtka~~~f--------e~weVev~~rVtGrG-RiGAdGlaiWYt~~~-----  120 (497)
T KOG3838|consen   56 WSHHGDAIA-SSEQVRLAPSMRSRKGAVWTKASVPF--------ENWEVEVQFRVTGRG-RIGADGLAIWYTRGR-----  120 (497)
T ss_pred             eeecCcccc-cccceeeccccccccCceeecccCCc--------ccceEEEEEEecccc-cccCCceEEEEecCC-----
Confidence            3444 6665 667899999 4567899776665554        458889999999874 456999999988643     


Q ss_pred             CCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCc-c-cce--------eeecccCCC-CceeEEE
Q 042831          128 NKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVK-S-KKN--------VSWWSDVKS-GRRNEAW  196 (645)
Q Consensus       128 ~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~-s-~~~--------~~~~~~~~~-g~~~~~~  196 (645)
                      +--|.-+|-.+.= +|      +++=||.|-|..--|..-|.|-.|.-. + ...        .++--++.| --+..|+
T Consensus       121 G~~GpVfGg~d~W-nG------igiffDSfdnD~qknnP~Is~~lndGt~~ydh~~DGasQ~LssCqrDFRNkPyPvRar  193 (497)
T KOG3838|consen  121 GHVGPVFGGLDSW-NG------IGIFFDSFDNDGQKNNPAISVLLNDGTIPYDHPGDGASQGLSSCQRDFRNKPYPVRAR  193 (497)
T ss_pred             Ccccccccccccc-cc------eEEEeecccccCCcCCccEEEEecCCcccccCCCccHHHHHHHhhHHhccCCCCceEE
Confidence            1223333322111 11      799999998865556667777666532 1 111        122123444 2478899


Q ss_pred             EEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccceeeeEEEEEeec
Q 042831          197 ISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEF  259 (645)
Q Consensus       197 I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~wsf  259 (645)
                      |+|=  .++|+|-+.+.=++. ..+-++..++- -+||..-|.|.||+||....-|++++..-
T Consensus       194 ItY~--~nvLtv~innGmtp~-d~yE~C~rve~-~~lp~nGyFGvSAATGgLADDHDVl~Flt  252 (497)
T KOG3838|consen  194 ITYY--GNVLTVMINNGMTPS-DDYEFCVRVEN-LLLPPNGYFGVSAATGGLADDHDVLSFLT  252 (497)
T ss_pred             EEEe--ccEEEEEEcCCCCCC-CCcceeEeccc-eeccCCCeeeeeecccccccccceeeeEE
Confidence            9998  588999987533322 34445554432 23477899999999999999999987653

>KOG3839 consensus Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans [Intracellular trafficking, secretion, and vesicular transport]

Probab=98.51  E-value=5.3e-07  Score=90.15  Aligned_cols=195  Identities=20%  Similarity=0.229  Sum_probs=124.4

Q ss_pred             eeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCCCC
Q 042831           35 LTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYAD  112 (645)
Q Consensus        35 ~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~  112 (645)
                      ++=.|.+=. ....+..+. ...+ ..--++||. .+++.|-++=..||..        -+|.-.+.|.+..+.....||
T Consensus        60 L~~Py~g~g-~r~~~W~~~Gstvv-~~~~irLT~d~qsk~GAv~n~~Pv~s--------~~wev~v~fkv~~~s~~lfgd  129 (351)
T KOG3839|consen   60 LSKPYQGVG-GRQPNWNLSGSTVV-TSNYIRLTPDEQSKSGAVWNRQPVFS--------RDWEVLVHFKVHGQSKNLFGD  129 (351)
T ss_pred             ccccccccc-ccccCccccccEEE-EeeeeeccccccccccccccCCCccc--------cceeEEEEEEEecCCCccccc
Confidence            444444433 224456666 5555 456799999 7889999999999974        359999999999988888999


Q ss_pred             eEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCC---CCceeeecCCC-ccc---------c
Q 042831          113 GLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPT---FSHVGIDINSV-KSK---------K  179 (645)
Q Consensus       113 GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~---~~hvgidvns~-~s~---------~  179 (645)
                      |||+.++-...+     .|..+|-++.-       +..||=.|||.|..-|.   ..-|.+.+|.. .|.         .
T Consensus       130 G~Aiw~t~Er~q-----~GPvFG~~dkF-------~GL~vfidtY~n~~g~~~~v~P~isvmv~~gs~sYD~~~Dg~~te  197 (351)
T KOG3839|consen  130 GMAIWYTKERAQ-----PGPVFGSKDKF-------TGLAVFIDTYGNHNGPHEHVFPYISVMVNIGSLSYDHSKDGTHTE  197 (351)
T ss_pred             ceEEEeeccccc-----CCCCCCCcccc-------eeEEEEEeccCCcCCCcccceeeEEEEeccCCcccccCCCCCccc
Confidence            999999987633     55667755432       23899999998863222   12333333221 111         0


Q ss_pred             eeeecccCCCC-ceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcC-CCCceEEEEeecccceeeeEEEEEe
Q 042831          180 NVSWWSDVKSG-RRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQH-LPEFVTFGFSMATGVDFAIFSIYSW  257 (645)
Q Consensus       180 ~~~~~~~~~~g-~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~-l~~~~~vGfsastg~~~~~~~i~~w  257 (645)
                      -+.+..++++. ---.+-|.|+.  ++|++..+..+..     ...--.++..+ +|.--++|+||+||+..+.|.+.+=
T Consensus       198 l~gc~a~~rn~~~dt~~~iry~~--~~l~~~~dl~~~~-----~~~~c~~~n~v~lp~g~~fg~SasTGdlSd~HdivS~  270 (351)
T KOG3839|consen  198 LAGCTANFRNLPHDTLVVIRYEK--KTLSISIDLEGPN-----EWIDCFSLNNVELPLGYFFGVSASTGDLSDSHDIVSL  270 (351)
T ss_pred             cccceeeeccCCCcceeEEEecC--CceEEEEecCCCc-----eeeeeeeecceecccceEEeeeeccCccchhhHHHHh
Confidence            01111112221 12346788987  6666665543321     23444555555 4777899999999999999998754


Q ss_pred             e
Q 042831          258 E  258 (645)
Q Consensus       258 s  258 (645)
                      .
T Consensus       271 k  271 (351)
T KOG3839|consen  271 K  271 (351)
T ss_pred             h
Confidence            3

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.50  E-value=3.4e-08  Score=108.30  Aligned_cols=155  Identities=19%  Similarity=0.251  Sum_probs=103.0

Q ss_pred             HHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc--------ceeecccCccccCcccccc
Q 042831          457 QDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS--------QTTVLAGTMGYMAPECATT  528 (645)
Q Consensus       457 ~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~  528 (645)
                      .+++.||.|+|.  ...+||++|.|++|.++.++..||+.|+.+.........        ..........|.|||++..
T Consensus       106 ~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~  183 (700)
T KOG2137|consen  106 GNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG  183 (700)
T ss_pred             hcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence            345589999998  588999999999999999999999999987644331111        1111234567999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCC
Q 042831          529 GKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAH  607 (645)
Q Consensus       529 ~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  607 (645)
                      ...+.++|+||+||++|-+.. |+.-+.........     ..+... +....   .......+    .++.+=+.+.+.
T Consensus       184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~-----~~~~~~-~~~~~---~~~s~~~p----~el~~~l~k~l~  250 (700)
T KOG2137|consen  184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSY-----SFSRNL-LNAGA---FGYSNNLP----SELRESLKKLLN  250 (700)
T ss_pred             ccccccccceeeeeEEEEEecCCcchhhccCCcchh-----hhhhcc-ccccc---ccccccCc----HHHHHHHHHHhc
Confidence            889999999999999999995 44444432221111     011000 00000   00112222    334444456789


Q ss_pred             CCCCCCCCHHHHHHHhccC
Q 042831          608 PDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       608 ~dP~~RPs~~evl~~L~~~  626 (645)
                      .++..||++.++....-+.
T Consensus       251 ~~~~~rp~~~~l~~~~ff~  269 (700)
T KOG2137|consen  251 GDSAVRPTLDLLLSIPFFS  269 (700)
T ss_pred             CCcccCcchhhhhcccccC
Confidence            9999999999988877765

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.46  E-value=2.2e-06  Score=84.08  Aligned_cols=106  Identities=21%  Similarity=0.255  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHHhcCCC--CccEEEeeeeeC----CeEEEEEEecCCC-ChhhhhhhcCCCCCHHHHHHHHHHHHHHHHH
Q 042831          393 IKEYASEVKIISRLRHR--NLVQLLGWCHEK----KELLLVYEFMPNG-SLDSHLFKENSLLTWEFRYKIAQDLASGLLY  465 (645)
Q Consensus       393 ~~~~~~Ei~~l~~l~H~--nlv~l~~~~~~~----~~~~lV~Ey~~~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~y  465 (645)
                      .....+|...+.+|+..  ...+.+++....    ...+||+|++++. +|.+++..... ++...+..++.+++..+.-
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~  133 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAK  133 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHH
Confidence            34677888888888543  345666666543    2458999999874 78888864322 6677788999999999999


Q ss_pred             HHhhcCCCeeeccCCCCCeEECCCC---cEEEeeccCccc
Q 042831          466 LQEEWEQCVVHRDIKSSNIMLDSNF---NAKIGDFGLARL  502 (645)
Q Consensus       466 LH~~~~~~ivH~Dlkp~NILld~~~---~~kl~DfGla~~  502 (645)
                      ||.   .+|+|+|++++|||++.+.   .+.++||+-++.
T Consensus       134 lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  134 LHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            999   9999999999999998876   899999998764

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.45  E-value=3.3e-06  Score=87.69  Aligned_cols=192  Identities=16%  Similarity=0.237  Sum_probs=129.1

Q ss_pred             CCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeee------eeCCe-EEEE
Q 042831          356 DDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWC------HEKKE-LLLV  427 (645)
Q Consensus       356 ~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~------~~~~~-~~lV  427 (645)
                      ..+.||+|+.+.+|-.---   ...+-|++.........+.   ++.|... .||-+..=+.|=      -+++. .-+.
T Consensus        15 ~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl   88 (637)
T COG4248          15 PGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL   88 (637)
T ss_pred             CCccccCCccceeeecchh---hchhheeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence            4678999999999964222   1234577765433322222   2223332 455443323331      12222 5667


Q ss_pred             EEecCCCChhhhhhh------cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          428 YEFMPNGSLDSHLFK------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      |+.+++-.--..+..      +.....|...++.++.+|.+.+-||+   .|.+-+|++++|+|+.+++.+.|.|=..-.
T Consensus        89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq  165 (637)
T COG4248          89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ  165 (637)
T ss_pred             cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEEccccee
Confidence            776655421111211      22467899999999999999999998   899999999999999999999999865544


Q ss_pred             cccccCCcceeecccCccccCccccc-----cCCCCcchhHHHHHHHHHHHHcC-CCCCCCCC
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECAT-----TGKASKESDVYSFGIVALEIACG-RKPINPKA  558 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~~sDV~SfGvll~elltG-~~pf~~~~  558 (645)
                      ..  ..+......+|...|.+||.-.     +..-+...|-|.+|+++++++.| +.||.+..
T Consensus       166 i~--~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~  226 (637)
T COG4248         166 IN--ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIP  226 (637)
T ss_pred             ec--cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCccc
Confidence            32  2334455677899999999643     33457889999999999999985 99997543

>cd06900 lectin_VcfQ VcfQ bacterial pilus biogenesis protein, lectin domain

Probab=98.45  E-value=1.1e-05  Score=78.02  Aligned_cols=189  Identities=20%  Similarity=0.156  Sum_probs=107.9

Q ss_pred             CCCcEecCC-CCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCCCCeEEEEEccCCCCCCCCCCCCcccCc
Q 042831           59 SNRVIQLPA-NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLT  137 (645)
Q Consensus        59 ~~~~~~Lt~-~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~  137 (645)
                      .+|.||||+ ..++.|-+.|.++++--+    +.  ...+|.+..-.. ...++||+||||+-..-....+..||.||+-
T Consensus        30 ~~g~LRLT~~~~nqata~~~~~~FPs~~----n~--v~veFd~yayg~-~g~GADGia~vLsDasv~p~~G~fGGsLGYa  102 (255)
T cd06900          30 VNNRLRLTDASGNQATAVTLQRLFPSAG----NY--VEVEFDYYAYGS-GGNGADGVALVLSDASVTPQAGAFGGSLGYA  102 (255)
T ss_pred             ccCeEEeccCccCcceeEEEeeeeccCC----Ce--EEEEEEEEEecC-CCCCCceEEEEEeCCCcCCcCCCcCcccccc
Confidence            468999999 778999999999997532    11  677788776654 4667999999998443221246678999997


Q ss_pred             cCC-CCCCCCCCEEEEEEecccCCCCCCCC---ceeeecCCCc-----c--cceeee------c--ccCC------CCce
Q 042831          138 KDN-EPLNSSIPFVAVEFDVYVNSWDPTFS---HVGIDINSVK-----S--KKNVSW------W--SDVK------SGRR  192 (645)
Q Consensus       138 ~~~-~~~~~~~~~vaVEfDt~~n~~d~~~~---hvgidvns~~-----s--~~~~~~------~--~~~~------~g~~  192 (645)
                      ... ....-..-.++|-||-|-|.-.++..   -.|---|+|.     +  ..+...      +  ++..      .+-+
T Consensus       103 ~~~~~~~GfaGGwLGiGlDEyGNFsn~~eg~~~~~g~r~~sV~vRGsg~g~~gY~yl~gt~~~~~~id~~~~~~~~~~hr  182 (255)
T cd06900         103 QRNDGVPGFAGGWLGIGLDEYGNFSNPNEGRNGFSGRRPQSVTVRGSGSGYTGYKYITGTGVLPPGIDNNSTSTPAPGHR  182 (255)
T ss_pred             cccCCCCccccceEEEEEeccccccCCCCCccCCcccccceEEEECCCCCCcCceEecccCCCCcccccCCCCCCCCceE
Confidence            654 22233456789999998775222221   1121112211     1  111111      0  0111      1233


Q ss_pred             eEEEEEEcCC-CceEEEEEecCCCcccccceee--EeeccC--cCCCCceEEEEeecccceeeeEEEE
Q 042831          193 NEAWISYNSS-THNLSVAFTGFRNNLVVMQGLD--YQVDLR--QHLPEFVTFGFSMATGVDFAIFSIY  255 (645)
Q Consensus       193 ~~~~I~Y~~~-~~~l~v~l~~~~~~~~~~~~ls--~~vdl~--~~l~~~~~vGfsastg~~~~~~~i~  255 (645)
                      .++.||=... ...|+|.-+-.+... -.+++.  ..++..  ..+|+..+++|++|||...-.|.|-
T Consensus       183 Y~i~Ids~~~~~~~vsV~R~~~~gg~-~~~~I~~~d~~~~~~q~avP~~f~lS~TgSTGgstN~HEId  249 (255)
T cd06900         183 YRITIDSTNGDNAWLSVERDIGNGGA-YFVVILTFDALAEQNQDAIPENFYLSFTGSTGGSTNTHEID  249 (255)
T ss_pred             EEEEEecCCCCceEEEEEEEccCCce-eEEeecceeeccccCCCCCCccEEEEEEecCCCcccceeec
Confidence            4444443322 233455444222111 011111  112333  6789999999999999988888773

This family includes bacterial proteins homologous to the VcfQ (also known as MshQ) bacterial pilus biogenesis protein. VcfQ is encoded by the vcfQ gene of the type IV pilus gene cluster of Vibrio cholerae and is essential for type IV pilus assembly. VcfQ has a Laminin G-like domain as well as an L-type lectin domain.

>PRK09902 hypothetical protein; Provisional

Probab=98.37  E-value=6.9e-06  Score=79.55  Aligned_cols=137  Identities=20%  Similarity=0.149  Sum_probs=103.2

Q ss_pred             cCcCCcEEEEEEEEcCCCeEEEEEEeccC---C---hhhHHHHHHHHHHHHhcCCC--CccEEEeeee-e----CCeEEE
Q 042831          360 LGQGGFGGVYKGFFRETNSYIAVKRVSQG---S---KQGIKEYASEVKIISRLRHR--NLVQLLGWCH-E----KKELLL  426 (645)
Q Consensus       360 LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~---~~~~~~~~~Ei~~l~~l~H~--nlv~l~~~~~-~----~~~~~l  426 (645)
                      -|+||-+.|++-.+.  |..+-+|+-...   +   +-+...|.+|+..|.+|...  .+.+.. ++. .    .-.-+|
T Consensus        26 ~~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~L  102 (216)
T PRK09902         26 YRRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALL  102 (216)
T ss_pred             cCCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEE
Confidence            467899999998765  346889976521   1   33567899999999998642  344555 332 1    124689


Q ss_pred             EEEecCC-CChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc--EEEeeccCccc
Q 042831          427 VYEFMPN-GSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN--AKIGDFGLARL  502 (645)
Q Consensus       427 V~Ey~~~-gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~--~kl~DfGla~~  502 (645)
                      |+|-+++ -+|.+++.+. ....+..++..++.+++..+.-||.   .++.|+|+.+.||+++.++.  ++++||.-++.
T Consensus       103 VTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        103 VTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             EEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            9997753 5788887543 2356788889999999999999999   99999999999999986666  99999987653

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.35  E-value=4.7e-06  Score=82.64  Aligned_cols=137  Identities=19%  Similarity=0.198  Sum_probs=93.8

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--------------------C--hhhHHHHHHHHHHHHhcCCC--
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--------------------S--KQGIKEYASEVKIISRLRHR--  409 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--------------------~--~~~~~~~~~Ei~~l~~l~H~--  409 (645)
                      ..+..+||-|--+.||.|.... |.++|||.=+..                    +  .-......+|.+.|.+|.-.  
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~-g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPK-GRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEECCC-CCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            4457889999999999999874 788999942211                    0  00123456799999998755  


Q ss_pred             CccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC
Q 042831          410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN  489 (645)
Q Consensus       410 nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~  489 (645)
                      .+.+.++|    +.-++||||.++--|...-.      +.+....|+..|++-+.-+-.   .|+||+|+.+-||+++++
T Consensus       172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r~------~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV~~d  238 (304)
T COG0478         172 KVPKPIAW----NRHAVVMEYIEGVELYRLRL------DVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILVTED  238 (304)
T ss_pred             CCCCcccc----ccceeeeehcccceeecccC------cccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEEecC
Confidence            66666554    34589999998866644321      222233344444433333334   799999999999999999


Q ss_pred             CcEEEeeccCccccc
Q 042831          490 FNAKIGDFGLARLVE  504 (645)
Q Consensus       490 ~~~kl~DfGla~~~~  504 (645)
                      |.+.++||=.+...+
T Consensus       239 g~~~vIDwPQ~v~~~  253 (304)
T COG0478         239 GDIVVIDWPQAVPIS  253 (304)
T ss_pred             CCEEEEeCcccccCC
Confidence            999999997765443

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.25  E-value=6.5e-06  Score=90.78  Aligned_cols=146  Identities=16%  Similarity=0.261  Sum_probs=96.6

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhh----------------------------------------
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQG----------------------------------------  392 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~----------------------------------------  392 (645)
                      .|+ .+.|+.++-|.||+|+++. |+.||||+.+.+-++.                                        
T Consensus       127 eF~-~~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~  204 (517)
T COG0661         127 EFE-PEPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE  204 (517)
T ss_pred             HcC-CCchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence            444 3789999999999999986 8999999876542211                                        


Q ss_pred             HHHHHHHHHHHHhcC-----CCCccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHH
Q 042831          393 IKEYASEVKIISRLR-----HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ  467 (645)
Q Consensus       393 ~~~~~~Ei~~l~~l~-----H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH  467 (645)
                      +-++..|..-+.+++     .+++.=-.=|..-.+...|+|||++|-.+.+....+....+   +..++..++++  |+-
T Consensus       205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d---~k~ia~~~~~~--f~~  279 (517)
T COG0661         205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGID---RKELAELLVRA--FLR  279 (517)
T ss_pred             HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCC---HHHHHHHHHHH--HHH
Confidence            012444555555553     23332112223335667999999999999887533333344   33444444433  222


Q ss_pred             hhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       468 ~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +....++.|.|..|.||+++.++.+.+.|||+....+.
T Consensus       280 q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         280 QLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             HHHhcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            22236899999999999999999999999999876543

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.18  E-value=2.3e-05  Score=77.97  Aligned_cols=137  Identities=16%  Similarity=0.197  Sum_probs=84.4

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCC--ccEEEeeeeeCCeEEEEEEecCCCC
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN--LVQLLGWCHEKKELLLVYEFMPNGS  435 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--lv~l~~~~~~~~~~~lV~Ey~~~gs  435 (645)
                      .+||+|..+.||+.   . +..+++|......  ......+|.+++..+..-.  +.+.++++...+...+|||+++|.+
T Consensus         7 ~~i~~G~t~~~y~~---~-~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172         7 TQTGEGGNGESYTH---K-TGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR   80 (226)
T ss_pred             eeecCCCCcceeEe---c-CCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence            57899999999984   2 3457788876433  2345678999999986443  4677888877778889999998863


Q ss_pred             -hhhhh---------------------hhc-CCCCCHHHHH-HHHH----------HHHH-HHHHHHhh-cCCCeeeccC
Q 042831          436 -LDSHL---------------------FKE-NSLLTWEFRY-KIAQ----------DLAS-GLLYLQEE-WEQCVVHRDI  479 (645)
Q Consensus       436 -L~~~l---------------------~~~-~~~l~~~~~~-~i~~----------~ia~-gL~yLH~~-~~~~ivH~Dl  479 (645)
                       +...+                     +.- -.......+. .+..          .+.+ ...+|... ....++|+|+
T Consensus        81 ~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~  160 (226)
T TIGR02172        81 SFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF  160 (226)
T ss_pred             chhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence             21111                     110 0011111100 0100          0111 11222211 1345789999


Q ss_pred             CCCCeEECCCCcEEEeeccCcc
Q 042831          480 KSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       480 kp~NILld~~~~~kl~DfGla~  501 (645)
                      .|.||++++++ +.|.||+.+.
T Consensus       161 ~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       161 QIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             CCCcEEEcCCC-cEEEechhcC
Confidence            99999999888 9999999875

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.12  E-value=3.6e-07  Score=99.25  Aligned_cols=185  Identities=18%  Similarity=0.130  Sum_probs=134.8

Q ss_pred             CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCC-ccEEEeeeeeCCeEEEEEEecC
Q 042831          354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN-LVQLLGWCHEKKELLLVYEFMP  432 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~n-lv~l~~~~~~~~~~~lV~Ey~~  432 (645)
                      +...+-+++++.++++|.+...+...+ ++.+...     ....-++++|.+++||| .+..++-++.+....++++++.
T Consensus       244 s~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s  317 (829)
T KOG0576|consen  244 SEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICS  317 (829)
T ss_pred             hHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhc
Confidence            334456889999999999876544333 6655433     34456899999999999 7777888888888999999998


Q ss_pred             CC-ChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          433 NG-SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       433 ~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      .+ +-....-.....+...+...+...-+++|+|||+   ..=+|+|    ||+..+ ...|.+||+....+....  ..
T Consensus       318 ~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~---~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--~~  387 (829)
T KOG0576|consen  318 TGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHS---SYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--KP  387 (829)
T ss_pred             CCccccccCChhhHhhhhhhhhhhhhhhccccccccc---ccccCcc----cccccc-cccccccccCCcccCccc--cc
Confidence            77 2222211122234444555666677788999998   3347888    777665 578999999987654332  34


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPI  554 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf  554 (645)
                      ....+++.++|||+...+.+..+.|+|+.|+---++.-|-.|-
T Consensus       388 ~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr  430 (829)
T KOG0576|consen  388 RTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR  430 (829)
T ss_pred             ccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence            4567999999999999999999999999998777777776664

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.00  E-value=4.8e-05  Score=75.42  Aligned_cols=141  Identities=20%  Similarity=0.196  Sum_probs=85.1

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCC--CccEEEeeeee---CCeEEEEEEec
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHR--NLVQLLGWCHE---KKELLLVYEFM  431 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~--nlv~l~~~~~~---~~~~~lV~Ey~  431 (645)
                      .+.|+.|..+.||+....+  ..+++|.....  .....+..|..++..+...  .+.+++.++..   ....+++|+++
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i   77 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYI   77 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEE
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEe
Confidence            3568899999999998875  47899987544  4556777899998888633  35566665433   34579999999


Q ss_pred             CCCChhh----------------hh---hhc---CCCCCHHH---------HHHH------------HHHHHH-HHHHHH
Q 042831          432 PNGSLDS----------------HL---FKE---NSLLTWEF---------RYKI------------AQDLAS-GLLYLQ  467 (645)
Q Consensus       432 ~~gsL~~----------------~l---~~~---~~~l~~~~---------~~~i------------~~~ia~-gL~yLH  467 (645)
                      ++..+..                .+   ++.   .....+..         ....            ...+.+ .+..++
T Consensus        78 ~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (239)
T PF01636_consen   78 PGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELE  157 (239)
T ss_dssp             SSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHH
Confidence            9988877                11   111   01111110         0000            112222 333444


Q ss_pred             hh----cCCCeeeccCCCCCeEEC-CCCcEEEeeccCcc
Q 042831          468 EE----WEQCVVHRDIKSSNIMLD-SNFNAKIGDFGLAR  501 (645)
Q Consensus       468 ~~----~~~~ivH~Dlkp~NILld-~~~~~kl~DfGla~  501 (645)
                      ..    ....++|+|+.|.|||++ +++.+-|.||+.+.
T Consensus       158 ~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  158 ALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             HHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             hhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence            32    346799999999999999 66667899998775

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.00  E-value=8.6e-05  Score=72.30  Aligned_cols=137  Identities=12%  Similarity=0.113  Sum_probs=90.3

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHH---------HHHHHHHHHhcCCC---CccEEEee
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKE---------YASEVKIISRLRHR---NLVQLLGW  417 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~---------~~~Ei~~l~~l~H~---nlv~l~~~  417 (645)
                      ..++|...+.+-......|.+-...  |..+++|..+.......+.         ..+++..+.+++..   ..+.++..
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIei~--~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~  106 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIEID--GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA  106 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEEEC--CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence            3467777777777776666665553  6789999876554333222         23445555555432   22232222


Q ss_pred             ee-----eCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcE
Q 042831          418 CH-----EKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA  492 (645)
Q Consensus       418 ~~-----~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~  492 (645)
                      +.     -....+|+|||++|..|.+...     ++.    .+...+.+++.-||.   .|+.|+|..|.|+++++++ +
T Consensus       107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~---~G~~HGD~hpgNFlv~~~~-i  173 (229)
T PF06176_consen  107 AEKKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHK---HGFYHGDPHPGNFLVSNNG-I  173 (229)
T ss_pred             eeeeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHH---cCCccCCCCcCcEEEECCc-E
Confidence            22     2345679999999988866531     222    345667778899998   9999999999999998654 9


Q ss_pred             EEeeccCcc
Q 042831          493 KIGDFGLAR  501 (645)
Q Consensus       493 kl~DfGla~  501 (645)
                      ++.||+..+
T Consensus       174 ~iID~~~k~  182 (229)
T PF06176_consen  174 RIIDTQGKR  182 (229)
T ss_pred             EEEECcccc
Confidence            999998765

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.99  E-value=4.1e-05  Score=84.24  Aligned_cols=141  Identities=16%  Similarity=0.246  Sum_probs=93.5

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhh-------------------------------------HHHHHHH
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQG-------------------------------------IKEYASE  399 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~~~E  399 (645)
                      .+.||.-..|.||+|++++ |+.||||+-+..-++.                                     +-+|..|
T Consensus       166 ~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E  244 (538)
T KOG1235|consen  166 EEPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE  244 (538)
T ss_pred             cchhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence            4789999999999999987 8999999865432211                                     0124445


Q ss_pred             HHHHHhc----CCCC------ccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 042831          400 VKIISRL----RHRN------LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE  469 (645)
Q Consensus       400 i~~l~~l----~H~n------lv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~  469 (645)
                      ++-..+.    +|-+      |.+++  ..-.....|+||||+|..+.+...-....++...   |+..+.++  |++..
T Consensus       245 A~Nae~~~~~f~~~~~~~~V~VP~Vy--~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~---i~~~l~~~--~~~qI  317 (538)
T KOG1235|consen  245 AKNAERFRENFKDFSLLTYVLVPKVY--WDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHD---ILNKLVEA--YLEQI  317 (538)
T ss_pred             HHhHHHHHHHHHhcccccceeCCeeh--hhcCcceEEEEEecCCccCCCHHHHHHcCCCHHH---HHHHHHHH--HHHHH
Confidence            5444433    3444      22222  2234567999999999988876543444455443   33333332  33333


Q ss_pred             cCCCeeeccCCCCCeEEC----CCCcEEEeeccCcccccc
Q 042831          470 WEQCVVHRDIKSSNIMLD----SNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       470 ~~~~ivH~Dlkp~NILld----~~~~~kl~DfGla~~~~~  505 (645)
                      ...|++|+|=.|.||+++    .++.+.+-|||+.....+
T Consensus       318 f~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  318 FKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             HhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            447899999999999998    367899999999876544

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.95  E-value=0.00012  Score=72.13  Aligned_cols=154  Identities=19%  Similarity=0.170  Sum_probs=96.6

Q ss_pred             cChHHHHHhhcCCCCCCc---cCcCCcEEEEEEEEcCCCeEEEEEEeccCChhh-------------------H-----H
Q 042831          342 FPYKELALATNDFNDDQK---LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQG-------------------I-----K  394 (645)
Q Consensus       342 ~~~~el~~~~~~f~~~~~---LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~-------------------~-----~  394 (645)
                      .+++.+.....+..+...   |..|--..||+|... ++..+|+|++.......                   .     .
T Consensus        35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~  113 (268)
T COG1718          35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA  113 (268)
T ss_pred             HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccC-CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence            445556655555555555   456667789998763 47899999885431110                   0     1


Q ss_pred             HHHHHHHHHHhcC--CCCccEEEeeeeeCCeEEEEEEecCCCChh-hhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcC
Q 042831          395 EYASEVKIISRLR--HRNLVQLLGWCHEKKELLLVYEFMPNGSLD-SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE  471 (645)
Q Consensus       395 ~~~~Ei~~l~~l~--H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL~-~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~  471 (645)
                      ....|+.-|.++.  +=.+.+-+++.    .-.|||||+....+. -.|..  -.+.......+..++++.+.-|-.  .
T Consensus       114 W~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD--v~~e~~e~~~~~~~~v~~~~~l~~--~  185 (268)
T COG1718         114 WARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD--VPLELEEAEGLYEDVVEYMRRLYK--E  185 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCccc--CCcCchhHHHHHHHHHHHHHHHHH--h
Confidence            1335666676664  33333444433    237999999654221 11211  122222456667777777776655  3


Q ss_pred             CCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       472 ~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      .++||+||+.-|||+. ++.+.|+|+|.+....+
T Consensus       186 a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~h  218 (268)
T COG1718         186 AGLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDH  218 (268)
T ss_pred             cCcccccchhhheEEE-CCeEEEEECccccccCC
Confidence            7899999999999999 78999999999876554

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.94  E-value=4.4e-05  Score=73.57  Aligned_cols=103  Identities=23%  Similarity=0.228  Sum_probs=83.8

Q ss_pred             HHHHHHHhcCC-CCccEEEeeeeeCCeEEEEEEecCCCChhhhhh--hcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCe
Q 042831          398 SEVKIISRLRH-RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF--KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCV  474 (645)
Q Consensus       398 ~Ei~~l~~l~H-~nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i  474 (645)
                      .|.-++..+++ +++.+++|+|-+    ++|.||.+.+++...-.  .+-...+|..|.+|+.++++.+.+|++.....+
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~   83 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFF   83 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence            58888888986 699999999943    77999998776643210  111346899999999999999999998665668


Q ss_pred             eeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          475 VHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       475 vH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      .-.|++++|+-+++++++|+.|...+...+
T Consensus        84 ~lcDv~~~nfgv~~~~~lk~iDld~v~~~~  113 (188)
T PF12260_consen   84 YLCDVSPDNFGVNDDGRLKLIDLDDVFVED  113 (188)
T ss_pred             EEeecchHHeEEeCCCcEEEEechhcchhH
Confidence            899999999999999999999998876543

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.89  E-value=0.00015  Score=73.00  Aligned_cols=138  Identities=17%  Similarity=0.153  Sum_probs=84.3

Q ss_pred             ccCcCCc-EEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeEEEEEEecCCCCh
Q 042831          359 KLGQGGF-GGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLLVYEFMPNGSL  436 (645)
Q Consensus       359 ~LG~G~f-G~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL  436 (645)
                      .|-.|.. ..||+....  +..+.+|+.....   ..+..+|++++..+. +--+.+++++....+..++|||+++|.+|
T Consensus         5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l   79 (244)
T cd05150           5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPA   79 (244)
T ss_pred             ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccH
Confidence            3445555 788998764  3568888775432   345678998888874 44466788877776778999999998877


Q ss_pred             hhhh-------------------hhc---CCCCCH--HHHHHHH-H-------------------HHHHHHHHHHh----
Q 042831          437 DSHL-------------------FKE---NSLLTW--EFRYKIA-Q-------------------DLASGLLYLQE----  468 (645)
Q Consensus       437 ~~~l-------------------~~~---~~~l~~--~~~~~i~-~-------------------~ia~gL~yLH~----  468 (645)
                      ....                   +.-   ......  ..+.... .                   .+...+..|-.    
T Consensus        80 ~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (244)
T cd05150          80 AALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPA  159 (244)
T ss_pred             hHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCC
Confidence            6431                   100   001110  0000000 0                   01111222211    


Q ss_pred             hcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       469 ~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      .....++|+|+.|.|||++++....|.||+.+.
T Consensus       160 ~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         160 EEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             cCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            113569999999999999998778899999774

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PLN02876 acyl-CoA dehydrogenase

Probab=97.81  E-value=0.00026  Score=83.95  Aligned_cols=80  Identities=11%  Similarity=0.256  Sum_probs=58.5

Q ss_pred             CCccCcCCcEEEEEEEEcCCC--eEEEEEEeccCC-hhhHHHHHHHHHHHHhcC-CCCc--cEEEeeeeeC---CeEEEE
Q 042831          357 DQKLGQGGFGGVYKGFFRETN--SYIAVKRVSQGS-KQGIKEYASEVKIISRLR-HRNL--VQLLGWCHEK---KELLLV  427 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~--~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-H~nl--v~l~~~~~~~---~~~~lV  427 (645)
                      .+.++.|.+..+|+......+  ..+++|+..... ......+.+|+++++.+. |.++  .+++.+|.+.   +..++|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            567899999999998775432  457777764432 123457889999999996 6665  7888888764   467899


Q ss_pred             EEecCCCCh
Q 042831          428 YEFMPNGSL  436 (645)
Q Consensus       428 ~Ey~~~gsL  436 (645)
                      |||+++..+
T Consensus       123 ME~v~G~~~  131 (822)
T PLN02876        123 MEYLEGRIF  131 (822)
T ss_pred             EEecCCccc
Confidence            999987654

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.70  E-value=0.00046  Score=66.53  Aligned_cols=125  Identities=23%  Similarity=0.316  Sum_probs=90.9

Q ss_pred             cCCCCCCccCcCCc-EEEEEEEEcCCCeEEEEEEecc---CCh------------------hhHHHHHHHHHHHHhcC--
Q 042831          352 NDFNDDQKLGQGGF-GGVYKGFFRETNSYIAVKRVSQ---GSK------------------QGIKEYASEVKIISRLR--  407 (645)
Q Consensus       352 ~~f~~~~~LG~G~f-G~Vy~g~~~~~~~~vavK~~~~---~~~------------------~~~~~~~~Ei~~l~~l~--  407 (645)
                      .+++..+.||.|.. |.||++...  |+.+|+|.+..   ...                  .....|..|.+..++|+  
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~--g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID--GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC--CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            67888999999999 999999986  67999999322   100                  11235888999888885  


Q ss_pred             -CCCc--cEEEeeeeeC------------------CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHH
Q 042831          408 -HRNL--VQLLGWCHEK------------------KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYL  466 (645)
Q Consensus       408 -H~nl--v~l~~~~~~~------------------~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yL  466 (645)
                       +.++  |+.+||..-.                  ....||.||.+...          .+.    .+-+.+|.+-|..+
T Consensus       115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~----~~~~~~~~~dl~~~  180 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQ----IRDIPQMLRDLKIL  180 (207)
T ss_pred             cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccc----hhHHHHHHHHHHHH
Confidence             4566  8999997322                  12467888876543          112    23345666777888


Q ss_pred             HhhcCCCeeeccCCCCCeEECCCCcEEEeeccCc
Q 042831          467 QEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA  500 (645)
Q Consensus       467 H~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla  500 (645)
                      |.   .+|+-+|+++.|..     .-||+|||.+
T Consensus       181 ~k---~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  181 HK---LGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HH---CCeeeccCcccccc-----CCEEEecccC
Confidence            88   99999999999975     4589999864

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.64  E-value=0.0012  Score=63.95  Aligned_cols=133  Identities=21%  Similarity=0.290  Sum_probs=90.7

Q ss_pred             CCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC----------------hhhHHHHHHHHHHHHhcC------CCCcc
Q 042831          355 NDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS----------------KQGIKEYASEVKIISRLR------HRNLV  412 (645)
Q Consensus       355 ~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~----------------~~~~~~~~~Ei~~l~~l~------H~nlv  412 (645)
                      +....||+|+.-.||.--.   .....||+.....                ....++..+|+.-..++.      +.+|.
T Consensus         4 ~~~~~i~~G~~R~cy~HP~---dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~   80 (199)
T PF10707_consen    4 SESDLIAQGGERDCYQHPD---DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIP   80 (199)
T ss_pred             CCCcccccCCCceEEECCC---CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccc
Confidence            3457899999999996533   3446788876554                223566777777776665      78999


Q ss_pred             EEEeeeeeCCeEEEEEEecCC--C----ChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE
Q 042831          413 QLLGWCHEKKELLLVYEFMPN--G----SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML  486 (645)
Q Consensus       413 ~l~~~~~~~~~~~lV~Ey~~~--g----sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl  486 (645)
                      +++|+.+.+...-+|+|.+.+  |    +|.+++.+  ..++. ...+.   +-+-..||-.   ..|+.+|++|+||++
T Consensus        81 r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~--~~~~~-~~~~~---L~~f~~~l~~---~~Iv~~dl~~~NIv~  151 (199)
T PF10707_consen   81 RFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKE--GGLTE-ELRQA---LDEFKRYLLD---HHIVIRDLNPHNIVV  151 (199)
T ss_pred             cEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHc--CCccH-HHHHH---HHHHHHHHHH---cCCeecCCCcccEEE
Confidence            999999999989999998643  2    56666633  23444 33333   3334456665   789999999999999


Q ss_pred             CCC--C--cEEEee-ccC
Q 042831          487 DSN--F--NAKIGD-FGL  499 (645)
Q Consensus       487 d~~--~--~~kl~D-fGl  499 (645)
                      ..+  +  .+.|+| ||-
T Consensus       152 ~~~~~~~~~lvlIDG~G~  169 (199)
T PF10707_consen  152 QRRDSGEFRLVLIDGLGE  169 (199)
T ss_pred             EecCCCceEEEEEeCCCC
Confidence            532  2  466665 443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.61  E-value=0.00046  Score=69.09  Aligned_cols=73  Identities=15%  Similarity=0.191  Sum_probs=46.7

Q ss_pred             CccCcCCcE-EEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCC---CccEEEeeeeeC---CeEEEEEEe
Q 042831          358 QKLGQGGFG-GVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHR---NLVQLLGWCHEK---KELLLVYEF  430 (645)
Q Consensus       358 ~~LG~G~fG-~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~---nlv~l~~~~~~~---~~~~lV~Ey  430 (645)
                      +.|+.|+.. .||+.     +..+++|..+..  ....++.+|.+++..+...   -+.+.++.+...   ...+++||+
T Consensus         3 ~~~~~gG~~n~vy~~-----~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~   75 (235)
T cd05155           3 EPVDSGGTDNATFRL-----GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRW   75 (235)
T ss_pred             eeccCCCcccceEEc-----CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEe
Confidence            567777776 48975     224667765432  2345788899999888632   344555544332   234889999


Q ss_pred             cCCCChh
Q 042831          431 MPNGSLD  437 (645)
Q Consensus       431 ~~~gsL~  437 (645)
                      ++|.++.
T Consensus        76 i~G~~l~   82 (235)
T cd05155          76 LEGETAT   82 (235)
T ss_pred             ecCCCCC
Confidence            9987774

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.51  E-value=0.00048  Score=80.42  Aligned_cols=201  Identities=19%  Similarity=0.145  Sum_probs=134.7

Q ss_pred             HHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE----EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHh
Q 042831          393 IKEYASEVKIISRLRHRNLVQLLGWCHEKKEL----LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE  468 (645)
Q Consensus       393 ~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~----~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~  468 (645)
                      .....-|++.+..++|+|++.++.|-.++...    .+..|++..-++...+. +-...+.+..+.+..++.+||.|+|.
T Consensus       226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q-~v~~i~~~~~r~~~~~~~~GL~~~h~  304 (1351)
T KOG1035|consen  226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ-SVGSIPLETLRILHQKLLEGLAYLHS  304 (1351)
T ss_pred             HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh-hccccCHHHHHHHHHHHhhhHHHHHH
Confidence            33445677888889999999999987655432    23456777777777663 34567888888999999999999998


Q ss_pred             hcCCCeeeccCCCC---CeEECCCCcEEEe--eccCcccccccCCcceeecccCccccCccccccCCCCc--chhHHHHH
Q 042831          469 EWEQCVVHRDIKSS---NIMLDSNFNAKIG--DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASK--ESDVYSFG  541 (645)
Q Consensus       469 ~~~~~ivH~Dlkp~---NILld~~~~~kl~--DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~--~sDV~SfG  541 (645)
                         ....|.-+..+   +.-.+.++...++  ||+..+.......  ......+..+.+||......+..  ..|+|.+|
T Consensus       305 ---~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~--~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lg  379 (1351)
T KOG1035|consen  305 ---LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK--SFSDLLAEIRNADEDLKENTAKKSRLTDLWCLG  379 (1351)
T ss_pred             ---hccceeEEecccccccccCccceeecchhhhcccccCCCccc--chhhcCccccccccccccccchhhhhhHHHHHH
Confidence               45555555554   4445666777777  8888765433222  22223455678888776665544  47999999


Q ss_pred             HHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 042831          542 IVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIH  621 (645)
Q Consensus       542 vll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  621 (645)
                      ..+..+..|..+-.....      .                .+-+......    .+......|+..++++|+++.+++.
T Consensus       380 ll~~~~~~~~~i~~~~~~------~----------------~~~l~~~~~~----~~~d~~~~~~~~~~~~Rl~~~~ll~  433 (1351)
T KOG1035|consen  380 LLLLQLSQGEDISEKSAV------P----------------VSLLDVLSTS----ELLDALPKCLDEDSEERLSALELLT  433 (1351)
T ss_pred             HHHhhhhhcCcccccccc------h----------------hhhhccccch----hhhhhhhhhcchhhhhccchhhhhh
Confidence            999999988755321110      0                0001111111    3445567899999999999999999


Q ss_pred             Hhcc
Q 042831          622 VLNF  625 (645)
Q Consensus       622 ~L~~  625 (645)
                      +..-
T Consensus       434 ~~f~  437 (1351)
T KOG1035|consen  434 HPFL  437 (1351)
T ss_pred             chhc
Confidence            8753

>PRK10593 hypothetical protein; Provisional

Probab=97.50  E-value=0.0018  Score=67.34  Aligned_cols=78  Identities=9%  Similarity=0.006  Sum_probs=57.1

Q ss_pred             CCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCC---CCccEEEeeeeeC---CeEEEEE
Q 042831          355 NDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH---RNLVQLLGWCHEK---KELLLVY  428 (645)
Q Consensus       355 ~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H---~nlv~l~~~~~~~---~~~~lV~  428 (645)
                      ...+.||.|..+.||+....+ + .+.+|..+..  .....+..|.+.|+.|..   -.+.+++++|..+   +..+|||
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~~-~-~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm   92 (297)
T PRK10593         17 SRVECISEQPYAALWALYDSQ-G-NPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL   92 (297)
T ss_pred             heeeecCCccceeEEEEEcCC-C-CEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence            345679999999999986543 3 3666764331  123578899999998853   3678899888643   6689999


Q ss_pred             EecCCCCh
Q 042831          429 EFMPNGSL  436 (645)
Q Consensus       429 Ey~~~gsL  436 (645)
                      |+++++++
T Consensus        93 E~i~G~~~  100 (297)
T PRK10593         93 ERLRGVSV  100 (297)
T ss_pred             eccCCEec
Confidence            99998765

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.49  E-value=0.00095  Score=62.42  Aligned_cols=127  Identities=17%  Similarity=0.251  Sum_probs=86.3

Q ss_pred             CCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCcc-EEEeeeeeCCeEEEEEEecCCC
Q 042831          356 DDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLV-QLLGWCHEKKELLLVYEFMPNG  434 (645)
Q Consensus       356 ~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv-~l~~~~~~~~~~~lV~Ey~~~g  434 (645)
                      ..+.|++|.+|.||+|.+.  |..+|+|.-+.+++  ...+..|+++|..++-.++. +++.|-.+    ++.|||..|-
T Consensus        26 v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i~G~   97 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWR--GGEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYIDGR   97 (201)
T ss_pred             hhhhhhcccccEEEEeecc--CceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhhcCc
Confidence            3577999999999999987  56899998765544  46788899999998866654 34444332    4459999887


Q ss_pred             ChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCC-CC-CeEECCCCcEEEeeccCccc
Q 042831          435 SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIK-SS-NIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       435 sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk-p~-NILld~~~~~kl~DfGla~~  502 (645)
                      .|.+.-...    +..    -...+++.-.-|-.   .||-|..|. |. ||++.+ ..+.|+||..|..
T Consensus        98 ~L~~~~~~~----~rk----~l~~vlE~a~~LD~---~GI~H~El~~~~k~vlv~~-~~~~iIDFd~At~  155 (201)
T COG2112          98 PLGKLEIGG----DRK----HLLRVLEKAYKLDR---LGIEHGELSRPWKNVLVND-RDVYIIDFDSATF  155 (201)
T ss_pred             chhhhhhcc----cHH----HHHHHHHHHHHHHH---hccchhhhcCCceeEEecC-CcEEEEEccchhh
Confidence            886654211    222    22334444333333   788888886 34 555544 4999999998874

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.46  E-value=0.0014  Score=65.53  Aligned_cols=140  Identities=21%  Similarity=0.280  Sum_probs=81.1

Q ss_pred             CCccCcCCcEEEEEEEEcC-CCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCc-cEEEeeeeeCCeEEEEEEecCCC
Q 042831          357 DQKLGQGGFGGVYKGFFRE-TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL-VQLLGWCHEKKELLLVYEFMPNG  434 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nl-v~l~~~~~~~~~~~lV~Ey~~~g  434 (645)
                      .+.|..|-...+|+....+ .+..+++|........ ..+..+|+.++..+...++ +++++.+. .   .++|||+++.
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~-~---~~l~e~i~G~   77 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ-N---GLIYEFIPGR   77 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC-C---cEEEEeeCCC
Confidence            3567788888999987653 3467888876543221 1233478888888854333 44444332 2   4799999987


Q ss_pred             Chhhh-----------------hhhcCCC----------C-CHHHHHHHHH----------------------HHHHHHH
Q 042831          435 SLDSH-----------------LFKENSL----------L-TWEFRYKIAQ----------------------DLASGLL  464 (645)
Q Consensus       435 sL~~~-----------------l~~~~~~----------l-~~~~~~~i~~----------------------~ia~gL~  464 (645)
                      ++...                 ++.....          . .|..+..+..                      .+...+.
T Consensus        78 ~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  157 (235)
T cd05157          78 TLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEIS  157 (235)
T ss_pred             cCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHH
Confidence            76321                 1111001          1 1222111111                      1111112


Q ss_pred             HHHhh-----cCCCeeeccCCCCCeEECC-CCcEEEeeccCcc
Q 042831          465 YLQEE-----WEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLAR  501 (645)
Q Consensus       465 yLH~~-----~~~~ivH~Dlkp~NILld~-~~~~kl~DfGla~  501 (645)
                      .|-..     ....++|+|+.+.|||+++ +..+.+.||..+.
T Consensus       158 ~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         158 WLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             HHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            22111     2346999999999999998 5789999998875

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.36  E-value=0.0044  Score=66.58  Aligned_cols=77  Identities=13%  Similarity=0.147  Sum_probs=54.6

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccC------C-hhhHHHHHHHHHHHHhcC---CCCccEEEeeeeeCCeEEE
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG------S-KQGIKEYASEVKIISRLR---HRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~------~-~~~~~~~~~Ei~~l~~l~---H~nlv~l~~~~~~~~~~~l  426 (645)
                      .+.||.|.+..||++...++++.++||.-...      + ......+..|.+.|..+.   -.++.+++.+  +.+..++
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l  108 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT  108 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence            45799999999999998764468999974311      1 123456777888888763   2457777776  3355789


Q ss_pred             EEEecCCCC
Q 042831          427 VYEFMPNGS  435 (645)
Q Consensus       427 V~Ey~~~gs  435 (645)
                      ||||+++..
T Consensus       109 VME~L~~~~  117 (401)
T PRK09550        109 VMEDLSDHK  117 (401)
T ss_pred             EEecCCCcc
Confidence            999998744

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.34  E-value=0.0014  Score=66.58  Aligned_cols=137  Identities=14%  Similarity=0.071  Sum_probs=78.3

Q ss_pred             ccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCc-cEEEeeeeeCCeEEEEEEecCCCChh
Q 042831          359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL-VQLLGWCHEKKELLLVYEFMPNGSLD  437 (645)
Q Consensus       359 ~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nl-v~l~~~~~~~~~~~lV~Ey~~~gsL~  437 (645)
                      .+..|-...+|+...  ++..+++|..........-+..+|.+++..+....+ .+++..+.    -.+||||++|..+.
T Consensus         3 ~~~~G~tn~~y~~~~--~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~   76 (256)
T TIGR02721         3 TLSGGLTNRSWRIEH--PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVIT   76 (256)
T ss_pred             cCCCcCcCCeEEEEe--CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccc
Confidence            356677889998873  356788887644322211235678888988864433 34444432    26899999987664


Q ss_pred             hh-----------------hhhc---CCCCCHHHH-HHHHHHH---------HHHHHHHHhh-----cCCCeeeccCCCC
Q 042831          438 SH-----------------LFKE---NSLLTWEFR-YKIAQDL---------ASGLLYLQEE-----WEQCVVHRDIKSS  482 (645)
Q Consensus       438 ~~-----------------l~~~---~~~l~~~~~-~~i~~~i---------a~gL~yLH~~-----~~~~ivH~Dlkp~  482 (645)
                      ..                 ++..   ...++...+ .....++         ...+..+-..     ....++|+|+.|.
T Consensus        77 ~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~  156 (256)
T TIGR02721        77 LDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAY  156 (256)
T ss_pred             cccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcC
Confidence            21                 1111   111221111 1111111         1111112111     1246899999999


Q ss_pred             CeEECCCCcEEEeeccCccc
Q 042831          483 NIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       483 NILld~~~~~kl~DfGla~~  502 (645)
                      ||++++++ +.|.||+.+..
T Consensus       157 Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       157 NLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             cEEEeCCC-CEEEeccccCc
Confidence            99999877 78999998753

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK05231 homoserine kinase; Provisional

Probab=97.23  E-value=0.01  Score=62.22  Aligned_cols=140  Identities=12%  Similarity=0.133  Sum_probs=77.2

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCC--ccEEEe------eeeeCCeEEEEE
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN--LVQLLG------WCHEKKELLLVY  428 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--lv~l~~------~~~~~~~~~lV~  428 (645)
                      .+.|+.|....+|+....+ | .+++|+......   .....|+.++..|...+  +.+.+.      +....+..++++
T Consensus        27 ~~~l~~G~~n~~y~v~t~~-g-~~vLK~~~~~~~---~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~  101 (319)
T PRK05231         27 LKGIAEGIENSNFFLTTTQ-G-EYVLTLFERLTA---EDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIV  101 (319)
T ss_pred             cchhccccccceEEEEeCC-C-cEEEEEeccCCh---HHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEE
Confidence            4557777778999987643 3 588898752222   33344555565553222  333332      122355679999


Q ss_pred             EecCCCChhh-----------h---hhhcC----------CCCCH-HHHHH------------HH-HHHHHHHHHHHh--
Q 042831          429 EFMPNGSLDS-----------H---LFKEN----------SLLTW-EFRYK------------IA-QDLASGLLYLQE--  468 (645)
Q Consensus       429 Ey~~~gsL~~-----------~---l~~~~----------~~l~~-~~~~~------------i~-~~ia~gL~yLH~--  468 (645)
                      ||++|..+..           .   ++...          ..+.| .....            .. ..+...+..+..  
T Consensus       102 ~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  181 (319)
T PRK05231        102 TFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAA  181 (319)
T ss_pred             EecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhccc
Confidence            9998875421           0   11100          01112 11111            11 111112222221  


Q ss_pred             --hcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          469 --EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       469 --~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                        ....+++|+|+.+.||+++.+...-|.||+.+.
T Consensus       182 ~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        182 WPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence              134689999999999999976556899999875

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.17  E-value=0.0051  Score=63.77  Aligned_cols=140  Identities=16%  Similarity=0.161  Sum_probs=85.6

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCC--ccEEEee------eeeCCeEEEEE
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN--LVQLLGW------CHEKKELLLVY  428 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--lv~l~~~------~~~~~~~~lV~  428 (645)
                      .+.|..|....+|+....  +..+++|+....   ...+...|++++..+++.+  +.+++..      ....+..++|+
T Consensus        19 i~~i~~G~~n~~y~v~~~--~~~~vLr~~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~   93 (296)
T cd05153          19 FEGISAGIENTNYFVTTD--SGRYVLTLFEKV---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALV   93 (296)
T ss_pred             eecccCccccceEEEEeC--CCcEEEEEcCCC---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEE
Confidence            566778888899998654  346888987542   2345667888888875432  4454432      12345668999


Q ss_pred             EecCCCChhh----h----------hhh--cC--------CCCCHHHHH----------HHHHHHHHHHHHHHh----hc
Q 042831          429 EFMPNGSLDS----H----------LFK--EN--------SLLTWEFRY----------KIAQDLASGLLYLQE----EW  470 (645)
Q Consensus       429 Ey~~~gsL~~----~----------l~~--~~--------~~l~~~~~~----------~i~~~ia~gL~yLH~----~~  470 (645)
                      +|++|..+..    .          ++.  ..        ....|....          .....+...+.++..    ..
T Consensus        94 ~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~  173 (296)
T cd05153          94 EFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDL  173 (296)
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence            9999877632    0          111  00        111222111          011123334445443    22


Q ss_pred             CCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       471 ~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      ..+++|+|+.|.||+++++..+.|.||+.+.
T Consensus       174 ~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         174 PRGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             CCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence            4579999999999999998777899999875

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.05  E-value=0.0038  Score=64.93  Aligned_cols=139  Identities=24%  Similarity=0.331  Sum_probs=82.9

Q ss_pred             CccCcCCcEEEEEEEEcC------CCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCc-cEEEeeeeeCCeEEEEEEe
Q 042831          358 QKLGQGGFGGVYKGFFRE------TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL-VQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nl-v~l~~~~~~~~~~~lV~Ey  430 (645)
                      +.|..|-...+|+....+      .++.+++|...... ....+..+|.+++..+....+ .++++.+..    .+|+||
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~   78 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEF   78 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhe
Confidence            456667777899887653      25678899875543 223455678888888864333 355555532    358999


Q ss_pred             cCCCChhhh-----------------hhhcC-C-------CCC--HHHHHH--------------------------HHH
Q 042831          431 MPNGSLDSH-----------------LFKEN-S-------LLT--WEFRYK--------------------------IAQ  457 (645)
Q Consensus       431 ~~~gsL~~~-----------------l~~~~-~-------~l~--~~~~~~--------------------------i~~  457 (645)
                      ++|..+...                 +++.. .       ..+  |.....                          +..
T Consensus        79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (302)
T cd05156          79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE  158 (302)
T ss_pred             eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence            988776431                 11100 0       000  111111                          111


Q ss_pred             HHHHHHHHHHh------hcCCCeeeccCCCCCeEECCC----CcEEEeeccCcc
Q 042831          458 DLASGLLYLQE------EWEQCVVHRDIKSSNIMLDSN----FNAKIGDFGLAR  501 (645)
Q Consensus       458 ~ia~gL~yLH~------~~~~~ivH~Dlkp~NILld~~----~~~kl~DfGla~  501 (645)
                      .+..-+.+|..      .....++|+|+.+.||+++++    +.++++||..+.
T Consensus       159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            22222334432      134679999999999999975    889999999875

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=96.74  E-value=0.032  Score=58.20  Aligned_cols=141  Identities=16%  Similarity=0.194  Sum_probs=82.9

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCC--ccEEEeee------eeCCeEEEEE
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN--LVQLLGWC------HEKKELLLVY  428 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--lv~l~~~~------~~~~~~~lV~  428 (645)
                      .+.++.|....+|+.... ++ .+++|.......  ..+...|++++..|....  +.+++...      ...+..++++
T Consensus        27 i~~~~~G~~n~~y~v~t~-~~-~~vLK~~~~~~~--~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~  102 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTTD-VG-RYILTLYEKRVK--AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLV  102 (307)
T ss_pred             ccccCCccccceEEEEeC-CC-cEEEEEecCCCC--HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEE
Confidence            556777777899988653 34 577887654321  234456777777774322  34444322      2245678999


Q ss_pred             EecCCCChhhh--------------hhhcCC-----------CCCHHHHH------------HHHHHHHHHHHHHHh---
Q 042831          429 EFMPNGSLDSH--------------LFKENS-----------LLTWEFRY------------KIAQDLASGLLYLQE---  468 (645)
Q Consensus       429 Ey~~~gsL~~~--------------l~~~~~-----------~l~~~~~~------------~i~~~ia~gL~yLH~---  468 (645)
                      ||++|..+...              ++....           .-.|....            .....+.+.+.++..   
T Consensus       103 e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~  182 (307)
T TIGR00938       103 EFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWP  182 (307)
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhh
Confidence            99988654210              111000           01121110            011123334555543   


Q ss_pred             -hcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          469 -EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       469 -~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                       ....+++|+|+.+.||++++++...|.||+.+.
T Consensus       183 ~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       183 RDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             hcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence             235789999999999999988777899999874

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PLN02236 choline kinase

Probab=96.50  E-value=0.022  Score=60.49  Aligned_cols=140  Identities=18%  Similarity=0.236  Sum_probs=82.0

Q ss_pred             CccCcCCcEEEEEEEEcC----CCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCcc-EEEeeeeeCCeEEEEEEecC
Q 042831          358 QKLGQGGFGGVYKGFFRE----TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLV-QLLGWCHEKKELLLVYEFMP  432 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~----~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv-~l~~~~~~~~~~~lV~Ey~~  432 (645)
                      +.|-.|-.-.+|+....+    .++.+.+|......... -+-.+|..++..+...++. ++++.+.. +   .|+||++
T Consensus        42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~-idR~~E~~~~~~l~~~gl~P~~~~~~~~-g---~v~efi~  116 (344)
T PLN02236         42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELF-FDRDDEIRTFECMSRHGQGPRLLGRFPN-G---RVEEFIH  116 (344)
T ss_pred             EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCee-echHHHHHHHHHHHHcCCCCceEEEECC-c---eEEEeeC
Confidence            345557778899887542    23678889876543322 2236788888888654444 45555533 2   5899998


Q ss_pred             CCChhhh-----------------hhhcC---C--CCCHHHHHHHHHHH-----------------HHHHHHHHh-----
Q 042831          433 NGSLDSH-----------------LFKEN---S--LLTWEFRYKIAQDL-----------------ASGLLYLQE-----  468 (645)
Q Consensus       433 ~gsL~~~-----------------l~~~~---~--~l~~~~~~~i~~~i-----------------a~gL~yLH~-----  468 (645)
                      +.+|...                 +|+..   .  ...|....++..++                 ...+..|..     
T Consensus       117 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~  196 (344)
T PLN02236        117 ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGD  196 (344)
T ss_pred             CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhccc
Confidence            7776421                 11111   0  11233332332211                 111222221     


Q ss_pred             hcCCCeeeccCCCCCeEECC-CCcEEEeeccCccc
Q 042831          469 EWEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLARL  502 (645)
Q Consensus       469 ~~~~~ivH~Dlkp~NILld~-~~~~kl~DfGla~~  502 (645)
                      .....++|+|+++.|||+++ ++.+.+.||..+..
T Consensus       197 ~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        197 DQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             CCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence            12347899999999999986 46899999988753

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=96.43  E-value=0.0029  Score=64.62  Aligned_cols=138  Identities=16%  Similarity=0.134  Sum_probs=90.4

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---------Ch-----------h--hHHHHHHHHHHHHhcCC-C
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---------SK-----------Q--GIKEYASEVKIISRLRH-R  409 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---------~~-----------~--~~~~~~~Ei~~l~~l~H-~  409 (645)
                      -++.+++||-|--+-||.+.+.+ |.+.++|.=+..         .+           .  ..-...+|...|+.|.. .
T Consensus        93 v~svGnqIGVGKESDIY~v~d~~-G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g  171 (465)
T KOG2268|consen   93 VESVGNQIGVGKESDIYVVADEE-GNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG  171 (465)
T ss_pred             hhhhccccccccccceEEEecCC-CCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence            46778999999999999998865 677888832110         00           0  01224468888888753 2


Q ss_pred             -CccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC
Q 042831          410 -NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS  488 (645)
Q Consensus       410 -nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~  488 (645)
                       -+.+.++++    .-|+|||++.+-.|...-    ...+.++++.-+.++   +--|..   .|+||+|..-=||++++
T Consensus       172 fpVPkpiD~~----RH~Vvmelv~g~Pl~~v~----~v~d~~~ly~~lm~~---Iv~la~---~GlIHgDFNEFNimv~d  237 (465)
T KOG2268|consen  172 FPVPKPIDHN----RHCVVMELVDGYPLRQVR----HVEDPPTLYDDLMGL---IVRLAN---HGLIHGDFNEFNIMVKD  237 (465)
T ss_pred             CCCCCccccc----ceeeHHHhhcccceeeee----ecCChHHHHHHHHHH---HHHHHH---cCceecccchheeEEec
Confidence             244444443    458999999887765432    123344444333333   233333   89999999999999999


Q ss_pred             CCcEEEeeccCcccccc
Q 042831          489 NFNAKIGDFGLARLVEH  505 (645)
Q Consensus       489 ~~~~kl~DfGla~~~~~  505 (645)
                      ++.++++||-......+
T Consensus       238 d~~i~vIDFPQmvS~sh  254 (465)
T KOG2268|consen  238 DDKIVVIDFPQMVSTSH  254 (465)
T ss_pred             CCCEEEeechHhhccCC
Confidence            99999999976554433

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=96.40  E-value=0.036  Score=56.91  Aligned_cols=31  Identities=23%  Similarity=0.475  Sum_probs=25.8

Q ss_pred             CCeeeccCCCCCeEECCCCc-EEEeeccCccc
Q 042831          472 QCVVHRDIKSSNIMLDSNFN-AKIGDFGLARL  502 (645)
Q Consensus       472 ~~ivH~Dlkp~NILld~~~~-~kl~DfGla~~  502 (645)
                      ..++|+|+++.|||+++++. .-|.||+.+..
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            45899999999999997555 56999998864

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=96.39  E-value=0.00054  Score=81.60  Aligned_cols=160  Identities=16%  Similarity=0.014  Sum_probs=113.1

Q ss_pred             HHHHHHHHHHHhcCCCCccEEEeeee--eCCeEEEEEEecCCCChhhhhhhcC---CCCCHHHHHHHHHHHHHHHHHHHh
Q 042831          394 KEYASEVKIISRLRHRNLVQLLGWCH--EKKELLLVYEFMPNGSLDSHLFKEN---SLLTWEFRYKIAQDLASGLLYLQE  468 (645)
Q Consensus       394 ~~~~~Ei~~l~~l~H~nlv~l~~~~~--~~~~~~lV~Ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gL~yLH~  468 (645)
                      +....|..-+++..|+++.....=..  +..+.+.+++|+..|.+.+.+.+..   ..++........++......-+|.
T Consensus      1274 emll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls 1353 (2724)
T KOG1826|consen 1274 EMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILS 1353 (2724)
T ss_pred             HhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhh
Confidence            34455666666678888776544332  2345688999999999999886532   233333333333333444444444


Q ss_pred             h--cCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHH
Q 042831          469 E--WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALE  546 (645)
Q Consensus       469 ~--~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~e  546 (645)
                      .  .+.-.+|+++|+-|.+++.+.++|++++|+.+...+ .........+++.|+.|+....-.++.++|+|..|+.+|+
T Consensus      1354 ~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp-~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~ 1432 (2724)
T KOG1826|consen 1354 LTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNP-VLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYL 1432 (2724)
T ss_pred             cccCCccchhhhhhhhccceecCCcccccccccccccCc-hHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            2  234478999999999999999999999999984332 2223334567888999999988899999999999999999


Q ss_pred             HHcCCCCC
Q 042831          547 IACGRKPI  554 (645)
Q Consensus       547 lltG~~pf  554 (645)
                      ..-|..+|
T Consensus      1433 rs~~n~~f 1440 (2724)
T KOG1826|consen 1433 RSDGNAYF 1440 (2724)
T ss_pred             HhcccHHH
Confidence            98888776

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=96.14  E-value=0.061  Score=56.79  Aligned_cols=74  Identities=14%  Similarity=0.171  Sum_probs=47.8

Q ss_pred             ccCcCCcEEEEEEEEcCCCeEEEEEEecc-------CChhhHHHHHHHHHHHHhcC--CCC-ccEEEeeeeeCCeEEEEE
Q 042831          359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQ-------GSKQGIKEYASEVKIISRLR--HRN-LVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       359 ~LG~G~fG~Vy~g~~~~~~~~vavK~~~~-------~~~~~~~~~~~Ei~~l~~l~--H~n-lv~l~~~~~~~~~~~lV~  428 (645)
                      .||.|....||++...++++.|+||.-..       .-+-...+..-|.+.|....  -|. +.+++.  .+++...+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--EccccceehH
Confidence            57999999999999865446899996321       11223445556777776653  343 444433  3455567999


Q ss_pred             EecCCC
Q 042831          429 EFMPNG  434 (645)
Q Consensus       429 Ey~~~g  434 (645)
                      |+++..
T Consensus        80 EdL~~~   85 (370)
T TIGR01767        80 EDLSHH   85 (370)
T ss_pred             hhCccc
Confidence            998654

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.00  E-value=0.099  Score=54.42  Aligned_cols=130  Identities=19%  Similarity=0.231  Sum_probs=79.2

Q ss_pred             EEEEEEEcCCCeEEEEEEec-cCChhhHHHHHHHHHHHHhcCC--CCccEEEeeeeeCC--eEEEEEEecCCCChhhhhh
Q 042831          367 GVYKGFFRETNSYIAVKRVS-QGSKQGIKEYASEVKIISRLRH--RNLVQLLGWCHEKK--ELLLVYEFMPNGSLDSHLF  441 (645)
Q Consensus       367 ~Vy~g~~~~~~~~vavK~~~-~~~~~~~~~~~~Ei~~l~~l~H--~nlv~l~~~~~~~~--~~~lV~Ey~~~gsL~~~l~  441 (645)
                      .+|+....  ++.+++.+-. ...........+|..+|+.+.-  --+...+++|.++.  ..+.||+|+++..+.+.+.
T Consensus        40 ~t~~~~~~--~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~  117 (321)
T COG3173          40 DTFRLGDT--GQKYVLRKPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALP  117 (321)
T ss_pred             ceEEEecC--CceEEEecCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCC
Confidence            34444333  5667777221 1223344556678888887742  34456677787766  6799999998854443332


Q ss_pred             hcCCCCCHHHHHHHH-HHHHHHHHHHH--------------------------------------------------hh-
Q 042831          442 KENSLLTWEFRYKIA-QDLASGLLYLQ--------------------------------------------------EE-  469 (645)
Q Consensus       442 ~~~~~l~~~~~~~i~-~~ia~gL~yLH--------------------------------------------------~~-  469 (645)
                      ....    .  .+++ ..+++.|.-||                                                  .. 
T Consensus       118 ~~~~----~--~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~  191 (321)
T COG3173         118 PESL----G--RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANR  191 (321)
T ss_pred             cccc----h--HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcC
Confidence            1100    0  0111 23444444444                                                  21 


Q ss_pred             ----cCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          470 ----WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       470 ----~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                          ....++|+|+.+.|++++.+..+=+.||+++..-+
T Consensus       192 p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD  230 (321)
T COG3173         192 PPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGD  230 (321)
T ss_pred             CCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence                13469999999999999988889999999987544

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.99  E-value=0.043  Score=56.57  Aligned_cols=75  Identities=17%  Similarity=0.293  Sum_probs=48.7

Q ss_pred             CCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC---CCCccEEEeeeeeCCeEEEEEEec
Q 042831          355 NDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR---HRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       355 ~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~---H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      +..+.++.|....+|+..  .+++.+-||.-.   ......|..|.+-|+.|.   --.+.+.+++....+..+||+||+
T Consensus        20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l   94 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL   94 (288)
T ss_dssp             -EEEEE--SSSSEEEEEE--TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred             eeeEecCCCChhheEEEE--CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence            345678889999999987  457789999765   333457888999888884   345778899888777779999999


Q ss_pred             CCC
Q 042831          432 PNG  434 (645)
Q Consensus       432 ~~g  434 (645)
                      +.+
T Consensus        95 ~~~   97 (288)
T PF03881_consen   95 EMG   97 (288)
T ss_dssp             ---
T ss_pred             cCC
Confidence            877

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=95.73  E-value=0.0097  Score=64.31  Aligned_cols=165  Identities=24%  Similarity=0.302  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHhcCCCCccEEEeeeeeCC-eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCC
Q 042831          394 KEYASEVKIISRLRHRNLVQLLGWCHEKK-ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ  472 (645)
Q Consensus       394 ~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~  472 (645)
                      .+......+++.+.|+|+..++++..... ...+|+|++ +-||++.+..+.  +-..          +++       .+
T Consensus        27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~--l~~~----------s~~-------~~   86 (725)
T KOG1093|consen   27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGN--LKDE----------SLL-------AH   86 (725)
T ss_pred             HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhcc--cchh----------hhc-------cc
Confidence            45566778889999999999998876543 468889998 778888875432  1111          011       12


Q ss_pred             CeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCC
Q 042831          473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRK  552 (645)
Q Consensus       473 ~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~  552 (645)
                      ++.|-     |+       .+++| -++   ..              |  |-     ...+|+|||++|.++.|+.-|..
T Consensus        87 ~~~~~-----~~-------~~~td-~~~---t~--------------~--~~-----~~~pKsdVwsl~~i~~el~L~~~  129 (725)
T KOG1093|consen   87 GVLHL-----NI-------IYITD-HFL---TK--------------Y--PS-----PIGPKSDVWSLGFIILELYLGIS  129 (725)
T ss_pred             cccee-----hh-------hhccc-ccc---cc--------------C--CC-----CCCcchhhhhHHHHHHHHHHhhH
Confidence            33332     22       22233 000   00              0  10     11249999999999999999886


Q ss_pred             CCCCCCCCCchhHHHHHHHHhc-CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 042831          553 PINPKAPQGQVSLLQWVWDLYG-NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIH  621 (645)
Q Consensus       553 pf~~~~~~~~~~l~~~~~~~~~-~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  621 (645)
                      .+......+....+   ..++. .+.........   .+..+.-++++++...|+-..|..||...+..+
T Consensus       130 l~~~~~~s~~l~~i---~k~~~~d~~~~~~a~e~---~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k  193 (725)
T KOG1093|consen  130 LEAELTESEYLEIL---LKYYTDDQELLSTAMEH---LIQLLADKKRLPLLKKCLWLEPIIRPLPMELSK  193 (725)
T ss_pred             HHHHHHHHHHHHHH---HHhccCchhHHHHHHHH---HHHHhhhHhHHHHhccCCccccccccchhHHhc
Confidence            65433222111111   11111 01110000000   111223356778888999999998886555444

>PLN02756 S-methyl-5-thioribose kinase

Probab=95.66  E-value=0.15  Score=54.81  Aligned_cols=73  Identities=10%  Similarity=0.103  Sum_probs=49.8

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccC----Ch---hhHHHHHHHHHHHHhcC---CCCccEEEeeeeeCCeEEE
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG----SK---QGIKEYASEVKIISRLR---HRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~----~~---~~~~~~~~Ei~~l~~l~---H~nlv~l~~~~~~~~~~~l  426 (645)
                      .+.||.|....||+....  +..++||+-...    +.   -...+-..|.+.|..+.   ..++.+++.+|.+  ..++
T Consensus        37 ~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded--~~vl  112 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT--MALI  112 (418)
T ss_pred             EEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC--CCEE
Confidence            567899999999998763  456889975411    11   12333445566666554   3478889998873  4578


Q ss_pred             EEEecCC
Q 042831          427 VYEFMPN  433 (645)
Q Consensus       427 V~Ey~~~  433 (645)
                      +|||+++
T Consensus       113 vME~L~~  119 (418)
T PLN02756        113 GMRYLEP  119 (418)
T ss_pred             EEeecCC
Confidence            8999976

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=95.35  E-value=0.051  Score=53.30  Aligned_cols=31  Identities=26%  Similarity=0.446  Sum_probs=22.1

Q ss_pred             CCeeeccCCCCCeEE-CCCCcEEEeeccCccc
Q 042831          472 QCVVHRDIKSSNIML-DSNFNAKIGDFGLARL  502 (645)
Q Consensus       472 ~~ivH~Dlkp~NILl-d~~~~~kl~DfGla~~  502 (645)
                      ..++|+|+.+.|||+ +.++.++++||..+..
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            468999999999999 8899999999998853

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=95.27  E-value=0.11  Score=54.93  Aligned_cols=140  Identities=18%  Similarity=0.243  Sum_probs=80.2

Q ss_pred             CccCcCCcEEEEEEEEcCC---CeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCcc-EEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRET---NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLV-QLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~---~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv-~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      +.|..|=.-.+|+....+.   +..|.+|........ .-+-.+|..++..+..-++. ++++++. .+   +|.+|+++
T Consensus        20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~-~IdR~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~~fi~g   94 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDY-VIDRERELQAIKYLSAAGFGAKLLGVFG-NG---MIQSFINA   94 (330)
T ss_pred             EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCe-EechHHHHHHHHHHHhcCCCCceeEEeC-Cc---EeehhhcC
Confidence            4455566778898876432   237888887554332 22335788888888755553 5555553 22   58999977


Q ss_pred             CChhhh-------h----------hhcC---C--CCCHHHHHHHHHHH----------------------HHHHHHHHhh
Q 042831          434 GSLDSH-------L----------FKEN---S--LLTWEFRYKIAQDL----------------------ASGLLYLQEE  469 (645)
Q Consensus       434 gsL~~~-------l----------~~~~---~--~l~~~~~~~i~~~i----------------------a~gL~yLH~~  469 (645)
                      .+|...       +          |...   .  .-.|....++..++                      ..-+..+...
T Consensus        95 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~  174 (330)
T PLN02421         95 RTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEI  174 (330)
T ss_pred             CCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHH
Confidence            665321       1          1111   0  11233332222221                      1112222211


Q ss_pred             -----cCCCeeeccCCCCCeEECC-CCcEEEeeccCccc
Q 042831          470 -----WEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLARL  502 (645)
Q Consensus       470 -----~~~~ivH~Dlkp~NILld~-~~~~kl~DfGla~~  502 (645)
                           ....++|.|+.+.|||+++ ++.++++||..|..
T Consensus       175 ~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        175 TDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             hccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence                 1235899999999999974 57899999998854

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=95.05  E-value=0.28  Score=51.39  Aligned_cols=143  Identities=17%  Similarity=0.145  Sum_probs=91.4

Q ss_pred             CCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-----C--------------------hhhH-HHHHHHHHHHHhcCCC
Q 042831          356 DDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-----S--------------------KQGI-KEYASEVKIISRLRHR  409 (645)
Q Consensus       356 ~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-----~--------------------~~~~-~~~~~Ei~~l~~l~H~  409 (645)
                      +...|..|--..||.+.-.+ |..+|||+++..     .                    +.-. -....|+.-|.+|+.-
T Consensus       148 inGCiSTGKEANVYHat~~d-G~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a  226 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATEED-GSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA  226 (520)
T ss_pred             cccccccCccceeEeeecCC-CceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            45567889999999998755 777999987421     0                    0001 1233577777777644


Q ss_pred             CccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC
Q 042831          410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN  489 (645)
Q Consensus       410 nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~  489 (645)
                      .|..---...  ..-.|||+|+.......-. -..-.++.......-+|++.-+.-|-+.  .++||.||.--|+|+- +
T Consensus       227 GIP~PePIlL--k~hVLVM~FlGrdgw~aPk-LKd~~ls~~ka~~~Y~~~v~~MR~lY~~--c~LVHADLSEfN~Lyh-d  300 (520)
T KOG2270|consen  227 GIPCPEPILL--KNHVLVMEFLGRDGWAAPK-LKDASLSTSKARELYQQCVRIMRRLYQK--CRLVHADLSEFNLLYH-D  300 (520)
T ss_pred             CCCCCCceee--ecceEeeeeccCCCCcCcc-cccccCChHHHHHHHHHHHHHHHHHHHH--hceeccchhhhhheEE-C
Confidence            4321100011  1237999999633221111 1233466666777778888888888774  5699999999999884 5


Q ss_pred             CcEEEeeccCcccccc
Q 042831          490 FNAKIGDFGLARLVEH  505 (645)
Q Consensus       490 ~~~kl~DfGla~~~~~  505 (645)
                      |.+.|+|-+.+...++
T Consensus       301 G~lyiIDVSQSVE~DH  316 (520)
T KOG2270|consen  301 GKLYIIDVSQSVEHDH  316 (520)
T ss_pred             CEEEEEEccccccCCC
Confidence            6899999988765544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	645
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-42
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-41
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-40
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-40
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		8e-37
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		8e-37
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-36
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		1e-33
2bqp_A	234	The Structure Of The Pea Lectin-D-Glucopyranose Com		2e-27
2eig_A	234	Lotus Tetragonolobus Seed Lectin (Isoform) Length =		1e-25
3zvx_A	261	Structure Of The Lectin From Platypodium Elegans In		1e-25
1qnw_A	242	Lectin Ii From Ulex Europaeus Length = 242		4e-25
1fny_A	237	Legume Lectin Of The Bark Of Robinia Pseudoacacia.		4e-25
1wbl_A	241	Winged Bean Lectin Complexed With Methyl-Alpha-D-Ga		2e-24
1wbf_A	242	Winged Bean Lectin, Saccharide Free Form Length = 2		2e-24
2e7q_A	237	Crystal Structure Of Basic Winged Bean Lectin In Co		4e-24
2sba_A	253	Soybean Agglutinin Complexed With 2,6-Pentasacchari		1e-23
1n47_A	233	Isolectin B4 From Vicia Villosa In Complex With The		4e-23
1fat_A	252	Phytohemagglutinin-L Length = 252		2e-22
1lul_A	253	Db58, A Legume Lectin From Dolichos Biflorus Length		2e-22
3ujo_A	281	Galactose-Specific Seed Lectin From Dolichos Lablab		2e-22
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-22
2pel_A	236	Peanut Lectin Length = 236		6e-22
1bjq_A	253	The Dolichos Biflorus Seed Lectin In Complex With A		6e-22
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		7e-22
1bzw_A	232	Peanut Lectin Complexed With C-Lactose Length = 232		7e-22
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-22
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-22
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		8e-22
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		8e-22
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		9e-22
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		9e-22
3usu_B	242	Crystal Structure Of Butea Monosperma Seed Lectin L		9e-22
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		9e-22
3usu_A	256	Crystal Structure Of Butea Monosperma Seed Lectin L		1e-21
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		1e-21
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		1e-21
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		2e-21
1g8w_A	233	Improved Structure Of Phytohemagglutinin-L From The		2e-21
3ipv_A	251	Crystal Structure Of Spatholobus Parviflorus Seed L		2e-21
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-21
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-21
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-21
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-21
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		3e-21
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		3e-21
3ipv_B	239	Crystal Structure Of Spatholobus Parviflorus Seed L		3e-21
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		3e-21
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		3e-21
1dbn_A	239	Maackia Amurensis Leukoagglutinin (Lectin) With Sia		6e-21
1n3o_A	252	Pterocarcpus Angolensis Lectin In Complex With Alph		6e-21
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		7e-21
1q8o_A	252	Pterocartpus Angolensis Lectin Pal In Complex With		7e-21
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		9e-21
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		9e-21
2fmd_A	240	Structural Basis Of Carbohydrate Recognition By Bow		1e-20
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-20
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		2e-20
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		2e-20
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		2e-20
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		2e-20
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		2e-20
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		2e-20
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		3e-20
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		3e-20
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		3e-20
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		3e-20
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		4e-20
1loa_A	181	Three-Dimensional Structures Of Complexes Of Lathyr		4e-20
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		4e-20
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		4e-20
1lof_C	181	X-Ray Structure Of A Biantennary Octasaccharide-Lec		4e-20
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		5e-20
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		6e-20
1lgb_A	181	Interaction Of A Legume Lectin With The N2 Fragment		7e-20
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		8e-20
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		8e-20
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		9e-20
1lgc_A	181	Interaction Of A Legume Lectin With The N2 Fragment		9e-20
2lal_A	181	Crystal Structure Determination And Refinement At 2		1e-19
1fay_A	238	Winged Bean Acidic Lectin Complexed With Methyl-Alp		1e-19
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		1e-19
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		1e-19
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		2e-19
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		2e-19
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		3e-19
1fx5_A	242	Crystal Structure Analysis Of Ulex Europaeus Lectin		3e-19
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		3e-19
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		3e-19
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		4e-19
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		4e-19
1ofs_A	187	Pea Lectin-sucrose Complex Length = 187		4e-19
1rin_A	180	X-Ray Crystal Structure Of A Pea Lectin-Trimannosid		6e-19
2ltn_A	181	Design, Expression, And Crystallization Of Recombin		6e-19
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		6e-19
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		9e-19
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		1e-18
1fyu_A	255	Crystal Structure Of Erythrina Corallodendron Lecti		1e-18
3n35_A	242	Erythrina Corallodendron Lectin Mutant (Y106g) With		1e-18
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		2e-18
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-18
4h58_A	275	Braf In Complex With Compound 3 Length = 275		3e-18
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		3e-18
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		3e-18
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		3e-18
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		3e-18
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		3e-18
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		3e-18
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		4e-18
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		4e-18
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		4e-18
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-18
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		4e-18
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		5e-18
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		5e-18
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		5e-18
2b7y_A	182	Fava Bean Lectin-Glucose Complex Length = 182		5e-18
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		5e-18
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		5e-18
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		5e-18
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		6e-18
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		6e-18
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		6e-18
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		6e-18
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		6e-18
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		7e-18
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		7e-18
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		7e-18
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		7e-18
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		7e-18
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		8e-18
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		8e-18
2pl0_A	289	Lck Bound To Imatinib Length = 289		8e-18
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		8e-18
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		8e-18
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		9e-18
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		9e-18
1uzy_A	242	Erythrina Crystagalli Lectin Length = 242		9e-18
1gz9_A	239	High-Resolution Crystal Structure Of Erythrina Cris		9e-18
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		1e-17
1gnz_A	257	Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)m		1e-17
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		1e-17
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		1e-17
1hql_A	257	The Xenograft Antigen In Complex With The B4 Isolec		1e-17
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		1e-17
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		1e-17
1ax0_A	239	Erythrina Corallodendron Lectin In Complex With N-A		1e-17
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-17
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		2e-17
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		2e-17
1sfy_A	239	Crystal Structure Of Recombinant Erythrina Corallod		2e-17
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-17
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-17
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		2e-17
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		2e-17
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		2e-17
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		3e-17
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		3e-17
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		3e-17
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		3e-17
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		4e-17
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		4e-17
1lte_A	239	Structure Of A Legume Lectin With An Ordered N-Link		4e-17
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		4e-17
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		4e-17
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		5e-17
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		5e-17
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		5e-17
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		5e-17
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		5e-17
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		5e-17
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		5e-17
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		6e-17
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-17
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		6e-17
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		6e-17
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		8e-17
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		8e-17
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		8e-17
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		8e-17
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		8e-17
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		1e-16
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		1e-16
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		1e-16
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-16
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-16
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-16
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-16
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-16
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-16
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-16
1gsl_A	243	Lectin (Fourth Isolated From (Griffonia Simplicifol		1e-16
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-16
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		1e-16
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-16
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-16
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-16
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-16
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-16
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-16
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		2e-16
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-16
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-16
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-16
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-16
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-16
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		2e-16
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		2e-16
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-16
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-16
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-16
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-16
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-16
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		3e-16
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		3e-16
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		3e-16
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		3e-16
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		3e-16
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		3e-16
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-16
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		4e-16
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		4e-16
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		4e-16
1fvr_A	327	Tie2 Kinase Domain Length = 327		5e-16
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		5e-16
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		5e-16
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		5e-16
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		6e-16
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		6e-16
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		6e-16
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		6e-16
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		6e-16
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		7e-16
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		7e-16
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		7e-16
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		7e-16
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		7e-16
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		7e-16
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		8e-16
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		8e-16
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		8e-16
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		9e-16
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		9e-16
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		9e-16
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		1e-15
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		1e-15
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		1e-15
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		1e-15
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-15
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		1e-15
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-15
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		1e-15
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		1e-15
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-15
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		2e-15
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-15
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		2e-15
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		2e-15
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		2e-15
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-15
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-15
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-15
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		2e-15
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		3e-15
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-15
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		3e-15
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		3e-15
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		3e-15
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		3e-15
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		3e-15
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		3e-15
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		4e-15
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		4e-15
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		5e-15
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		5e-15
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		5e-15
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		5e-15
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		5e-15
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		5e-15
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-15
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-15
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		7e-15
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		7e-15
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		8e-15
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		8e-15
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		8e-15
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		9e-15
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		9e-15
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		9e-15
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		1e-14
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		1e-14
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-14
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		1e-14
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		1e-14
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-14
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		2e-14
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		2e-14
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		2e-14
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		2e-14
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		2e-14
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		3e-14
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		3e-14
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		3e-14
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		3e-14
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		3e-14
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		3e-14
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		3e-14
3a4o_X	286	Lyn Kinase Domain Length = 286		4e-14
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		4e-14
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		4e-14
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		4e-14
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		4e-14
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		4e-14
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		4e-14
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		5e-14
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		5e-14
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		5e-14
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		5e-14
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		5e-14
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		5e-14
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		5e-14
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		5e-14
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		6e-14
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		6e-14
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		6e-14
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		6e-14
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		6e-14
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		6e-14
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		6e-14
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		6e-14
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		6e-14
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		6e-14
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		7e-14
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		7e-14
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		7e-14
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		7e-14
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		7e-14
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		7e-14
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		7e-14
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		8e-14
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		8e-14
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		9e-14
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		1e-13
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		1e-13
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		1e-13
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		2e-13
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		2e-13
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		2e-13
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		2e-13
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-13
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		2e-13
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		2e-13
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		2e-13
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		2e-13
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		2e-13
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-13
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-13
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-13
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		3e-13
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		3e-13
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		3e-13
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		3e-13
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		3e-13
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		3e-13
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		3e-13
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		3e-13
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		3e-13
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		3e-13
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		4e-13
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		4e-13
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		4e-13
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		4e-13
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		5e-13
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		6e-13
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		7e-13
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		7e-13
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		7e-13
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		7e-13
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		7e-13
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		7e-13
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		8e-13
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		8e-13
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		9e-13
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		9e-13
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		9e-13
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		9e-13
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		9e-13
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		9e-13
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		9e-13
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		9e-13
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		1e-12
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		1e-12
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-12
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		1e-12
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		1e-12
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		1e-12
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		1e-12
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-12
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-12
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-12
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-12
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-12
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-12
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		1e-12
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-12
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-12
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-12
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-12
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-12
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-12
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-12
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		1e-12
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-12
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		1e-12
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		2e-12
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		2e-12
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-12
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-12
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		2e-12
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		2e-12
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		2e-12
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		2e-12
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-12
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-12
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		2e-12
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-12
3b2t_A	311	Structure Of Phosphotransferase Length = 311		2e-12
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		2e-12
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		2e-12
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		2e-12
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		3e-12
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		3e-12
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		3e-12
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-12
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		3e-12
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		3e-12
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		3e-12
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		3e-12
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		3e-12
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		3e-12
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		3e-12
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-12
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		3e-12
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		3e-12
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		3e-12
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		3e-12
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		3e-12
4fl3_A	635	Structural And Biophysical Characterization Of The		3e-12
4fl2_A	636	Structural And Biophysical Characterization Of The		3e-12
3g51_A	325	Structural Diversity Of The Active Conformation Of		3e-12
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		3e-12
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		4e-12
4fie_A	423	Full-Length Human Pak4 Length = 423		4e-12
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		4e-12
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		4e-12
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		4e-12
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		5e-12
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		5e-12
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		5e-12
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		5e-12
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-12
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		5e-12
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		5e-12
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		5e-12
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		5e-12
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		5e-12
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		5e-12
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		6e-12
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		6e-12
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		7e-12
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		7e-12
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-12
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		8e-12
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		8e-12
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		9e-12
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		9e-12
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		1e-11
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		1e-11
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		1e-11
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		1e-11
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		1e-11
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		1e-11
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		1e-11
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		1e-11
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-11
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		1e-11
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-11
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		1e-11
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		1e-11
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		1e-11
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		1e-11
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		2e-11
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-11
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-11
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		2e-11
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-11
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-11
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-11
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		2e-11
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-11
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		2e-11
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-11
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		2e-11
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-11
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-11
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-11
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-11
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		2e-11
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-11
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		2e-11
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-11
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		2e-11
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-11
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-11
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		3e-11
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		3e-11
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		3e-11
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		3e-11
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		3e-11
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		3e-11
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		3e-11
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		3e-11
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		3e-11
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		3e-11
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		3e-11
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		3e-11
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		3e-11
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		3e-11
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		3e-11
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-11
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		3e-11
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		3e-11
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		3e-11
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		3e-11
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		4e-11
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		4e-11
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		4e-11
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		4e-11
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		4e-11
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		4e-11
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-11
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		4e-11
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		4e-11
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		4e-11
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		4e-11
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		4e-11
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		4e-11
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		4e-11
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		4e-11
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		4e-11
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		5e-11
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		5e-11
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		5e-11
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		5e-11
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		5e-11
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		5e-11
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		5e-11
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		5e-11
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		5e-11
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		5e-11
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		6e-11
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		6e-11
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		6e-11
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		6e-11
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		7e-11
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		7e-11
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		7e-11
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-11
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		7e-11
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		7e-11
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		8e-11
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		8e-11
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		8e-11
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		8e-11
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		8e-11
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		8e-11
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		8e-11
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		8e-11
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		8e-11
4ae9_A	343	Structure And Function Of The Human Sperm-specific		8e-11
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		9e-11
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		9e-11
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		9e-11
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		9e-11
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		9e-11
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		1e-10
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-10
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-10
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		1e-10
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		1e-10
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		1e-10
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-10
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		1e-10
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		1e-10
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		1e-10
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-10
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		1e-10
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		1e-10
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		1e-10
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		1e-10
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		1e-10
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		1e-10
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		1e-10
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		1e-10
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-10
4ae6_A	343	Structure And Function Of The Human Sperm-specific		1e-10
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		1e-10
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-10
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-10
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		2e-10
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		2e-10
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-10
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		2e-10
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		2e-10
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-10
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-10
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-10
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-10
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		2e-10
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		2e-10
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		2e-10
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-10
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		2e-10
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		2e-10
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-10
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		2e-10
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-10
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-10
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-10
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		2e-10
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-10
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		2e-10
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		2e-10
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		3e-10
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		3e-10
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		3e-10
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		3e-10
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		3e-10
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		3e-10
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		3e-10
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		3e-10
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-10
3a7f_A	303	Human Mst3 Kinase Length = 303		3e-10
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-10
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-10
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		3e-10
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		3e-10
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-10
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		3e-10
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		3e-10
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-10
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		3e-10
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		3e-10
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		3e-10
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		3e-10
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		4e-10
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-10
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		4e-10
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		4e-10
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		4e-10
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		4e-10
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		4e-10
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		4e-10
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		4e-10
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-10
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		4e-10
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-10
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		5e-10
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		5e-10
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		5e-10
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-10
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		5e-10
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		5e-10
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		5e-10
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		5e-10
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		5e-10
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		5e-10
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		5e-10
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		5e-10
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		5e-10
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		5e-10
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		5e-10
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		5e-10
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		5e-10
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		5e-10
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		5e-10
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		5e-10
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		5e-10
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		5e-10
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		5e-10
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		5e-10
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		6e-10
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		6e-10
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		6e-10
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		6e-10
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		6e-10
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		6e-10
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		6e-10
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		6e-10
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-10
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		6e-10
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		6e-10
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		6e-10
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		6e-10
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		6e-10
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		6e-10
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		6e-10
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		6e-10
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		6e-10
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		6e-10
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		6e-10
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		6e-10
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		6e-10
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		7e-10
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		7e-10
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		7e-10
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		8e-10
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		8e-10
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		9e-10
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		1e-09
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		1e-09
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		1e-09
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		1e-09
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-09
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		1e-09
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		1e-09
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-09
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		1e-09
1h9p_A	237	Crystal Structure Of Dioclea Guianensis Seed Lectin		1e-09
3rrd_A	237	Native Structure Of Dioclea Virgata Lectin Length =		1e-09
1h9w_A	237	Native Dioclea Guianensis Seed Lectin Length = 237		2e-09
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		2e-09
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-09
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-09
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		2e-09
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-09
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		2e-09
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		2e-09
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		2e-09
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		2e-09
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		2e-09
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		2e-09
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-09
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-09
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-09
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		2e-09
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-09
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		2e-09
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		2e-09
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-09
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-09
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-09
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-09
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-09
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		2e-09
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-09
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-09
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		2e-09
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-09
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-09
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-09
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-09
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		2e-09
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		2e-09
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-09
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		2e-09
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-09
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		2e-09
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		3e-09
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		3e-09
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		3e-09
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		3e-09
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		3e-09
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		3e-09
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		3e-09
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		3e-09
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		3e-09
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		3e-09
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		3e-09
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		3e-09
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		3e-09
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		3e-09
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		3e-09
2jdz_A	239	Crystal Structure Of Recombinant Dioclea Guianensis		3e-09
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		3e-09
1qmo_E	133	Structure Of Fril, A Legume Lectin That Delays Hema		3e-09
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-09
2je7_A	239	Crystal Structure Of Recombinant Dioclea Guianensis		4e-09
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		4e-09
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		4e-09
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		4e-09
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		4e-09
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		5e-09
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		5e-09
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		5e-09
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		5e-09
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		5e-09
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		5e-09
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		5e-09
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		5e-09
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		5e-09
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		5e-09
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		5e-09
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		7e-09
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		8e-09
2zbj_A	237	Crystal Structure Of Dioclea Rostrata Lectin Length		8e-09
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		8e-09
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		8e-09
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		8e-09
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		9e-09
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		9e-09
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		9e-09
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		9e-09
1avb_A	226	Arcelin-1 From Phaseolus Vulgaris L Length = 226		1e-08
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		1e-08
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		1e-08
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		1e-08
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		1e-08
3a0k_A	237	Crystal Structure Of An Antiflamatory Legume Lectin		1e-08
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		1e-08
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		1e-08
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		1e-08
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		1e-08
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		1e-08
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-08
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		2e-08
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		2e-08
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		2e-08
3u4x_A	236	Crystal Structure Of A Lectin From Camptosema Pedic		2e-08
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		2e-08
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-08
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		2e-08
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		2e-08
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-08
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		2e-08
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		2e-08
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-08
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-08
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-08
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-08
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-08
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-08
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-08
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-08
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-08
2jec_A	239	Crystal Structure Of Recombinant Dioclea Grandiflor		2e-08
3hec_A	348	P38 In Complex With Imatinib Length = 348		2e-08
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-08
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		2e-08
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		2e-08
3kk9_A	282	Camkii Substrate Complex B Length = 282		2e-08
2gdf_A	237	Crystal Structure Of Dioclea Violacea Seed Lectin L		2e-08
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-08
3kk8_A	284	Camkii Substrate Complex A Length = 284		2e-08
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-08
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		3e-08
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		3e-08
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		3e-08
2je9_A	239	Crystal Structure Of Recombinant Dioclea Grandiflor		3e-08
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-08
3sh3_A	237	Crystal Structure Of A Pro-Inflammatory Lectin From		3e-08
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		3e-08
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		3e-08
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		3e-08
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		3e-08
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		3e-08
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		3e-08
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		3e-08
3soa_A	444	Full-Length Human Camkii Length = 444		3e-08
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		3e-08
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		3e-08
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		3e-08
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		3e-08
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		3e-08
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		3e-08
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		3e-08
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		3e-08
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		3e-08
1mvq_A	236	Cratylia Mollis Lectin (Isoform 1) In Complex With		3e-08
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		3e-08
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		3e-08
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		3e-08
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		3e-08
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		3e-08
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		3e-08
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		3e-08
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		3e-08
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		4e-08
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		4e-08
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		4e-08
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		4e-08
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		4e-08
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		4e-08
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		4e-08
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		5e-08
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		5e-08
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		5e-08
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		5e-08
2d3p_A	236	Cratylia Floribunda Seed Lectin Crystallized At Bas		5e-08
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		5e-08
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		5e-08
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		6e-08
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		6e-08
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		6e-08
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		7e-08
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		7e-08
4exu_A	371	Mapk13, Inactive Form Length = 371		7e-08
1qmo_A	113	Structure Of Fril, A Legume Lectin That Delays Hema		7e-08
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		8e-08
1cn1_A	237	Crystal Structure Of Demetallized Concanavalin A. T		9e-08
2cna_A	237	The Covalent And Three-Dimensional Structure Of Con		9e-08
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		9e-08
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		9e-08
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		1e-07
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		1e-07
1dgl_A	237	Lectin From Dioclea Grandiflora Complexed To Triman		1e-07
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		1e-07
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		1e-07
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		1e-07
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		1e-07
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		1e-07
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		1e-07
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		2e-07
1azd_A	237	Concanavalin From Canavalia Brasiliensis Length = 2		2e-07
1ioa_A	240	Arcelin-5, A Lectin-Like Defense Protein From Phase		2e-07
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		2e-07
2ctv_A	237	High Resolution Crystallographic Studies Of Native		2e-07
2ow4_A	237	Crystal Structure Of A Lectin From Canavalia Mariti		2e-07
2cwm_A	237	Native Crystal Structure Of No Releasing Inductive		2e-07
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-07
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		2e-07
1dhk_B	223	Structure Of Porcine Pancreatic Alpha-Amylase Lengt		2e-07
2yz4_A	237	The Neutron Structure Of Concanavalin A At 2.2 Angs		2e-07
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		2e-07
1wuv_A	237	Crystal Structure Of Native Canavalia Gladiata Lect		3e-07
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		3e-07
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		3e-07
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		3e-07
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-07
2ovu_A	237	Crystal Strucure Of A Lectin From Canavalia Gladiat		3e-07
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		3e-07
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		4e-07
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		4e-07
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-07
1viw_B	205	Tenebrio Molitor Alpha-Amylase-Inhibitor Complex Le		4e-07
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		5e-07
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		5e-07
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		5e-07
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		6e-07
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		6e-07
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		7e-07
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		7e-07
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		8e-07
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		9e-07
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		1e-06
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		1e-06
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		1e-06
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-06
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		1e-06
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-06
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		2e-06
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-06
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		2e-06
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-06
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		2e-06
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		2e-06
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		2e-06
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-06
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		2e-06
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		3e-06
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		3e-06
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		3e-06
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		3e-06
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		3e-06
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		3e-06
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		3e-06
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		4e-06
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		4e-06
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		4e-06
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		4e-06
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		4e-06
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		4e-06
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		5e-06
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		5e-06
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		5e-06
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		5e-06
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		5e-06
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		5e-06
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		5e-06
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		5e-06
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		5e-06
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		5e-06
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		5e-06
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		5e-06
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		5e-06
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		6e-06
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		6e-06
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		6e-06
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		6e-06
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		6e-06

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  170 bits (431), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 166/291 (57%), Gaps = 7/291 (2%)
Query: 340 KRFPYKELALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIK-EYAS 398
           KRF  +EL +A+++F++   L              +  + +AVKR+ +   QG + ++ +
Sbjct: 26  KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEERXQGGELQFQT 84
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKE---NSLLTWEFRYKI 455
           EV++IS   HRNL++L G+C    E LLVY +M NGS+ S L +       L W  R +I
Sbjct: 85  EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 456 AQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA 515
           A   A GL YL +  +  ++HRD+K++NI+LD  F A +GDFGLA+L+++        + 
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 516 GTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPK--APQGQVSLLQWVWDLY 573
           GT+G++APE  +TGK+S+++DV+ +G++ LE+  G++  +    A    V LL WV  L 
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 264
Query: 574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
              KL   VD  L  ++  +++E+L+ V L C       RP + +V+ +L 
Sbjct: 265 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  167 bits (422), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 163/291 (56%), Gaps = 7/291 (2%)
Query: 340 KRFPYKELALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIK-EYAS 398
           KRF  +EL +A+++F +   L              +    +AVKR+ +   QG + ++ +
Sbjct: 18  KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLAD-GXLVAVKRLKEERTQGGELQFQT 76
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKE---NSLLTWEFRYKI 455
           EV++IS   HRNL++L G+C    E LLVY +M NGS+ S L +       L W  R +I
Sbjct: 77  EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 456 AQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA 515
           A   A GL YL +  +  ++HRD+K++NI+LD  F A +GDFGLA+L+++        + 
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 196
Query: 516 GTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPK--APQGQVSLLQWVWDLY 573
           G +G++APE  +TGK+S+++DV+ +G++ LE+  G++  +    A    V LL WV  L 
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
              KL   VD  L  ++  +++E+L+ V L C       RP + +V+ +L 
Sbjct: 257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  164 bits (416), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 159/289 (55%), Gaps = 8/289 (2%)
Query: 341 RFPYKELALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIKEYASEV 400
           R P  +L  ATN+F D + L                 + +A+KR +  S QGI+E+ +E+
Sbjct: 28  RVPLVDLEEATNNF-DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEI 86
Query: 401 KIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKEN---SLLTWEFRYKIAQ 457
           + +S  RH +LV L+G+C E+ E++L+Y++M NG+L  HL+  +     ++WE R +I  
Sbjct: 87  ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL-VEHAKGSQTTVLAG 516
             A GL YL     + ++HRD+KS NI+LD NF  KI DFG+++   E  +     V+ G
Sbjct: 147 GAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG 576
           T+GY+ PE    G+ +++SDVYSFG+V  E+ C R  I    P+  V+L +W  + + NG
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF 625
           +L + VDP L      + + +     + C       RPS+  V+  L +
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  163 bits (413), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 159/289 (55%), Gaps = 8/289 (2%)
Query: 341 RFPYKELALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIKEYASEV 400
           R P  +L  ATN+F D + L                 + +A+KR +  S QGI+E+ +E+
Sbjct: 28  RVPLVDLEEATNNF-DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEI 86
Query: 401 KIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKEN---SLLTWEFRYKIAQ 457
           + +S  RH +LV L+G+C E+ E++L+Y++M NG+L  HL+  +     ++WE R +I  
Sbjct: 87  ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL-VEHAKGSQTTVLAG 516
             A GL YL     + ++HRD+KS NI+LD NF  KI DFG+++   E  +     V+ G
Sbjct: 147 GAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKG 203
Query: 517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG 576
           T+GY+ PE    G+ +++SDVYSFG+V  E+ C R  I    P+  V+L +W  + + NG
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF 625
           +L + VDP L      + + +     + C       RPS+  V+  L +
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  151 bits (382), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 95/256 (37%), Positives = 146/256 (57%), Gaps = 17/256 (6%)
Query: 377 NSYIAVKRVSQ----GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           N+ +AVK+++      +++  +++  E+K++++ +H NLV+LLG+  +  +L LVY +MP
Sbjct: 54  NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMP 113
Query: 433 NGSLDSHL--FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           NGSL   L        L+W  R KIAQ  A+G+ +L E      +HRDIKS+NI+LD  F
Sbjct: 114 NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAF 170
Query: 491 NAKIGDFGLARLVEHAKGSQTTV---LAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
            AKI DFGLAR  E  K +QT +   + GT  YMAPE A  G+ + +SD+YSFG+V LEI
Sbjct: 171 TAKISDFGLARASE--KFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEI 227
Query: 548 ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAH 607
             G  P   +  + Q+ L            + + +D ++  D D   +E +  V   C H
Sbjct: 228 ITGL-PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLH 285
Query: 608 PDENLRPSIRQVIHVL 623
             +N RP I++V  +L
Sbjct: 286 EKKNKRPDIKKVQQLL 301

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  151 bits (382), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 95/256 (37%), Positives = 146/256 (57%), Gaps = 17/256 (6%)
Query: 377 NSYIAVKRVSQ----GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           N+ +AVK+++      +++  +++  E+K++++ +H NLV+LLG+  +  +L LVY +MP
Sbjct: 54  NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMP 113
Query: 433 NGSLDSHL--FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           NGSL   L        L+W  R KIAQ  A+G+ +L E      +HRDIKS+NI+LD  F
Sbjct: 114 NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAF 170
Query: 491 NAKIGDFGLARLVEHAKGSQTTV---LAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
            AKI DFGLAR  E  K +QT +   + GT  YMAPE A  G+ + +SD+YSFG+V LEI
Sbjct: 171 TAKISDFGLARASE--KFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEI 227
Query: 548 ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAH 607
             G  P   +  + Q+ L            + + +D ++  D D   +E +  V   C H
Sbjct: 228 ITGL-PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLH 285
Query: 608 PDENLRPSIRQVIHVL 623
             +N RP I++V  +L
Sbjct: 286 EKKNKRPDIKKVQQLL 301

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  150 bits (380), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/254 (36%), Positives = 143/254 (56%), Gaps = 13/254 (5%)
Query: 377 NSYIAVKRVSQ----GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           N+ +AVK+++      +++  +++  E+K++++ +H NLV+LLG+  +  +L LVY +MP
Sbjct: 48  NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMP 107
Query: 433 NGSLDSHL--FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           NGSL   L        L+W  R KIAQ  A+G+ +L E      +HRDIKS+NI+LD  F
Sbjct: 108 NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAF 164
Query: 491 NAKIGDFGLARLVEH-AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
            AKI DFGLAR  E  A+      + GT  YMAPE A  G+ + +SD+YSFG+V LEI  
Sbjct: 165 TAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 223
Query: 550 GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPD 609
           G  P   +  + Q+ L            + + +D ++  D D   +E +  V   C H  
Sbjct: 224 GL-PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEK 281
Query: 610 ENLRPSIRQVIHVL 623
           +N RP I++V  +L
Sbjct: 282 KNKRPDIKKVQQLL 295

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score =  141 bits (355), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 139/254 (54%), Gaps = 13/254 (5%)
Query: 377 NSYIAVKRVSQ----GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           N+ +AVK+++      +++  +++  E+K+ ++ +H NLV+LLG+  +  +L LVY + P
Sbjct: 45  NTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXP 104
Query: 433 NGSLDSHL--FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           NGSL   L        L+W  R KIAQ  A+G+ +L E      +HRDIKS+NI+LD  F
Sbjct: 105 NGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAF 161
Query: 491 NAKIGDFGLARLVEH-AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
            AKI DFGLAR  E  A+    + + GT  Y APE A  G+ + +SD+YSFG+V LEI  
Sbjct: 162 TAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIIT 220
Query: 550 GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPD 609
           G  P   +  + Q+ L            + + +D +   D D   +E    V   C H  
Sbjct: 221 GL-PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKX-NDADSTSVEAXYSVASQCLHEK 278
Query: 610 ENLRPSIRQVIHVL 623
           +N RP I++V  +L
Sbjct: 279 KNKRPDIKKVQQLL 292

>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex Length = 234

Iteration: 1
 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/234 (34%), Positives = 120/234 (51%), Gaps = 11/234 (4%)
Query: 36  TFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFT 95
           +F  T FSP   + I     Y    ++    A + T GRA Y+  + +WD+ TGN+ +F 
Sbjct: 5   SFLITKFSPDQQNLIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANFV 64
Query: 96  THFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFD 155
           T F+FVI++ NS   ADG  FF+AP  +K  T  GGG  G+    E  + +   VAVEFD
Sbjct: 65  TSFTFVINAPNSYNVADGFTFFIAPVDTKPQT--GGGYLGVFNSAE-YDKTTQTVAVEFD 121
Query: 156 VYVN-SWDPTF--SHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNLSVAFTG 212
            + N +WDP+    H+GID+                 G      I++N++T+ L+V+ T 
Sbjct: 122 TFYNAAWDPSNRDRHIGIDV--NSIKSVNTKSWKLQNGEEANVVIAFNAATNVLTVSLTY 179
Query: 213 FRNNL---VVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSL 263
             N+L   V    L   V L+  +PE+V  GFS  TG ++A   + SW F+S L
Sbjct: 180 PNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSEL 233

>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform) Length = 234

Iteration: 1
 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 119/242 (49%), Gaps = 18/242 (7%)
Query: 35  LTFNYTSFSPQYDDNITYE---RAYPDSNRVIQL-PANRETAGRATYNQSMRLWDKATGN 90
           ++FNYT F  + D ++ ++   + + D    +   P    T   A Y   + +WD ATGN
Sbjct: 1   VSFNYTRF--KDDGSLIFQGDAKIWTDGRLAMPTDPLVNRTTSHALYATPVPIWDSATGN 58
Query: 91  LTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFV 150
           +  F T FSF++ +       DG+ FFLAP G++IP N  GG  G+T  +   NS   FV
Sbjct: 59  VASFITSFSFIVSNVQRYPPTDGVVFFLAPWGTEIPPNSQGGYLGITDSS---NSQNQFV 115
Query: 151 AVEFDVYVNSWDPT---FSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNLS 207
           AVEFD + N WDP     SH+GID+                 G   +A I Y+S T  L+
Sbjct: 116 AVEFDSHPNVWDPKSLRSSHIGIDV--NSIMSLKAVNWNRVSGSLEKATIIYDSDTKILT 173
Query: 208 VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMAT-GVDFAIFSIYSWEFNSSLEMD 266
           V  T     +     +  ++DL+  LPE V+ GFS  T   +     IYSW F S+L+  
Sbjct: 174 VVMTHQNGQITT---ISQEIDLKTVLPEKVSVGFSATTWNPERERHDIYSWSFTSTLKEP 230
Query: 267 DE 268
           +E
Sbjct: 231 EE 232

>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In Complex With A Trimannoside Length = 261

Iteration: 1
 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 119/245 (48%), Gaps = 24/245 (9%)
Query: 34  ALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPAN-------RETAGRATYNQSMRLWDK 86
           +L+F++ +F     + I    A+   N ++QL          R T GR  ++  +RLW+K
Sbjct: 11  SLSFSFINFDRDERNLIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGRILHSAQVRLWEK 70
Query: 87  ATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSS 146
           +T  + +  T FSF + S  S+  ADG+AFF+AP  + IP+   GG  GL      LN S
Sbjct: 71  STNRVANLQTQFSFFLSSPLSNP-ADGIAFFIAPPDTTIPSGSAGGLLGLFNPRTALNES 129
Query: 147 I-PFVAVEFDVYV----NSWDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNS 201
               +AVEFD +     N+WDP + H+GID+                 G+     ++YN 
Sbjct: 130 ANQVLAVEFDTFFAQNSNTWDPNYQHIGIDVNSIRSSKVVRWERRE--GKTLNVLVTYNP 187
Query: 202 STHNLSVAFT---GFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWE 258
           ST  + V  T   G R        L + VDL   LPE+V  GFS A+G  F   ++ SW 
Sbjct: 188 STRTIDVVATYPDGQR------YQLSHVVDLTTILPEWVRVGFSAASGEQFQTHNLESWS 241
Query: 259 FNSSL 263
           F S+L
Sbjct: 242 FTSTL 246

>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus Length = 242

Iteration: 1
 Score =  113 bits (282), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 121/251 (48%), Gaps = 24/251 (9%)
Query: 31  LASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPA----NRETAGRATYNQSMRLWDK 86
           L+  L+FN+  F P   + I    A   +  V+Q+         + GRA Y   +++WD 
Sbjct: 2   LSDDLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDS 61
Query: 87  ATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSS 146
            TG +  F T FSFV+ +  S    DGLAFFLAP  S+IP+    G FGL   ++  +S+
Sbjct: 62  ITGKVASFATSFSFVVKADKSDG-VDGLAFFLAPANSQIPSGSSAGMFGLFSSSDSKSSN 120
Query: 147 IPFVAVEFDVYV----NSWDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSS 202
              +AVEFD Y     N WDP F H+GID+                 G   +  I+Y + 
Sbjct: 121 -QIIAVEFDTYFGKAYNPWDPDFKHIGIDV--NSIKSIKTVKWDWRNGEVADVVITYRAP 177
Query: 203 THNLSVAFT----GFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATG--VDFAIFSIYS 256
           T +L+V  +    G  N +         VDL+  LPE+V+ GFS   G   +F    + S
Sbjct: 178 TKSLTVCLSYPSDGTSNIITA------SVDLKAILPEWVSVGFSGGVGNAAEFETHDVLS 231
Query: 257 WEFNSSLEMDD 267
           W F S+LE ++
Sbjct: 232 WYFTSNLEANN 242

>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia. Length = 237

Iteration: 1
 Score =  112 bits (281), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 21/242 (8%)
Query: 34  ALTFNYTSFSPQYDDNITYERAYPDSNRVIQLP------ANRETAGRATYNQSMRLWDKA 87
           +L+F++  F+P     I    A   S  V+QL        + ++ GRA Y    ++WD  
Sbjct: 3   SLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDST 62
Query: 88  TGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSI 147
           TGN+  F T F+F+I + N +  ADGLAFFLAP  ++ P +  GG  G+ KD    N S 
Sbjct: 63  TGNVASFVTSFTFIIQAPNPATTADGLAFFLAPVDTQ-PLDL-GGMLGIFKDGY-FNKSN 119
Query: 148 PFVAVEFDVYVNS-WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
             VAVEFD + N  WDP   H+GI++                 G     +ISY +ST +L
Sbjct: 120 QIVAVEFDTFSNGDWDPKGRHLGINV--NSIESIKTVPWNWTNGEVANVFISYEASTKSL 177
Query: 207 --SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS---IYSWEFNS 261
             S+ +     + ++    D  VD++  LPE+V FGFS  TG+D        + SW F S
Sbjct: 178 TASLVYPSLETSFII----DAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFES 233
Query: 262 SL 263
           +L
Sbjct: 234 NL 235

>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose Length = 241

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 35  LTFNYTSFSPQYDDNITYER-AYPDSNRVIQLP------ANRETAGRATYNQSMRLWDKA 87
           ++FN+  F  Q ++ +  +R A   SN V++L           + GRA Y + +++WD  
Sbjct: 3   ISFNFNQFH-QNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDST 61
Query: 88  TGNLTDFTTHFSFVI-DSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSS 146
           TGN+  F T FSF I       + ADGL FF+AP  ++  T +GGG FG+     PL S 
Sbjct: 62  TGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQ--TGEGGGYFGIYN---PL-SP 115
Query: 147 IPFVAVEFDVYVNSWDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            PFVAVEFD + N+WDP   H+GID+                 G      I Y++ST  L
Sbjct: 116 YPFVAVEFDTFRNTWDPQIPHIGIDV--NSVISTKTVPFTLDNGGIANVVIKYDASTKIL 173
Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFA-------IFSIYSWEF 259
            V       +L  +  +   VDL+Q LPE V  GFS ATG              I SW F
Sbjct: 174 HVVLV--FPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWSF 231
Query: 260 NSSLEMDDE 268
           ++SL   +E
Sbjct: 232 SASLPGTNE 240

>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form Length = 242

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 35  LTFNYTSFSPQYDDNITYER-AYPDSNRVIQLP------ANRETAGRATYNQSMRLWDKA 87
           ++FN+  F  Q ++ +  +R A   SN V++L           + GRA Y + +++WD  
Sbjct: 4   ISFNFNQFH-QNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDST 62
Query: 88  TGNLTDFTTHFSFVI-DSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSS 146
           TGN+  F T FSF I       + ADGL FF+AP  ++  T +GGG FG+     PL S 
Sbjct: 63  TGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQ--TGEGGGYFGIYN---PL-SP 116
Query: 147 IPFVAVEFDVYVNSWDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            PFVAVEFD + N+WDP   H+GID+                 G      I Y++ST  L
Sbjct: 117 YPFVAVEFDTFRNTWDPQIPHIGIDV--NSVISTKTVPFTLDNGGIANVVIKYDASTKIL 174
Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFA-------IFSIYSWEF 259
            V       +L  +  +   VDL+Q LPE V  GFS ATG              I SW F
Sbjct: 175 HVVLV--FPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWSF 232
Query: 260 NSSLEMDDE 268
           ++SL   +E
Sbjct: 233 SASLPGTNE 241

>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex With B Blood Group Trisaccharide Length = 237

Iteration: 1
 Score =  109 bits (273), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 119/244 (48%), Gaps = 26/244 (10%)
Query: 35  LTFNYTSFSPQYDDNITYER-AYPDSNRVIQLP------ANRETAGRATYNQSMRLWDKA 87
           ++FN+  F  Q ++ +  +R A   SN V++L           + GRA Y + +++WD  
Sbjct: 3   ISFNFNQFH-QNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDST 61
Query: 88  TGNLTDFTTHFSFVIDSR-NSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSS 146
           TGN+  F T FSF I       + ADGL FF+AP  ++  T +GGG FG+     PL S 
Sbjct: 62  TGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQ--TGEGGGYFGIYN---PL-SP 115
Query: 147 IPFVAVEFDVYVNSWDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            PFVAVEFD + N+WDP   H+GID+                 G      I Y++ST  L
Sbjct: 116 YPFVAVEFDTFRNTWDPQIPHIGIDV--NSVISTKTVPFTLDNGGIANVVIKYDASTKIL 173
Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFA-------IFSIYSWEF 259
            V       +L  +  +   VDL+Q LPE V  GFS ATG              I SW F
Sbjct: 174 HVVLV--FPSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWSF 231
Query: 260 NSSL 263
           ++SL
Sbjct: 232 SASL 235

>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide Length = 253

Iteration: 1
 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 123/253 (48%), Gaps = 22/253 (8%)
Query: 32  ASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETA-------GRATYNQSMRLW 84
           A  ++F++  F P+  + I    A   S+  +QL    E         GRA Y+  + +W
Sbjct: 1   AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIW 60
Query: 85  DKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN 144
           DK TG++  F   F+F   + ++   ADGLAFFLAP  +K  T+   G  GL  +NE   
Sbjct: 61  DKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTH--AGYLGLFNENE--- 115
Query: 145 SSIPFVAVEFDVYVNSWDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTH 204
           S    VAVEFD + NSWDP   H+GI++                  +  +  I+Y++ST 
Sbjct: 116 SGDQVVAVEFDTFRNSWDPPNPHIGINV--NSIRSIKTTSWDLANNKVAKVLITYDASTS 173
Query: 205 NL--SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS--IYSWEFN 260
            L  S+ +   R + +    L   VDL+  LPE+V  GFS ATG+D    S  + SW F 
Sbjct: 174 LLVASLVYPSQRTSNI----LSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFA 229
Query: 261 SSLEMDDETTNPV 273
           S+L       +P+
Sbjct: 230 SNLPHASSNIDPL 242

>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn Antigen Length = 233

Iteration: 1
 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 121/239 (50%), Gaps = 22/239 (9%)
Query: 36  TFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETA------GRATYNQSMRLWDKATG 89
           +F++T+F+P  ++ I  E A  +S   ++L A    A      GRA Y   + + D  T 
Sbjct: 5   SFSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDNTT- 63
Query: 90  NLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPF 149
            L  FTT FSFV+ +  ++  ADGLAFFLAP  ++ P  +GG   GL  D    ++S   
Sbjct: 64  -LASFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQ-PQARGG-FLGLFADRAH-DASYQT 119
Query: 150 VAVEFDVYVNSWDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL--S 207
           VAVEFD Y N+WDP ++H+GID                  G +    I+Y +ST  L  S
Sbjct: 120 VAVEFDTYSNAWDPNYTHIGID--TNGIESKKTTPFDMVYGEKANIVITYQASTKALAAS 177
Query: 208 VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS---IYSWEFNSSL 263
           + F   + +  V      +VDLR  LPE+V  GFS  TG++  +     I SW F  SL
Sbjct: 178 LVFPVSQTSYAVSA----RVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWSFAVSL 232

>pdb|1FAT|A Chain A, Phytohemagglutinin-L Length = 252

Iteration: 1
 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 122/246 (49%), Gaps = 31/246 (12%)
Query: 37  FNYTSFSPQYDDNITYERAYPDSNRVIQLPANRE----TAGRATYNQSMRLWDKATGNLT 92
           FN T+   Q D +++         R+  L  N E    + GRA Y+  +++WD  TG + 
Sbjct: 11  FNETNLILQRDASVSSSGQL----RLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTVA 66
Query: 93  DFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGG--GSFGLTKDNEPLNSSIPFV 150
            F T F+F I   N++  ADGLAF L P GS+ P +KGG  G F      +  NS+   V
Sbjct: 67  SFATSFTFNIQVPNNAGPADGLAFALVPVGSQ-PKDKGGFLGLF------DGSNSNFHTV 119
Query: 151 AVEFD-VYVNSWDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL--S 207
           AVEFD +Y   WDPT  H+GID+                 G   E  I+Y+SST+ L  S
Sbjct: 120 AVEFDTLYNKDWDPTERHIGIDV--NSIRSIKTTRWDFVNGENAEVLITYDSSTNLLVAS 177
Query: 208 VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV---DFAIFSIYSWEFNSSLE 264
           + +   + + +V       VDL+  LPE+V+ GFS  TG+   +     + SW F S L 
Sbjct: 178 LVYPSQKTSFIVSD----TVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSFASKLS 233
Query: 265 MDDETT 270
             DETT
Sbjct: 234 --DETT 237

>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus Length = 253

Iteration: 1
 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 123/243 (50%), Gaps = 17/243 (6%)
Query: 37  FNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTT 96
           FN +SF  Q D  ++  +      +   LP    + GRA Y+  ++++DK+TG +  + T
Sbjct: 11  FNSSSFILQGDATVSSSKLRLTKVKGNGLP-TLSSLGRAFYSSPIQIYDKSTGAVASWAT 69
Query: 97  HFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDV 156
            F+  I + N S  ADG+AF L P GS+  +N G   F    D++  ++S   VAVEFD 
Sbjct: 70  SFTANIFAPNKSSSADGIAFALVPVGSEPKSNSG---FLGVFDSDVYDNSAQTVAVEFDT 126
Query: 157 YVNS-WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL--SVAFTGF 213
           + N+ WDPT  H+GID+                 G+  E  I+YN++T  L  S+     
Sbjct: 127 FSNTDWDPTSRHIGIDV--NSIKSIRTASWGLANGQNAEILITYNAATSLLVASLVHPSR 184
Query: 214 RNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFA---IFSIYSWEFNSSLEMDDETT 270
           R + +V +    +VD+   LPE+V+ GFS  TG+         + SW F S L  DD TT
Sbjct: 185 RTSYIVSE----RVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASKLP-DDSTT 239
Query: 271 NPV 273
            P+
Sbjct: 240 EPL 242

>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In Complex With Adenine And Galactose Length = 281

Iteration: 1
 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 131/270 (48%), Gaps = 26/270 (9%)
Query: 14  LLSFFTITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETA- 72
           L+SF    I   L ++  A++      +F    + N+  +R    S+  +++    E   
Sbjct: 3   LISFTMKRIVLFLILLTKAASANLISFTFKKFNETNLILQRDATVSSGKLRITKAAENGV 62
Query: 73  ------GRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIP 126
                 GRA Y+  +++WD  TG +  + T F+F + + N++  ADGLAF L P GS+ P
Sbjct: 63  PTAGSLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQAPNAASPADGLAFALVPVGSQ-P 121
Query: 127 TNKGG--GSFGLTKDNEPLNSSIPFVAVEFDVYVN-SWDPTFSHVGIDIXXXXXXXXXXX 183
            +KGG  G F    D++   SS   VAVEFD + N  WDPT  H+GID+           
Sbjct: 122 KDKGGFLGLF----DSKNYASSNQTVAVEFDTFYNGGWDPTERHIGIDV--NSIKSIKTT 175
Query: 184 XXXXXXGRRNEAWISYNSSTHNL--SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGF 241
                 G   E  I+Y+SST+ L  S+     + + +V +    +VDL   LPE+V+ GF
Sbjct: 176 SWDFANGENAEVLITYDSSTNLLVASLVHPSQKTSFIVSE----RVDLTSVLPEWVSVGF 231
Query: 242 SMATGVDFAIF---SIYSWEFNSSLEMDDE 268
           S  TG+         + SW F S L ++ E
Sbjct: 232 SATTGLSKGYVETNEVLSWSFASKLSINKE 261

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score =  103 bits (256), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 131/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++  E  I+ +  H N+++L G   + K +++V E+M NGSLDS
Sbjct: 76  VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K ++  T      + + +ASG+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 499 LARLVEHAKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           LAR++E    +  T   G +   + +PE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 193 LARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-- 250
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDG-QQIERLMIVGLWCAHPDENL 612
                         W++  N  +++AVD   RL    D    + +LM   L C   D N 
Sbjct: 251 -------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLM---LDCWQKDRNN 293
Query: 613 RPSIRQVIHVLN 624
           RP   Q++ +L+
Sbjct: 294 RPKFEQIVSILD 305

>pdb|2PEL|A Chain A, Peanut Lectin Length = 236

Iteration: 1
 Score =  102 bits (254), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 118/239 (49%), Gaps = 17/239 (7%)
Query: 32  ASALTFNYTSFSPQYDDNITYERAYPD-SNRVIQLP-ANR-ETAGRATYNQSMRLWDKAT 88
           A  ++FN+ SFS + +  I ++      SN  IQL   N+  + GR  Y   +R+W  AT
Sbjct: 1   AETVSFNFNSFS-EGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSAT 59
Query: 89  GNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNK-GGGSFGLTKDNEPLNSSI 147
           GN+  F T FSF +        ADG+ FF+AP+ ++IP    GGG+ G++      +   
Sbjct: 60  GNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGH--- 116
Query: 148 PFVAVEFDVYVNSW--DPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHN 205
            FV VEFD Y NS   DP   HVGID+                 G   +  + Y+SST  
Sbjct: 117 -FVGVEFDTYSNSEYNDPPTDHVGIDV--NSVDSVKTVPWNSVSGAVVKVTVIYDSSTKT 173
Query: 206 LSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDF-AIFSIYSWEFNSSL 263
           LSVA T    ++  +  +   VDL+  LPE V FGFS +  +    I  I SW F S+L
Sbjct: 174 LSVAVTNDNGDITTIAQV---VDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTL 229

>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine Length = 253

Iteration: 1
 Score =  102 bits (254), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 73  GRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGG 132
           GRA Y+  ++++DK+TG +  + T F+  I + + + +ADG+AF L P GS+    + GG
Sbjct: 46  GRAFYSSPIQIYDKSTGAVASWATSFTVKISAPSKASFADGIAFALVPVGSE--PRRNGG 103
Query: 133 SFGLTKDNEPLNSSIPFVAVEFDVYVNS-WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGR 191
             G+  D++  N+S   VAVEFD   NS WDP+  H+GID+                 G 
Sbjct: 104 YLGVF-DSDVYNNSAQTVAVEFDTLSNSGWDPSMKHIGIDV--NSIKSIATVSWDLANGE 160
Query: 192 RNEAWISYNSSTHNL--SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD- 248
             E  I+YN++T  L  S+     R + +    L  +VD+   LPE+V+ GFS  TG+  
Sbjct: 161 NAEILITYNAATSLLVASLVHPSRRTSYI----LSERVDITNELPEYVSVGFSATTGLSE 216
Query: 249 --FAIFSIYSWEFNSSLEMDDETTNPV 273
                  + SW F S L  DD T  P+
Sbjct: 217 GYIETHDVLSWSFASKLP-DDSTAEPL 242

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score =  102 bits (254), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 104/186 (55%), Gaps = 9/186 (4%)
Query: 378 SYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS 435
           S +AVK + +     + + E+  EV I+ RLRH N+V  +G   +   L +V E++  GS
Sbjct: 61  SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120
Query: 436 LDSHLFKENSL--LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           L   L K  +   L    R  +A D+A G+ YL       +VHRD+KS N+++D  +  K
Sbjct: 121 LYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVK 179
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           + DFGL+RL + +    +   AGT  +MAPE      ++++SDVYSFG++  E+A  ++P
Sbjct: 180 VCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
Query: 554 ---INP 556
              +NP
Sbjct: 239 WGNLNP 244

>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose Length = 232

Iteration: 1
 Score =  102 bits (254), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 118/239 (49%), Gaps = 17/239 (7%)
Query: 32  ASALTFNYTSFSPQYDDNITYERAYPD-SNRVIQLP-ANR-ETAGRATYNQSMRLWDKAT 88
           A  ++FN+ SFS + +  I ++      SN  IQL   N+  + GR  Y   +R+W  AT
Sbjct: 1   AETVSFNFNSFS-EGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSAT 59
Query: 89  GNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNK-GGGSFGLTKDNEPLNSSI 147
           GN+  F T FSF +        ADG+ FF+AP+ ++IP    GGG+ G++      +   
Sbjct: 60  GNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGH--- 116
Query: 148 PFVAVEFDVYVNSW--DPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHN 205
            FV VEFD Y NS   DP   HVGID+                 G   +  + Y+SST  
Sbjct: 117 -FVGVEFDTYSNSEYNDPPTDHVGIDV--NSVDSVKTVPWNSVSGAVVKVTVIYDSSTKT 173
Query: 206 LSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDF-AIFSIYSWEFNSSL 263
           LSVA T    ++  +  +   VDL+  LPE V FGFS +  +    I  I SW F S+L
Sbjct: 174 LSVAVTNDNGDITTIAQV---VDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTL 229

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score =  102 bits (253), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 131/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++  E  I+ +  H N+++L G   + K +++V E+M NGSLDS
Sbjct: 76  VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K ++  T      + + +ASG+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGFVHRDLAARNILINSNLVCKVSDFG 192
Query: 499 LARLVEHAKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           L+R++E    +  T   G +   + +PE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-- 250
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDG-QQIERLMIVGLWCAHPDENL 612
                         W++  N  +++AVD   RL    D    + +LM   L C   D N 
Sbjct: 251 -------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLM---LDCWQKDRNN 293
Query: 613 RPSIRQVIHVLN 624
           RP   Q++ +L+
Sbjct: 294 RPKFEQIVSILD 305

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score =  102 bits (253), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 131/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++  E  I+ +  H N+++L G   + K +++V E+M NGSLDS
Sbjct: 76  VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K ++  T      + + +ASG+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 499 LARLVEHAKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           L+R++E    +  T   G +   + +PE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-- 250
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDG-QQIERLMIVGLWCAHPDENL 612
                         W++  N  +++AVD   RL    D    + +LM   L C   D N 
Sbjct: 251 -------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLM---LDCWQKDRNN 293
Query: 613 RPSIRQVIHVLN 624
           RP   Q++ +L+
Sbjct: 294 RPKFEQIVSILD 305

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score =  102 bits (253), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 131/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++  E  I+ +  H N+++L G   + K +++V E+M NGSLDS
Sbjct: 76  VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K ++  T      + + +ASG+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 499 LARLVEHAKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           L+R++E    +  T   G +   + +PE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-- 250
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDG-QQIERLMIVGLWCAHPDENL 612
                         W++  N  +++AVD   RL    D    + +LM   L C   D N 
Sbjct: 251 -------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLM---LDCWQKDRNN 293
Query: 613 RPSIRQVIHVLN 624
           RP   Q++ +L+
Sbjct: 294 RPKFEQIVSILD 305

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score =  102 bits (253), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 131/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++  E  I+ +  H N+++L G   + K +++V E+M NGSLDS
Sbjct: 76  VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K ++  T      + + +ASG+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 499 LARLVEHAKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           L+R++E    +  T   G +   + +PE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-- 250
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDG-QQIERLMIVGLWCAHPDENL 612
                         W++  N  +++AVD   RL    D    + +LM   L C   D N 
Sbjct: 251 -------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLM---LDCWQKDRNN 293
Query: 613 RPSIRQVIHVLN 624
           RP   Q++ +L+
Sbjct: 294 RPKFEQIVSILD 305

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score =  102 bits (253), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 131/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++  E  I+ +  H N+++L G   + K +++V E+M NGSLDS
Sbjct: 74  VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 133
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K ++  T      + + +ASG+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 134 FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFG 190
Query: 499 LARLVEHAKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           L+R++E    +  T   G +   + +PE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 191 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-- 248
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDG-QQIERLMIVGLWCAHPDENL 612
                         W++  N  +++AVD   RL    D    + +LM   L C   D N 
Sbjct: 249 -------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLM---LDCWQKDRNN 291
Query: 613 RPSIRQVIHVLN 624
           RP   Q++ +L+
Sbjct: 292 RPKFEQIVSILD 303

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score =  102 bits (253), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 131/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++  E  I+ +  H N+++L G   + K +++V E+M NGSLDS
Sbjct: 47  VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 106
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K ++  T      + + +ASG+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 107 FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFG 163
Query: 499 LARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           L+R++E    +  T   G   + + +PE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 164 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-- 221
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDG-QQIERLMIVGLWCAHPDENL 612
                         W++  N  +++AVD   RL    D    + +LM   L C   D N 
Sbjct: 222 -------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLM---LDCWQKDRNN 264
Query: 613 RPSIRQVIHVLN 624
           RP   Q++ +L+
Sbjct: 265 RPKFEQIVSILD 276

>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin Length = 242

Iteration: 1
 Score =  102 bits (253), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 70  ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNK 129
           ++ GRA Y   + +WD  TG +  F T F F I + N +  ADGLAFFLAP  S  P   
Sbjct: 47  KSLGRALYASPINIWDSKTGVVASFATSFRFTIYAPNIATIADGLAFFLAPVSS--PPKA 104
Query: 130 GGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXX 187
           G G  GL  D+   NSS   VAVEFD Y N+   DP  +H+GID+               
Sbjct: 105 GAGFLGLF-DSAVFNSSYQTVAVEFDTYENTVFLDPPDTHIGIDV--NSIKSIKTVKWDL 161
Query: 188 XXGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV 247
             G   +  I+Y+SS   L  A     +    +  L   VDL+  LPE+V+ GFS ATG 
Sbjct: 162 ANGEAAKVLITYDSSAKLLVAALVYPSSKTSFI--LSDVVDLKSVLPEWVSIGFSAATGA 219
Query: 248 D---FAIFSIYSWEFNSSLEM 265
                    ++SW F S L  
Sbjct: 220 SSGYIETHDVFSWSFASKLSF 240

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score =  102 bits (253), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 131/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++  E  I+ +  H N+++L G   + K +++V E+M NGSLDS
Sbjct: 76  VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K ++  T      + + +ASG+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 499 LARLVEHAKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           L+R++E    +  T   G +   + +PE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-- 250
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDG-QQIERLMIVGLWCAHPDENL 612
                         W++  N  +++AVD   RL    D    + +LM   L C   D N 
Sbjct: 251 -------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLM---LDCWQKDRNN 293
Query: 613 RPSIRQVIHVLN 624
           RP   Q++ +L+
Sbjct: 294 RPKFEQIVSILD 305

>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin Length = 256

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 70  ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNK 129
           ++ GRA Y   + +WD  TG +  F T F F I + N +  ADGLAFFLAP  S  P   
Sbjct: 47  KSLGRALYASPINIWDSKTGVVASFATSFRFTIYAPNIATIADGLAFFLAPVSS--PPKA 104
Query: 130 GGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXX 187
           G G  GL  D+   NSS   VAVEFD Y N+   DP  +H+GID+               
Sbjct: 105 GAGFLGLF-DSAVFNSSYQTVAVEFDTYENTVFLDPPDTHIGIDV--NSIKSIKTVKWDL 161
Query: 188 XXGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV 247
             G   +  I+Y+SS   L  A     +    +  L   VDL+  LPE+V+ GFS ATG 
Sbjct: 162 ANGEAAKVLITYDSSAKLLVAALVYPSSKTSFI--LSDVVDLKSVLPEWVSIGFSAATGA 219
Query: 248 D---FAIFSIYSWEFNSSLEM 265
                    ++SW F S L  
Sbjct: 220 SSGYIETHDVFSWSFASKLSF 240

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 130/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++  E  I+ +  H N+++L G   + K +++V E+M NGSLDS
Sbjct: 76  VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K ++  T      + + +ASG+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 499 LARLVEHAKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           L R++E    +  T   G +   + +PE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 193 LGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-- 250
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDG-QQIERLMIVGLWCAHPDENL 612
                         W++  N  +++AVD   RL    D    + +LM   L C   D N 
Sbjct: 251 -------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLM---LDCWQKDRNN 293
Query: 613 RPSIRQVIHVLN 624
           RP   Q++ +L+
Sbjct: 294 RPKFEQIVSILD 305

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 131/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++  E  I+ +  H N+++L G   + K +++V E+M NGSLDS
Sbjct: 64  VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 123
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K ++  T      + + +ASG+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 124 FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFG 180
Query: 499 LARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           L+R++E    +  T   G   + + +PE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 181 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-- 238
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDG-QQIERLMIVGLWCAHPDENL 612
                         W++  N  +++AVD   RL    D    + +LM   L C   D N 
Sbjct: 239 -------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLM---LDCWQKDRNN 281
Query: 613 RPSIRQVIHVLN 624
           RP   Q++ +L+
Sbjct: 282 RPKFEQIVSILD 293

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 7/169 (4%)
Query: 393 IKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSL--LTWE 450
           + E+  EV I+ RLRH N+V  +G   +   L +V E++  GSL   L K  +   L   
Sbjct: 78  VNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDER 137
Query: 451 FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ 510
            R  +A D+A G+ YL       +VHR++KS N+++D  +  K+ DFGL+RL      S 
Sbjct: 138 RRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196
Query: 511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP---INP 556
            +  AGT  +MAPE      ++++SDVYSFG++  E+A  ++P   +NP
Sbjct: 197 KSA-AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP 244

>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney Bean Length = 233

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 118/238 (49%), Gaps = 25/238 (10%)
Query: 37  FNYTSFSPQYDDNITYERAYPDSNRVIQLPANRE----TAGRATYNQSMRLWDKATGNLT 92
           FN T+   Q D +++         R+  L  N E    + GRA Y+  +++WD  TG + 
Sbjct: 11  FNETNLILQRDASVSSSGQL----RLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTVA 66
Query: 93  DFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAV 152
            F T F+F I   N++  ADGLAF L P GS+ P +K GG  GL   +   NS+   VAV
Sbjct: 67  SFATSFTFNIQVPNNAGPADGLAFALVPVGSQ-PKDK-GGFLGLFDGS---NSNFHTVAV 121
Query: 153 EFD-VYVNSWDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL--SVA 209
           EFD +Y   WDPT  H+GID+                 G   E  I+Y+SST+ L  S+ 
Sbjct: 122 EFDTLYNKDWDPTERHIGIDV--NSIRSIKTTRWDFVNGENAEVLITYDSSTNLLVASLV 179
Query: 210 FTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV---DFAIFSIYSWEFNSSLE 264
           +   + + +V       VDL+  LPE+V+ GFS  TG+   +     + SW F S L 
Sbjct: 180 YPSQKTSFIVSD----TVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSFASKLS 233

>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 251

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 98/198 (49%), Gaps = 16/198 (8%)
Query: 73  GRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGG 132
           GRATY+  + +WD ATG +  F T F F I + N +  ADGLAFFLAP  S    + GGG
Sbjct: 49  GRATYSAPINIWDSATGLVASFATSFRFTIYAPNIATIADGLAFFLAPVASA--PDSGGG 106
Query: 133 SFGLTKDNEPLNSSIPFVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXG 190
             GL  D+    S+   VAVEFD Y N+   DP ++H+G D+                 G
Sbjct: 107 FLGLF-DSAVSGSTYQTVAVEFDTYENTVFTDPPYTHIGFDV--NSISSIKTVKWSLANG 163
Query: 191 RRNEAWISYNSSTHNL--SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD 248
              +  I+YNS+   L  S+ +   + + ++       VDL   LPE+V  GFS ATG  
Sbjct: 164 EAAKVLITYNSAVKLLVASLVYPSSKTSFILAD----IVDLSSVLPEWVRVGFSAATGAS 219
Query: 249 ---FAIFSIYSWEFNSSL 263
                   ++SW F S L
Sbjct: 220 GGKIETHDVFSWSFASKL 237

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 4/168 (2%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K + +GS     ++  E +++ +L H  LVQL G C E+  + LV+EFM +G L  +
Sbjct: 54  VAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 112
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
           L  +  L   E    +  D+  G+ YL+E    CV+HRD+ + N ++  N   K+ DFG+
Sbjct: 113 LRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGM 169
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
            R V   + + +T     + + +PE  +  + S +SDV+SFG++  E+
Sbjct: 170 TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 217

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 94/168 (55%), Gaps = 4/168 (2%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K + +G+    +++  E +++ +L H  LVQL G C E+  + LV+EFM +G L  +
Sbjct: 32  VAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 90
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
           L  +  L   E    +  D+  G+ YL+E    CV+HRD+ + N ++  N   K+ DFG+
Sbjct: 91  LRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGM 147
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
            R V   + + +T     + + +PE  +  + S +SDV+SFG++  E+
Sbjct: 148 TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 195

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 130/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++  E  I+ +  H N+++L G   + K +++V E M NGSLDS
Sbjct: 76  VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K ++  T      + + +ASG+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFG 192
Query: 499 LARLVEHAKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           L+R++E    +  T   G +   + +PE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-- 250
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDG-QQIERLMIVGLWCAHPDENL 612
                         W++  N  +++AVD   RL    D    + +LM   L C   D N 
Sbjct: 251 -------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLM---LDCWQKDRNN 293
Query: 613 RPSIRQVIHVLN 624
           RP   Q++ +L+
Sbjct: 294 RPKFEQIVSILD 305

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 94/168 (55%), Gaps = 4/168 (2%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K + +G+    +++  E +++ +L H  LVQL G C E+  + LV+EFM +G L  +
Sbjct: 37  VAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 95
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
           L  +  L   E    +  D+  G+ YL+E    CV+HRD+ + N ++  N   K+ DFG+
Sbjct: 96  LRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGM 152
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
            R V   + + +T     + + +PE  +  + S +SDV+SFG++  E+
Sbjct: 153 TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 200

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 94/168 (55%), Gaps = 4/168 (2%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K + +G+    +++  E +++ +L H  LVQL G C E+  + LV+EFM +G L  +
Sbjct: 34  VAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
           L  +  L   E    +  D+  G+ YL+E    CV+HRD+ + N ++  N   K+ DFG+
Sbjct: 93  LRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGM 149
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
            R V   + + +T     + + +PE  +  + S +SDV+SFG++  E+
Sbjct: 150 TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 131/255 (51%), Gaps = 31/255 (12%)
Query: 379 YIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           ++A+K +  G +++  +++ SE  I+ +  H N++ L G   +   ++++ EFM NGSLD
Sbjct: 63  FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
           S L + +   T      + + +A+G+ YL    +   VHRD+ + NI+++SN   K+ DF
Sbjct: 123 SFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDF 179
Query: 498 GLARLVEH--AKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEI-ACGRK 552
           GL+R +E   +  + T+ L G +   + APE     K +  SDV+S+GIV  E+ + G +
Sbjct: 180 GLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER 239
Query: 553 PINPKAPQGQVSLLQWVWDLYGNGKLLEAV--DPRLCRDFDG-QQIERLMIVGLWCAHPD 609
           P                WD+  N  ++ A+  D RL    D    + +LM   L C   D
Sbjct: 240 P---------------YWDMT-NQDVINAIEQDYRLPPPMDCPSALHQLM---LDCWQKD 280
Query: 610 ENLRPSIRQVIHVLN 624
            N RP   Q+++ L+
Sbjct: 281 RNHRPKFGQIVNTLD 295

>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 239

Iteration: 1
 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 105/213 (49%), Gaps = 20/213 (9%)
Query: 58  DSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFF 117
           DSN V +      + GRATY+  + +WD ATG +  F T F F I + N +  ADGLAFF
Sbjct: 38  DSNGVPE----PSSLGRATYSAPINIWDSATGLVASFATSFRFTIYAPNIATIADGLAFF 93
Query: 118 LAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS--WDPTFSHVGIDIXXX 175
           LAP  S    + GGG  GL  D+   +++   VAVEFD Y N+   DP ++H+G D+   
Sbjct: 94  LAPVASA--PDSGGGFLGL-FDSAVGDTTYQTVAVEFDTYENTVFTDPPYTHIGFDV--N 148
Query: 176 XXXXXXXXXXXXXXGRRNEAWISYNSSTHNL--SVAFTGFRNNLVVMQGLDYQVDLRQHL 233
                         G   +  I+YNS+   L  S+ +   + + ++       VDL   L
Sbjct: 149 SISSIKTVKWSLANGEAAKVLITYNSAVKLLVASLVYPSSKTSFILAD----IVDLSSVL 204
Query: 234 PEFVTFGFSMATGVD---FAIFSIYSWEFNSSL 263
           PE+V  GFS ATG          ++SW F S L
Sbjct: 205 PEWVRVGFSAATGASKGYIETHDVFSWSFASKL 237

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 130/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++  E  I+ +  H N+++L G   + K +++V E M NGSLDS
Sbjct: 47  VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 106
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K ++  T      + + +ASG+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 107 FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFG 163
Query: 499 LARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           L+R++E    +  T   G   + + +PE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 164 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-- 221
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDG-QQIERLMIVGLWCAHPDENL 612
                         W++  N  +++AVD   RL    D    + +LM   L C   D N 
Sbjct: 222 -------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLM---LDCWQKDRNN 264
Query: 613 RPSIRQVIHVLN 624
           RP   Q++ +L+
Sbjct: 265 RPKFEQIVSILD 276

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 130/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++  E  I+ +  H N+++L G   + K +++V E M NGSLDS
Sbjct: 76  VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K ++  T      + + +ASG+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 499 LARLVEHAKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           L+R++E    +  T   G +   + +PE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-- 250
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDG-QQIERLMIVGLWCAHPDENL 612
                         W++  N  +++AVD   RL    D    + +LM   L C   D N 
Sbjct: 251 -------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLM---LDCWQKDRNN 293
Query: 613 RPSIRQVIHVLN 624
           RP   Q++ +L+
Sbjct: 294 RPKFEQIVSILD 305

>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With Sialyllactose Length = 239

Iteration: 1
 Score = 99.4 bits (246), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 115/241 (47%), Gaps = 17/241 (7%)
Query: 35  LTFNYTSFSPQYDDNITYERAYPDSNRVIQLP------ANRETAGRATYNQSMRLWDKAT 88
           L+F   +F P   D +    A   S  V+QL         + + GRA Y   +R+W   T
Sbjct: 4   LSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNTT 63
Query: 89  GNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIP 148
           G++  F+T F+FV+ + N    +DGLAF+LAP  S+IP+       GL  ++   +SS  
Sbjct: 64  GSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSN-SDSSNQ 122
Query: 149 FVAVEFDVYV----NSWDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTH 204
            VAVEFD Y     + WDP + H+GID+                 G    A I+Y +   
Sbjct: 123 IVAVEFDTYFAHSYDPWDPNYRHIGIDV--NGIESIKTVQWDWINGGVAFATITYLAPNK 180
Query: 205 NLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATG--VDFAIFSIYSWEFNSS 262
            L +A   + +N      +   VDL++ LPE+V  GFS ATG   +     + SW F S+
Sbjct: 181 TL-IASLVYPSNQTTFS-VAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWSFTST 238
Query: 263 L 263
           L
Sbjct: 239 L 239

>pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With Alpha-Methyl Glucose Length = 252

Iteration: 1
 Score = 99.4 bits (246), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 34  ALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPAN-------RETAGRATYNQSMRLWDK 86
           +L+F + +F P    N+ ++      N  +QL            T GR  ++  + LW+K
Sbjct: 3   SLSFGFPTF-PSDQKNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEK 61
Query: 87  ATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSS 146
           ++  + +F + FSF + S  S+  ADG+AFF+AP  + IP+  GGG  GL       N+S
Sbjct: 62  SSSRVANFQSQFSFSLKSPLSNG-ADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTS 120
Query: 147 I-PFVAVEFDVYV----NSWDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNS 201
               +AVEFD +     N+WDP + H+GID+                 G+     +++N 
Sbjct: 121 ANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVKWDRRD--GQSLNVLVTFNP 178
Query: 202 STHNLSVAFT---GFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWE 258
           ST NL V  T   G R  +       Y+VD+R  LPE+V  GFS A+G  +   ++ SW 
Sbjct: 179 STRNLDVVATYSDGTRYEV------SYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWS 232
Query: 259 FNSSL 263
           F S+L
Sbjct: 233 FTSTL 237

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 99.0 bits (245), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 129/256 (50%), Gaps = 31/256 (12%)
Query: 378 SYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           S +A+K +  G +++  +E+ SE  I+ +  H N+++L G       ++++ EFM NG+L
Sbjct: 45  SCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 104
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
           DS L   +   T      + + +ASG+ YL    E   VHRD+ + NI+++SN   K+ D
Sbjct: 105 DSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSYVHRDLAARNILVNSNLVCKVSD 161
Query: 497 FGLARLVEH--AKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEI-ACGR 551
           FGL+R +E   +  ++T+ L G +   + APE     K +  SD +S+GIV  E+ + G 
Sbjct: 162 FGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGE 221
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAV--DPRLCRDFDG-QQIERLMIVGLWCAHP 608
           +P                WD+  N  ++ A+  D RL    D    + +LM   L C   
Sbjct: 222 RP---------------YWDM-SNQDVINAIEQDYRLPPPPDCPTSLHQLM---LDCWQK 262
Query: 609 DENLRPSIRQVIHVLN 624
           D N RP   QV+  L+
Sbjct: 263 DRNARPRFPQVVSALD 278

>pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The Dimmanoside Man(Alpha1-2)man Length = 252

Iteration: 1
 Score = 99.0 bits (245), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 121/245 (49%), Gaps = 25/245 (10%)
Query: 34  ALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPAN-------RETAGRATYNQSMRLWDK 86
           +L+F + +F P    N+ ++      N  +QL            T GR  ++  + LW+K
Sbjct: 3   SLSFGFPTF-PSDQKNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEK 61
Query: 87  ATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSS 146
           ++  + +F + FSF + S  S+  ADG+AFF+AP  + IP+  GGG  GL       N+S
Sbjct: 62  SSSRVANFQSQFSFSLKSPLSNG-ADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTS 120
Query: 147 I-PFVAVEFDVYV----NSWDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNS 201
               +AVEFD +     N+WDP + H+GID+                 G+     +++N 
Sbjct: 121 ANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVKWDRRD--GQSLNVLVTFNP 178
Query: 202 STHNLSVAFT---GFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWE 258
           ST NL V  T   G R  +       Y+VD+R  LPE+V  GFS A+G  +   ++ SW 
Sbjct: 179 STRNLDVVATYSDGTRYEV------SYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWS 232
Query: 259 FNSSL 263
           F S+L
Sbjct: 233 FTSTL 237

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 98.6 bits (244), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 127/258 (49%), Gaps = 27/258 (10%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T   +AVK++   +++ ++++  E++I+  L+H N+V+  G C+   ++ L L+ EF+P 
Sbjct: 41  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPY 100
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GSL  +L K    +      +    +  G+ YL     +  +HRD+ + NI++++    K
Sbjct: 101 GSLREYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVK 157
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACG 550
           IGDFGL +++   K        G   + + APE  T  K S  SDV+SFG+V  E+    
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
Query: 551 RKPINPKA---------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
            K  +P A          QGQ+ +   +  L  NG+L     PR     DG   E  MI+
Sbjct: 218 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL-----PRP----DGCPDEIYMIM 268
Query: 602 GLWCAHPDENLRPSIRQV 619
              C + + N RPS R +
Sbjct: 269 -TECWNNNVNQRPSFRDL 285

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 98.6 bits (244), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 93/168 (55%), Gaps = 4/168 (2%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K + +G+    +++  E +++ +L H  LVQL G C E+  + LV EFM +G L  +
Sbjct: 35  VAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDY 93
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
           L  +  L   E    +  D+  G+ YL+E    CV+HRD+ + N ++  N   K+ DFG+
Sbjct: 94  LRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGM 150
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
            R V   + + +T     + + +PE  +  + S +SDV+SFG++  E+
Sbjct: 151 TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 198

>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia Milbraedii Seed Agglutinin Length = 240

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 116/241 (48%), Gaps = 16/241 (6%)
Query: 32  ASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPA-------NRETAGRATYNQSMRLW 84
           A+++ F +T F     D I    A   SN+ +QL            + GRA Y   +RLW
Sbjct: 1   ANSVCFTFTDFESGQQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLW 60
Query: 85  DKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN 144
            +++  +  F T F+F I S+ SS  AD L FF+A   +KIP+  GG   GL   +    
Sbjct: 61  -QSSSLVASFETTFTFSI-SQGSSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNNAG 118
Query: 145 SSIPFVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSS 202
           S    V+VEFD Y N+   DP + H+GID+                 G+   A ISYNS+
Sbjct: 119 SDNGVVSVEFDTYPNTDIGDPNYRHIGIDV--NSIRSKAASKWDWQNGKTATAHISYNSA 176
Query: 203 THNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSS 262
           +  LSV  + + N+  V+  + + V+L    P +V  GFS  TG      +I +W F SS
Sbjct: 177 SKRLSVV-SSYPNSSPVV--VSFDVELNNVXPXWVRVGFSATTGQYTQTNNILAWSFRSS 233
Query: 263 L 263
           L
Sbjct: 234 L 234

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 31/259 (11%)
Query: 375 ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           +  S +A+K +  G +++  +E+ SE  I+ +  H N+++L G       ++++ EFM N
Sbjct: 40  KKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMEN 99
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G+LDS L   +   T      + + +ASG+ YL    E   VHRD+ + NI+++SN   K
Sbjct: 100 GALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSYVHRDLAARNILVNSNLVCK 156
Query: 494 IGDFGLARLVEH--AKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEI-A 548
           + DFGL+R +E   +  + T+ L G +   + APE     K +  SD +S+GIV  E+ +
Sbjct: 157 VSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
Query: 549 CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV--DPRLCRDFDG-QQIERLMIVGLWC 605
            G +P                WD+  N  ++ A+  D RL    D    + +LM   L C
Sbjct: 217 FGERP---------------YWDM-SNQDVINAIEQDYRLPPPPDCPTSLHQLM---LDC 257
Query: 606 AHPDENLRPSIRQVIHVLN 624
              D N RP   QV+  L+
Sbjct: 258 WQKDRNARPRFPQVVSALD 276

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 27/258 (10%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T   +AVK++   +++ ++++  E++I+  L+H N+V+  G C+   ++ L L+ E++P 
Sbjct: 69  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 128
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GSL  +L K    +      +    +  G+ YL     +  +HRD+ + NI++++    K
Sbjct: 129 GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVK 185
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACG 550
           IGDFGL +++   K        G   + + APE  T  K S  SDV+SFG+V  E+    
Sbjct: 186 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 245
Query: 551 RKPINPKA---------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
            K  +P A          QGQ+ +   +  L  NG+L     PR     DG   E  MI+
Sbjct: 246 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL-----PRP----DGCPDEIYMIM 296
Query: 602 GLWCAHPDENLRPSIRQV 619
              C + + N RPS R +
Sbjct: 297 -TECWNNNVNQRPSFRDL 313

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 27/258 (10%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T   +AVK++   +++ ++++  E++I+  L+H N+V+  G C+   ++ L L+ E++P 
Sbjct: 37  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 96
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GSL  +L K    +      +    +  G+ YL     +  +HRD+ + NI++++    K
Sbjct: 97  GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVK 153
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACG 550
           IGDFGL +++   K        G   + + APE  T  K S  SDV+SFG+V  E+    
Sbjct: 154 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 213
Query: 551 RKPINPKA---------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
            K  +P A          QGQ+ +   +  L  NG+L     PR     DG   E  MI+
Sbjct: 214 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL-----PRP----DGCPDEIYMIM 264
Query: 602 GLWCAHPDENLRPSIRQV 619
              C + + N RPS R +
Sbjct: 265 T-ECWNNNVNQRPSFRDL 281

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 27/258 (10%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T   +AVK++   +++ ++++  E++I+  L+H N+V+  G C+   ++ L L+ E++P 
Sbjct: 42  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 101
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GSL  +L K    +      +    +  G+ YL     +  +HRD+ + NI++++    K
Sbjct: 102 GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVK 158
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACG 550
           IGDFGL +++   K        G   + + APE  T  K S  SDV+SFG+V  E+    
Sbjct: 159 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 218
Query: 551 RKPINPKA---------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
            K  +P A          QGQ+ +   +  L  NG+L     PR     DG   E  MI+
Sbjct: 219 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL-----PRP----DGCPDEIYMIM 269
Query: 602 GLWCAHPDENLRPSIRQV 619
              C + + N RPS R +
Sbjct: 270 T-ECWNNNVNQRPSFRDL 286

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 27/258 (10%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T   +AVK++   +++ ++++  E++I+  L+H N+V+  G C+   ++ L L+ E++P 
Sbjct: 43  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 102
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GSL  +L K    +      +    +  G+ YL     +  +HRD+ + NI++++    K
Sbjct: 103 GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVK 159
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACG 550
           IGDFGL +++   K        G   + + APE  T  K S  SDV+SFG+V  E+    
Sbjct: 160 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 219
Query: 551 RKPINPKA---------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
            K  +P A          QGQ+ +   +  L  NG+L     PR     DG   E  MI+
Sbjct: 220 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL-----PRP----DGCPDEIYMIM 270
Query: 602 GLWCAHPDENLRPSIRQV 619
              C + + N RPS R +
Sbjct: 271 -TECWNNNVNQRPSFRDL 287

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 27/258 (10%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T   +AVK++   +++ ++++  E++I+  L+H N+V+  G C+   ++ L L+ E++P 
Sbjct: 41  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 100
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GSL  +L K    +      +    +  G+ YL     +  +HRD+ + NI++++    K
Sbjct: 101 GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVK 157
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACG 550
           IGDFGL +++   K        G   + + APE  T  K S  SDV+SFG+V  E+    
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
Query: 551 RKPINPKA---------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
            K  +P A          QGQ+ +   +  L  NG+L     PR     DG   E  MI+
Sbjct: 218 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL-----PRP----DGCPDEIYMIM 268
Query: 602 GLWCAHPDENLRPSIRQV 619
              C + + N RPS R +
Sbjct: 269 -TECWNNNVNQRPSFRDL 285

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 27/258 (10%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T   +AVK++   +++ ++++  E++I+  L+H N+V+  G C+   ++ L L+ E++P 
Sbjct: 45  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 104
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GSL  +L K    +      +    +  G+ YL     +  +HRD+ + NI++++    K
Sbjct: 105 GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVK 161
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACG 550
           IGDFGL +++   K        G   + + APE  T  K S  SDV+SFG+V  E+    
Sbjct: 162 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 221
Query: 551 RKPINPKA---------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
            K  +P A          QGQ+ +   +  L  NG+L     PR     DG   E  MI+
Sbjct: 222 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL-----PRP----DGCPDEIYMIM 272
Query: 602 GLWCAHPDENLRPSIRQV 619
              C + + N RPS R +
Sbjct: 273 -TECWNNNVNQRPSFRDL 289

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 27/258 (10%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T   +AVK++   +++ ++++  E++I+  L+H N+V+  G C+   ++ L L+ E++P 
Sbjct: 44  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 103
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GSL  +L K    +      +    +  G+ YL     +  +HRD+ + NI++++    K
Sbjct: 104 GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVK 160
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACG 550
           IGDFGL +++   K        G   + + APE  T  K S  SDV+SFG+V  E+    
Sbjct: 161 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 220
Query: 551 RKPINPKA---------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
            K  +P A          QGQ+ +   +  L  NG+L     PR     DG   E  MI+
Sbjct: 221 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL-----PRP----DGCPDEIYMIM 271
Query: 602 GLWCAHPDENLRPSIRQV 619
              C + + N RPS R +
Sbjct: 272 -TECWNNNVNQRPSFRDL 288

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 27/258 (10%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T   +AVK++   +++ ++++  E++I+  L+H N+V+  G C+   ++ L L+ E++P 
Sbjct: 38  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 97
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GSL  +L K    +      +    +  G+ YL     +  +HRD+ + NI++++    K
Sbjct: 98  GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVK 154
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACG 550
           IGDFGL +++   K        G   + + APE  T  K S  SDV+SFG+V  E+    
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
Query: 551 RKPINPKA---------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
            K  +P A          QGQ+ +   +  L  NG+L     PR     DG   E  MI+
Sbjct: 215 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL-----PRP----DGCPDEIYMIM 265
Query: 602 GLWCAHPDENLRPSIRQV 619
              C + + N RPS R +
Sbjct: 266 -TECWNNNVNQRPSFRDL 282

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 27/258 (10%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T   +AVK++   +++ ++++  E++I+  L+H N+V+  G C+   ++ L L+ E++P 
Sbjct: 38  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 97
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GSL  +L K    +      +    +  G+ YL     +  +HRD+ + NI++++    K
Sbjct: 98  GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVK 154
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACG 550
           IGDFGL +++   K        G   + + APE  T  K S  SDV+SFG+V  E+    
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
Query: 551 RKPINPKA---------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
            K  +P A          QGQ+ +   +  L  NG+L     PR     DG   E  MI+
Sbjct: 215 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL-----PRP----DGCPDEIYMIM 265
Query: 602 GLWCAHPDENLRPSIRQV 619
              C + + N RPS R +
Sbjct: 266 -TECWNNNVNQRPSFRDL 282

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 27/258 (10%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T   +AVK++   +++ ++++  E++I+  L+H N+V+  G C+   ++ L L+ E++P 
Sbjct: 36  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 95
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GSL  +L K    +      +    +  G+ YL     +  +HRD+ + NI++++    K
Sbjct: 96  GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVK 152
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACG 550
           IGDFGL +++   K        G   + + APE  T  K S  SDV+SFG+V  E+    
Sbjct: 153 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 212
Query: 551 RKPINPKA---------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
            K  +P A          QGQ+ +   +  L  NG+L     PR     DG   E  MI+
Sbjct: 213 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL-----PRP----DGCPDEIYMIM 263
Query: 602 GLWCAHPDENLRPSIRQV 619
              C + + N RPS R +
Sbjct: 264 -TECWNNNVNQRPSFRDL 280

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 27/258 (10%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T   +AVK++   +++ ++++  E++I+  L+H N+V+  G C+   ++ L L+ E++P 
Sbjct: 56  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 115
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GSL  +L K    +      +    +  G+ YL     +  +HRD+ + NI++++    K
Sbjct: 116 GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVK 172
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACG 550
           IGDFGL +++   K        G   + + APE  T  K S  SDV+SFG+V  E+    
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 232
Query: 551 RKPINPKA---------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
            K  +P A          QGQ+ +   +  L  NG+L     PR     DG   E  MI+
Sbjct: 233 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL-----PRP----DGCPDEIYMIM 283
Query: 602 GLWCAHPDENLRPSIRQV 619
              C + + N RPS R +
Sbjct: 284 -TECWNNNVNQRPSFRDL 300

>pdb|1LOA|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus Ochrus Isolectin I With Glucose And Mannose: Fine Specificity Of The Monosaccharide-Binding Site Length = 181

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 95/181 (52%), Gaps = 12/181 (6%)
Query: 36  TFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFT 95
           +F+ T F P   + I     Y    R+    A R T GRA Y+  + +WD  TGN+ +F 
Sbjct: 5   SFSITKFGPDQQNLIFQGDGYTTKERLTLTKAVRNTVGRALYSSPIHIWDSKTGNVANFV 64
Query: 96  THFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGL--TKDNEPLNSSIPFVAVE 153
           T F+FVID+ NS   ADG  FF+AP  +K  T  GGG  G+  +KD +  + +   VAVE
Sbjct: 65  TSFTFVIDAPNSYNVADGFTFFIAPVDTKPQT--GGGYLGVFNSKDYDKTSQT---VAVE 119
Query: 154 FDVYVNS-WDPTFS--HVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNLSVAF 210
           FD + N+ WDP+    H+GID+                 G+     I++N++T+ L+V+ 
Sbjct: 120 FDTFYNTAWDPSNGDRHIGIDV--NSIKSINTKSWALQNGKEANVVIAFNAATNVLTVSL 177
Query: 211 T 211
           T
Sbjct: 178 T 178

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 27/258 (10%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T   +AVK++   +++ ++++  E++I+  L+H N+V+  G C+   ++ L L+ E++P 
Sbjct: 56  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 115
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GSL  +L K    +      +    +  G+ YL  +     +HRD+ + NI++++    K
Sbjct: 116 GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVK 172
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACG 550
           IGDFGL +++   K        G   + + APE  T  K S  SDV+SFG+V  E+    
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 232
Query: 551 RKPINPKA---------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
            K  +P A          QGQ+ +   +  L  NG+L     PR     DG   E  MI+
Sbjct: 233 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL-----PRP----DGCPDEIYMIM 283
Query: 602 GLWCAHPDENLRPSIRQV 619
              C + + N RPS R +
Sbjct: 284 -TECWNNNVNQRPSFRDL 300

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 130/255 (50%), Gaps = 31/255 (12%)
Query: 379 YIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           ++A+K +  G +++  +++ SE  I+ +  H N++ L G   +   ++++ EFM NGSLD
Sbjct: 37  FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 96
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
           S L + +   T      + + +A+G+ YL    +   VHR + + NI+++SN   K+ DF
Sbjct: 97  SFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRALAARNILVNSNLVCKVSDF 153
Query: 498 GLARLVEH--AKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEI-ACGRK 552
           GL+R +E   +  + T+ L G +   + APE     K +  SDV+S+GIV  E+ + G +
Sbjct: 154 GLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER 213
Query: 553 PINPKAPQGQVSLLQWVWDLYGNGKLLEAV--DPRLCRDFDG-QQIERLMIVGLWCAHPD 609
           P                WD+  N  ++ A+  D RL    D    + +LM   L C   D
Sbjct: 214 P---------------YWDMT-NQDVINAIEQDYRLPPPMDCPSALHQLM---LDCWQKD 254
Query: 610 ENLRPSIRQVIHVLN 624
            N RP   Q+++ L+
Sbjct: 255 RNHRPKFGQIVNTLD 269

>pdb|1LOF|C Chain C, X-Ray Structure Of A Biantennary Octasaccharide-Lectin Complex At 2.3 Angstroms Resolution Length = 181

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 95/181 (52%), Gaps = 12/181 (6%)
Query: 36  TFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFT 95
           +F+ T F P   + I     Y    R+    A R T GRA Y+  + +WD  TGN+ +F 
Sbjct: 5   SFSITKFGPDQQNLIFQGDGYTTKERLTLTKAVRNTVGRALYSSPIHIWDSKTGNVANFV 64
Query: 96  THFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGL--TKDNEPLNSSIPFVAVE 153
           T F+FVID+ NS   ADG  FF+AP  +K  T  GGG  G+  +KD +  + +   VAVE
Sbjct: 65  TSFTFVIDAPNSYNVADGFTFFIAPVDTKPQT--GGGYLGVFNSKDYDKTSQT---VAVE 119
Query: 154 FDVYVNS-WDPTFS--HVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNLSVAF 210
           FD + N+ WDP+    H+GID+                 G+     I++N++T+ L+V+ 
Sbjct: 120 FDTFYNTAWDPSNGDRHIGIDV--NSIKSINTKSWKLQNGKEANVVIAFNAATNVLTVSL 177
Query: 211 T 211
           T
Sbjct: 178 T 178

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 93/168 (55%), Gaps = 4/168 (2%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K + +G+    +++  E +++ +L H  LVQL G C E+  + LV+EFM +G L  +
Sbjct: 34  VAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
           L  +  L   E    +  D+  G+ YL+   E  V+HRD+ + N ++  N   K+ DFG+
Sbjct: 93  LRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGM 149
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
            R V   + + +T     + + +PE  +  + S +SDV+SFG++  E+
Sbjct: 150 TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 123/249 (49%), Gaps = 23/249 (9%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++ SE  I+ +  H N+++L G     +  ++V E+M NGSLD+
Sbjct: 80  VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L   +   T      + + + +G+ YL +      VHRD+ + N+++DSN   K+ DFG
Sbjct: 140 FLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 499 LARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           L+R++E    +  T   G   + + APE       S  SDV+SFG+V  E+ A G +P  
Sbjct: 197 LSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPS 615
               +  +S ++        G  L A  P  C       + +LM   L C H D   RP 
Sbjct: 257 NMTNRDVISSVE-------EGYRLPA--PMGC----PHALHQLM---LDCWHKDRAQRPR 300
Query: 616 IRQVIHVLN 624
             Q++ VL+
Sbjct: 301 FSQIVSVLD 309

>pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181

Iteration: 1
 Score = 95.9 bits (237), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 93/189 (49%), Gaps = 23/189 (12%)
Query: 36  TFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFT 95
           +F+ T F P   + I     Y    R+    A R T GRA Y+  + +WD  TGN+ +F 
Sbjct: 5   SFSITKFGPDQPNLIFQGDGYTTKERLTLTKAVRNTVGRALYSSPIHIWDSKTGNVANFV 64
Query: 96  THFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGL--TKDNEPLNSSIPFVAVE 153
           T F+FVID+ NS   ADG  FF+AP  +K  T  GGG  G+  +KD +  + +   VAVE
Sbjct: 65  TSFTFVIDAPNSYNVADGFTFFIAPVDTKPQT--GGGYLGVFNSKDYDKTSQT---VAVE 119
Query: 154 FDVYVNS-WDPTFS--HVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNLSVAF 210
           FD + N+ WDP+    H+GID+                     ++W   N    N+ +AF
Sbjct: 120 FDTFYNTAWDPSNGDRHIGIDVNSIKSI-------------NTKSWALQNGKEANVVIAF 166
Query: 211 TGFRNNLVV 219
            G  N L V
Sbjct: 167 NGATNVLTV 175

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 123/249 (49%), Gaps = 23/249 (9%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++ SE  I+ +  H N+++L G     +  ++V E+M NGSLD+
Sbjct: 80  VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L   +   T      + + + +G+ YL +      VHRD+ + N+++DSN   K+ DFG
Sbjct: 140 FLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 499 LARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           L+R++E    +  T   G   + + APE       S  SDV+SFG+V  E+ A G +P  
Sbjct: 197 LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPS 615
               +  +S ++        G  L A  P  C       + +LM   L C H D   RP 
Sbjct: 257 NMTNRDVISSVE-------EGYRLPA--PMGC----PHALHQLM---LDCWHKDRAQRPR 300
Query: 616 IRQVIHVLN 624
             Q++ VL+
Sbjct: 301 FSQIVSVLD 309

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 127/252 (50%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++  E  I+ +  H N+V L G     K +++V EFM NG+LD+
Sbjct: 74  VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDA 133
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K +   T      + + +A+G+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 134 FLRKHDGQFTVIQLVGMLRGIAAGMRYLA---DMGYVHRDLAARNILVNSNLVCKVSDFG 190
Query: 499 LARLVEHAKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           L+R++E    +  T   G +   + APE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 191 LSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP-- 248
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDGQQ-IERLMIVGLWCAHPDENL 612
                         WD+  N  +++A++   RL    D    + +LM   L C   +   
Sbjct: 249 -------------YWDM-SNQDVIKAIEEGYRLPAPMDCPAGLHQLM---LDCWQKERAE 291
Query: 613 RPSIRQVIHVLN 624
           RP   Q++ +L+
Sbjct: 292 RPKFEQIVGILD 303

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 27/258 (10%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T   +AVK++   +++ ++++  E++I+  L+H N+V+  G C+   ++ L L+ E++P 
Sbjct: 38  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 97
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GSL  +L K    +      +    +  G+ YL     +  +HRD+ + NI++++    K
Sbjct: 98  GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVK 154
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACG 550
           IGDFGL +++   K        G   + + APE  T  K S  SDV+SFG+V  E+    
Sbjct: 155 IGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
Query: 551 RKPINPKA---------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
            K  +P A          QGQ+ +   +  L  NG+L     PR     DG   E  MI+
Sbjct: 215 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL-----PRP----DGCPDEIYMIM 265
Query: 602 GLWCAHPDENLRPSIRQV 619
              C + + N RPS R +
Sbjct: 266 -TECWNNNVNQRPSFRDL 282

>pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181

Iteration: 1
 Score = 95.1 bits (235), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 94/181 (51%), Gaps = 12/181 (6%)
Query: 36  TFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFT 95
           +F+ T F P   + I     Y    R+    A R T GRA Y+  + +WD  TGN+ +F 
Sbjct: 5   SFSITKFGPDQPNLIFQGDGYTTKERLTLTKAVRNTVGRALYSSPIHIWDSKTGNVANFV 64
Query: 96  THFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGL--TKDNEPLNSSIPFVAVE 153
           T F+FVID+ NS   ADG  FF+AP  +K  T  GGG  G+  +KD +  + +   VAVE
Sbjct: 65  TSFTFVIDAPNSYNVADGFTFFIAPVDTKPQT--GGGYLGVFNSKDYDKTSQT---VAVE 119
Query: 154 FDVYVNS-WDPTFS--HVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNLSVAF 210
           FD + N+ WDP+    H+GID+                 G+     I++N +T+ L+V+ 
Sbjct: 120 FDTFYNTAWDPSNGDRHIGIDV--NSIKSINTKSWKLQNGKEANVVIAFNGATNVLTVSL 177
Query: 211 T 211
           T
Sbjct: 178 T 178

>pdb|2LAL|A Chain A, Crystal Structure Determination And Refinement At 2.3 Angstroms Resolution Of The Lentil Lectin Length = 181

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 36  TFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFT 95
           +F+ T FSP   + I     Y    ++    A + T GRA Y+  + +WD+ TGN+ +F 
Sbjct: 5   SFSITKFSPDQQNLIFQGDGYTTKGKLTLTKAVKSTVGRALYSTPIHIWDRDTGNVANFV 64
Query: 96  THFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFD 155
           T F+FVID+ +S   ADG  FF+AP  +K  T  GGG  G+    E  + +   VAVEFD
Sbjct: 65  TSFTFVIDAPSSYNVADGFTFFIAPVDTKPQT--GGGYLGVFNSKE-YDKTSQTVAVEFD 121
Query: 156 VYVN-SWDPTFS--HVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNLSVAFT 211
            + N +WDP+    H+GID+                 G R    I++N++T+ L+V  T
Sbjct: 122 TFYNAAWDPSNKERHIGIDV--NSIKSVNTKSWNLQNGERANVVIAFNAATNVLTVTLT 178

>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With Methyl-Alpha-D-Galactose (Monoclinic Form) Length = 238

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 113/244 (46%), Gaps = 27/244 (11%)
Query: 36  TFNYTSFSPQYDDNITYERAYPDSNRVIQL--------PANRETAGRATYNQSMRLWDKA 87
           +FN+  F     +     +A   SN V++L        P  + T GRA Y + +++WD  
Sbjct: 4   SFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKST-GRALYAEPIKIWDST 62
Query: 88  TGNLTDFTTHFSFVIDSRNSSY--YADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNS 145
           TGN+  F T FSF I ++  +Y   ADGL FF+ P  S  P  + GG+ G+ K  E  N+
Sbjct: 63  TGNVASFETRFSFNI-TQPYAYPEPADGLTFFMVPPNS--PQGEDGGNLGVFKPPEGDNA 119
Query: 146 SIPFVAVEFDVYVNSWDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHN 205
                AVEFD + N+WDP   H+GID+                 G      I Y+S T  
Sbjct: 120 ----FAVEFDTFQNTWDPQVPHIGIDV--NSIVSSKTLHFQLENGGVANVVIKYDSPTKI 173
Query: 206 LSVAFTGFRNNLVVMQGLDYQVDLRQHLP--EFVTFGFSMATGVD---FAIFSIYSWEFN 260
           L+V      +++  +  L   VDL+Q  P  E+V  G S  TG          I SW F 
Sbjct: 174 LNVVLA--FHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFT 231
Query: 261 SSLE 264
           SSL+
Sbjct: 232 SSLQ 235

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 130/267 (48%), Gaps = 52/267 (19%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL--- 436
           +AVK +   S    K++  E ++++ L+H ++V+  G C E   L++V+E+M +G L   
Sbjct: 46  VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 105
Query: 437 ------DSHLFKEN---SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD 487
                 D+ L  E    + LT      IAQ +A+G++YL     Q  VHRD+ + N ++ 
Sbjct: 106 LRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVG 162
Query: 488 SNFNAKIGDFGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVA 544
            N   KIGDFG++R V   ++ +    T+L   + +M PE     K + ESDV+S G+V 
Sbjct: 163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP--IRWMPPESIMYRKFTTESDVWSLGVVL 220
Query: 545 LEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD-------PRLCRDFDGQQIE 596
            EI   G++P                W    N +++E +        PR C     Q++ 
Sbjct: 221 WEIFTYGKQP----------------WYQLSNNEVIECITQGRVLQRPRTC----PQEVY 260
Query: 597 RLMIVGLWCAHPDENLRPSIRQVIHVL 623
            LM+ G W   P  ++R +I+  IH L
Sbjct: 261 ELML-GCWQREP--HMRKNIKG-IHTL 283

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 129/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G + +  +++ SE  I+ +  H N++ L G   + K ++++ E+M NGSLD+
Sbjct: 60  VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K +   T      + + + SG+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 120 FLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFG 176
Query: 499 LARLVEHAKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           ++R++E    +  T   G +   + APE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 177 MSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-- 234
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDGQ-QIERLMIVGLWCAHPDENL 612
                         WD+  N  +++A++   RL    D    + +LM   L C   + + 
Sbjct: 235 -------------YWDM-SNQDVIKAIEEGYRLPPPMDCPIALHQLM---LDCWQKERSD 277
Query: 613 RPSIRQVIHVLN 624
           RP   Q++++L+
Sbjct: 278 RPKFGQIVNMLD 289

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 127/258 (49%), Gaps = 27/258 (10%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T   +AVK++   +++ ++++  E++I+  L+H N+V+  G C+   ++ L L+ E++P 
Sbjct: 39  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 98
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GSL  +L K    +      +    +  G+ YL     +  +HR++ + NI++++    K
Sbjct: 99  GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVK 155
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACG 550
           IGDFGL +++   K        G   + + APE  T  K S  SDV+SFG+V  E+    
Sbjct: 156 IGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 215
Query: 551 RKPINPKA---------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
            K  +P A          QGQ+ +   +  L  NG+L     PR     DG   E  MI+
Sbjct: 216 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL-----PRP----DGCPDEIYMIM 266
Query: 602 GLWCAHPDENLRPSIRQV 619
              C + + N RPS R +
Sbjct: 267 -TECWNNNVNQRPSFRDL 283

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 126/258 (48%), Gaps = 27/258 (10%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T   +AVK++   +++ ++++  E++I+  L+H N+V+  G C+   ++ L L+ E++P 
Sbjct: 41  TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 100
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GSL  +L      +      +    +  G+ YL     +  +HRD+ + NI++++    K
Sbjct: 101 GSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVK 157
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACG 550
           IGDFGL +++   K        G   + + APE  T  K S  SDV+SFG+V  E+    
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
Query: 551 RKPINPKA---------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
            K  +P A          QGQ+ +   +  L  NG+L     PR     DG   E  MI+
Sbjct: 218 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL-----PRP----DGCPDEIYMIM 268
Query: 602 GLWCAHPDENLRPSIRQV 619
              C + + N RPS R +
Sbjct: 269 -TECWNNNVNQRPSFRDL 285

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 21/247 (8%)
Query: 380 IAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK   V+  + Q ++ + +EV ++ + RH N++  +G+   K +L +V ++    SL 
Sbjct: 37  VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLY 95
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
            HL    +    +    IA+  A G+ YL     + ++HRD+KS+NI L  +   KIGDF
Sbjct: 96  HHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDF 152
Query: 498 GLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKA---SKESDVYSFGIVALEIACGRKP 553
           GLA +     GS Q   L+G++ +MAPE      +   S +SDVY+FGIV  E+  G+ P
Sbjct: 153 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
Query: 554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR 613
            +    + Q+       ++ G G L  + D    R    ++++RLM     C     + R
Sbjct: 213 YSNINNRDQII------EMVGRGSL--SPDLSKVRSNCPKRMKRLMAE---CLKKKRDER 261
Query: 614 PSIRQVI 620
           PS  +++
Sbjct: 262 PSFPRIL 268

>pdb|1FX5|A Chain A, Crystal Structure Analysis Of Ulex Europaeus Lectin I Length = 242

Iteration: 1
 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 70  ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVID-SRNSSYYADGLAFFLAPQGSKIPTN 128
           ET G A Y   + +W+  TG L  F T FSF ++ S N     DGL FFLAP  S  P  
Sbjct: 44  ETGGIARYIAPIHIWNCNTGELASFITSFSFFMETSANPKAATDGLTFFLAPPDS--PLR 101
Query: 129 KGGGSFGLTKDNEPLNSSIPFVAVEFDVY---VNSWDPTFSHVGIDIXXXXXXXXXXXXX 185
           + GG FGL  D +  +SS   VAVEFD     VN WDP F H+GID+             
Sbjct: 102 RAGGYFGLFNDTK-CDSSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERWNK 160
Query: 186 XXXXGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMAT 245
                      I Y +S+  L+ + T   +   +   +   VDL++ LPE+V+ GFS +T
Sbjct: 161 RYGLNNVANVEIIYEASSKTLTASLTYPSDQTSI--SVTSIVDLKEILPEWVSVGFSGST 218
Query: 246 GVDF-AIFSIYSWEFNSSL 263
            +   A   + +W F S+ 
Sbjct: 219 YIGRQATHEVLNWYFTSTF 237

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 17/196 (8%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           RET   + +K + +  ++  + +  EVK++  L H N+++ +G  ++ K L  + E++  
Sbjct: 32  RETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKG 91
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G+L   +   +S   W  R   A+D+ASG+ YL       ++HRD+ S N ++  N N  
Sbjct: 92  GTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVV 148
Query: 494 IGDFGLARLVEHAKG-------------SQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           + DFGLARL+   K               +   + G   +MAPE        ++ DV+SF
Sbjct: 149 VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSF 208
Query: 541 GIVALEIACGRKPINP 556
           GIV  EI  GR   +P
Sbjct: 209 GIVLCEII-GRVNADP 223

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 129/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G +++  +++  E  I+ +  H N++ L G   + K +++V E+M NGSLD+
Sbjct: 53  VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K +   T      + + +++G+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 113 FLKKNDGQFTVIQLVGMLRGISAGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFG 169
Query: 499 LARLVEHAKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEIAC-GRKPIN 555
           L+R++E    +  T   G +   + APE     K +  SDV+S+GIV  E+   G +P  
Sbjct: 170 LSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP-- 227
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDG-QQIERLMIVGLWCAHPDENL 612
                         W++  N  +++AV+   RL    D    + +LM   L C   + N 
Sbjct: 228 -------------YWEMT-NQDVIKAVEEGYRLPSPMDCPAALYQLM---LDCWQKERNS 270
Query: 613 RPSIRQVIHVLN 624
           RP   +++++L+
Sbjct: 271 RPKFDEIVNMLD 282

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 129/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G + +  +++ SE  I+ +  H N++ L G   + K ++++ E+M NGSLD+
Sbjct: 45  VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K +   T      + + + SG+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 105 FLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFG 161
Query: 499 LARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           ++R++E    +  T   G   + + APE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 162 MSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-- 219
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDGQ-QIERLMIVGLWCAHPDENL 612
                         WD+  N  +++A++   RL    D    + +LM   L C   + + 
Sbjct: 220 -------------YWDM-SNQDVIKAIEEGYRLPPPMDCPIALHQLM---LDCWQKERSD 262
Query: 613 RPSIRQVIHVLN 624
           RP   Q++++L+
Sbjct: 263 RPKFGQIVNMLD 274

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 129/252 (51%), Gaps = 29/252 (11%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K +  G + +  +++ SE  I+ +  H N++ L G   + K ++++ E+M NGSLD+
Sbjct: 39  VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L K +   T      + + + SG+ YL    +   VHRD+ + NI+++SN   K+ DFG
Sbjct: 99  FLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFG 155
Query: 499 LARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPIN 555
           ++R++E    +  T   G   + + APE     K +  SDV+S+GIV  E+ + G +P  
Sbjct: 156 MSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-- 213
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDGQ-QIERLMIVGLWCAHPDENL 612
                         WD+  N  +++A++   RL    D    + +LM   L C   + + 
Sbjct: 214 -------------YWDM-SNQDVIKAIEEGYRLPPPMDCPIALHQLM---LDCWQKERSD 256
Query: 613 RPSIRQVIHVLN 624
           RP   Q++++L+
Sbjct: 257 RPKFGQIVNMLD 268

>pdb|1OFS|A Chain A, Pea Lectin-sucrose Complex Length = 187

Iteration: 1
 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 92/179 (51%), Gaps = 8/179 (4%)
Query: 36  TFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFT 95
           +F  T FSP   + I     Y    ++    A + T GRA Y+  + +WD+ TGN+ +F 
Sbjct: 5   SFLITKFSPDQQNLIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANFV 64
Query: 96  THFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFD 155
           T F+FVI++ NS   ADG  FF+AP  +K  T  GGG  G+    E  + +   VAVEFD
Sbjct: 65  TSFTFVINAPNSYNVADGFTFFIAPVDTKPQT--GGGYLGVFNSAE-YDKTTQTVAVEFD 121
Query: 156 VYVN-SWDPTF--SHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNLSVAFT 211
            + N +WDP+    H+GID+                 G      I++N++T+ L+V+ T
Sbjct: 122 TFYNAAWDPSNRDRHIGIDV--NSIKSVNTKSWKLQNGEEANVVIAFNAATNVLTVSLT 178

>pdb|1RIN|A Chain A, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside Complex At 2.6 Angstroms Resolution Length = 180

Iteration: 1
 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 92/179 (51%), Gaps = 8/179 (4%)
Query: 36  TFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFT 95
           +F  T FSP   + I     Y    ++    A + T GRA Y+  + +WD+ TGN+ +F 
Sbjct: 5   SFLITKFSPDQQNLIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANFV 64
Query: 96  THFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFD 155
           T F+FVI++ NS   ADG  FF+AP  +K  T  GGG  G+    E  + +   VAVEFD
Sbjct: 65  TSFTFVINAPNSYNVADGFTFFIAPVDTKPQT--GGGYLGVFNSAE-YDKTTETVAVEFD 121
Query: 156 VYVN-SWDPTF--SHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNLSVAFT 211
            + N +WDP+    H+GID+                 G      I++N++T+ L+V+ T
Sbjct: 122 TFYNAAWDPSNRDRHIGIDV--NSIKSVNTKSWKLQNGEEANVVIAFNAATNVLTVSLT 178

>pdb|2LTN|A Chain A, Design, Expression, And Crystallization Of Recombinant Lectin From The Garden Pea (Pisum Sativum) Length = 181

Iteration: 1
 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 92/179 (51%), Gaps = 8/179 (4%)
Query: 36  TFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFT 95
           +F  T FSP   + I     Y    ++    A + T GRA Y+  + +WD+ TGN+ +F 
Sbjct: 5   SFLITKFSPDQQNLIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANFV 64
Query: 96  THFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFD 155
           T F+FVI++ NS   ADG  FF+AP  +K  T  GGG  G+    E  + +   VAVEFD
Sbjct: 65  TSFTFVINAPNSYNVADGFTFFIAPVDTKPQT--GGGYLGVFNSAE-YDKTTQTVAVEFD 121
Query: 156 VYVN-SWDPTF--SHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNLSVAFT 211
            + N +WDP+    H+GID+                 G      I++N++T+ L+V+ T
Sbjct: 122 TFYNAAWDPSNRDRHIGIDV--NSIKSVNTKSWKLQNGEEANVVIAFNAATNVLTVSLT 178

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 92.4 bits (228), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 23/264 (8%)
Query: 338 GPKRFPYKEL-ALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQG---- 392
           G   FP   L  LA N+   ++++              +  S +A+K +  G  +G    
Sbjct: 4   GGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 393 ---IKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTW 449
               +E+  EV I+S L H N+V+L G  H    +  V EF+P G L   L  +   + W
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKW 121
Query: 450 EFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-----NFNAKIGDFGLARLVE 504
             + ++  D+A G+ Y+Q +    +VHRD++S NI L S        AK+ DFGL++   
Sbjct: 122 SVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV 180
Query: 505 HAKGSQTTVLAGTMGYMAPECATTGKAS--KESDVYSFGIVALEIACGRKPINPKAPQGQ 562
           H+     + L G   +MAPE     + S  +++D YSF ++   I  G  P + +   G+
Sbjct: 181 HS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-EYSYGK 235
Query: 563 VSLLQWVWDLYGNGKLLEAVDPRL 586
           +  +  + +      + E   PRL
Sbjct: 236 IKFINMIREEGLRPTIPEDCPPRL 259

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 92.0 bits (227), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 21/247 (8%)
Query: 380 IAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK   V+  + Q ++ + +EV ++ + RH N++  +G+   K +L +V ++    SL 
Sbjct: 49  VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLY 107
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
            HL    +    +    IA+  A G+ YL     + ++HRD+KS+NI L  +   KIGDF
Sbjct: 108 HHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDF 164
Query: 498 GLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKA---SKESDVYSFGIVALEIACGRKP 553
           GLA       GS Q   L+G++ +MAPE      +   S +SDVY+FGIV  E+  G+ P
Sbjct: 165 GLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
Query: 554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR 613
            +    + Q+       ++ G G L  + D    R    ++++RLM     C     + R
Sbjct: 225 YSNINNRDQII------EMVGRGSL--SPDLSKVRSNCPKRMKRLMAE---CLKKKRDER 273
Query: 614 PSIRQVI 620
           PS  +++
Sbjct: 274 PSFPRIL 280

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 105/190 (55%), Gaps = 11/190 (5%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK + QGS      + +E  ++ +L+H+ LV+L      ++ + ++ E+M NGSL
Sbjct: 37  HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL 94
Query: 437 DSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   + + LT      +A  +A G+ +++E   +  +HRD++++NI++    + KI 
Sbjct: 95  VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 151
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP- 553
           DFGLARL+E A+ +        + + APE    G  + +SDV+SFGI+  EI   GR P 
Sbjct: 152 DFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
Query: 554 ---INPKAPQ 560
               NP+  Q
Sbjct: 212 PGMTNPEVIQ 221

>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In Hexagonal Crystal Form Length = 255

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 121/255 (47%), Gaps = 23/255 (9%)
Query: 35  LTFNYTSFSPQYDDNITYE-RAYPDSNRVIQL--------PANRETAGRATYNQSMRLWD 85
           ++F+++ F P  +DN+T +  A    + V+QL        PA  ++ GR  Y + + +WD
Sbjct: 4   ISFSFSEFEPG-NDNLTLQGAALITQSGVLQLTKINQNGMPA-WDSTGRTLYAKPVHIWD 61
Query: 86  KATGNLTDFTTHFSFVIDSRNS-SYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN 144
             TG +  F T FSF I+   +    ADGL FF+ P  SK    +G G  G+  +N   +
Sbjct: 62  MTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSK--PAQGYGYLGIF-NNSKQD 118
Query: 145 SSIPFVAVEFDVYVNSWD-PTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSST 203
           +S   + VEFD + N WD P   H+GID+                 G+     I Y++S+
Sbjct: 119 NSYQTLGVEFDTFSNPWDPPQVPHIGIDV--NSIRSIKTQPFQLDNGQVANVVIKYDASS 176
Query: 204 HNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV--DFA-IFSIYSWEFN 260
             L        +  +    +   VD++Q LPE+V  G S ATG   D A    +YSW F 
Sbjct: 177 KILHAVLVYPSSGAIYT--IAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQ 234
Query: 261 SSLEMDDETTNPVSN 275
           +SL   ++   P SN
Sbjct: 235 ASLPETNDAVIPTSN 249

>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N- Acetylgalactosamine Length = 242

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 117/243 (48%), Gaps = 23/243 (9%)
Query: 35  LTFNYTSFSPQYDDNITYERA-YPDSNRVIQL--------PANRETAGRATYNQSMRLWD 85
           ++F+++ F P  +DN+T + A     + V+QL        PA  ++ GR  Y + + +WD
Sbjct: 4   ISFSFSEFEPG-NDNLTLQGASLITQSGVLQLTKINQNGMPA-WDSTGRTLYAKPVHIWD 61
Query: 86  KATGNLTDFTTHFSFVIDSRNS-SYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN 144
             TG +  F T FSF I+   +    ADGL FF+ P  SK    +GGG  G+  +N   +
Sbjct: 62  MTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSK--PAQGGGYLGIF-NNSKQD 118
Query: 145 SSIPFVAVEFDVYVNSWD-PTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSST 203
           +S   + VEFD + N WD P   H+GID+                 G+     I Y++S+
Sbjct: 119 NSYQTLGVEFDTFSNQWDPPQVPHIGIDV--NSIRSIKTQPFQLDNGQVANVVIKYDASS 176
Query: 204 HNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV--DFA-IFSIYSWEFN 260
             L        +  +    +   VD++Q LPE+V  G S ATG   D A    +YSW F 
Sbjct: 177 KILHAVLVYPSSGAIYT--IAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQ 234
Query: 261 SSL 263
           +SL
Sbjct: 235 ASL 237

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 127/253 (50%), Gaps = 31/253 (12%)
Query: 380 IAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +A+K +  G   KQ + ++  E  I+ +  H N+++L G   + K ++++ E+M NG+LD
Sbjct: 76  VAIKTLKAGYTEKQRV-DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALD 134
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
             L +++   +      + + +A+G+ YL        VHRD+ + NI+++SN   K+ DF
Sbjct: 135 KFLREKDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDF 191
Query: 498 GLARLVEHAKGSQTTVLAGTMG--YMAPECATTGKASKESDVYSFGIVALEIAC-GRKPI 554
           GL+R++E    +  T   G +   + APE  +  K +  SDV+SFGIV  E+   G +P 
Sbjct: 192 GLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP- 250
Query: 555 NPKAPQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDG-QQIERLMIVGLWCAHPDEN 611
                          W+L  N ++++A++   RL    D    I +LM   + C   +  
Sbjct: 251 --------------YWEL-SNHEVMKAINDGFRLPTPMDCPSAIYQLM---MQCWQQERA 292
Query: 612 LRPSIRQVIHVLN 624
            RP    ++ +L+
Sbjct: 293 RRPKFADIVSILD 305

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 97/180 (53%), Gaps = 10/180 (5%)
Query: 380 IAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK   V+  + Q ++ + +EV ++ + RH N++  +G+   K +L +V ++    SL 
Sbjct: 35  VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLY 93
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
            HL    +         IA+  A G+ YL     + ++HRD+KS+NI L  +   KIGDF
Sbjct: 94  HHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDF 150
Query: 498 GLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKA---SKESDVYSFGIVALEIACGRKP 553
           GLA +     GS Q   L+G++ +MAPE          S +SDVY+FGIV  E+  G+ P
Sbjct: 151 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 97/180 (53%), Gaps = 10/180 (5%)
Query: 380 IAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK   V+  + Q ++ + +EV ++ + RH N++  +G+   K +L +V ++    SL 
Sbjct: 33  VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLY 91
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
            HL    +         IA+  A G+ YL     + ++HRD+KS+NI L  +   KIGDF
Sbjct: 92  HHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDF 148
Query: 498 GLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKA---SKESDVYSFGIVALEIACGRKP 553
           GLA +     GS Q   L+G++ +MAPE          S +SDVY+FGIV  E+  G+ P
Sbjct: 149 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 97/180 (53%), Gaps = 10/180 (5%)
Query: 380 IAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK   V+  + Q ++ + +EV ++ + RH N++  +G+   K +L +V ++    SL 
Sbjct: 38  VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLY 96
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
            HL    +         IA+  A G+ YL     + ++HRD+KS+NI L  +   KIGDF
Sbjct: 97  HHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDF 153
Query: 498 GLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKA---SKESDVYSFGIVALEIACGRKP 553
           GLA +     GS Q   L+G++ +MAPE          S +SDVY+FGIV  E+  G+ P
Sbjct: 154 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 97/180 (53%), Gaps = 10/180 (5%)
Query: 380 IAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK   V+  + Q ++ + +EV ++ + RH N++  +G+   K +L +V ++    SL 
Sbjct: 38  VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLY 96
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
            HL    +         IA+  A G+ YL     + ++HRD+KS+NI L  +   KIGDF
Sbjct: 97  HHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDF 153
Query: 498 GLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKA---SKESDVYSFGIVALEIACGRKP 553
           GLA +     GS Q   L+G++ +MAPE          S +SDVY+FGIV  E+  G+ P
Sbjct: 154 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 120/264 (45%), Gaps = 23/264 (8%)
Query: 338 GPKRFPYKEL-ALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQG---- 392
           G   FP   L  LA N+   ++++              +  S +A+K +  G  +G    
Sbjct: 4   GGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 393 ---IKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTW 449
               +E+  EV I+S L H N+V+L G  H    +  V EF+P G L   L  +   + W
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKW 121
Query: 450 EFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-----NFNAKIGDFGLARLVE 504
             + ++  D+A G+ Y+Q +    +VHRD++S NI L S        AK+ DFG ++   
Sbjct: 122 SVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSV 180
Query: 505 HAKGSQTTVLAGTMGYMAPECATTGKAS--KESDVYSFGIVALEIACGRKPINPKAPQGQ 562
           H+     + L G   +MAPE     + S  +++D YSF ++   I  G  P + +   G+
Sbjct: 181 HS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-EYSYGK 235
Query: 563 VSLLQWVWDLYGNGKLLEAVDPRL 586
           +  +  + +      + E   PRL
Sbjct: 236 IKFINMIREEGLRPTIPEDCPPRL 259

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 97/180 (53%), Gaps = 10/180 (5%)
Query: 380 IAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK   V+  + Q ++ + +EV ++ + RH N++  +G+   K +L +V ++    SL 
Sbjct: 60  VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLY 118
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
            HL    +         IA+  A G+ YL     + ++HRD+KS+NI L  +   KIGDF
Sbjct: 119 HHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDF 175
Query: 498 GLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKA---SKESDVYSFGIVALEIACGRKP 553
           GLA +     GS Q   L+G++ +MAPE          S +SDVY+FGIV  E+  G+ P
Sbjct: 176 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 97/180 (53%), Gaps = 10/180 (5%)
Query: 380 IAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK   V+  + Q ++ + +EV ++ + RH N++  +G+   K +L +V ++    SL 
Sbjct: 61  VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLY 119
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
            HL    +         IA+  A G+ YL     + ++HRD+KS+NI L  +   KIGDF
Sbjct: 120 HHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDF 176
Query: 498 GLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKA---SKESDVYSFGIVALEIACGRKP 553
           GLA +     GS Q   L+G++ +MAPE          S +SDVY+FGIV  E+  G+ P
Sbjct: 177 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 120/264 (45%), Gaps = 23/264 (8%)
Query: 338 GPKRFPYKEL-ALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQG---- 392
           G   FP   L  LA N+   ++++              +  S +A+K +  G  +G    
Sbjct: 4   GGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 393 ---IKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTW 449
               +E+  EV I+S L H N+V+L G  H    +  V EF+P G L   L  +   + W
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKW 121
Query: 450 EFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-----NFNAKIGDFGLARLVE 504
             + ++  D+A G+ Y+Q +    +VHRD++S NI L S        AK+ DF L++   
Sbjct: 122 SVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSV 180
Query: 505 HAKGSQTTVLAGTMGYMAPECATTGKAS--KESDVYSFGIVALEIACGRKPINPKAPQGQ 562
           H+     + L G   +MAPE     + S  +++D YSF ++   I  G  P + +   G+
Sbjct: 181 HS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-EYSYGK 235
Query: 563 VSLLQWVWDLYGNGKLLEAVDPRL 586
           +  +  + +      + E   PRL
Sbjct: 236 IKFINMIREEGLRPTIPEDCPPRL 259

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK + QGS      + +E  ++ +L+H+ LV+L      ++ + ++ E+M NGSL
Sbjct: 46  HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL 103
Query: 437 DSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   + + LT      +A  +A G+ +++E   +  +HRD++++NI++    + KI 
Sbjct: 104 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 160
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP- 553
           DFGLARL+E  + +        + + APE    G  + +SDV+SFGI+  EI   GR P 
Sbjct: 161 DFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 220
Query: 554 ---INPKAPQ 560
               NP+  Q
Sbjct: 221 PGMTNPEVIQ 230

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
            + +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  GSL
Sbjct: 32  TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IXIVTEYMSKGSL 89
Query: 437 DSHLFKENS-LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L  E    L       +A  +ASG+ Y++       VHRD++++NI++  N   K+ 
Sbjct: 90  LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVA 146
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           DFGLARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 147 DFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 205

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
            + +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  GSL
Sbjct: 42  TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSL 99
Query: 437 DSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L  E    L       +A  +ASG+ Y++       VHRD++++NI++  N   K+ 
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVA 156
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           DFGLARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 157 DFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 21/247 (8%)
Query: 380 IAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK   V+  + Q ++ + +EV ++ + RH N++  +G+     +L +V ++    SL 
Sbjct: 49  VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLY 107
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
            HL    +    +    IA+  A G+ YL     + ++HRD+KS+NI L  +   KIGDF
Sbjct: 108 HHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDF 164
Query: 498 GLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKA---SKESDVYSFGIVALEIACGRKP 553
           GLA       GS Q   L+G++ +MAPE      +   S +SDVY+FGIV  E+  G+ P
Sbjct: 165 GLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
Query: 554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR 613
            +    + Q+       ++ G G L  + D    R    ++++RLM     C     + R
Sbjct: 225 YSNINNRDQII------EMVGRGSL--SPDLSKVRSNCPKRMKRLMAE---CLKKKRDER 273
Query: 614 PSIRQVI 620
           PS  +++
Sbjct: 274 PSFPRIL 280

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK + QGS      + +E  ++ +L+H+ LV+L      ++ + ++ E+M NGSL
Sbjct: 39  HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL 96
Query: 437 DSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   + + LT      +A  +A G+ +++E   +  +HRD++++NI++    + KI 
Sbjct: 97  VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 153
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP- 553
           DFGLARL+E  + +        + + APE    G  + +SDV+SFGI+  EI   GR P 
Sbjct: 154 DFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 213
Query: 554 ---INPKAPQ 560
               NP+  Q
Sbjct: 214 PGMTNPEVIQ 223

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK + QGS      + +E  ++ +L+H+ LV+L      ++ + ++ E+M NGSL
Sbjct: 37  HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL 94
Query: 437 DSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   + + LT      +A  +A G+ +++E   +  +HRD++++NI++    + KI 
Sbjct: 95  VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 151
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP- 553
           DFGLARL+E  + +        + + APE    G  + +SDV+SFGI+  EI   GR P 
Sbjct: 152 DFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
Query: 554 ---INPKAPQ 560
               NP+  Q
Sbjct: 212 PGMTNPEVIQ 221

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK + QGS      + +E  ++ +L+H+ LV+L      ++ + ++ E+M NGSL
Sbjct: 38  HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL 95
Query: 437 DSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   + + LT      +A  +A G+ +++E   +  +HRD++++NI++    + KI 
Sbjct: 96  VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 152
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP- 553
           DFGLARL+E  + +        + + APE    G  + +SDV+SFGI+  EI   GR P 
Sbjct: 153 DFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 212
Query: 554 ---INPKAPQ 560
               NP+  Q
Sbjct: 213 PGMTNPEVIQ 222

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK + QGS      + +E  ++ +L+H+ LV+L      ++ + ++ E+M NGSL
Sbjct: 37  HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL 94
Query: 437 DSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   + + LT      +A  +A G+ +++E   +  +HRD++++NI++    + KI 
Sbjct: 95  VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 151
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP- 553
           DFGLARL+E  + +        + + APE    G  + +SDV+SFGI+  EI   GR P 
Sbjct: 152 DFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
Query: 554 ---INPKAPQ 560
               NP+  Q
Sbjct: 212 PGMTNPEVIQ 221

>pdb|2B7Y|A Chain A, Fava Bean Lectin-Glucose Complex Length = 182

Iteration: 1
 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 87/178 (48%), Gaps = 8/178 (4%)
Query: 36  TFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFT 95
           +F+   F P   + I     Y    ++    A + T GRA Y+  + +WD  TGN+ DFT
Sbjct: 6   SFSIPKFRPDQPNLIFQGGGYTTKEKLTLTKAVKNTVGRALYSLPIHIWDSETGNVADFT 65
Query: 96  THFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFD 155
           T F FVID+ N    ADG  FF+AP  +K  T  GGG  G+    +  + +   VAVEFD
Sbjct: 66  TTFIFVIDAPNGYNVADGFTFFIAPVDTKPQT--GGGYLGVFNGKD-YDKTAQTVAVEFD 122
Query: 156 VYVN-SWDPTFS--HVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNLSVAF 210
            + N +WDP+    H+GID+                 G      IS+N++T+ LSV  
Sbjct: 123 TFYNAAWDPSNGKRHIGIDV--NTIKSISTKSWNLQNGEEAHVAISFNATTNVLSVTL 178

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK + QGS      + +E  ++ +L+H+ LV+L      ++ + ++ E+M NGSL
Sbjct: 45  HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL 102
Query: 437 DSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   + + LT      +A  +A G+ +++E   +  +HRD++++NI++    + KI 
Sbjct: 103 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 159
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP- 553
           DFGLARL+E  + +        + + APE    G  + +SDV+SFGI+  EI   GR P 
Sbjct: 160 DFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 219
Query: 554 ---INPKAPQ 560
               NP+  Q
Sbjct: 220 PGMTNPEVIQ 229

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 7/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  GSL   
Sbjct: 294 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDF 351
Query: 440 LFKENS-LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L  E    L       +A  +ASG+ Y++       VHRD++++NI++  N   K+ DFG
Sbjct: 352 LKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFG 408
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           LARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 409 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK + QGS      + +E  ++ +L+H+ LV+L      ++ + ++ E+M NGSL
Sbjct: 43  HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL 100
Query: 437 DSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   + + LT      +A  +A G+ +++E   +  +HRD++++NI++    + KI 
Sbjct: 101 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 157
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP- 553
           DFGLARL+E  + +        + + APE    G  + +SDV+SFGI+  EI   GR P 
Sbjct: 158 DFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
Query: 554 ---INPKAPQ 560
               NP+  Q
Sbjct: 218 PGMTNPEVIQ 227

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 7/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  GSL   
Sbjct: 211 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDF 268
Query: 440 LFKENS-LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L  E    L       +A  +ASG+ Y++       VHRD++++NI++  N   K+ DFG
Sbjct: 269 LKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFG 325
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           LARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 326 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 130/264 (49%), Gaps = 37/264 (14%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK +   +    K++  E ++++ L+H ++V+  G C +   L++V+E+M +G L+  
Sbjct: 48  VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 107
Query: 440 L---------------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           L                +    L       IA  +ASG++YL     Q  VHRD+ + N 
Sbjct: 108 LRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNC 164
Query: 485 MLDSNFNAKIGDFGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFG 541
           ++ +N   KIGDFG++R V   ++ +    T+L   + +M PE     K + ESDV+SFG
Sbjct: 165 LVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP--IRWMPPESIMYRKFTTESDVWSFG 222
Query: 542 IVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
           ++  EI         K P  Q+S  + V +    G++LE   PR+C     +++  +M+ 
Sbjct: 223 VILWEIFT-----YGKQPWFQLSNTE-VIECITQGRVLER--PRVC----PKEVYDVML- 269
Query: 602 GLWCAHPDENLR-PSIRQVIHVLN 624
           G W   P + L    I +++H L 
Sbjct: 270 GCWQREPQQRLNIKEIYKILHALG 293

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 7/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  GSL   
Sbjct: 211 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDF 268
Query: 440 LFKENS-LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L  E    L       +A  +ASG+ Y++       VHRD++++NI++  N   K+ DFG
Sbjct: 269 LKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFG 325
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           LARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 326 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 7/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  GSL   
Sbjct: 36  VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDF 93
Query: 440 LFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L  E    L       +A  +ASG+ Y++       VHRD++++NI++  N   K+ DFG
Sbjct: 94  LKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFG 150
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           LARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 151 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 206

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 7/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  GSL   
Sbjct: 38  VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDF 95
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L  E    L       +A  +ASG+ Y++       VHRD++++NI++  N   K+ DFG
Sbjct: 96  LKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFG 152
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           LARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 153 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 208

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 7/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  GSL   
Sbjct: 34  VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDF 91
Query: 440 LFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L  E    L       +A  +ASG+ Y++       VHRD++++NI++  N   K+ DFG
Sbjct: 92  LKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFG 148
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           LARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 149 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 204

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK + QGS      + +E  ++ +L+H+ LV+L      ++ + ++ E+M NGSL
Sbjct: 42  HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL 99
Query: 437 DSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   + + LT      +A  +A G+ +++E   +  +HRD++++NI++    + KI 
Sbjct: 100 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 156
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP- 553
           DFGLARL+E  + +        + + APE    G  + +SDV+SFGI+  EI   GR P 
Sbjct: 157 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 216
Query: 554 ---INPKAPQ 560
               NP+  Q
Sbjct: 217 PGMTNPEVIQ 226

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 7/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  GSL   
Sbjct: 45  VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDF 102
Query: 440 LFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L  E    L       +A  +ASG+ Y++       VHRD++++NI++  N   K+ DFG
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFG 159
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           LARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 160 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK + QGS      + +E  ++ +L+H+ LV+L      ++ + ++ E+M NGSL
Sbjct: 37  HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL 94
Query: 437 DSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   + + LT      +A  +A G+ +++E   +  +HRD++++NI++    + KI 
Sbjct: 95  VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 151
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP- 553
           DFGLARL+E  + +        + + APE    G  + +SDV+SFGI+  EI   GR P 
Sbjct: 152 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
Query: 554 ---INPKAPQ 560
               NP+  Q
Sbjct: 212 PGMTNPEVIQ 221

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK + QGS      + +E  ++ +L+H+ LV+L      ++ + ++ E+M NGSL
Sbjct: 43  HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL 100
Query: 437 DSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   + + LT      +A  +A G+ +++E   +  +HRD++++NI++    + KI 
Sbjct: 101 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 157
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP- 553
           DFGLARL+E  + +        + + APE    G  + +SDV+SFGI+  EI   GR P 
Sbjct: 158 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
Query: 554 ---INPKAPQ 560
               NP+  Q
Sbjct: 218 PGMTNPEVIQ 227

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 7/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  GSL   
Sbjct: 45  VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDF 102
Query: 440 LFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L  E    L       +A  +ASG+ Y++       VHRD++++NI++  N   K+ DFG
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFG 159
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           LARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 160 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 7/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  GSL   
Sbjct: 211 VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVGEYMSKGSLLDF 268
Query: 440 LFKENS-LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L  E    L       +A  +ASG+ Y++       VHRD++++NI++  N   K+ DFG
Sbjct: 269 LKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFG 325
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           LARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 326 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK + QGS      + +E  ++ +L+H+ LV+L      ++ + ++ E+M NGSL
Sbjct: 47  HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL 104
Query: 437 DSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   + + LT      +A  +A G+ +++E   +  +HRD++++NI++    + KI 
Sbjct: 105 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 161
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP- 553
           DFGLARL+E  + +        + + APE    G  + +SDV+SFGI+  EI   GR P 
Sbjct: 162 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 221
Query: 554 ---INPKAPQ 560
               NP+  Q
Sbjct: 222 PGMTNPEVIQ 231

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 20/195 (10%)
Query: 374 RETNSYIAVKRV--SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           R++   +A+K +  +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+
Sbjct: 34  RQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 93
Query: 431 MPNGSLDSHL-----FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
            P G++   L     F E    T+        +LA+ L Y      + V+HRDIK  N++
Sbjct: 94  APLGTVYRELQKLSRFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLL 144
Query: 486 LDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
           L SN   KI DFG +    HA  S+ T L GT+ Y+ PE        ++ D++S G++  
Sbjct: 145 LGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 201
Query: 546 EIACGRKPINPKAPQ 560
           E   G  P      Q
Sbjct: 202 EFLVGMPPFEAHTYQ 216

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK + QGS      + +E  ++ +L+H+ LV+L     ++  + ++ E+M NGSL
Sbjct: 32  HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSL 89
Query: 437 DSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   + + LT      +A  +A G+ +++E   +  +HRD++++NI++    + KI 
Sbjct: 90  VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 146
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP- 553
           DFGLARL+E  + +        + + APE    G  + +SDV+SFGI+  EI   GR P 
Sbjct: 147 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 206
Query: 554 ---INPKAPQ 560
               NP+  Q
Sbjct: 207 PGMTNPEVIQ 216

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 88.6 bits (218), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 10/180 (5%)
Query: 380 IAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK   V+  + Q ++ + +EV ++ + RH N++  +G+   K +L +V ++    SL 
Sbjct: 53  VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLY 111
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
            HL    +         IA+  A G+ YL     + ++HRD+KS+NI L  +   KIGDF
Sbjct: 112 HHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDF 168
Query: 498 GLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKA---SKESDVYSFGIVALEIACGRKP 553
           GLA       GS Q   L+G++ +MAPE          S +SDVY+FGIV  E+  G+ P
Sbjct: 169 GLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 88.6 bits (218), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 10/180 (5%)
Query: 380 IAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK   V+  + Q ++ + +EV ++ + RH N++  +G+   K +L +V ++    SL 
Sbjct: 33  VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLY 91
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
            HL    +         IA+  A G+ YL     + ++HRD+KS+NI L  +   KIGDF
Sbjct: 92  HHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDF 148
Query: 498 GLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKA---SKESDVYSFGIVALEIACGRKP 553
           GLA       GS Q   L+G++ +MAPE          S +SDVY+FGIV  E+  G+ P
Sbjct: 149 GLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208

>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin Length = 242

Iteration: 1
 Score = 88.6 bits (218), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 114/242 (47%), Gaps = 21/242 (8%)
Query: 35  LTFNYTSFSPQYDDNITYERAYPDSNRVIQL--------PANRETAGRATYNQSMRLWDK 86
           ++F+++ F P  +D      A    + V+QL        PA  ++ GR  Y + + +WD 
Sbjct: 4   ISFSFSEFEPGNNDLTLQGAAIITQSGVLQLTKINQNGMPA-WDSTGRTLYTKPVHIWDM 62
Query: 87  ATGNLTDFTTHFSFVIDSRNS-SYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNS 145
            TG +  F T FSF I+   +    ADGL FF+ P  SK    +G G  G+  +N   ++
Sbjct: 63  TTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSK--PAQGYGYLGVF-NNSKQDN 119
Query: 146 SIPFVAVEFDVYVNSWD-PTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTH 204
           S   +AVEFD + N WD P   H+GID+                 G+     I Y++S+ 
Sbjct: 120 SYQTLAVEFDTFSNPWDPPQVPHIGIDV--NSIRSIKTQPFQLDNGQVANVVIKYDASSK 177
Query: 205 NLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV--DFA-IFSIYSWEFNS 261
            L        +  +    +   VD++Q LPE+V  G S ATG   D A    +YSW F++
Sbjct: 178 ILLAVLVYPSSGAIYT--IAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFHA 235
Query: 262 SL 263
           SL
Sbjct: 236 SL 237

>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli Lectin In Complex With 2'-Alpha-L-Fucosyllactose Length = 239

Iteration: 1
 Score = 88.6 bits (218), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 23/243 (9%)
Query: 35  LTFNYTSFSPQYDDNITYE-RAYPDSNRVIQL--------PANRETAGRATYNQSMRLWD 85
           ++F+++ F P  +DN+T +  A    + V+QL        PA  ++ GR  Y + + +WD
Sbjct: 4   ISFSFSEFEPG-NDNLTLQGAALITQSGVLQLTKINQNGMPA-WDSTGRTLYTKPVHMWD 61
Query: 86  KATGNLTDFTTHFSFVIDSRNS-SYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN 144
             TG +  F T FSF I+   +    ADGL FF+ P  SK    +G G  G+  +N   +
Sbjct: 62  STTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSK--PAQGYGYLGVF-NNSKQD 118
Query: 145 SSIPFVAVEFDVYVNSWD-PTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSST 203
           +S   +AVEFD + N WD P   H+GID+                 G+     I Y++ +
Sbjct: 119 NSYQTLAVEFDTFSNPWDPPQVPHIGIDV--NSIRSIKTQPFQLDNGQVANVVIKYDAPS 176
Query: 204 HNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV--DFA-IFSIYSWEFN 260
             L V      +  +    +   VD++Q LP++V  G S ATG   D A    +YSW F 
Sbjct: 177 KILHVVLVYPSSGAIYT--IAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQ 234
Query: 261 SSL 263
           +SL
Sbjct: 235 ASL 237

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 10/180 (5%)
Query: 380 IAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK   V+  + Q ++ + +EV ++ + RH N++  +G+   K +L +V ++    SL 
Sbjct: 61  VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSLY 119
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
            HL    +         IA+  A G+ YL     + ++HRD+KS+NI L  +   KIGDF
Sbjct: 120 HHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDF 176
Query: 498 GLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKA---SKESDVYSFGIVALEIACGRKP 553
           GLA       GS Q   L+G++ +MAPE          S +SDVY+FGIV  E+  G+ P
Sbjct: 177 GLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236

>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal Free Form Length = 257

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 118/245 (48%), Gaps = 18/245 (7%)
Query: 32  ASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRE-------TAGRATYNQSMRLW 84
           + +++F + +F    +D+I ++     +   +QL    +       +AGRA Y+  ++LW
Sbjct: 2   SDSVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLW 61
Query: 85  DKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGL-TKDNEPL 143
           D  T ++  F T F+F +    +   ADGLAFFLAP  S +     G   GL  K     
Sbjct: 62  DNKTESVASFYTEFTFFLKITGNG-PADGLAFFLAPPDSDV--KDAGEYLGLFNKSTATQ 118
Query: 144 NSSIPFVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXX-XXXXXXXGRRNEAWISYN 200
            S    VAVEFD + N    +P++ H+GI++                  G+   A ISY+
Sbjct: 119 PSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKRWEDSDIFSGKIATARISYD 178
Query: 201 SSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD-FAIFSIYSWEF 259
            S   L+V  +    +  +   L + VD+RQ+LPE V  G S +TG + F    I SW F
Sbjct: 179 GSAEILTVVLSYPDGSDYI---LSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRF 235
Query: 260 NSSLE 264
           +S+L+
Sbjct: 236 SSNLQ 240

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 7/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  GSL   
Sbjct: 45  VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVCEYMSKGSLLDF 102
Query: 440 LFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L  E    L       +A  +ASG+ Y++       VHRD++++NI++  N   K+ DFG
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFG 159
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           LARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 160 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           N+ +A+K +  G+    + +  E +I+ +L+H  LVQL     E+  + +V E+M  GSL
Sbjct: 33  NTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAVVSEEP-IYIVTEYMNKGSL 90
Query: 437 DSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   E   L       +A  +A+G+ Y++       +HRD++S+NI++ +    KI 
Sbjct: 91  LDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGNGLICKIA 147
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           DFGLARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 148 DFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206

>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of Griffonia Simplicifolia Lectin-1 Length = 257

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 117/249 (46%), Gaps = 26/249 (10%)
Query: 32  ASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRE-------TAGRATYNQSMRLW 84
           + +++F + +F    +D+I ++     +   +QL    +       +AGRA Y+  ++LW
Sbjct: 2   SDSVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLW 61
Query: 85  DKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGL-TKDNEPL 143
           D  T ++  F T F+F +    +   ADGLAFFLAP  S +     G   GL  K     
Sbjct: 62  DNKTESVASFYTEFTFFLKITGNG-PADGLAFFLAPPDSDV--KDAGEYLGLFNKSTATQ 118
Query: 144 NSSIPFVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXX-XXXXXXXGRRNEAWISYN 200
            S    VAVEFD + N    +P++ H+GI++                  G+   A ISY+
Sbjct: 119 PSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKRWEDSDIFSGKIATARISYD 178
Query: 201 SSTHNLSVAFTGFRNNLVVMQGLDY----QVDLRQHLPEFVTFGFSMATGVD-FAIFSIY 255
            S   L+V        L    G DY     VD+RQ+LPE V  G S +TG + F    I 
Sbjct: 179 GSAEILTVV-------LSYPDGSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYIL 231
Query: 256 SWEFNSSLE 264
           SW F+S+L+
Sbjct: 232 SWRFSSNLQ 240

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 96/180 (53%), Gaps = 10/180 (5%)
Query: 380 IAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK   V+  + Q ++ + +EV ++ + RH N++  +G+     +L +V ++    SL 
Sbjct: 33  VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLY 91
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
            HL    +         IA+  A G+ YL     + ++HRD+KS+NI L  +   KIGDF
Sbjct: 92  HHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDF 148
Query: 498 GLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKA---SKESDVYSFGIVALEIACGRKP 553
           GLA +     GS Q   L+G++ +MAPE          S +SDVY+FGIV  E+  G+ P
Sbjct: 149 GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 90/175 (51%), Gaps = 21/175 (12%)
Query: 391 QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL----FKENSL 446
           Q I+    E K+ + L+H N++ L G C ++  L LV EF   G L+  L       + L
Sbjct: 48  QTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL 107
Query: 447 LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML--------DSNFNAKIGDFG 498
           + W      A  +A G+ YL +E    ++HRD+KSSNI++         SN   KI DFG
Sbjct: 108 VNW------AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           LAR  E  + ++ +  AG   +MAPE       SK SDV+S+G++  E+  G  P
Sbjct: 162 LAR--EWHRTTKMSA-AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213

>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With N-Actylgalactosamine Length = 239

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 116/243 (47%), Gaps = 23/243 (9%)
Query: 35  LTFNYTSFSPQYDDNITYE-RAYPDSNRVIQL--------PANRETAGRATYNQSMRLWD 85
           ++F+++ F P  +DN+T +  A    + V+QL        PA  ++ GR  Y + + +WD
Sbjct: 4   ISFSFSEFEPG-NDNLTLQGAALITQSGVLQLTKINQNGMPA-WDSTGRTLYAKPVHIWD 61
Query: 86  KATGNLTDFTTHFSFVIDSRNS-SYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN 144
             TG +  F T FSF I+   +    ADGL FF+ P  SK    +G G  G+  +N   +
Sbjct: 62  MTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSK--PAQGYGYLGIF-NNSKQD 118
Query: 145 SSIPFVAVEFDVYVNSWD-PTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSST 203
           +S   + VEFD + N WD P   H+GID+                 G+     I Y++S+
Sbjct: 119 NSYQTLGVEFDTFSNPWDPPQVPHIGIDV--NSIRSIKTQPFQLDNGQVANVVIKYDASS 176
Query: 204 HNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV--DFA-IFSIYSWEFN 260
             L        +  +    +   VD++Q LPE+V  G S ATG   D A    +YSW F 
Sbjct: 177 KILHAVLVYPSSGAIYT--IAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQ 234
Query: 261 SSL 263
           +SL
Sbjct: 235 ASL 237

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 7/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K +  G+    + +  E +++ ++RH  LVQL     E+  + +V E+M  GSL   
Sbjct: 45  VAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDF 102
Query: 440 LFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L  E    L       +A  +ASG+ Y++       VHRD++++NI++  N   K+ DFG
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFG 159
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           LARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 160 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 17/181 (9%)
Query: 374 RETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R  N+ +AVK   +     +K ++  E +I+ +  H N+V+L+G C +K+ + +V E + 
Sbjct: 136 RADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQ 195
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G   + L  E + L  +   ++  D A+G+ YL+    +C +HRD+ + N ++      
Sbjct: 196 GGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVL 252
Query: 493 KIGDFGLARLVEHAKGSQTTVLAGTMG-------YMAPECATTGKASKESDVYSFGIVAL 545
           KI DFG++R  E A G    V A + G       + APE    G+ S ESDV+SFGI+  
Sbjct: 253 KISDFGMSR--EEADG----VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLW 306
Query: 546 E 546
           E
Sbjct: 307 E 307

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 17/181 (9%)
Query: 374 RETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R  N+ +AVK   +     +K ++  E +I+ +  H N+V+L+G C +K+ + +V E + 
Sbjct: 136 RADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQ 195
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G   + L  E + L  +   ++  D A+G+ YL+    +C +HRD+ + N ++      
Sbjct: 196 GGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVL 252
Query: 493 KIGDFGLARLVEHAKGSQTTVLAGTMG-------YMAPECATTGKASKESDVYSFGIVAL 545
           KI DFG++R  E A G    V A + G       + APE    G+ S ESDV+SFGI+  
Sbjct: 253 KISDFGMSR--EEADG----VXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLW 306
Query: 546 E 546
           E
Sbjct: 307 E 307

>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron Lectin Length = 239

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 116/243 (47%), Gaps = 23/243 (9%)
Query: 35  LTFNYTSFSPQYDDNITYERA-YPDSNRVIQL--------PANRETAGRATYNQSMRLWD 85
           ++F+++ F P  +DN+T + A     + V+QL        PA  ++ GR  Y + + +WD
Sbjct: 4   ISFSFSEFEPG-NDNLTLQGASLITQSGVLQLTKINQNGMPA-WDSTGRTLYAKPVHIWD 61
Query: 86  KATGNLTDFTTHFSFVIDSRNS-SYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN 144
             TG +  F T FSF I+   +    ADGL FF+ P  SK    +G G  G+  +N   +
Sbjct: 62  MTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSK--PAQGYGYLGIF-NNSKQD 118
Query: 145 SSIPFVAVEFDVYVNSWD-PTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSST 203
           +S   + VEFD + N WD P   H+GID+                 G+     I Y++S+
Sbjct: 119 NSYQTLGVEFDTFSNQWDPPQVPHIGIDV--NSIRSIKTQPFQLDNGQVANVVIKYDASS 176
Query: 204 HNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV--DFA-IFSIYSWEFN 260
             L        +  +    +   VD++Q LPE+V  G S ATG   D A    +YSW F 
Sbjct: 177 KLLHAVLVYPSSGAIYT--IAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQ 234
Query: 261 SSL 263
           +SL
Sbjct: 235 ASL 237

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
            + +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  GSL
Sbjct: 39  TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSL 96
Query: 437 DSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L  E    L       ++  +ASG+ Y++       VHRD++++NI++  N   K+ 
Sbjct: 97  LDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVA 153
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           DFGLARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 154 DFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 7/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  GSL   
Sbjct: 45  VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDF 102
Query: 440 LFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L  E    L       +A  +ASG+ Y++       VHRD+ ++NI++  N   K+ DFG
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLAAANILVGENLVCKVADFG 159
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           LARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 160 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 7/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  GSL   
Sbjct: 212 VAIKTLKPGN-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDF 269
Query: 440 LFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L  E    L       +A  +ASG+ Y++       VHRD++++NI++  N   K+ DFG
Sbjct: 270 LKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFG 326
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           L RL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 327 LGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 382

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 7/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  G L   
Sbjct: 45  VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVMEYMSKGCLLDF 102
Query: 440 LFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L  E    L       +A  +ASG+ Y++       VHRD++++NI++  N   K+ DFG
Sbjct: 103 LKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFG 159
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           LARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 160 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 7/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  GSL   
Sbjct: 42  VAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDF 99
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L  E    L       ++  +ASG+ Y++       VHRD++++NI++  N   K+ DFG
Sbjct: 100 LKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFG 156
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           LARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 157 LARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 7/179 (3%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
            + +A+K +  G+    + +  E +++ +LRH  LVQL     E+  + +V E+M  G L
Sbjct: 42  TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGCL 99
Query: 437 DSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L  E    L       +A  +ASG+ Y++       VHRD++++NI++  N   K+ 
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVA 156
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           DFGLARL+E  + +        + + APE A  G+ + +SDV+SFGI+  E+   GR P
Sbjct: 157 DFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 376 TNSYIAVKRVS-QGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KELLLVYEFMP 432
           T   +AVK +  +     I +   E++I+  L H N+V+  G C E     + L+ EF+P
Sbjct: 49  TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 108
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
           +GSL  +L K  + +  + + K A  +  G+ YL        VHRD+ + N++++S    
Sbjct: 109 SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQV 165
Query: 493 KIGDFGLARLVEHAKGSQTTV--LAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
           KIGDFGL + +E  K   T        + + APEC    K    SDV+SFG+   E+
Sbjct: 166 KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 222

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK + QGS      + +E  ++ +L+H+ LV+L     ++  + ++ E+M NGSL
Sbjct: 33  HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSL 90
Query: 437 DSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   + + LT      +A  +A G+ +++E   +  +HR+++++NI++    + KI 
Sbjct: 91  VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRNLRAANILVSDTLSCKIA 147
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP- 553
           DFGLARL+E  + +        + + APE    G  + +SDV+SFGI+  EI   GR P 
Sbjct: 148 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 207
Query: 554 ---INPKAPQ 560
               NP+  Q
Sbjct: 208 PGMTNPEVIQ 217

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 376 TNSYIAVKRVS-QGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KELLLVYEFMP 432
           T   +AVK +  +     I +   E++I+  L H N+V+  G C E     + L+ EF+P
Sbjct: 37  TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 96
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
           +GSL  +L K  + +  + + K A  +  G+ YL        VHRD+ + N++++S    
Sbjct: 97  SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQV 153
Query: 493 KIGDFGLARLVEHAKGSQTTV--LAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
           KIGDFGL + +E  K   T        + + APEC    K    SDV+SFG+   E+
Sbjct: 154 KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 210

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 380 IAVKRVSQGS--KQG-IKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           +A+K + + +  K G ++   +EVKI  +L+H ++++L  +  +   + LV E   NG +
Sbjct: 39  VAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEM 98
Query: 437 DSHL------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           + +L      F EN     E R+ + Q + +G+LYL       ++HRD+  SN++L  N 
Sbjct: 99  NRYLKNRVKPFSEN-----EARHFMHQ-IITGMLYLHSHG---ILHRDLTLSNLLLTRNM 149
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
           N KI DFGLA  ++       T L GT  Y++PE AT      ESDV+S G +   +  G
Sbjct: 150 NIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIG 208
Query: 551 RKPIN 555
           R P +
Sbjct: 209 RPPFD 213

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 20/212 (9%)
Query: 350 ATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRV--SQGSKQGIK-EYASEVKIISRL 406
           A  DF   + L             +++   +A+K +  +Q  K G++ +   EV+I S L
Sbjct: 5   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLAS 461
           RH N+++L G+ H+   + L+ E+ P G++   L     F E    T+        +LA+
Sbjct: 65  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 118
Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
            L Y      + V+HRDIK  N++L S    KI DFG +    HA  S+ T L GT+ Y+
Sbjct: 119 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYL 172
Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKP 553
            PE        ++ D++S G++  E   G+ P
Sbjct: 173 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 204

>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked Carbohydrate In Complex With Lactose Length = 239

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 115/243 (47%), Gaps = 23/243 (9%)
Query: 35  LTFNYTSFSPQYDDNITYERA-YPDSNRVIQL--------PANRETAGRATYNQSMRLWD 85
           ++F+++ F P  +DN+T + A     + V+QL        PA  ++ GR  Y + + +WD
Sbjct: 4   ISFSFSEFEPG-NDNLTLQGASLITQSGVLQLTKINQNGMPA-WDSTGRTLYAKPVHIWD 61
Query: 86  KATGNLTDFTTHFSFVIDSRNS-SYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN 144
             TG +  F T FSF I+   +    ADGL FF+ P  SK    +G G  G+   ++  N
Sbjct: 62  MTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSK--PAQGYGYLGIFNQSKQDN 119
Query: 145 SSIPFVAVEFDVYVNSWD-PTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSST 203
            S   + VEFD + N WD P   H+GID+                 G+     I Y++S+
Sbjct: 120 -SYQTLGVEFDTFSNPWDPPQVPHIGIDV--NSIRSIKTQPFQLDNGQVANVVIKYDASS 176
Query: 204 HNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV--DFA-IFSIYSWEFN 260
             L        +  +    +   VD++Q LPE+V  G S ATG   D A    +YSW F 
Sbjct: 177 KLLHAVLVYPSSGAIYT--IAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQ 234
Query: 261 SSL 263
           +SL
Sbjct: 235 ASL 237

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 86.3 bits (212), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 110/212 (51%), Gaps = 19/212 (8%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    +V E+MP G+L  +
Sbjct: 60  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDY 118
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   +T      +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 119 LRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFG 175
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIACGRKPIN 555
           L+RL+    G   T  AG    + + APE       S +SDV++FG++  EIA       
Sbjct: 176 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIA-----TY 227
Query: 556 PKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC 587
             +P   + L Q V+DL   G  +E   P  C
Sbjct: 228 GMSPYPGIDLSQ-VYDLLEKGYRME--QPEGC 256

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 86.3 bits (212), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 88/174 (50%), Gaps = 18/174 (10%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G +   L    
Sbjct: 49  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS 108
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI DFG 
Sbjct: 109 KFDEQRTATY------ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW 159
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +    HA  S+ T L GT+ Y+ PE        ++ D++S G++  E   G+ P
Sbjct: 160 S---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 20/212 (9%)
Query: 350 ATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRV--SQGSKQGIK-EYASEVKIISRL 406
           A  DF   + L             +++   +A+K +  +Q  K G++ +   EV+I S L
Sbjct: 10  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLAS 461
           RH N+++L G+ H+   + L+ E+ P G++   L     F E    T+        +LA+
Sbjct: 70  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 123
Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
            L Y      + V+HRDIK  N++L S    KI DFG +    HA  S+ T L GT+ Y+
Sbjct: 124 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYL 177
Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKP 553
            PE        ++ D++S G++  E   G+ P
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 209

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 90/181 (49%), Gaps = 18/181 (9%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G++   L    
Sbjct: 41  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 100
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI DFG 
Sbjct: 101 KFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW 151
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAP 559
           +    HA  S+ T L GT+ Y+ PE        ++ D++S G++  E   G+ P      
Sbjct: 152 S---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 208
Query: 560 Q 560
           Q
Sbjct: 209 Q 209

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 20/195 (10%)
Query: 374 RETNSYIAVKRV--SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           R++   +A+K +  +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+
Sbjct: 34  RQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 93
Query: 431 MPNGSLDSHL-----FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
            P G++   L     F E    T+        +LA+ L Y      + V+HRDIK  N++
Sbjct: 94  APLGTVYRELQKLSRFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLL 144
Query: 486 LDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
           L SN   KI DFG +    HA  S+   L GT+ Y+ PE        ++ D++S G++  
Sbjct: 145 LGSNGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 201
Query: 546 EIACGRKPINPKAPQ 560
           E   G  P      Q
Sbjct: 202 EFLVGMPPFEAHTYQ 216

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G++   L    
Sbjct: 70  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 129
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI DFG 
Sbjct: 130 KFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW 180
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +    HA  S+ T L GT+ Y+ PE        ++ D++S G++  E   G+ P
Sbjct: 181 SV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 20/212 (9%)
Query: 350 ATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRV--SQGSKQGIK-EYASEVKIISRL 406
           A  DF   + L             +++   +A+K +  +Q  K G++ +   EV+I S L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLAS 461
           RH N+++L G+ H+   + L+ E+ P G++   L     F E    T+        +LA+
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
            L Y      + V+HRDIK  N++L S    KI DFG +    HA  S+ T L GT+ Y+
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYL 173
Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKP 553
            PE        ++ D++S G++  E   G+ P
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 20/212 (9%)
Query: 350 ATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRV--SQGSKQGIK-EYASEVKIISRL 406
           A  DF   + L             +++   +A+K +  +Q  K G++ +   EV+I S L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLAS 461
           RH N+++L G+ H+   + L+ E+ P G++   L     F E    T+        +LA+
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 122
Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
            L Y      + V+HRDIK  N++L S    KI DFG +    HA  S+ T L GT+ Y+
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYL 176
Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKP 553
            PE        ++ D++S G++  E   G+ P
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 20/212 (9%)
Query: 350 ATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRV--SQGSKQGIK-EYASEVKIISRL 406
           A  DF   + L             +++   +A+K +  +Q  K G++ +   EV+I S L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLAS 461
           RH N+++L G+ H+   + L+ E+ P G++   L     F E    T+        +LA+
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
            L Y      + V+HRDIK  N++L S    KI DFG +    HA  S+ T L GT+ Y+
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYL 173
Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKP 553
            PE        ++ D++S G++  E   G+ P
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 22/190 (11%)
Query: 374 RETNS-YIAVKRV---SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY 428
           RE NS +I   +V   +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ 
Sbjct: 28  REKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLIL 87
Query: 429 EFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSN 483
           E+ P G++   L     F E    T+        +LA+ L Y      + V+HRDIK  N
Sbjct: 88  EYAPLGTVYRELQKLSKFDEQRTATY------ITELANALSYCHS---KKVIHRDIKPEN 138
Query: 484 IMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIV 543
           ++L S    KI DFG +    HA  S+   L GT+ Y+ PE        ++ D++S G++
Sbjct: 139 LLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 544 ALEIACGRKP 553
             E   G+ P
Sbjct: 196 CYEFLVGKPP 205

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 102/193 (52%), Gaps = 12/193 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 39  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 97
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   ++      +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 98  LRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 154
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPI 554
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA  G  P 
Sbjct: 155 LSRLM---TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
Query: 555 NPKAPQGQVSLLQ 567
               P     LL+
Sbjct: 212 PGIDPSQVYELLE 224

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 18/174 (10%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G++   L    
Sbjct: 45  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 104
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI DFG 
Sbjct: 105 KFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW 155
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +    HA  S+ T L+GT+ Y+ PE        ++ D++S G++  E   G+ P
Sbjct: 156 SC---HAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G++   L    
Sbjct: 47  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 106
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI DFG 
Sbjct: 107 KFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW 157
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +    HA  S+ T L GT+ Y+ PE        ++ D++S G++  E   G+ P
Sbjct: 158 S---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G++   L    
Sbjct: 61  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 120
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI DFG 
Sbjct: 121 KFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW 171
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +    HA  S+ T L GT+ Y+ PE        ++ D++S G++  E   G+ P
Sbjct: 172 SV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G++   L    
Sbjct: 49  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 108
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI DFG 
Sbjct: 109 KFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW 159
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +    HA  S+ T L GT+ Y+ PE        ++ D++S G++  E   G+ P
Sbjct: 160 S---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G++   L    
Sbjct: 49  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 108
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI DFG 
Sbjct: 109 KFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW 159
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +    HA  S+ T L GT+ Y+ PE        ++ D++S G++  E   G+ P
Sbjct: 160 S---VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 377 NSYIAVKRV---SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           N  +A+K +    +  ++ +K +  EV   S+L H+N+V ++    E     LV E++  
Sbjct: 36  NIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG 95
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
            +L S   + +  L+ +        +  G+   +   +  +VHRDIK  NI++DSN   K
Sbjct: 96  PTL-SEYIESHGPLSVDTAINFTNQILDGI---KHAHDMRIVHRDIKPQNILIDSNKTLK 151
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKE-SDVYSFGIVALEIACGRK 552
           I DFG+A+ +     +QT  + GT+ Y +PE A  G+A+ E +D+YS GIV  E+  G  
Sbjct: 152 IFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA-KGEATDECTDIYSIGIVLYEMLVGEP 210
Query: 553 PIN 555
           P N
Sbjct: 211 PFN 213

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 102/193 (52%), Gaps = 12/193 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 39  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   ++      +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 98  LRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 154
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPI 554
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA  G  P 
Sbjct: 155 LSRLM---TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
Query: 555 NPKAPQGQVSLLQ 567
               P     LL+
Sbjct: 212 PGIDPSQVYELLE 224

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 20/212 (9%)
Query: 350 ATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRV--SQGSKQGIK-EYASEVKIISRL 406
           A  DF   + L             +++   +A+K +  +Q  K G++ +   EV+I S L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLAS 461
           RH N+++L G+ H+   + L+ E+ P G++   L     F E    T+        +LA+
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
            L Y      + V+HRDIK  N++L S    KI DFG +    HA  S+ T L GT+ Y+
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLDYL 173
Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKP 553
            PE        ++ D++S G++  E   G+ P
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 380 IAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK  +V   + +  + + +EV ++ + RH N++  +G+   K  L +V ++    SL 
Sbjct: 61  VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM-TKDNLAIVTQWCEGSSLY 119
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
            HL  + +         IA+  A G+ YL     + ++HRD+KS+NI L      KIGDF
Sbjct: 120 KHLHVQETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDF 176
Query: 498 GLARLVEHAKGSQTTVL-AGTMGYMAPEC---ATTGKASKESDVYSFGIVALEIACGRKP 553
           GLA +     GSQ      G++ +MAPE          S +SDVYS+GIV  E+  G  P
Sbjct: 177 GLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 46  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   +       +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 161
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 162 LSRLM---TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 46  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 104
Query: 440 LFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   +       +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 161
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 162 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 96/173 (55%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 46  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 440 LFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   ++      +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 105 LRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 161
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 162 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 96/173 (55%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 41  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   ++      +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 156
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 157 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 42  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 100
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   +       +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 101 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 157
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 158 LSRLM---TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 207

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 96/173 (55%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 41  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   ++      +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 156
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 157 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 102/193 (52%), Gaps = 12/193 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 39  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   ++      +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 98  LRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 154
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPI 554
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA  G  P 
Sbjct: 155 LSRLM---TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
Query: 555 NPKAPQGQVSLLQ 567
               P     LL+
Sbjct: 212 PGIDPSQVYELLE 224

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 46  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   +       +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 161
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 162 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211

>pdb|1GSL|A Chain A, Lectin (Fourth Isolated From (Griffonia Simplicifolia)) Complex With Y Human Blood Group Determinant Length = 243

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 69  RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTN 128
           R +AG+A+Y++ + LWD +TG    F T F+F++ +  +   ADGLAFFLAP  S +   
Sbjct: 48  RSSAGQASYSEPVFLWD-STGKAASFYTSFTFLLKNYGAPT-ADGLAFFLAPVDSSV--K 103
Query: 129 KGGGSFGLTKDNEPLNSSI-PFVAVEFDVYVNS-W-DPTFSHVGIDIXXXXXXXXXXXXX 185
             GG  GL +     + S    VAVEFD ++N  W DP + H+GID+             
Sbjct: 104 DYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTRWEN 163
Query: 186 XXXXGRR-NEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDY----QVDLRQHLPEFVTFG 240
               G     A I+Y++ +  L+V        L    G DY     VDL + LP+ V  G
Sbjct: 164 DDAYGSSIATAHITYDARSKILTVL-------LSYEHGRDYILSHVVDLAKVLPQKVRIG 216
Query: 241 FSMATGVDFAIFSIYSWEFNSSLE 264
           FS   G D   + I SW F S+L+
Sbjct: 217 FSAGVGYDEVTY-ILSWHFFSTLD 239

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G++   L    
Sbjct: 44  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 103
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI DFG 
Sbjct: 104 KFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW 154
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +    HA  S+ T L GT+ Y+ PE        ++ D++S G++  E   G+ P
Sbjct: 155 S---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G++   L    
Sbjct: 45  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 104
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI DFG 
Sbjct: 105 KFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW 155
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +    HA  S+ T L GT+ Y+ PE        ++ D++S G++  E   G+ P
Sbjct: 156 S---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 45  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 103
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   +       +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 104 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 160
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 161 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 210

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 96/173 (55%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 41  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 440 LFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   ++      +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 156
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 157 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 96/173 (55%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 41  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   ++      +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 156
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 157 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 350 ATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRV--SQGSKQGIK-EYASEVKIISRL 406
           A  DF   + L             +++   +A+K +  +Q  K G++ +   EV+I S L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLAS 461
           RH N+++L G+ H+   + L+ E+ P G++   L     F E    T+        +LA+
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
            L Y      + V+HRDIK  N++L S    KI DFG +    HA  S+   L GT+ Y+
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYL 173
Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKP 553
            PE        ++ D++S G++  E   G+ P
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G++   L    
Sbjct: 44  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 103
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI DFG 
Sbjct: 104 KFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW 154
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +    HA  S+ T L GT+ Y+ PE        ++ D++S G++  E   G+ P
Sbjct: 155 S---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 41  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 440 LFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   +       +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 100 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 156
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 157 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 20/212 (9%)
Query: 350 ATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRV--SQGSKQGIK-EYASEVKIISRL 406
           A  DF   + L             +++   +A+K +  +Q  K G++ +   EV+I S L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLAS 461
           RH N+++L G+ H+   + L+ E+ P G++   L     F E    T+        +LA+
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 122
Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
            L Y      + V+HRDIK  N++L S    KI +FG +    HA  S+ T L GT+ Y+
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYL 176
Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKP 553
            PE        ++ D++S G++  E   G+ P
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 41  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   +       +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 100 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 156
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 157 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 46  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   +       +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 161
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 162 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Query: 349 LATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLR 407
           L  +DF    +L             R +   +A K +    K  I+ +   E++++    
Sbjct: 13  LKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN 72
Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
              +V   G  +   E+ +  E M  GSLD  + KE   +  E   K++  +  GL YL+
Sbjct: 73  SPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKEAKRIPEEILGKVSIAVLRGLAYLR 131
Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPECA 526
           E+ +  ++HRD+K SNI+++S    K+ DFG++ +L++    S      GT  YMAPE  
Sbjct: 132 EKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMAPERL 185
Query: 527 TTGKASKESDVYSFGIVALEIACGRKPINP 556
                S +SD++S G+  +E+A GR PI P
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGRYPIPP 215

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G++   L    
Sbjct: 49  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 108
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI DFG 
Sbjct: 109 KFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW 159
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +    HA  S+ T L GT+ Y+ PE        ++ D++S G++  E   G+ P
Sbjct: 160 S---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 43  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   +       +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 102 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 158
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 159 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 208

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 350 ATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRV--SQGSKQGIK-EYASEVKIISRL 406
           A  DF   + L             +++   +A+K +  +Q  K G++ +   EV+I S L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLAS 461
           RH N+++L G+ H+   + L+ E+ P G++   L     F E    T+        +LA+
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
            L Y      + V+HRDIK  N++L S    KI DFG +    HA  S+   L GT+ Y+
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYL 173
Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKP 553
            PE        ++ D++S G++  E   G+ P
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 42  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 100
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   +       +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 101 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 157
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 158 LSRLM---TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 207

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 54  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 112
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   +       +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 113 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 169
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 170 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 219

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 43  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   +       +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 102 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 158
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 159 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 208

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 43  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 440 LFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   +       +A  ++S + YL+   ++  +HRD+ + N ++  N   K+ DFG
Sbjct: 102 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 158
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 159 LSRLM---TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 208

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G +   L    
Sbjct: 49  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS 108
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI DFG 
Sbjct: 109 KFDEQRTATY------ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW 159
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +    HA  S+   L GT+ Y+ PE        ++ D++S G++  E   G+ P
Sbjct: 160 S---VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 350 ATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRV--SQGSKQGIK-EYASEVKIISRL 406
           A  DF   + L             +++   +A+K +  +Q  K G++ +   EV+I S L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLAS 461
           RH N+++L G+ H+   + L+ E+ P G++   L     F E    T+        +LA+
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 122
Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
            L Y      + V+HRDIK  N++L S    KI DFG +    HA  S+   L GT+ Y+
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYL 176
Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKP 553
            PE        ++ D++S G++  E   G+ P
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G++   L    
Sbjct: 46  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 105
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI +FG 
Sbjct: 106 KFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGW 156
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +    HA  S+ T L GT+ Y+ PE        ++ D++S G++  E   G+ P
Sbjct: 157 S---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 11/185 (5%)
Query: 375 ETNSYIAVKRV---SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           + N +I   +V   SQ  K+G++ +   E++I S LRH N++++  + H++K + L+ EF
Sbjct: 37  KQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEF 96
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
            P G L   L +++     +      ++LA  L Y     E+ V+HRDIK  N+++    
Sbjct: 97  APRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKG 152
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             KI DFG +    HA   +   + GT+ Y+ PE        ++ D++  G++  E   G
Sbjct: 153 ELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
Query: 551 RKPIN 555
             P +
Sbjct: 210 MPPFD 214

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 11/185 (5%)
Query: 375 ETNSYIAVKRV---SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           + N +I   +V   SQ  K+G++ +   E++I S LRH N++++  + H++K + L+ EF
Sbjct: 36  KQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEF 95
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
            P G L   L +++     +      ++LA  L Y     E+ V+HRDIK  N+++    
Sbjct: 96  APRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKG 151
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             KI DFG +    HA   +   + GT+ Y+ PE        ++ D++  G++  E   G
Sbjct: 152 ELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
Query: 551 RKPIN 555
             P +
Sbjct: 209 MPPFD 213

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 350 ATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRV--SQGSKQGIK-EYASEVKIISRL 406
           A  DF   + L             +++   +A+K +  +Q  K G++ +   EV+I S L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLAS 461
           RH N+++L G+ H+   + L+ E+ P G++   L     F E    T+        +LA+
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 122
Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
            L Y      + V+HRDIK  N++L S    KI DFG +    HA  S+   L GT+ Y+
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYL 176
Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKP 553
            PE        ++ D++S G++  E   G+ P
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 18/174 (10%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G++   L    
Sbjct: 45  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 104
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI DFG 
Sbjct: 105 KFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW 155
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +    HA  S+   L GT+ Y+ PE        ++ D++S G++  E   G+ P
Sbjct: 156 S---VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 96/173 (55%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 248 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 306
Query: 440 LFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   ++      +A  ++S + YL+   ++  +HR++ + N ++  N   K+ DFG
Sbjct: 307 LRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFG 363
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 364 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 413

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 18/174 (10%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G++   L    
Sbjct: 46  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 105
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI DFG 
Sbjct: 106 KFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW 156
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +    HA  S+   L GT+ Y+ PE        ++ D++S G++  E   G+ P
Sbjct: 157 S---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 41/212 (19%)
Query: 381 AVKRVSQ-GSKQGIKEYASEVKIISRLRHR-NLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           A+KR+ +  SK   +++A E++++ +L H  N++ LLG C  +  L L  E+ P+G+L  
Sbjct: 46  AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 105
Query: 439 HLFKENSL---------------LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSN 483
            L K   L               L+ +     A D+A G+ YL ++     +HRD+ + N
Sbjct: 106 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARN 162
Query: 484 IMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECATTGKASKESDVY 538
           I++  N+ AKI DFGL+R        Q   +  TMG     +MA E       +  SDV+
Sbjct: 163 ILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVW 215
Query: 539 SFGIVALEIA-------CGR--KPINPKAPQG 561
           S+G++  EI        CG     +  K PQG
Sbjct: 216 SYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 247

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 350 ATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRV--SQGSKQGIK-EYASEVKIISRL 406
           A  DF   + L             +++   +A+K +  +Q  K G++ +   EV+I S L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLAS 461
           RH N+++L G+ H+   + L+ E+ P G++   L     F E    T+        +LA+
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 122
Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
            L Y      + V+HRDIK  N++L S    KI DFG +    HA  S+   L GT+ Y+
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYL 176
Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKP 553
            PE        ++ D++S G++  E   G+ P
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 41/212 (19%)
Query: 381 AVKRVSQ-GSKQGIKEYASEVKIISRLRHR-NLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           A+KR+ +  SK   +++A E++++ +L H  N++ LLG C  +  L L  E+ P+G+L  
Sbjct: 56  AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 115
Query: 439 HLFKENSL---------------LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSN 483
            L K   L               L+ +     A D+A G+ YL ++     +HRD+ + N
Sbjct: 116 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARN 172
Query: 484 IMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECATTGKASKESDVY 538
           I++  N+ AKI DFGL+R        Q   +  TMG     +MA E       +  SDV+
Sbjct: 173 ILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVW 225
Query: 539 SFGIVALEIA-------CGR--KPINPKAPQG 561
           S+G++  EI        CG     +  K PQG
Sbjct: 226 SYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 257

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 100/192 (52%), Gaps = 23/192 (11%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + S+   +++  E ++++ L+H+++V+  G C E + LL+V+E+M +G L+  
Sbjct: 74  VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 133
Query: 440 LFKEN--------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
           L                    L       +A  +A+G++YL        VHRD+ + N +
Sbjct: 134 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCL 190
Query: 486 LDSNFNAKIGDFGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGI 542
           +      KIGDFG++R +   ++ +    T+L   + +M PE     K + ESDV+SFG+
Sbjct: 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML--PIRWMPPESILYRKFTTESDVWSFGV 248
Query: 543 VALEI-ACGRKP 553
           V  EI   G++P
Sbjct: 249 VLWEIFTYGKQP 260

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + + + ++E+  E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +
Sbjct: 287 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 345
Query: 440 LFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L + N   +       +A  ++S + YL+   ++  +HR++ + N ++  N   K+ DFG
Sbjct: 346 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFG 402
Query: 499 LARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASKESDVYSFGIVALEIA 548
           L+RL+    G   T  AG    + + APE     K S +SDV++FG++  EIA
Sbjct: 403 LSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 452

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 100/183 (54%), Gaps = 19/183 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +A+K +++  G K  + E+  E  I++ + H +LV+LLG C     + LV + MP+G L 
Sbjct: 47  VAIKILNETTGPKANV-EFMDEALIMASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLL 104
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
            ++ +    +  +        +A G++YL+E   + +VHRD+ + N+++ S  + KI DF
Sbjct: 105 EYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDF 161
Query: 498 GLARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-G 550
           GLARL+E      +A G +  +      +MA EC    K + +SDV+S+G+   E+   G
Sbjct: 162 GLARLLEGDEKEYNADGGKMPI-----KWMALECIHYRKFTHQSDVWSYGVTIWELMTFG 216
Query: 551 RKP 553
            KP
Sbjct: 217 GKP 219

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 18/174 (10%)
Query: 386 SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---- 440
           +Q  K G++ +   EV+I S LRH N+++L G+ H+   + L+ E+ P G++   L    
Sbjct: 70  AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 129
Query: 441 -FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
            F E    T+        +LA+ L Y      + V+HRDIK  N++L S    KI DFG 
Sbjct: 130 KFDEQRTATY------ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW 180
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +    HA  S+   L GT+ Y+ PE        ++ D++S G++  E   G+ P
Sbjct: 181 SV---HAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 100/192 (52%), Gaps = 23/192 (11%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + S+   +++  E ++++ L+H+++V+  G C E + LL+V+E+M +G L+  
Sbjct: 45  VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 104
Query: 440 LFKEN--------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
           L                    L       +A  +A+G++YL        VHRD+ + N +
Sbjct: 105 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCL 161
Query: 486 LDSNFNAKIGDFGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGI 542
           +      KIGDFG++R +   ++ +    T+L   + +M PE     K + ESDV+SFG+
Sbjct: 162 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML--PIRWMPPESILYRKFTTESDVWSFGV 219
Query: 543 VALEI-ACGRKP 553
           V  EI   G++P
Sbjct: 220 VLWEIFTYGKQP 231

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 23/247 (9%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 78  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 137
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ YL     +  VHRD+ + N MLD  F  K+ D
Sbjct: 138 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVAD 194
Query: 497 FGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLAR +   E+      T     + +MA E   T K + +SDV+SFG++  E+     P
Sbjct: 195 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
Query: 554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR 613
             P      ++    V+ L G  +LL+   P  C D        L  V L C HP   +R
Sbjct: 255 PYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHPKAEMR 299
Query: 614 PSIRQVI 620
           PS  +++
Sbjct: 300 PSFSELV 306

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 100/192 (52%), Gaps = 23/192 (11%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + + S+   +++  E ++++ L+H+++V+  G C E + LL+V+E+M +G L+  
Sbjct: 51  VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 110
Query: 440 LFKEN--------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
           L                    L       +A  +A+G++YL        VHRD+ + N +
Sbjct: 111 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCL 167
Query: 486 LDSNFNAKIGDFGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGI 542
           +      KIGDFG++R +   ++ +    T+L   + +M PE     K + ESDV+SFG+
Sbjct: 168 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML--PIRWMPPESILYRKFTTESDVWSFGV 225
Query: 543 VALEI-ACGRKP 553
           V  EI   G++P
Sbjct: 226 VLWEIFTYGKQP 237

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 23/247 (9%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 79  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 138
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ YL     +  VHRD+ + N MLD  F  K+ D
Sbjct: 139 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVAD 195
Query: 497 FGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLAR +   E+      T     + +MA E   T K + +SDV+SFG++  E+     P
Sbjct: 196 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
Query: 554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR 613
             P      ++    V+ L G  +LL+   P  C D        L  V L C HP   +R
Sbjct: 256 PYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHPKAEMR 300
Query: 614 PSIRQVI 620
           PS  +++
Sbjct: 301 PSFSELV 307

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 23/247 (9%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 55  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 114
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ YL     +  VHRD+ + N MLD  F  K+ D
Sbjct: 115 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVAD 171
Query: 497 FGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLAR +   E+      T     + +MA E   T K + +SDV+SFG++  E+     P
Sbjct: 172 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
Query: 554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR 613
             P      ++    V+ L G  +LL+   P  C D        L  V L C HP   +R
Sbjct: 232 PYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHPKAEMR 276
Query: 614 PSIRQVI 620
           PS  +++
Sbjct: 277 PSFSELV 283

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 23/247 (9%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 60  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ YL     +  VHRD+ + N MLD  F  K+ D
Sbjct: 120 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 497 FGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLAR +   E+      T     + +MA E   T K + +SDV+SFG++  E+     P
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Query: 554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR 613
             P      ++    V+ L G  +LL+   P  C D        L  V L C HP   +R
Sbjct: 237 PYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHPKAEMR 281
Query: 614 PSIRQVI 620
           PS  +++
Sbjct: 282 PSFSELV 288

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 23/247 (9%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 52  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 111
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ YL     +  VHRD+ + N MLD  F  K+ D
Sbjct: 112 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVAD 168
Query: 497 FGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLAR +   E+      T     + +MA E   T K + +SDV+SFG++  E+     P
Sbjct: 169 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
Query: 554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR 613
             P      ++    V+ L G  +LL+   P  C D        L  V L C HP   +R
Sbjct: 229 PYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHPKAEMR 273
Query: 614 PSIRQVI 620
           PS  +++
Sbjct: 274 PSFSELV 280

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 23/247 (9%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 60  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ YL     +  VHRD+ + N MLD  F  K+ D
Sbjct: 120 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 497 FGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLAR +   E+      T     + +MA E   T K + +SDV+SFG++  E+     P
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Query: 554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR 613
             P      ++    V+ L G  +LL+   P  C D        L  V L C HP   +R
Sbjct: 237 PYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHPKAEMR 281
Query: 614 PSIRQVI 620
           PS  +++
Sbjct: 282 PSFSELV 288

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 100/183 (54%), Gaps = 19/183 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +A+K +++  G K  + E+  E  I++ + H +LV+LLG C     + LV + MP+G L 
Sbjct: 70  VAIKILNETTGPKANV-EFMDEALIMASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLL 127
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
            ++ +    +  +        +A G++YL+E   + +VHRD+ + N+++ S  + KI DF
Sbjct: 128 EYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDF 184
Query: 498 GLARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-G 550
           GLARL+E      +A G +  +      +MA EC    K + +SDV+S+G+   E+   G
Sbjct: 185 GLARLLEGDEKEYNADGGKMPI-----KWMALECIHYRKFTHQSDVWSYGVTIWELMTFG 239
Query: 551 RKP 553
            KP
Sbjct: 240 GKP 242

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 23/247 (9%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 58  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 117
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ YL     +  VHRD+ + N MLD  F  K+ D
Sbjct: 118 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVAD 174
Query: 497 FGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLAR +   E+      T     + +MA E   T K + +SDV+SFG++  E+     P
Sbjct: 175 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
Query: 554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR 613
             P      ++    V+ L G  +LL+   P  C D        L  V L C HP   +R
Sbjct: 235 PYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHPKAEMR 279
Query: 614 PSIRQVI 620
           PS  +++
Sbjct: 280 PSFSELV 286

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 23/247 (9%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 59  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 118
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ YL     +  VHRD+ + N MLD  F  K+ D
Sbjct: 119 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVAD 175
Query: 497 FGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLAR +   E+      T     + +MA E   T K + +SDV+SFG++  E+     P
Sbjct: 176 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
Query: 554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR 613
             P      ++    V+ L G  +LL+   P  C D        L  V L C HP   +R
Sbjct: 236 PYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHPKAEMR 280
Query: 614 PSIRQVI 620
           PS  +++
Sbjct: 281 PSFSELV 287

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 23/247 (9%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 57  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 116
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ YL     +  VHRD+ + N MLD  F  K+ D
Sbjct: 117 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVAD 173
Query: 497 FGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLAR +   E+      T     + +MA E   T K + +SDV+SFG++  E+     P
Sbjct: 174 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
Query: 554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR 613
             P      ++    V+ L G  +LL+   P  C D        L  V L C HP   +R
Sbjct: 234 PYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHPKAEMR 278
Query: 614 PSIRQVI 620
           PS  +++
Sbjct: 279 PSFSELV 285

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K + +GS     E+  E K++  L H  LVQL G C +++ + ++ E+M NG L ++
Sbjct: 51  VAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
           L +       +   ++ +D+   + YL+    +  +HRD+ + N +++     K+ DFGL
Sbjct: 110 LREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGL 166
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKP 553
           +R V   + + +      + +  PE     K S +SD+++FG++  EI + G+ P
Sbjct: 167 SRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 9/183 (4%)
Query: 376 TNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +AVK +  +Q +   +++   EV+I+  L H N+V+L      +K L LV E+   
Sbjct: 38  TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G +  +L     +   E R K  Q + S + Y  +++   +VHRD+K+ N++LD++ N K
Sbjct: 98  GEVFDYLVAHGRMKEKEARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIK 153
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRK 552
           I DFG +   E   G++     G+  Y APE     K    E DV+S G++   +  G  
Sbjct: 154 IADFGFSN--EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 553 PIN 555
           P +
Sbjct: 212 PFD 214

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 9/183 (4%)
Query: 376 TNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +AVK +  +Q +   +++   EV+I+  L H N+V+L      +K L LV E+   
Sbjct: 38  TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G +  +L     +   E R K  Q + S + Y  +++   +VHRD+K+ N++LD++ N K
Sbjct: 98  GEVFDYLVAHGRMKEKEARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIK 153
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRK 552
           I DFG +   E   G++     G+  Y APE     K    E DV+S G++   +  G  
Sbjct: 154 IADFGFSN--EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 553 PIN 555
           P +
Sbjct: 212 PFD 214

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 9/183 (4%)
Query: 376 TNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +AVK +  +Q +   +++   EV+I+  L H N+V+L      +K L LV E+   
Sbjct: 39  TGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASG 98
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G +  +L     +   E R K  Q + S + Y  +++   +VHRD+K+ N++LD + N K
Sbjct: 99  GEVFDYLVAHGRMKEKEARAKFRQ-IVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIK 154
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGRK 552
           I DFG +   E   G++     G+  Y APE     K    E DV+S G++   +  G  
Sbjct: 155 IADFGFSN--EFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 212
Query: 553 PIN 555
           P +
Sbjct: 213 PFD 215

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K + +GS     E+  E K++  L H  LVQL G C +++ + ++ E+M NG L ++
Sbjct: 31  VAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 89
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
           L +       +   ++ +D+   + YL+    +  +HRD+ + N +++     K+ DFGL
Sbjct: 90  LREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGL 146
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKP 553
           +R V   + + +      + +  PE     K S +SD+++FG++  EI + G+ P
Sbjct: 147 SRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 201

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 115/247 (46%), Gaps = 23/247 (9%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 59  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 118
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ YL     +  VHRD+ + N MLD  F  K+ D
Sbjct: 119 RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVAD 175
Query: 497 FGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLAR +   E       T     + +MA E   T K + +SDV+SFG++  E+     P
Sbjct: 176 FGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
Query: 554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR 613
             P      ++    V+ L G  +LL+   P  C D        L  V L C HP   +R
Sbjct: 236 PYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHPKAEMR 280
Query: 614 PSIRQVI 620
           PS  +++
Sbjct: 281 PSFSELV 287

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K + +GS     E+  E K++  L H  LVQL G C +++ + ++ E+M NG L ++
Sbjct: 36  VAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
           L +       +   ++ +D+   + YL+    +  +HRD+ + N +++     K+ DFGL
Sbjct: 95  LREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGL 151
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKP 553
           +R V   + + +      + +  PE     K S +SD+++FG++  EI + G+ P
Sbjct: 152 SRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K + +GS     E+  E K++  L H  LVQL G C +++ + ++ E+M NG L ++
Sbjct: 51  VAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
           L +       +   ++ +D+   + YL+    +  +HRD+ + N +++     K+ DFGL
Sbjct: 110 LREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGL 166
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKP 553
           +R V   + + +      + +  PE     K S +SD+++FG++  EI + G+ P
Sbjct: 167 SRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K + +GS     E+  E K++  L H  LVQL G C +++ + ++ E+M NG L ++
Sbjct: 35  VAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 93
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
           L +       +   ++ +D+   + YL+    +  +HRD+ + N +++     K+ DFGL
Sbjct: 94  LREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGL 150
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKP 553
           +R V   + + +      + +  PE     K S +SD+++FG++  EI + G+ P
Sbjct: 151 SRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 205

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 9/183 (4%)
Query: 376 TNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +AVK +  +Q +   +++   EV+I+  L H N+V+L      +K L LV E+   
Sbjct: 38  TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G +  +L     +   E R K  Q + S + Y  +++   +VHRD+K+ N++LD++ N K
Sbjct: 98  GEVFDYLVAHGRMKEKEARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIK 153
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRK 552
           I DFG +   E   G++     G   Y APE     K    E DV+S G++   +  G  
Sbjct: 154 IADFGFSN--EFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 553 PIN 555
           P +
Sbjct: 212 PFD 214

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K + +GS     E+  E K++  L H  LVQL G C +++ + ++ E+M NG L ++
Sbjct: 42  VAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 100
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
           L +       +   ++ +D+   + YL+    +  +HRD+ + N +++     K+ DFGL
Sbjct: 101 LREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGL 157
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKP 553
           +R V   + + +      + +  PE     K S +SD+++FG++  EI + G+ P
Sbjct: 158 SRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 212

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 13/187 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLG-WCHEKKELLLVYEFMPNGSLDS 438
           +AVK +   +    + + +E  ++++LRH NLVQLLG    EK  L +V E+M  GSL  
Sbjct: 219 VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 276
Query: 439 HL-FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
           +L  +  S+L  +   K + D+   + YL+       VHRD+ + N+++  +  AK+ DF
Sbjct: 277 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDF 333
Query: 498 GLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINP 556
           GL +  E +    T  L   + + APE     K S +SDV+SFGI+  EI + GR P  P
Sbjct: 334 GLTK--EASSTQDTGKLP--VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY-P 388
Query: 557 KAPQGQV 563
           + P   V
Sbjct: 389 RIPLKDV 395

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK +  GS   ++ + +E  ++  L+H  LV+L      K+ + ++ EFM  GSL
Sbjct: 39  HTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSL 96
Query: 437 DSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   E S          +  +A G+ ++++   +  +HRD++++NI++ ++   KI 
Sbjct: 97  LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIA 153
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           DFGLAR++E  + +        + + APE    G  + +SDV+SFGI+ +EI   GR P
Sbjct: 154 DFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K + +GS     E+  E K++  L H  LVQL G C +++ + ++ E+M NG L ++
Sbjct: 36  VAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
           L +       +   ++ +D+   + YL+    +  +HRD+ + N +++     K+ DFGL
Sbjct: 95  LREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGL 151
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKP 553
           +R V   + + +      + +  PE     K S +SD+++FG++  EI + G+ P
Sbjct: 152 SRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 9/183 (4%)
Query: 376 TNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +AV+ +  +Q +   +++   EV+I+  L H N+V+L      +K L LV E+   
Sbjct: 38  TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G +  +L     +   E R K  Q + S + Y  +++   +VHRD+K+ N++LD++ N K
Sbjct: 98  GEVFDYLVAHGRMKEKEARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIK 153
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRK 552
           I DFG +   E   G++     G+  Y APE     K    E DV+S G++   +  G  
Sbjct: 154 IADFGFSN--EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 553 PIN 555
           P +
Sbjct: 212 PFD 214

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 41/212 (19%)
Query: 381 AVKRVSQ-GSKQGIKEYASEVKIISRLRHR-NLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           A+KR+ +  SK   +++A E++++ +L H  N++ LLG C  +  L L  E+ P+G+L  
Sbjct: 53  AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 112
Query: 439 HLFKENSL---------------LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSN 483
            L K   L               L+ +     A D+A G+ YL ++     +HR++ + N
Sbjct: 113 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRNLAARN 169
Query: 484 IMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECATTGKASKESDVY 538
           I++  N+ AKI DFGL+R        Q   +  TMG     +MA E       +  SDV+
Sbjct: 170 ILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVW 222
Query: 539 SFGIVALEIA-------CGR--KPINPKAPQG 561
           S+G++  EI        CG     +  K PQG
Sbjct: 223 SYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 254

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 100/185 (54%), Gaps = 17/185 (9%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLG-WCHEKKELLLVYEFMPNGSLDS 438
           +AVK +   +    + + +E  ++++LRH NLVQLLG    EK  L +V E+M  GSL  
Sbjct: 47  VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 104
Query: 439 HL-FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
           +L  +  S+L  +   K + D+   + YL+       VHRD+ + N+++  +  AK+ DF
Sbjct: 105 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDF 161
Query: 498 GLARLVEHAKGSQTTVLAGTM--GYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPI 554
           GL +    A  +Q T   G +   + APE     K S +SDV+SFGI+  EI + GR P 
Sbjct: 162 GLTK---EASSTQDT---GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
Query: 555 NPKAP 559
            P+ P
Sbjct: 216 -PRIP 219

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 101/189 (53%), Gaps = 17/189 (8%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLG-WCHEKKELLLVYEFMPNGSLDS 438
           +AVK +   +    + + +E  ++++LRH NLVQLLG    EK  L +V E+M  GSL  
Sbjct: 32  VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 89
Query: 439 HL-FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
           +L  +  S+L  +   K + D+   + YL+       VHRD+ + N+++  +  AK+ DF
Sbjct: 90  YLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDF 146
Query: 498 GLARLVEHAKGSQTTVLAGTM--GYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPI 554
           GL +    A  +Q T   G +   + APE     K S +SDV+SFGI+  EI + GR P 
Sbjct: 147 GLTK---EASSTQDT---GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
Query: 555 NPKAPQGQV 563
            P+ P   V
Sbjct: 201 -PRIPLKDV 208

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 9/183 (4%)
Query: 376 TNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +AVK +  +Q +   +++   EV+I+  L H N+V+L      +K L LV E+   
Sbjct: 31  TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 90
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G +  +L     +   E R K  Q + S + Y  +++   +VHRD+K+ N++LD++ N K
Sbjct: 91  GEVFDYLVAHGWMKEKEARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIK 146
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRK 552
           I DFG +   E   G++     G+  Y APE     K    E DV+S G++   +  G  
Sbjct: 147 IADFGFSN--EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 204
Query: 553 PIN 555
           P +
Sbjct: 205 PFD 207

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 33/252 (13%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 119 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 178
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ +L  +     VHRD+ + N MLD  F  K+ D
Sbjct: 179 RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVAD 235
Query: 497 FGLAR--------LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
           FGLAR         V +  G++  V      +MA E   T K + +SDV+SFG++  E+ 
Sbjct: 236 FGLARDMYDKEFDSVHNKTGAKLPV-----KWMALESLQTQKFTTKSDVWSFGVLLWELM 290
Query: 549 CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHP 608
               P  P      ++    V+ L G  +LL+   P  C D        L  V L C HP
Sbjct: 291 TRGAPPYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHP 335
Query: 609 DENLRPSIRQVI 620
              +RPS  +++
Sbjct: 336 KAEMRPSFSELV 347

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 33/252 (13%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 58  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 117
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ +L     +  VHRD+ + N MLD  F  K+ D
Sbjct: 118 RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVAD 174
Query: 497 FGLAR--------LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
           FGLAR         V +  G++  V      +MA E   T K + +SDV+SFG++  E+ 
Sbjct: 175 FGLARDMYDKEFDSVHNKTGAKLPV-----KWMALESLQTQKFTTKSDVWSFGVLLWELM 229
Query: 549 CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHP 608
               P  P      ++    V+ L G  +LL+   P  C D        L  V L C HP
Sbjct: 230 TRGAPPYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHP 274
Query: 609 DENLRPSIRQVI 620
              +RPS  +++
Sbjct: 275 KAEMRPSFSELV 286

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK +  GS   ++ + +E  ++  L+H  LV+L      K+ + ++ EFM  GSL
Sbjct: 212 HTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSL 269
Query: 437 DSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   E S          +  +A G+ ++++   +  +HRD++++NI++ ++   KI 
Sbjct: 270 LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIA 326
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           DFGLAR++E  + +        + + APE    G  + +SDV+SFGI+ +EI   GR P
Sbjct: 327 DFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 33/252 (13%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 60  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ +L     +  VHRD+ + N MLD  F  K+ D
Sbjct: 120 RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 497 FGLAR--------LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
           FGLAR         V +  G++  V      +MA E   T K + +SDV+SFG++  E+ 
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPV-----KWMALESLQTQKFTTKSDVWSFGVLLWELM 231
Query: 549 CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHP 608
               P  P      ++    V+ L G  +LL+   P  C D        L  V L C HP
Sbjct: 232 TRGAPPYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHP 276
Query: 609 DENLRPSIRQVI 620
              +RPS  +++
Sbjct: 277 KAEMRPSFSELV 288

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 33/252 (13%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 60  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ +L     +  VHRD+ + N MLD  F  K+ D
Sbjct: 120 RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 497 FGLAR--------LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
           FGLAR         V +  G++  V      +MA E   T K + +SDV+SFG++  E+ 
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPV-----KWMALESLQTQKFTTKSDVWSFGVLLWELM 231
Query: 549 CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHP 608
               P  P      ++    V+ L G  +LL+   P  C D        L  V L C HP
Sbjct: 232 TRGAPPYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHP 276
Query: 609 DENLRPSIRQVI 620
              +RPS  +++
Sbjct: 277 KAEMRPSFSELV 288

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 33/252 (13%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 65  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 124
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ +L     +  VHRD+ + N MLD  F  K+ D
Sbjct: 125 RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVAD 181
Query: 497 FGLAR--------LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
           FGLAR         V +  G++  V      +MA E   T K + +SDV+SFG++  E+ 
Sbjct: 182 FGLARDMYDKEFDSVHNKTGAKLPV-----KWMALESLQTQKFTTKSDVWSFGVLLWELM 236
Query: 549 CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHP 608
               P  P      ++    V+ L G  +LL+   P  C D        L  V L C HP
Sbjct: 237 TRGAPPYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHP 281
Query: 609 DENLRPSIRQVI 620
              +RPS  +++
Sbjct: 282 KAEMRPSFSELV 293

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 10/177 (5%)
Query: 376 TNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEK--KELLLVYEFMP 432
           T   +AVK + +G    ++  +  E++I+  L H ++V+  G C ++  K + LV E++P
Sbjct: 37  TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 96
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            GSL  +L +    L     +  AQ +  G+ YL     Q  +HR + + N++LD++   
Sbjct: 97  LGSLRDYLPRHCVGLAQLLLF--AQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLV 151
Query: 493 KIGDFGLARLVEHAKGSQTTVLAG--TMGYMAPECATTGKASKESDVYSFGIVALEI 547
           KIGDFGLA+ V            G   + + APEC    K    SDV+SFG+   E+
Sbjct: 152 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYEL 208

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 33/252 (13%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 61  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 120
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ +L     +  VHRD+ + N MLD  F  K+ D
Sbjct: 121 RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 497 FGLAR--------LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
           FGLAR         V +  G++  V      +MA E   T K + +SDV+SFG++  E+ 
Sbjct: 178 FGLARDMYDKEFDSVHNKTGAKLPV-----KWMALESLQTQKFTTKSDVWSFGVLLWELM 232
Query: 549 CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHP 608
               P  P      ++    V+ L G  +LL+   P  C D        L  V L C HP
Sbjct: 233 TRGAPPYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHP 277
Query: 609 DENLRPSIRQVI 620
              +RPS  +++
Sbjct: 278 KAEMRPSFSELV 289

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 33/252 (13%)
Query: 379 YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
           + AVK +++ +  G + ++ +E  I+    H N++ LLG C   +   L+V  +M +G L
Sbjct: 61  HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL 120
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
            + +  E    T +        +A G+ +L     +  VHRD+ + N MLD  F  K+ D
Sbjct: 121 RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 497 FGLAR--------LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
           FGLAR         V +  G++  V      +MA E   T K + +SDV+SFG++  E+ 
Sbjct: 178 FGLARDMLDKEFDSVHNKTGAKLPV-----KWMALESLQTQKFTTKSDVWSFGVLLWELM 232
Query: 549 CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHP 608
               P  P      ++    V+ L G  +LL+   P  C D        L  V L C HP
Sbjct: 233 TRGAPPYPDVNTFDIT----VYLLQGR-RLLQ---PEYCPD-------PLYEVMLKCWHP 277
Query: 609 DENLRPSIRQVI 620
              +RPS  +++
Sbjct: 278 KAEMRPSFSELV 289

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 10/177 (5%)
Query: 376 TNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEK--KELLLVYEFMP 432
           T   +AVK + +G    ++  +  E++I+  L H ++V+  G C ++  K + LV E++P
Sbjct: 36  TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 95
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            GSL  +L +    L     +  AQ +  G+ YL     Q  +HR + + N++LD++   
Sbjct: 96  LGSLRDYLPRHCVGLAQLLLF--AQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLV 150
Query: 493 KIGDFGLARLVEHAKGSQTTVLAG--TMGYMAPECATTGKASKESDVYSFGIVALEI 547
           KIGDFGLA+ V            G   + + APEC    K    SDV+SFG+   E+
Sbjct: 151 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYEL 207

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 9/183 (4%)
Query: 376 TNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +AV+ +  +Q +   +++   EV+I+  L H N+V+L      +K L LV E+   
Sbjct: 38  TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G +  +L     +   E R K  Q + S + Y  +++   +VHRD+K+ N++LD++ N K
Sbjct: 98  GEVFDYLVAHGRMKEKEARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIK 153
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRK 552
           I DFG +   E   G++     G+  Y APE     K    E DV+S G++   +  G  
Sbjct: 154 IADFGFSN--EFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 553 PIN 555
           P +
Sbjct: 212 PFD 214

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 87/164 (53%), Gaps = 9/164 (5%)
Query: 393 IKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFR 452
           ++    E++I+  L H  LV L     +++++ +V + +  G L  HL ++N     E  
Sbjct: 59  VRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL-QQNVHFKEETV 117
Query: 453 YKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT 512
                +L   L YLQ    Q ++HRD+K  NI+LD + +  I DF +A ++   + +Q T
Sbjct: 118 KLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAML--PRETQIT 172
Query: 513 VLAGTMGYMAPECATTGKASKES---DVYSFGIVALEIACGRKP 553
            +AGT  YMAPE  ++ K +  S   D +S G+ A E+  GR+P
Sbjct: 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 6/180 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           +ET   +A+K+V   S   ++E   E+ I+ +    ++V+  G   +  +L +V E+   
Sbjct: 51  KETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGA 108
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           GS+   +   N  LT +    I Q    GL YL    +   +HRDIK+ NI+L++  +AK
Sbjct: 109 GSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAK 165
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           + DFG+A  +      +  V+ GT  +MAPE       +  +D++S GI A+E+A G+ P
Sbjct: 166 LADFGVAGQLTDXMAKRNXVI-GTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 109/232 (46%), Gaps = 16/232 (6%)
Query: 347 LALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIK-EYASEVKIISR 405
           + L  +DF    +L             + +   +A K +    K  I+ +   E++++  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
                +V   G  +   E+ +  E M  GSLD  + K+   +  +   K++  +  GL Y
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSIAVIKGLTY 119
Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPE 524
           L+E+ +  ++HRD+K SNI+++S    K+ DFG++ +L++    S      GT  YM+PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPE 173
Query: 525 CATTGKASKESDVYSFGIVALEIACGRKPINP-------KAPQGQVSLLQWV 569
                  S +SD++S G+  +E+A GR PI P       + P     LL ++
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYI 225

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 17/189 (8%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLG-WCHEKKELLLVYEFMPNGSLDS 438
           +AVK +   +    + + +E  ++++LRH NLVQLLG    EK  L +V E+M  GSL  
Sbjct: 38  VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 95
Query: 439 HL-FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
           +L  +  S+L  +   K + D+   + YL+       VHRD+ + N+++  +  AK+ DF
Sbjct: 96  YLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDF 152
Query: 498 GLARLVEHAKGSQTTVLAGTM--GYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPI 554
           GL +    A  +Q T   G +   + APE       S +SDV+SFGI+  EI + GR P 
Sbjct: 153 GLTK---EASSTQDT---GKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
Query: 555 NPKAPQGQV 563
            P+ P   V
Sbjct: 207 -PRIPLKDV 214

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 95/192 (49%), Gaps = 26/192 (13%)
Query: 377 NSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKK------ELLLVYE 429
           N Y+AVK      KQ  + EY  EV  +  ++H N++Q +G   EK+      +L L+  
Sbjct: 47  NEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIG--AEKRGTSVDVDLWLITA 102
Query: 430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE-------WEQCVVHRDIKSS 482
           F   GSL    F + ++++W     IA+ +A GL YL E+        +  + HRDIKS 
Sbjct: 103 FHEKGSLSD--FLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSK 160
Query: 483 NIMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTG-----KASKESD 536
           N++L +N  A I DFGLA   E  K +  T    GT  YMAPE           A    D
Sbjct: 161 NVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRID 220
Query: 537 VYSFGIVALEIA 548
           +Y+ G+V  E+A
Sbjct: 221 MYAMGLVLWELA 232

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 120/248 (48%), Gaps = 25/248 (10%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K++   S++  K +  E++ +SR+ H N+V+L G C     + LV E+   GSL + 
Sbjct: 35  VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC--LNPVCLVMEYAEGGSLYNV 90
Query: 440 LFKENSLLTWEFRYKIAQDL--ASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA-KIGD 496
           L     L  +   + ++  L  + G+ YL     + ++HRD+K  N++L +     KI D
Sbjct: 91  LHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 150
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINP 556
           FG A  ++    +  T   G+  +MAPE       S++ DV+S+GI+  E+   RKP + 
Sbjct: 151 FGTACDIQ----THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 206
Query: 557 KAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSI 616
               G    + W      NG       P L ++   + IE LM     C   D + RPS+
Sbjct: 207 IG--GPAFRIMWA---VHNG-----TRPPLIKNLP-KPIESLMTR---CWSKDPSQRPSM 252
Query: 617 RQVIHVLN 624
            +++ ++ 
Sbjct: 253 EEIVKIMT 260

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 120/248 (48%), Gaps = 25/248 (10%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +A+K++   S++  K +  E++ +SR+ H N+V+L G C     + LV E+   GSL + 
Sbjct: 34  VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC--LNPVCLVMEYAEGGSLYNV 89
Query: 440 LFKENSLLTWEFRYKIAQDL--ASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA-KIGD 496
           L     L  +   + ++  L  + G+ YL     + ++HRD+K  N++L +     KI D
Sbjct: 90  LHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 149
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINP 556
           FG A  ++    +  T   G+  +MAPE       S++ DV+S+GI+  E+   RKP + 
Sbjct: 150 FGTACDIQ----THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205
Query: 557 KAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSI 616
               G    + W      NG       P L ++   + IE LM     C   D + RPS+
Sbjct: 206 IG--GPAFRIMWA---VHNG-----TRPPLIKNLP-KPIESLMTR---CWSKDPSQRPSM 251
Query: 617 RQVIHVLN 624
            +++ ++ 
Sbjct: 252 EEIVKIMT 259

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 114/244 (46%), Gaps = 25/244 (10%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK + +GS     E+  E + + +L H  LV+  G C ++  + +V E++ NG L ++
Sbjct: 35  VAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNY 93
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
           L      L      ++  D+  G+ +L+       +HRD+ + N ++D +   K+ DFG+
Sbjct: 94  LRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGM 150
Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKA 558
            R V   +   +      + + APE     K S +SDV++FGI+  E+ + G+ P     
Sbjct: 151 TRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMP----- 205
Query: 559 PQGQVSLLQWVWDLYGNGKLLEAVDP--RLCRDFDGQQIERLMIVGLWCAHPDENLRPSI 616
                      +DLY N +++  V    RL R          ++   W   P++  RP+ 
Sbjct: 206 -----------YDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEK--RPTF 252
Query: 617 RQVI 620
           +Q++
Sbjct: 253 QQLL 256

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 9/212 (4%)
Query: 347 LALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIK-EYASEVKIISR 405
           + L  +DF    +L             + +   +A K +    K  I+ +   E++++  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
                +V   G  +   E+ +  E M  GSLD  + K+   +  +   K++  +  GL Y
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSIAVIKGLTY 119
Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPE 524
           L+E+ +  ++HRD+K SNI+++S    K+ DFG++ +L++    S      GT  YM+PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPE 173
Query: 525 CATTGKASKESDVYSFGIVALEIACGRKPINP 556
                  S +SD++S G+  +E+A GR PI P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 9/212 (4%)
Query: 347 LALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIK-EYASEVKIISR 405
           + L  +DF    +L             + +   +A K +    K  I+ +   E++++  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
                +V   G  +   E+ +  E M  GSLD  + K+   +  +   K++  +  GL Y
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSIAVIKGLTY 119
Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPE 524
           L+E+ +  ++HRD+K SNI+++S    K+ DFG++ +L++    S      GT  YM+PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPE 173
Query: 525 CATTGKASKESDVYSFGIVALEIACGRKPINP 556
                  S +SD++S G+  +E+A GR PI P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 29/263 (11%)
Query: 376 TNSYIAVKRV-SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KELLLVYEFMP 432
           T   +AVK + +    Q    +  E+ I+  L H ++++  G C ++  K L LV E++P
Sbjct: 42  TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            GSL  +L + +  L     +  AQ +  G+ YL     Q  +HR++ + N++LD++   
Sbjct: 102 LGSLRDYLPRHSIGLAQLLLF--AQQICEGMAYLHS---QHYIHRNLAARNVLLDNDRLV 156
Query: 493 KIGDFGLARLVEHAKGSQTTVLAG--TMGYMAPECATTGKASKESDVYSFGIVALEI--A 548
           KIGDFGLA+ V            G   + + APEC    K    SDV+SFG+   E+   
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH 216
Query: 549 CGRKPINPKA-------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
           C      P          QGQ+++L+ + +L   G+ L   D   C      ++  LM  
Sbjct: 217 CDSSQSPPTKFLELIGIAQGQMTVLR-LTELLERGERLPRPDKCPC------EVYHLMKN 269
Query: 602 GLWCAHPDENLRPSIRQVIHVLN 624
              C   + + RP+   +I +L 
Sbjct: 270 ---CWETEASFRPTFENLIPILK 289

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 5/160 (3%)
Query: 394 KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY 453
           ++ + E+ I   L H+++V   G+  +   + +V E     SL     +  +L   E RY
Sbjct: 86  EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 145
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
            + Q +  G  YL       V+HRD+K  N+ L+ +   KIGDFGLA  VE+  G +  V
Sbjct: 146 YLRQ-IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKV 200
Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           L GT  Y+APE  +    S E DV+S G +   +  G+ P
Sbjct: 201 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 29/263 (11%)
Query: 376 TNSYIAVKRV-SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KELLLVYEFMP 432
           T   +AVK + +    Q    +  E+ I+  L H ++++  G C ++  K L LV E++P
Sbjct: 42  TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            GSL  +L + +  L     +  AQ +  G+ YL     Q  +HR++ + N++LD++   
Sbjct: 102 LGSLRDYLPRHSIGLAQLLLF--AQQICEGMAYLHA---QHYIHRNLAARNVLLDNDRLV 156
Query: 493 KIGDFGLARLVEHAKGSQTTVLAG--TMGYMAPECATTGKASKESDVYSFGIVALEIA-- 548
           KIGDFGLA+ V            G   + + APEC    K    SDV+SFG+   E+   
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH 216
Query: 549 CGRKPINPKA-------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
           C      P          QGQ+++L+ + +L   G+ L   D   C      ++  LM  
Sbjct: 217 CDSSQSPPTKFLELIGIAQGQMTVLR-LTELLERGERLPRPDKCPC------EVYHLMKN 269
Query: 602 GLWCAHPDENLRPSIRQVIHVLN 624
              C   + + RP+   +I +L 
Sbjct: 270 ---CWETEASFRPTFENLIPILK 289

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 9/212 (4%)
Query: 347 LALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIK-EYASEVKIISR 405
           + L  +DF    +L             + +   +A K +    K  I+ +   E++++  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
                +V   G  +   E+ +  E M  GSLD  + K+   +  +   K++  +  GL Y
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSIAVIKGLTY 119
Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPE 524
           L+E+ +  ++HRD+K SNI+++S    K+ DFG++ +L++    S      GT  YM+PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPE 173
Query: 525 CATTGKASKESDVYSFGIVALEIACGRKPINP 556
                  S +SD++S G+  +E+A GR PI P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 9/212 (4%)
Query: 347 LALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIK-EYASEVKIISR 405
           + L  +DF    +L             + +   +A K +    K  I+ +   E++++  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
                +V   G  +   E+ +  E M  GSLD  + K+   +  +   K++  +  GL Y
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSIAVIKGLTY 119
Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPE 524
           L+E+ +  ++HRD+K SNI+++S    K+ DFG++ +L++    S      GT  YM+PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPE 173
Query: 525 CATTGKASKESDVYSFGIVALEIACGRKPINP 556
                  S +SD++S G+  +E+A GR PI P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T + +AVK++        +++  E++I+  L    +V+  G  +   + EL LV E++P+
Sbjct: 35  TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPS 94
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G L   L +  + L        +  +  G+ YL     +CV HRD+ + NI+++S  + K
Sbjct: 95  GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR--RCV-HRDLAARNILVESEAHVK 151
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI 547
           I DFGLA+L+   K        G   + + APE  +    S++SDV+SFG+V  E+
Sbjct: 152 IADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E++++       +V   G  +   E+ +  E M  GSLD  + K+   +  +   K++  
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSIA 174
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGT 517
           +  GL YL+E+ +  ++HRD+K SNI+++S    K+ DFG++ +L++    S      GT
Sbjct: 175 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGT 228
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINP 556
             YM+PE       S +SD++S G+  +E+A GR PI P
Sbjct: 229 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 267

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 5/160 (3%)
Query: 394 KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY 453
           ++ + E+ I   L H+++V   G+  +   + +V E     SL     +  +L   E RY
Sbjct: 84  EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 143
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
            + Q +  G  YL       V+HRD+K  N+ L+ +   KIGDFGLA  VE+  G +  V
Sbjct: 144 YLRQ-IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKV 198
Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           L GT  Y+APE  +    S E DV+S G +   +  G+ P
Sbjct: 199 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 12/185 (6%)
Query: 376 TNSYIAVK---RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           T   +AVK   R    S   + +   E++ +   RH ++++L        ++ +V E++ 
Sbjct: 40  TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS 99
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L  ++ K   L   E R ++ Q + SG+ Y        VVHRD+K  N++LD++ NA
Sbjct: 100 GGELFDYICKNGRLDEKESR-RLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNA 155
Query: 493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK--ASKESDVYSFGIVALEIACG 550
           KI DFGL+ ++  + G       G+  Y APE   +G+  A  E D++S G++   + CG
Sbjct: 156 KIADFGLSNMM--SDGEFLRXSCGSPNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCG 212
Query: 551 RKPIN 555
             P +
Sbjct: 213 TLPFD 217

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 5/160 (3%)
Query: 394 KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY 453
           ++ + E+ I   L H+++V   G+  +   + +V E     SL     +  +L   E RY
Sbjct: 60  EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 119
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
            + Q +  G  YL       V+HRD+K  N+ L+ +   KIGDFGLA  VE+  G +  V
Sbjct: 120 YLRQ-IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKV 174
Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           L GT  Y+APE  +    S E DV+S G +   +  G+ P
Sbjct: 175 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 376 TNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +AVK +  +Q +   +++   EV+I   L H N+V+L      +K L LV E+   
Sbjct: 38  TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASG 97
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G +  +L         E R K  Q + S + Y  +++   +VHRD+K+ N++LD++ N K
Sbjct: 98  GEVFDYLVAHGRXKEKEARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADXNIK 153
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGRK 552
           I DFG +   E   G++     G   Y APE     K    E DV+S G++   +  G  
Sbjct: 154 IADFGFSN--EFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 553 PIN 555
           P +
Sbjct: 212 PFD 214

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 9/183 (4%)
Query: 376 TNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K +  +Q +   +++   EV+I+  L H N+V+L      +K L L+ E+   
Sbjct: 36  TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 95
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G +  +L     +   E R K  Q + S + Y  ++    +VHRD+K+ N++LD++ N K
Sbjct: 96  GEVFDYLVAHGRMKEKEARSKFRQ-IVSAVQYCHQKR---IVHRDLKAENLLLDADMNIK 151
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGRK 552
           I DFG +   E   G +     G+  Y APE     K    E DV+S G++   +  G  
Sbjct: 152 IADFGFSN--EFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 209
Query: 553 PIN 555
           P +
Sbjct: 210 PFD 212

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 101/192 (52%), Gaps = 9/192 (4%)
Query: 374 RETNSYIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R+    +A+K + QG+++   +E   E +I+ +L +  +V+L+G C + + L+LV E   
Sbjct: 34  RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAG 92
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   L  +   +      ++   ++ G+ YL+E   +  VHRD+ + N++L +   A
Sbjct: 93  GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYA 149
Query: 493 KIGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALE-IAC 549
           KI DFGL++ +       T   AG   + + APEC    K S  SDV+S+G+   E ++ 
Sbjct: 150 KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY 209
Query: 550 GRKPINP-KAPQ 560
           G+KP    K P+
Sbjct: 210 GQKPYKKMKGPE 221

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Query: 349 LATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLR 407
           L  +DF    +L             + +   +A K +    K  I+ +   E++++    
Sbjct: 30  LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 89
Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
              +V   G  +   E+ +  E M  GSLD  + K+   +  +   K++  +  GL YL+
Sbjct: 90  SPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSIAVIKGLTYLR 148
Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPECA 526
           E+ +  ++HRD+K SNI+++S    K+ DFG++ +L++    S      GT  YM+PE  
Sbjct: 149 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERL 202
Query: 527 TTGKASKESDVYSFGIVALEIACGRKPINP 556
                S +SD++S G+  +E+A GR PI P
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 35/264 (13%)
Query: 375 ETNSYIAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +AVK V++  S +   E+ +E  ++      ++V+LLG   + +  L+V E M +
Sbjct: 45  EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 104
Query: 434 GSLDSHLFK-----ENSL----LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       EN+      T +   ++A ++A G+ YL     +  VHRD+ + N 
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNC 161
Query: 485 MLDSNFNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +       KG +  +    + +MAPE    G  +  SD++SF
Sbjct: 162 MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL---PVRWMAPESLKDGVFTTSSDMWSF 218
Query: 541 GIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           G+V  EI    +   P        +L++V D    G  L+   P  C        ER+  
Sbjct: 219 GVVLWEITSLAE--QPYQGLSNEQVLKFVMD----GGYLD--QPDNCP-------ERVTD 263
Query: 601 VGLWCAHPDENLRPSIRQVIHVLN 624
           +   C   + N+RP+  +++++L 
Sbjct: 264 LMRMCWQFNPNMRPTFLEIVNLLK 287

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 376 TNSYIAVKRV-SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KELLLVYEFMP 432
           T   +AVK + +    Q    +  E+ I+  L H ++++  G C +     L LV E++P
Sbjct: 59  TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP 118
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            GSL  +L + +  L     +  AQ +  G+ YL     Q  +HRD+ + N++LD++   
Sbjct: 119 LGSLRDYLPRHSIGLAQLLLF--AQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLV 173
Query: 493 KIGDFGLARLVEHAKGSQTTVLAG--TMGYMAPECATTGKASKESDVYSFGIVALEI 547
           KIGDFGLA+ V            G   + + APEC    K    SDV+SFG+   E+
Sbjct: 174 KIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 376 TNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K +  +Q +   +++   EV+I+  L H N+V+L      +K L L+ E+   
Sbjct: 39  TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 98
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G +  +L     +   E R K  Q + S + Y  ++    +VHRD+K+ N++LD++ N K
Sbjct: 99  GEVFDYLVAHGRMKEKEARSKFRQ-IVSAVQYCHQKR---IVHRDLKAENLLLDADMNIK 154
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGRK 552
           I DFG +   E   G +     G   Y APE     K    E DV+S G++   +  G  
Sbjct: 155 IADFGFSN--EFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 212
Query: 553 PIN 555
           P +
Sbjct: 213 PFD 215

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 35/266 (13%)
Query: 375 ETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +A+K V++ +    + E+ +E  ++      ++V+LLG   + +  L++ E M  
Sbjct: 38  EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 97
Query: 434 GSLDSHL------FKENSLL---TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       + N +L   +     ++A ++A G+ YL        VHRD+ + N 
Sbjct: 98  GDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNC 154
Query: 485 MLDSNFNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +       KG +  +    + +M+PE    G  +  SDV+SF
Sbjct: 155 MVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL---PVRWMSPESLKDGVFTTYSDVWSF 211
Query: 541 GIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           G+V  EIA   +   P        +L++V +    G LL+   P  C D        L+ 
Sbjct: 212 GVVLWEIATLAE--QPYQGLSNEQVLRFVME----GGLLD--KPDNCPDM-------LLE 256
Query: 601 VGLWCAHPDENLRPSIRQVIHVLNFE 626
           +   C   +  +RPS  ++I  +  E
Sbjct: 257 LMRMCWQYNPKMRPSFLEIISSIKEE 282

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 116/243 (47%), Gaps = 23/243 (9%)
Query: 380 IAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           + +K +   S +Q  +     +  I  L H ++V+LLG C     L LV +++P GSL  
Sbjct: 63  VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLD 121
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           H+ +    L  +        +A G+ YL+E     +VHR++ + N++L S    ++ DFG
Sbjct: 122 HVRQHRGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFG 178
Query: 499 LARLVEHAKGSQTTVLAGT-MGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINP 556
           +A L+           A T + +MA E    GK + +SDV+S+G+   E+   G +P   
Sbjct: 179 VADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG 238
Query: 557 KAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSI 616
                    L  V DL   G+ L    P++C       I+  M++ + C   DEN+RP+ 
Sbjct: 239 LR-------LAEVPDLLEKGERL--AQPQIC------TIDVYMVM-VKCWMIDENIRPTF 282
Query: 617 RQV 619
           +++
Sbjct: 283 KEL 285

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 98/184 (53%), Gaps = 8/184 (4%)
Query: 374 RETNSYIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R+    +A+K + QG+++   +E   E +I+ +L +  +V+L+G C + + L+LV E   
Sbjct: 360 RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAG 418
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   L  +   +      ++   ++ G+ YL+E   +  VHR++ + N++L +   A
Sbjct: 419 GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYA 475
Query: 493 KIGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALE-IAC 549
           KI DFGL++ +       T   AG   + + APEC    K S  SDV+S+G+   E ++ 
Sbjct: 476 KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY 535
Query: 550 GRKP 553
           G+KP
Sbjct: 536 GQKP 539

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 394 KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY 453
           ++ + E+ I   L H+++V   G+  +   + +V E     SL     +  +L   E RY
Sbjct: 62  EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 121
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
            + Q +  G  YL       V+HRD+K  N+ L+ +   KIGDFGLA  VE+  G +   
Sbjct: 122 YLRQ-IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKT 176
Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           L GT  Y+APE  +    S E DV+S G +   +  G+ P
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 394 KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY 453
           ++ + E+ I   L H+++V   G+  +   + +V E     SL     +  +L   E RY
Sbjct: 62  EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 121
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
            + Q +  G  YL       V+HRD+K  N+ L+ +   KIGDFGLA  VE+  G +   
Sbjct: 122 YLRQ-IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKT 176
Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           L GT  Y+APE  +    S E DV+S G +   +  G+ P
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 20/188 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +A+K V++ +    + E+ +E  ++      ++V+LLG   + +  L++ E M  
Sbjct: 47  EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 106
Query: 434 GSLDSHL------FKENSLL---TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       + N +L   +     ++A ++A G+ YL        VHRD+ + N 
Sbjct: 107 GDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNC 163
Query: 485 MLDSNFNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +       KG +  +    + +M+PE    G  +  SDV+SF
Sbjct: 164 MVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL---PVRWMSPESLKDGVFTTYSDVWSF 220
Query: 541 GIVALEIA 548
           G+V  EIA
Sbjct: 221 GVVLWEIA 228

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 394 KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY 453
           ++ + E+ I   L H+++V   G+  +   + +V E     SL     +  +L   E RY
Sbjct: 66  EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 125
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
            + Q +  G  YL       V+HRD+K  N+ L+ +   KIGDFGLA  VE+  G +   
Sbjct: 126 YLRQ-IVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKT 180
Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           L GT  Y+APE  +    S E DV+S G +   +  G+ P
Sbjct: 181 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 35/266 (13%)
Query: 375 ETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +A+K V++ +    + E+ +E  ++      ++V+LLG   + +  L++ E M  
Sbjct: 53  EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 112
Query: 434 GSLDSHL------FKENSLL---TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       + N +L   +     ++A ++A G+ YL        VHRD+ + N 
Sbjct: 113 GDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNC 169
Query: 485 MLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +     + KG +  +    + +M+PE    G  +  SDV+SF
Sbjct: 170 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---PVRWMSPESLKDGVFTTYSDVWSF 226
Query: 541 GIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           G+V  EIA   +   P        +L++V +    G LL+   P  C D        L  
Sbjct: 227 GVVLWEIATLAE--QPYQGLSNEQVLRFVME----GGLLD--KPDNCPDM-------LFE 271
Query: 601 VGLWCAHPDENLRPSIRQVIHVLNFE 626
           +   C   +  +RPS  ++I  +  E
Sbjct: 272 LMRMCWQYNPKMRPSFLEIISSIKEE 297

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 41/231 (17%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +   +    KE   SE+KI+S L +H N+V LLG C     +L++ E+   G L 
Sbjct: 79  VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 438 SHLFKENSLLTWEFRYKIAQDLAS--GLLYLQEEWEQCV--------VHRDIKSSNIMLD 487
           + L +++ +L  +  + IA   AS   LL+   +  Q +        +HRD+ + N++L 
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 198
Query: 488 SNFNAKIGDFGLARLVEHAKGSQTTVLAGT----MGYMAPECATTGKASKESDVYSFGIV 543
           +   AKIGDFGLAR + +       ++ G     + +MAPE       + +SDV+S+GI+
Sbjct: 199 NGHVAKIGDFGLARDIMN---DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 544 ALEI-ACGRKP-----INPK----------------APQGQVSLLQWVWDL 572
             EI + G  P     +N K                AP+   S++Q  W L
Sbjct: 256 LWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL 306

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK +  G+   ++ +  E  ++  L+H  LV+L      ++ + ++ E+M  GSL   
Sbjct: 40  VAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDF 98
Query: 440 LFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L   E   +        +  +A G+ Y++    +  +HRD++++N+++  +   KI DFG
Sbjct: 99  LKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFG 155
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           LAR++E  + +        + + APE    G  + +SDV+SFGI+  EI   G+ P
Sbjct: 156 LARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 35/266 (13%)
Query: 375 ETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +A+K V++ +    + E+ +E  ++      ++V+LLG   + +  L++ E M  
Sbjct: 47  EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 106
Query: 434 GSLDSHL------FKENSLL---TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       + N +L   +     ++A ++A G+ YL        VHRD+ + N 
Sbjct: 107 GDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNC 163
Query: 485 MLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +     + KG +  +    + +M+PE    G  +  SDV+SF
Sbjct: 164 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---PVRWMSPESLKDGVFTTYSDVWSF 220
Query: 541 GIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           G+V  EIA   +   P        +L++V +    G LL+   P  C D        L  
Sbjct: 221 GVVLWEIATLAE--QPYQGLSNEQVLRFVME----GGLLD--KPDNCPDM-------LFE 265
Query: 601 VGLWCAHPDENLRPSIRQVIHVLNFE 626
           +   C   +  +RPS  ++I  +  E
Sbjct: 266 LMRMCWQYNPKMRPSFLEIISSIKEE 291

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 35/266 (13%)
Query: 375 ETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +A+K V++ +    + E+ +E  ++      ++V+LLG   + +  L++ E M  
Sbjct: 46  EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 105
Query: 434 GSLDSHL------FKENSLL---TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       + N +L   +     ++A ++A G+ YL        VHRD+ + N 
Sbjct: 106 GDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNC 162
Query: 485 MLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +     + KG +  +    + +M+PE    G  +  SDV+SF
Sbjct: 163 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---PVRWMSPESLKDGVFTTYSDVWSF 219
Query: 541 GIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           G+V  EIA   +   P        +L++V +    G LL+   P  C D        L  
Sbjct: 220 GVVLWEIATLAE--QPYQGLSNEQVLRFVME----GGLLD--KPDNCPDM-------LFE 264
Query: 601 VGLWCAHPDENLRPSIRQVIHVLNFE 626
           +   C   +  +RPS  ++I  +  E
Sbjct: 265 LMRMCWQYNPKMRPSFLEIISSIKEE 290

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 116/243 (47%), Gaps = 23/243 (9%)
Query: 380 IAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           + +K +   S +Q  +     +  I  L H ++V+LLG C     L LV +++P GSL  
Sbjct: 45  VCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLD 103
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           H+ +    L  +        +A G+ YL+E     +VHR++ + N++L S    ++ DFG
Sbjct: 104 HVRQHRGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFG 160
Query: 499 LARLVEHAKGSQTTVLAGT-MGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINP 556
           +A L+           A T + +MA E    GK + +SDV+S+G+   E+   G +P   
Sbjct: 161 VADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG 220
Query: 557 KAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSI 616
                    L  V DL   G+ L    P++C       I+  M++ + C   DEN+RP+ 
Sbjct: 221 LR-------LAEVPDLLEKGERL--AQPQIC------TIDVYMVM-VKCWMIDENIRPTF 264
Query: 617 RQV 619
           +++
Sbjct: 265 KEL 267

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 35/266 (13%)
Query: 375 ETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +A+K V++ +    + E+ +E  ++      ++V+LLG   + +  L++ E M  
Sbjct: 75  EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 134
Query: 434 GSLDSHL------FKENSLL---TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       + N +L   +     ++A ++A G+ YL        VHRD+ + N 
Sbjct: 135 GDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNC 191
Query: 485 MLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +     + KG +  +    + +M+PE    G  +  SDV+SF
Sbjct: 192 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---PVRWMSPESLKDGVFTTYSDVWSF 248
Query: 541 GIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           G+V  EIA   +   P        +L++V +    G LL+   P  C D        L  
Sbjct: 249 GVVLWEIATLAE--QPYQGLSNEQVLRFVME----GGLLD--KPDNCPDM-------LFE 293
Query: 601 VGLWCAHPDENLRPSIRQVIHVLNFE 626
           +   C   +  +RPS  ++I  +  E
Sbjct: 294 LMRMCWQYNPKMRPSFLEIISSIKEE 319

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 35/266 (13%)
Query: 375 ETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +A+K V++ +    + E+ +E  ++      ++V+LLG   + +  L++ E M  
Sbjct: 44  EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 103
Query: 434 GSLDSHL------FKENSLL---TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       + N +L   +     ++A ++A G+ YL        VHRD+ + N 
Sbjct: 104 GDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNC 160
Query: 485 MLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +     + KG +  +    + +M+PE    G  +  SDV+SF
Sbjct: 161 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---PVRWMSPESLKDGVFTTYSDVWSF 217
Query: 541 GIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           G+V  EIA   +   P        +L++V +    G LL+   P  C D        L  
Sbjct: 218 GVVLWEIATLAE--QPYQGLSNEQVLRFVME----GGLLD--KPDNCPDM-------LFE 262
Query: 601 VGLWCAHPDENLRPSIRQVIHVLNFE 626
           +   C   +  +RPS  ++I  +  E
Sbjct: 263 LMRMCWQYNPKMRPSFLEIISSIKEE 288

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 8/208 (3%)
Query: 349 LATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQG---SKQGIKEYASEVKIISR 405
           +  NDF+  + L             + T  Y A+K + +    +K  +    +E +++  
Sbjct: 2   VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
            RH  L  L         L  V E+   G L  HL +E        R+  A+ + S L Y
Sbjct: 62  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE-IVSALEY 120
Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           L     + VV+RDIK  N+MLD + + KI DFGL +    + G+      GT  Y+APE 
Sbjct: 121 LHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEV 176
Query: 526 ATTGKASKESDVYSFGIVALEIACGRKP 553
                  +  D +  G+V  E+ CGR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 35/266 (13%)
Query: 375 ETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +A+K V++ +    + E+ +E  ++      ++V+LLG   + +  L++ E M  
Sbjct: 53  EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 112
Query: 434 GSLDSHL------FKENSLL---TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L         N +L   +     ++A ++A G+ YL        VHRD+ + N 
Sbjct: 113 GDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNC 169
Query: 485 MLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +     + KG +  +    + +M+PE    G  +  SDV+SF
Sbjct: 170 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---PVRWMSPESLKDGVFTTYSDVWSF 226
Query: 541 GIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           G+V  EIA   +   P        +L++V +    G LL+   P  C D        L  
Sbjct: 227 GVVLWEIATLAE--QPYQGLSNEQVLRFVME----GGLLD--KPDNCPDM-------LFE 271
Query: 601 VGLWCAHPDENLRPSIRQVIHVLNFE 626
           +   C   +  +RPS  ++I  +  E
Sbjct: 272 LMRMCWQYNPKMRPSFLEIISSIKEE 297

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 35/266 (13%)
Query: 375 ETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +A+K V++ +    + E+ +E  ++      ++V+LLG   + +  L++ E M  
Sbjct: 46  EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 105
Query: 434 GSLDSHL------FKENSLL---TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       + N +L   +     ++A ++A G+ YL        VHRD+ + N 
Sbjct: 106 GDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNC 162
Query: 485 MLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +     + KG +  +    + +M+PE    G  +  SDV+SF
Sbjct: 163 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---PVRWMSPESLKDGVFTTYSDVWSF 219
Query: 541 GIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           G+V  EIA   +   P        +L++V +    G LL+   P  C D        L  
Sbjct: 220 GVVLWEIATLAE--QPYQGLSNEQVLRFVME----GGLLD--KPDNCPDM-------LFE 264
Query: 601 VGLWCAHPDENLRPSIRQVIHVLNFE 626
           +   C   +  +RPS  ++I  +  E
Sbjct: 265 LMRMCWQYNPKMRPSFLEIISSIKEE 290

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 8/208 (3%)
Query: 349 LATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQG---SKQGIKEYASEVKIISR 405
           +  NDF+  + L             + T  Y A+K + +    +K  +    +E +++  
Sbjct: 2   VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
            RH  L  L         L  V E+   G L  HL +E        R+  A+ + S L Y
Sbjct: 62  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE-IVSALEY 120
Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           L     + VV+RDIK  N+MLD + + KI DFGL +    + G+      GT  Y+APE 
Sbjct: 121 LHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEV 176
Query: 526 ATTGKASKESDVYSFGIVALEIACGRKP 553
                  +  D +  G+V  E+ CGR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 20/188 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +A+K V++ +    + E+ +E  ++      ++V+LLG   + +  L++ E M  
Sbjct: 40  EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 99
Query: 434 GSLDSHL------FKENSLL---TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       + N +L   +     ++A ++A G+ YL        VHRD+ + N 
Sbjct: 100 GDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNC 156
Query: 485 MLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +     + KG +  +    + +M+PE    G  +  SDV+SF
Sbjct: 157 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---PVRWMSPESLKDGVFTTYSDVWSF 213
Query: 541 GIVALEIA 548
           G+V  EIA
Sbjct: 214 GVVLWEIA 221

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 92/176 (52%), Gaps = 6/176 (3%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           +AVK +  G+   ++ +  E  ++  L+H  LV+L     +++ + ++ EFM  GSL   
Sbjct: 39  VAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDF 97
Query: 440 LFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           L   E   +        +  +A G+ Y++    +  +HRD++++N+++  +   KI DFG
Sbjct: 98  LKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFG 154
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           LAR++E  + +        + + APE    G  + +S+V+SFGI+  EI   G+ P
Sbjct: 155 LARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 12/185 (6%)
Query: 376 TNSYIAVK---RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           T   +AVK   R    S   + +   E++ +   RH ++++L        +  +V E++ 
Sbjct: 35  TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L  ++ K   +   E R ++ Q + S + Y        VVHRD+K  N++LD++ NA
Sbjct: 95  GGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNA 150
Query: 493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK--ASKESDVYSFGIVALEIACG 550
           KI DFGL+ ++   +  +T+   G+  Y APE   +G+  A  E D++S G++   + CG
Sbjct: 151 KIADFGLSNMMSDGEFLRTS--CGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCG 207
Query: 551 RKPIN 555
             P +
Sbjct: 208 TLPFD 212

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 8/208 (3%)
Query: 349 LATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQG---SKQGIKEYASEVKIISR 405
           +  NDF+  + L             + T  Y A+K + +    +K  +    +E +++  
Sbjct: 7   VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
            RH  L  L         L  V E+   G L  HL +E        R+  A+ + S L Y
Sbjct: 67  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE-IVSALEY 125
Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           L     + VV+RDIK  N+MLD + + KI DFGL +    + G+      GT  Y+APE 
Sbjct: 126 LHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEV 181
Query: 526 ATTGKASKESDVYSFGIVALEIACGRKP 553
                  +  D +  G+V  E+ CGR P
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 209

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T + +AVK++        +++  E++I+  L    +V+  G  +   ++ L LV E++P+
Sbjct: 38  TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 97
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G L   L +  + L        +  +  G+ YL     +CV HRD+ + NI+++S  + K
Sbjct: 98  GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR--RCV-HRDLAARNILVESEAHVK 154
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI 547
           I DFGLA+L+   K        G   + + APE  +    S++SDV+SFG+V  E+
Sbjct: 155 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T + +AVK++        +++  E++I+  L    +V+  G  +   ++ L LV E++P+
Sbjct: 39  TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 98
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G L   L +  + L        +  +  G+ YL     +CV HRD+ + NI+++S  + K
Sbjct: 99  GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR--RCV-HRDLAARNILVESEAHVK 155
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI 547
           I DFGLA+L+   K        G   + + APE  +    S++SDV+SFG+V  E+
Sbjct: 156 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 8/208 (3%)
Query: 349 LATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQG---SKQGIKEYASEVKIISR 405
           +  NDF+  + L             + T  Y A+K + +    +K  +    +E +++  
Sbjct: 2   VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
            RH  L  L         L  V E+   G L  HL +E        R+  A+ + S L Y
Sbjct: 62  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE-IVSALEY 120
Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           L     + VV+RDIK  N+MLD + + KI DFGL +    + G+      GT  Y+APE 
Sbjct: 121 LHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEV 176
Query: 526 ATTGKASKESDVYSFGIVALEIACGRKP 553
                  +  D +  G+V  E+ CGR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 8/208 (3%)
Query: 349 LATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQG---SKQGIKEYASEVKIISR 405
           +  NDF+  + L             + T  Y A+K + +    +K  +    +E +++  
Sbjct: 5   VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
            RH  L  L         L  V E+   G L  HL +E        R+  A+ + S L Y
Sbjct: 65  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE-IVSALEY 123
Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           L     + VV+RDIK  N+MLD + + KI DFGL +    + G+      GT  Y+APE 
Sbjct: 124 LHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEV 179
Query: 526 ATTGKASKESDVYSFGIVALEIACGRKP 553
                  +  D +  G+V  E+ CGR P
Sbjct: 180 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 207

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 385 VSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE--LLLVYEFMPNGSLDSHLFK 442
           +++  KQ +    SEV ++  L+H N+V+      ++    L +V E+   G L S + K
Sbjct: 44  MTEAEKQML---VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK 100
Query: 443 ---ENSLLTWEFRYKIAQDLASGL--LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
              E   L  EF  ++   L   L   + + +    V+HRD+K +N+ LD   N K+GDF
Sbjct: 101 GTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160
Query: 498 GLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           GLAR++ H      T   GT  YM+PE       +++SD++S G +  E+ C   P
Sbjct: 161 GLARILNHDTSFAKT-FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMP 214

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 375 ETNSYIAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +AVK V++  S +   E+ +E  ++      ++V+LLG   + +  L+V E M +
Sbjct: 45  EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 104
Query: 434 GSLDSHLFK-----ENSL----LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       EN+      T +   ++A ++A G+ YL     +  VHRD+ + N 
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNC 161
Query: 485 MLDSNFNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +       KG +  +    + +MAPE    G  +  SD++SF
Sbjct: 162 MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL---PVRWMAPESLKDGVFTTSSDMWSF 218
Query: 541 GIVALEI 547
           G+V  EI
Sbjct: 219 GVVLWEI 225

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 8/208 (3%)
Query: 349 LATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQG---SKQGIKEYASEVKIISR 405
           +  NDF+  + L             + T  Y A+K + +    +K  +    +E +++  
Sbjct: 2   VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
            RH  L  L         L  V E+   G L  HL +E        R+  A+ + S L Y
Sbjct: 62  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE-IVSALEY 120
Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           L     + VV+RDIK  N+MLD + + KI DFGL +    + G+      GT  Y+APE 
Sbjct: 121 LHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEV 176
Query: 526 ATTGKASKESDVYSFGIVALEIACGRKP 553
                  +  D +  G+V  E+ CGR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 375 ETNSYIAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +AVK V++  S +   E+ +E  ++      ++V+LLG   + +  L+V E M +
Sbjct: 42  EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 101
Query: 434 GSLDSHLFK-----ENSL----LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       EN+      T +   ++A ++A G+ YL     +  VHRD+ + N 
Sbjct: 102 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNC 158
Query: 485 MLDSNFNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +       KG +  +    + +MAPE    G  +  SD++SF
Sbjct: 159 MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL---PVRWMAPESLKDGVFTTSSDMWSF 215
Query: 541 GIVALEI 547
           G+V  EI
Sbjct: 216 GVVLWEI 222

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 21/201 (10%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           IA+K + +   +  +    E+ +   L+H+N+VQ LG   E   + +  E +P GSL + 
Sbjct: 36  IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL 95
Query: 440 L------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA- 492
           L       K+N      +  +I +    GL YL +     +VHRDIK  N+++++     
Sbjct: 96  LRSKWGPLKDNEQTIGFYTKQILE----GLKYLHDNQ---IVHRDIKGDNVLINTYSGVL 148
Query: 493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA--SKESDVYSFGIVALEIACG 550
           KI DFG ++ +       T    GT+ YMAPE    G     K +D++S G   +E+A G
Sbjct: 149 KISDFGTSKRLAGINPC-TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 207
Query: 551 RKPI----NPKAPQGQVSLLQ 567
           + P      P+A   +V + +
Sbjct: 208 KPPFYELGEPQAAMFKVGMFK 228

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 8/208 (3%)
Query: 349 LATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQG---SKQGIKEYASEVKIISR 405
           +  NDF+  + L             + T  Y A+K + +    +K  +    +E +++  
Sbjct: 2   VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
            RH  L  L         L  V E+   G L  HL +E        R+  A+ + S L Y
Sbjct: 62  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE-IVSALEY 120
Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           L     + VV+RDIK  N+MLD + + KI DFGL +    + G+      GT  Y+APE 
Sbjct: 121 LHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEV 176
Query: 526 ATTGKASKESDVYSFGIVALEIACGRKP 553
                  +  D +  G+V  E+ CGR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 20/188 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +A+K V++ +    + E+ +E  ++      ++V+LLG   + +  L++ E M  
Sbjct: 43  EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 102
Query: 434 GSLDSHL------FKENSLL---TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L         N +L   +     ++A ++A G+ YL        VHRD+ + N 
Sbjct: 103 GDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNC 159
Query: 485 MLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +     + KG +  +    + +M+PE    G  +  SDV+SF
Sbjct: 160 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---PVRWMSPESLKDGVFTTYSDVWSF 216
Query: 541 GIVALEIA 548
           G+V  EIA
Sbjct: 217 GVVLWEIA 224

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLVYEFMPN 433
           T + +AVK++        +++  E++I+  L    +V+  G  +   ++ L LV E++P+
Sbjct: 51  TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 110
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G L   L +  + L        +  +  G+ YL     +CV HRD+ + NI+++S  + K
Sbjct: 111 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR--RCV-HRDLAARNILVESEAHVK 167
Query: 494 IGDFGLARLVEHAKGSQTTVLAGT--MGYMAPECATTGKASKESDVYSFGIVALEI 547
           I DFGLA+L+   K        G   + + APE  +    S++SDV+SFG+V  E+
Sbjct: 168 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 35/263 (13%)
Query: 375 ETNSYIAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +AVK V++  S +   E+ +E  ++      ++V+LLG   + +  L+V E M +
Sbjct: 46  EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 105
Query: 434 GSLDSHLFK-----ENSL----LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       EN+      T +   ++A ++A G+ YL     +  VHR++ + N 
Sbjct: 106 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNC 162
Query: 485 MLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +     + KG +  +    + +MAPE    G  +  SD++SF
Sbjct: 163 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL---PVRWMAPESLKDGVFTTSSDMWSF 219
Query: 541 GIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           G+V  EI    +   P        +L++V D    G  L+   P  C        ER+  
Sbjct: 220 GVVLWEITSLAE--QPYQGLSNEQVLKFVMD----GGYLD--QPDNCP-------ERVTD 264
Query: 601 VGLWCAHPDENLRPSIRQVIHVL 623
           +   C   + N+RP+  +++++L
Sbjct: 265 LMRMCWQFNPNMRPTFLEIVNLL 287

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 92/194 (47%), Gaps = 29/194 (14%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISR--LRHRNLVQLLGWCHEKK------ELLLVY 428
           N ++AVK      KQ    + SE +I S   ++H NL+Q +    EK+      EL L+ 
Sbjct: 38  NDFVAVKIFPLQDKQS---WQSEREIFSTPGMKHENLLQFIA--AEKRGSNLEVELWLIT 92
Query: 429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC--------VVHRDIK 480
            F   GSL  +L  + +++TW     +A+ ++ GL YL E+   C        + HRD K
Sbjct: 93  AFHDKGSLTDYL--KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFK 150
Query: 481 SSNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTG-----KASKE 534
           S N++L S+  A + DFGLA   E  K    T    GT  YMAPE           A   
Sbjct: 151 SKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLR 210
Query: 535 SDVYSFGIVALEIA 548
            D+Y+ G+V  E+ 
Sbjct: 211 IDMYAMGLVLWELV 224

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 21/201 (10%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           IA+K + +   +  +    E+ +   L+H+N+VQ LG   E   + +  E +P GSL + 
Sbjct: 50  IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL 109
Query: 440 L------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA- 492
           L       K+N      +  +I +    GL YL +     +VHRDIK  N+++++     
Sbjct: 110 LRSKWGPLKDNEQTIGFYTKQILE----GLKYLHDNQ---IVHRDIKGDNVLINTYSGVL 162
Query: 493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA--SKESDVYSFGIVALEIACG 550
           KI DFG ++ +       T    GT+ YMAPE    G     K +D++S G   +E+A G
Sbjct: 163 KISDFGTSKRLAGINPC-TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 221
Query: 551 RKPI----NPKAPQGQVSLLQ 567
           + P      P+A   +V + +
Sbjct: 222 KPPFYELGEPQAAMFKVGMFK 242

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 385 VSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE--LLLVYEFMPNGSLDSHLFK 442
           +++  KQ +    SEV ++  L+H N+V+      ++    L +V E+   G L S + K
Sbjct: 44  MTEAEKQML---VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK 100
Query: 443 ---ENSLLTWEFRYKIAQDLASGL--LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
              E   L  EF  ++   L   L   + + +    V+HRD+K +N+ LD   N K+GDF
Sbjct: 101 GTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160
Query: 498 GLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           GLAR++ H   S      GT  YM+PE       +++SD++S G +  E+ C   P
Sbjct: 161 GLARILNH-DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMP 214

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 35/263 (13%)
Query: 375 ETNSYIAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +AVK V++  S +   E+ +E  ++      ++V+LLG   + +  L+V E M +
Sbjct: 45  EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 104
Query: 434 GSLDSHLFK-----ENSL----LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       EN+      T +   ++A ++A G+ YL     +  VHR++ + N 
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNC 161
Query: 485 MLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +     + KG +  +    + +MAPE    G  +  SD++SF
Sbjct: 162 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL---PVRWMAPESLKDGVFTTSSDMWSF 218
Query: 541 GIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           G+V  EI    +   P        +L++V D    G  L+   P  C        ER+  
Sbjct: 219 GVVLWEITSLAE--QPYQGLSNEQVLKFVMD----GGYLD--QPDNCP-------ERVTD 263
Query: 601 VGLWCAHPDENLRPSIRQVIHVL 623
           +   C   + N+RP+  +++++L
Sbjct: 264 LMRMCWQFNPNMRPTFLEIVNLL 286

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 38/250 (15%)
Query: 312 RKRKEGDEEDNQGFSEYIDDEFER----GAGPKRFPYKELALATNDFNDDQKLXXXXXXX 367
           RKR E      Q   E  DD+FE+    GAG     +K                      
Sbjct: 6   RKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK---------------------- 43
Query: 368 XXXXXXRETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLL 426
                 + +   +A K +    K  I+ +   E++++       +V   G  +   E+ +
Sbjct: 44  ---VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 100
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
             E M  GSLD  + K+   +  +   K++  +  GL YL+E+ +  ++HRD+K SNI++
Sbjct: 101 CMEHMDGGSLD-QVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 157
Query: 487 DSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
           +S    K+ DFG++ +L++    S      GT  YM+PE       S +SD++S G+  +
Sbjct: 158 NSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 213
Query: 546 EIACGRKPIN 555
           E+A GR PI 
Sbjct: 214 EMAVGRYPIG 223

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 20/187 (10%)
Query: 375 ETNSYIAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +AVK V++  S +   E+ +E  ++      ++V+LLG   + +  L+V E M +
Sbjct: 45  EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 104
Query: 434 GSLDSHLFK-----ENSL----LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       EN+      T +   ++A ++A G+ YL     +  VHRD+ + N 
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNC 161
Query: 485 MLDSNFNAKIGDFGLAR-LVEHA---KGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R + E A   KG +  +    + +MAPE    G  +  SD++SF
Sbjct: 162 MVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLL---PVRWMAPESLKDGVFTTSSDMWSF 218
Query: 541 GIVALEI 547
           G+V  EI
Sbjct: 219 GVVLWEI 225

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 20/187 (10%)
Query: 375 ETNSYIAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +AVK V++  S +   E+ +E  ++      ++V+LLG   + +  L+V E M +
Sbjct: 45  EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 104
Query: 434 GSLDSHLFK-----ENSL----LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       EN+      T +   ++A ++A G+ YL     +  VHRD+ + N 
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNC 161
Query: 485 MLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +     + KG +  +    + +MAPE    G  +  SD++SF
Sbjct: 162 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL---PVRWMAPESLKDGVFTTSSDMWSF 218
Query: 541 GIVALEI 547
           G+V  EI
Sbjct: 219 GVVLWEI 225

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 20/187 (10%)
Query: 375 ETNSYIAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +AVK V++  S +   E+ +E  ++      ++V+LLG   + +  L+V E M +
Sbjct: 44  EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 103
Query: 434 GSLDSHLFK-----ENSL----LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       EN+      T +   ++A ++A G+ YL     +  VHRD+ + N 
Sbjct: 104 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNC 160
Query: 485 MLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
           M+  +F  KIGDFG+ R +     + KG +  +    + +MAPE    G  +  SD++SF
Sbjct: 161 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL---PVRWMAPESLKDGVFTTSSDMWSF 217
Query: 541 GIVALEI 547
           G+V  EI
Sbjct: 218 GVVLWEI 224

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 111/231 (48%), Gaps = 41/231 (17%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +   +    KE   SE+KI+S L +H N+V LLG C     +L++ E+   G L 
Sbjct: 79  VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 438 SHLFKENSLLTWEFRYKIAQDLAS--GLLYLQEEWEQCV--------VHRDIKSSNIMLD 487
           + L +++ +L  +  + IA    S   LL+   +  Q +        +HRD+ + N++L 
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 198
Query: 488 SNFNAKIGDFGLARLVEHAKGSQTTVLAGT----MGYMAPECATTGKASKESDVYSFGIV 543
           +   AKIGDFGLAR + +       ++ G     + +MAPE       + +SDV+S+GI+
Sbjct: 199 NGHVAKIGDFGLARDIMN---DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 544 ALEI-ACGRKP-----INPK----------------APQGQVSLLQWVWDL 572
             EI + G  P     +N K                AP+   S++Q  W L
Sbjct: 256 LWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL 306

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 23/236 (9%)
Query: 350 ATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRH 408
           +++ F   +KL             + T  Y+A+K V   S++G    A  E+ ++  L+H
Sbjct: 3   SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 409 RNLVQLLGWCHEKKELLLVYEFMPN---GSLDSHLFK------ENSLLTWEFRYKIAQDL 459
            N+V+L    H + +L LV+EFM N     +DS          E +L+ + F++++ Q L
Sbjct: 63  ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKY-FQWQLLQGL 121
Query: 460 ASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG 519
           A          E  ++HRD+K  N++++     K+GDFGLAR       + ++ +  T+ 
Sbjct: 122 AFC-------HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLW 173
Query: 520 YMAPECATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG 574
           Y AP+     +  S   D++S G +  E+  G KP+ P     +   L+ ++D+ G
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITG-KPLFPGTNDEEQ--LKLIFDIMG 226

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 9/212 (4%)
Query: 349 LATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLR 407
           L  +DF    +L             + +   +A K +    K  I+ +   E++++    
Sbjct: 6   LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 65
Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
              +V   G  +   E+ +  E M  GSLD  + K+   +  +   K++  +  GL YL+
Sbjct: 66  SPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGRIPEQILGKVSIAVIKGLTYLR 124
Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPECA 526
           E+ +  ++HRD+K SNI+++S    K+ DFG++ +L++           GT  YM+PE  
Sbjct: 125 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----EMANEFVGTRSYMSPERL 178
Query: 527 TTGKASKESDVYSFGIVALEIACGRKPINPKA 558
                S +SD++S G+  +E+A GR P  P A
Sbjct: 179 QGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMA 210

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 11/183 (6%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           R    Y A+K + +     +K+      E  ++S + H  ++++ G   + +++ ++ ++
Sbjct: 28  RHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY 87
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G L S L K         ++  A ++   L YL     + +++RD+K  NI+LD N 
Sbjct: 88  IEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLHS---KDIIYRDLKPENILLDKNG 143
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
           + KI DFG A+ V       T  L GT  Y+APE  +T   +K  D +SFGI+  E+  G
Sbjct: 144 HIKITDFGFAKYVPDV----TYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
Query: 551 RKP 553
             P
Sbjct: 200 YTP 202

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 12/175 (6%)
Query: 383 KRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK 442
           K +++   QG  E   E+  +  LRH ++++L      K E+++V E+  N   D ++ +
Sbjct: 40  KVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQ 96
Query: 443 ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL 502
            + +   E R +  Q + S + Y        +VHRD+K  N++LD + N KI DFGL+ +
Sbjct: 97  RDKMSEQEAR-RFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNI 152
Query: 503 VEHAKGSQTTVLAGTMGYMAPECATTGK--ASKESDVYSFGIVALEIACGRKPIN 555
           +      +T+   G+  Y APE   +GK  A  E DV+S G++   + C R P +
Sbjct: 153 MTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 124/266 (46%), Gaps = 35/266 (13%)
Query: 375 ETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +A+K V++ +    + E+ +E  ++      ++V+LLG   + +  L++ E M  
Sbjct: 40  EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR 99
Query: 434 GSLDSHL------FKENSLL---TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           G L S+L       + N +L   +     ++A ++A G+ YL        VHRD+ + N 
Sbjct: 100 GDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNC 156
Query: 485 MLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
            +  +F  KIGDFG+ R +     + KG +  +    + +M+PE    G  +  SDV+SF
Sbjct: 157 XVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---PVRWMSPESLKDGVFTTYSDVWSF 213
Query: 541 GIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           G+V  EIA   +   P        +L++V +    G LL+   P  C D        L+ 
Sbjct: 214 GVVLWEIATLAE--QPYQGLSNEQVLRFVME----GGLLD--KPDNCPDM-------LLE 258
Query: 601 VGLWCAHPDENLRPSIRQVIHVLNFE 626
           +   C   +  +RPS  ++I  +  E
Sbjct: 259 LMRMCWQYNPKMRPSFLEIISSIKEE 284

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 90/186 (48%), Gaps = 9/186 (4%)
Query: 374 RETNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ++T   +A+K+   S   K   K    E+K++ +LRH NLV LL  C +KK   LV+EF+
Sbjct: 47  KDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV 106
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
            +  LD      N  L ++   K    + +G+ +        ++HRDIK  NI++  +  
Sbjct: 107 DHTILDDLELFPNG-LDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGV 162
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACG 550
            K+ DFG AR +  A G        T  Y APE      K  K  DV++ G +  E+  G
Sbjct: 163 VKLCDFGFARTLA-APGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
Query: 551 RKPINP 556
            +P+ P
Sbjct: 222 -EPLFP 226

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 96/179 (53%), Gaps = 17/179 (9%)
Query: 377 NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           ++ +AVK +  GS   ++ + +E  ++  L+H  LV+L      K+ + ++ EFM  GSL
Sbjct: 206 HTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSL 263
Query: 437 DSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
              L   E S          +  +A G+ ++++   +  +HRD++++NI++ ++   KI 
Sbjct: 264 LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIA 320
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           DFGLAR+     G++  +      + APE    G  + +SDV+SFGI+ +EI   GR P
Sbjct: 321 DFGLARV-----GAKFPI-----KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 12/175 (6%)
Query: 383 KRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK 442
           K +++   QG  E   E+  +  LRH ++++L      K E+++V E+  N   D ++ +
Sbjct: 44  KVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQ 100
Query: 443 ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL 502
            + +   E R +  Q + S + Y        +VHRD+K  N++LD + N KI DFGL+ +
Sbjct: 101 RDKMSEQEAR-RFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNI 156
Query: 503 VEHAKGSQTTVLAGTMGYMAPECATTGK--ASKESDVYSFGIVALEIACGRKPIN 555
           +      +T+   G+  Y APE   +GK  A  E DV+S G++   + C R P +
Sbjct: 157 MTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 101/195 (51%), Gaps = 20/195 (10%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           +ET +  A K +   S++ +++Y  E++I++   H  +V+LLG  +   +L ++ EF P 
Sbjct: 33  KETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPG 92
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G++D+ + + +  LT      + + +   L +L     + ++HRD+K+ N+++    + +
Sbjct: 93  GAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIR 149
Query: 494 IGDFGLARLVEHAKGSQTT----VLAGTMGYMAPE---CATTGKASKE--SDVYSFGIVA 544
           + DFG++     AK  +T        GT  +MAPE   C T      +  +D++S GI  
Sbjct: 150 LADFGVS-----AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL 204
Query: 545 LEIACGRKP---INP 556
           +E+A    P   +NP
Sbjct: 205 IEMAQIEPPHHELNP 219

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 12/175 (6%)
Query: 383 KRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK 442
           K +++   QG  E   E+  +  LRH ++++L      K E+++V E+  N   D ++ +
Sbjct: 49  KVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQ 105
Query: 443 ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL 502
            + +   E R +  Q + S + Y        +VHRD+K  N++LD + N KI DFGL+ +
Sbjct: 106 RDKMSEQEAR-RFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNI 161
Query: 503 VEHAKGSQTTVLAGTMGYMAPECATTGK--ASKESDVYSFGIVALEIACGRKPIN 555
           +      +T+   G+  Y APE   +GK  A  E DV+S G++   + C R P +
Sbjct: 162 MTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 12/175 (6%)
Query: 383 KRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK 442
           K +++   QG  E   E+  +  LRH ++++L      K E+++V E+  N   D ++ +
Sbjct: 50  KVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQ 106
Query: 443 ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL 502
            + +   E R +  Q + S + Y        +VHRD+K  N++LD + N KI DFGL+ +
Sbjct: 107 RDKMSEQEAR-RFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNI 162
Query: 503 VEHAKGSQTTVLAGTMGYMAPECATTGK--ASKESDVYSFGIVALEIACGRKPIN 555
           +      +T+   G+  Y APE   +GK  A  E DV+S G++   + C R P +
Sbjct: 163 MTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 12/185 (6%)
Query: 376 TNSYIAVK---RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           T   +AVK   R    S   + +   E++ +   RH ++++L        +  +V E++ 
Sbjct: 35  TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L  ++ K   +   E R ++ Q + S + Y        VVHRD+K  N++LD++ NA
Sbjct: 95  GGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNA 150
Query: 493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK--ASKESDVYSFGIVALEIACG 550
           KI DFGL+ ++   +  + +   G+  Y APE   +G+  A  E D++S G++   + CG
Sbjct: 151 KIADFGLSNMMSDGEFLRDS--CGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCG 207
Query: 551 RKPIN 555
             P +
Sbjct: 208 TLPFD 212

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 20/195 (10%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           +ET+   A K +   S++ +++Y  E+ I++   H N+V+LL   + +  L ++ EF   
Sbjct: 59  KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G++D+ + +    LT      + +     L YL    +  ++HRD+K+ NI+   + + K
Sbjct: 119 GAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIK 175
Query: 494 IGDFGLARLVEHAKGSQTT----VLAGTMGYMAPE---CATTGKA--SKESDVYSFGIVA 544
           + DFG++     AK ++T        GT  +MAPE   C T+       ++DV+S GI  
Sbjct: 176 LADFGVS-----AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL 230
Query: 545 LEIACGRKP---INP 556
           +E+A    P   +NP
Sbjct: 231 IEMAEIEPPHHELNP 245

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 385 VSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE--LLLVYEFMPNGSLDSHLFK 442
           +++  KQ +    SEV ++  L+H N+V+      ++    L +V E+   G L S + K
Sbjct: 44  MTEAEKQML---VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK 100
Query: 443 ---ENSLLTWEFRYKIAQDLASGL--LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
              E   L  EF  ++   L   L   + + +    V+HRD+K +N+ LD   N K+GDF
Sbjct: 101 GTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160
Query: 498 GLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           GLAR++ H +        GT  YM+PE       +++SD++S G +  E+ C   P
Sbjct: 161 GLARILNHDEDFAKE-FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMP 214

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 22/227 (9%)
Query: 394 KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY 453
           ++ ++E+ I   L + ++V   G+  +   + +V E     SL     +  ++   E RY
Sbjct: 87  EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
            + Q +  G+ YL       V+HRD+K  N+ L+ + + KIGDFGLA  +E   G +   
Sbjct: 147 FMRQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKT 201
Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY 573
           L GT  Y+APE       S E D++S G +   +  G+ P        + S L+   + Y
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF-------ETSCLK---ETY 251
Query: 574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
              K  E   PR         I R++       H D  LRPS+ +++
Sbjct: 252 IRIKKNEYSVPRHINPVASALIRRML-------HADPTLRPSVAELL 291

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 101/195 (51%), Gaps = 20/195 (10%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           +ET +  A K +   S++ +++Y  E++I++   H  +V+LLG  +   +L ++ EF P 
Sbjct: 41  KETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPG 100
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G++D+ + + +  LT      + + +   L +L     + ++HRD+K+ N+++    + +
Sbjct: 101 GAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIR 157
Query: 494 IGDFGLARLVEHAKGSQTT----VLAGTMGYMAPE---CATTGKASKE--SDVYSFGIVA 544
           + DFG++     AK  +T        GT  +MAPE   C T      +  +D++S GI  
Sbjct: 158 LADFGVS-----AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL 212
Query: 545 LEIACGRKP---INP 556
           +E+A    P   +NP
Sbjct: 213 IEMAQIEPPHHELNP 227

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 20/182 (10%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK + +  S+Q   ++  E  IIS+L H+N+V+ +G   +     ++ E M  G L S
Sbjct: 78  VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
Query: 439 HLFK------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            L +      + S L       +A+D+A G  YL+E      +HRDI + N +L      
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 194
Query: 490 FNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
             AKIGDFG+AR +  A    KG    +    + +M PE    G  + ++D +SFG++  
Sbjct: 195 RVAKIGDFGMARDIYRASYYRKGGCAML---PVKWMPPEAFMEGIFTSKTDTWSFGVLLW 251
Query: 546 EI 547
           EI
Sbjct: 252 EI 253

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 20/182 (10%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK + +  S+Q   ++  E  IIS+L H+N+V+ +G   +     ++ E M  G L S
Sbjct: 64  VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 439 HLFK------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            L +      + S L       +A+D+A G  YL+E      +HRDI + N +L      
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 180
Query: 490 FNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
             AKIGDFG+AR +  A    KG    +    + +M PE    G  + ++D +SFG++  
Sbjct: 181 RVAKIGDFGMARDIYRASYYRKGGCAML---PVKWMPPEAFMEGIFTSKTDTWSFGVLLW 237
Query: 546 EI 547
           EI
Sbjct: 238 EI 239

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 85/185 (45%), Gaps = 9/185 (4%)
Query: 374 RETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           + T  Y A+K + +    +K  +    +E +++   RH  L  L         L  V E+
Sbjct: 32  KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 91
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
              G L  HL +E        R+  A+ + S L YL  E  + VV+RD+K  N+MLD + 
Sbjct: 92  ANGGELFFHLSRERVFSEDRARFYGAE-IVSALDYLHSE--KNVVYRDLKLENLMLDKDG 148
Query: 491 NAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
           + KI DFGL +  E  K G+      GT  Y+APE        +  D +  G+V  E+ C
Sbjct: 149 HIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 206
Query: 550 GRKPI 554
           GR P 
Sbjct: 207 GRLPF 211

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 12/185 (6%)
Query: 374 RETNSY--IAVKRV--SQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY 428
           RE  S+  +A+K +  SQ  K+G++ +   E++I + L H N+++L  + ++++ + L+ 
Sbjct: 43  REKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLIL 102
Query: 429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS 488
           E+ P G L   L +++     +    I ++LA  L+Y      + V+HRDIK  N++L  
Sbjct: 103 EYAPRGELYKEL-QKSCTFDEQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGL 158
Query: 489 NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
               KI DFG +    HA   +   + GT+ Y+ PE       +++ D++  G++  E+ 
Sbjct: 159 KGELKIADFGWS---VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELL 215
Query: 549 CGRKP 553
            G  P
Sbjct: 216 VGNPP 220

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 22/227 (9%)
Query: 394 KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY 453
           ++ ++E+ I   L + ++V   G+  +   + +V E     SL     +  ++   E RY
Sbjct: 87  EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
            + Q +  G+ YL       V+HRD+K  N+ L+ + + KIGDFGLA  +E   G +   
Sbjct: 147 FMRQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKX 201
Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY 573
           L GT  Y+APE       S E D++S G +   +  G+ P        + S L+   + Y
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF-------ETSCLK---ETY 251
Query: 574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
              K  E   PR         I R++       H D  LRPS+ +++
Sbjct: 252 IRIKKNEYSVPRHINPVASALIRRML-------HADPTLRPSVAELL 291

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 374 RETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           + T  Y A+K + +    +K  +    +E +++   RH  L  L         L  V E+
Sbjct: 173 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 232
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
              G L  HL +E        R+  A+ + S L YL  E  + VV+RD+K  N+MLD + 
Sbjct: 233 ANGGELFFHLSRERVFSEDRARFYGAE-IVSALDYLHSE--KNVVYRDLKLENLMLDKDG 289
Query: 491 NAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
           + KI DFGL +  E  K G+      GT  Y+APE        +  D +  G+V  E+ C
Sbjct: 290 HIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 347
Query: 550 GRKP 553
           GR P
Sbjct: 348 GRLP 351

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 85/185 (45%), Gaps = 9/185 (4%)
Query: 374 RETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           + T  Y A+K + +    +K  +    +E +++   RH  L  L         L  V E+
Sbjct: 30  KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 89
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
              G L  HL +E        R+  A+ + S L YL  E  + VV+RD+K  N+MLD + 
Sbjct: 90  ANGGELFFHLSRERVFSEDRARFYGAE-IVSALDYLHSE--KNVVYRDLKLENLMLDKDG 146
Query: 491 NAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
           + KI DFGL +  E  K G+      GT  Y+APE        +  D +  G+V  E+ C
Sbjct: 147 HIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 204
Query: 550 GRKPI 554
           GR P 
Sbjct: 205 GRLPF 209

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 374 RETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           + T  Y A+K + +    +K  +    +E +++   RH  L  L         L  V E+
Sbjct: 170 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 229
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
              G L  HL +E        R+  A+ + S L YL  E  + VV+RD+K  N+MLD + 
Sbjct: 230 ANGGELFFHLSRERVFSEDRARFYGAE-IVSALDYLHSE--KNVVYRDLKLENLMLDKDG 286
Query: 491 NAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
           + KI DFGL +  E  K G+      GT  Y+APE        +  D +  G+V  E+ C
Sbjct: 287 HIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 344
Query: 550 GRKP 553
           GR P
Sbjct: 345 GRLP 348

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 85/185 (45%), Gaps = 9/185 (4%)
Query: 374 RETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           + T  Y A+K + +    +K  +    +E +++   RH  L  L         L  V E+
Sbjct: 31  KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 90
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
              G L  HL +E        R+  A+ + S L YL  E  + VV+RD+K  N+MLD + 
Sbjct: 91  ANGGELFFHLSRERVFSEDRARFYGAE-IVSALDYLHSE--KNVVYRDLKLENLMLDKDG 147
Query: 491 NAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
           + KI DFGL +  E  K G+      GT  Y+APE        +  D +  G+V  E+ C
Sbjct: 148 HIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 205
Query: 550 GRKPI 554
           GR P 
Sbjct: 206 GRLPF 210

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 25/250 (10%)
Query: 380 IAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           +A+K+V        K  A    E+ ++ +L H N+++      E  EL +V E    G L
Sbjct: 60  VALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDL 119
Query: 437 D---SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                H  K+  L+     +K    L S L ++       V+HRDIK +N+ + +    K
Sbjct: 120 SRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVK 176
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           +GD GL R    +K +    L GT  YM+PE       + +SD++S G +  E+A  + P
Sbjct: 177 LGDLGLGRFFS-SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 235
Query: 554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVD-PRLCRDFDGQQIERLMIVGLWCAHPDENL 612
                            +LY   K +E  D P L  D   +++ +L+ +   C +PD   
Sbjct: 236 FYGDK-----------MNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNM---CINPDPEK 281
Query: 613 RPSIRQVIHV 622
           RP +  V  V
Sbjct: 282 RPDVTYVYDV 291

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 90/169 (53%), Gaps = 7/169 (4%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  I++ + H  +V+L      + +L L+ +F+  G L + L KE      + ++ +A+ 
Sbjct: 80  ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE- 138
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR-LVEHAKGSQTTVLAGT 517
           LA GL +L       +++RD+K  NI+LD   + K+ DFGL++  ++H K + +    GT
Sbjct: 139 LALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGT 193
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL 566
           + YMAPE       S  +D +S+G++  E+  G  P   K  +  ++L+
Sbjct: 194 VEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLI 242

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 82  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAE- 140
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   ASK SD+++ G +  ++  G  P
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 22/227 (9%)
Query: 394 KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY 453
           ++ ++E+ I   L + ++V   G+  +   + +V E     SL     +  ++   E RY
Sbjct: 87  EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
            + Q +  G+ YL       V+HRD+K  N+ L+ + + KIGDFGLA  +E   G +   
Sbjct: 147 FMRQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKD 201
Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY 573
           L GT  Y+APE       S E D++S G +   +  G+ P        + S L+   + Y
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF-------ETSCLK---ETY 251
Query: 574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
              K  E   PR         I R++       H D  LRPS+ +++
Sbjct: 252 IRIKKNEYSVPRHINPVASALIRRML-------HADPTLRPSVAELL 291

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 109/214 (50%), Gaps = 27/214 (12%)
Query: 375 ETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E    +A+K +   ++  ++E +  E  + +RL+H N+V LLG   + + L +++ +  +
Sbjct: 37  EQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH 96
Query: 434 GSLDSHLFK----------------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
           G L   L                  +++L   +F + +AQ +A+G+ YL       VVH+
Sbjct: 97  GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ-IAAGMEYLSS---HHVVHK 152
Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKE 534
           D+ + N+++    N KI D GL R V   ++ K    ++L   + +MAPE    GK S +
Sbjct: 153 DLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL--PIRWMAPEAIMYGKFSID 210
Query: 535 SDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQ 567
           SD++S+G+V  E+ + G +P    + Q  V +++
Sbjct: 211 SDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR 244

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 22/227 (9%)
Query: 394 KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY 453
           ++ ++E+ I   L + ++V   G+  +   + +V E     SL     +  ++   E RY
Sbjct: 71  EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY 130
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
            + Q +  G+ YL       V+HRD+K  N+ L+ + + KIGDFGLA  +E   G +   
Sbjct: 131 FMRQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKD 185
Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY 573
           L GT  Y+APE       S E D++S G +   +  G+ P        + S L+   + Y
Sbjct: 186 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF-------ETSCLK---ETY 235
Query: 574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
              K  E   PR         I R++       H D  LRPS+ +++
Sbjct: 236 IRIKKNEYSVPRHINPVASALIRRML-------HADPTLRPSVAELL 275

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 20/195 (10%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           +ET+   A K +   S++ +++Y  E+ I++   H N+V+LL   + +  L ++ EF   
Sbjct: 59  KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G++D+ + +    LT      + +     L YL    +  ++HRD+K+ NI+   + + K
Sbjct: 119 GAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIK 175
Query: 494 IGDFGLARLVEHAKGSQTT----VLAGTMGYMAPE---CATTGKA--SKESDVYSFGIVA 544
           + DFG++     AK ++         GT  +MAPE   C T+       ++DV+S GI  
Sbjct: 176 LADFGVS-----AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL 230
Query: 545 LEIACGRKP---INP 556
           +E+A    P   +NP
Sbjct: 231 IEMAEIEPPHHELNP 245

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK + +  S+Q   ++  E  IIS+  H+N+V+ +G   +     ++ E M  G L S
Sbjct: 63  VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKS 122
Query: 439 HLFK------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            L +      + S L       +A+D+A G  YL+E      +HRDI + N +L      
Sbjct: 123 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 179
Query: 490 FNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
             AKIGDFG+AR +  A    KG    +    + +M PE    G  + ++D +SFG++  
Sbjct: 180 RVAKIGDFGMARDIYRASYYRKGGCAML---PVKWMPPEAFMEGIFTSKTDTWSFGVLLW 236
Query: 546 EI 547
           EI
Sbjct: 237 EI 238

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK + +  S+Q   ++  E  IIS+  H+N+V+ +G   +     ++ E M  G L S
Sbjct: 55  VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 114
Query: 439 HLFK------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            L +      + S L       +A+D+A G  YL+E      +HRDI + N +L      
Sbjct: 115 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 171
Query: 490 FNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
             AKIGDFG+AR +  A    KG    +    + +M PE    G  + ++D +SFG++  
Sbjct: 172 RVAKIGDFGMARDIYRASYYRKGGCAML---PVKWMPPEAFMEGIFTSKTDTWSFGVLLW 228
Query: 546 EI 547
           EI
Sbjct: 229 EI 230

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK + +  S+Q   ++  E  IIS+  H+N+V+ +G   +     ++ E M  G L S
Sbjct: 63  VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 122
Query: 439 HLFK------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            L +      + S L       +A+D+A G  YL+E      +HRDI + N +L      
Sbjct: 123 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 179
Query: 490 FNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
             AKIGDFG+AR +  A    KG    +    + +M PE    G  + ++D +SFG++  
Sbjct: 180 RVAKIGDFGMARDIYRASYYRKGGCAML---PVKWMPPEAFMEGIFTSKTDTWSFGVLLW 236
Query: 546 EI 547
           EI
Sbjct: 237 EI 238

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK + +  S+Q   ++  E  IIS+  H+N+V+ +G   +     ++ E M  G L S
Sbjct: 64  VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 439 HLFK------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            L +      + S L       +A+D+A G  YL+E      +HRDI + N +L      
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 180
Query: 490 FNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
             AKIGDFG+AR +  A    KG    +    + +M PE    G  + ++D +SFG++  
Sbjct: 181 RVAKIGDFGMARDIYRASYYRKGGCAML---PVKWMPPEAFMEGIFTSKTDTWSFGVLLW 237
Query: 546 EI 547
           EI
Sbjct: 238 EI 239

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK + +  S+Q   ++  E  IIS+  H+N+V+ +G   +     ++ E M  G L S
Sbjct: 78  VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKS 137
Query: 439 HLFK------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            L +      + S L       +A+D+A G  YL+E      +HRDI + N +L      
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 194
Query: 490 FNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
             AKIGDFG+AR +  A    KG    +    + +M PE    G  + ++D +SFG++  
Sbjct: 195 RVAKIGDFGMARDIYRASYYRKGGCAML---PVKWMPPEAFMEGIFTSKTDTWSFGVLLW 251
Query: 546 EI 547
           EI
Sbjct: 252 EI 253

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 60  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 118
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 119 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 40/276 (14%)
Query: 379 YIAVKRVSQGSKQGIKEYASEVKIISRLRH-------------RNLVQLLGWCHEKKELL 425
           Y A+K++   +++ +    SEV +++ L H             RN V+ +    +K  L 
Sbjct: 33  YYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLF 91
Query: 426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
           +  E+  NG+L   +  EN     +  +++ + +   L Y+     Q ++HRD+K  NI 
Sbjct: 92  IQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIF 148
Query: 486 LDSNFNAKIGDFGLARLVEHA-------------KGSQTTVLAGTMGYMAPECAT-TGKA 531
           +D + N KIGDFGLA+ V  +                  T   GT  Y+A E    TG  
Sbjct: 149 IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
Query: 532 SKESDVYSFGIVALEI----ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC 587
           +++ D+YS GI+  E+    + G + +N       VS +++  D   N   +E    RL 
Sbjct: 209 NEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVS-IEFPPDFDDNKMKVEKKIIRLL 267
Query: 588 RDFDGQQI--ERLMIVGLW--CAHPDENLRPSIRQV 619
            D D  +    R ++   W    H DE ++ +++ +
Sbjct: 268 IDHDPNKRPGARTLLNSGWLPVKHQDEVIKEALKSL 303

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK + +  S+Q   ++  E  IIS+  H+N+V+ +G   +     ++ E M  G L S
Sbjct: 104 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 163
Query: 439 HLFK------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            L +      + S L       +A+D+A G  YL+E      +HRDI + N +L      
Sbjct: 164 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 220
Query: 490 FNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
             AKIGDFG+AR +  A    KG    +    + +M PE    G  + ++D +SFG++  
Sbjct: 221 RVAKIGDFGMARDIYRAGYYRKGGCAML---PVKWMPPEAFMEGIFTSKTDTWSFGVLLW 277
Query: 546 EI 547
           EI
Sbjct: 278 EI 279

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 109/214 (50%), Gaps = 27/214 (12%)
Query: 375 ETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E    +A+K +   ++  ++E +  E  + +RL+H N+V LLG   + + L +++ +  +
Sbjct: 54  EQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH 113
Query: 434 GSLDSHLFK----------------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
           G L   L                  +++L   +F + +AQ +A+G+ YL       VVH+
Sbjct: 114 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ-IAAGMEYLSS---HHVVHK 169
Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKE 534
           D+ + N+++    N KI D GL R V   ++ K    ++L   + +MAPE    GK S +
Sbjct: 170 DLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL--PIRWMAPEAIMYGKFSID 227
Query: 535 SDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQ 567
           SD++S+G+V  E+ + G +P    + Q  V +++
Sbjct: 228 SDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR 261

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK + +  S+Q   ++  E  IIS+  H+N+V+ +G   +     ++ E M  G L S
Sbjct: 70  VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 129
Query: 439 HLFK------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            L +      + S L       +A+D+A G  YL+E      +HRDI + N +L      
Sbjct: 130 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 186
Query: 490 FNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
             AKIGDFG+AR +  A    KG    +    + +M PE    G  + ++D +SFG++  
Sbjct: 187 RVAKIGDFGMARDIYRASYYRKGGCAML---PVKWMPPEAFMEGIFTSKTDTWSFGVLLW 243
Query: 546 EI 547
           EI
Sbjct: 244 EI 245

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 59  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 117
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 118 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 87  ERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 145
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 146 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK + +  S+Q   ++  E  IIS+  H+N+V+ +G   +     ++ E M  G L S
Sbjct: 81  VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 140
Query: 439 HLFK------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            L +      + S L       +A+D+A G  YL+E      +HRDI + N +L      
Sbjct: 141 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 197
Query: 490 FNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
             AKIGDFG+AR +  A    KG    +    + +M PE    G  + ++D +SFG++  
Sbjct: 198 RVAKIGDFGMARDIYRAGYYRKGGCAML---PVKWMPPEAFMEGIFTSKTDTWSFGVLLW 254
Query: 546 EI 547
           EI
Sbjct: 255 EI 256

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 20/195 (10%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           +ET+   A K +   S++ +++Y  E+ I++   H N+V+LL   + +  L ++ EF   
Sbjct: 59  KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G++D+ + +    LT      + +     L YL    +  ++HRD+K+ NI+   + + K
Sbjct: 119 GAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIK 175
Query: 494 IGDFGLARLVEHAKGSQTT----VLAGTMGYMAPE---CATTGKA--SKESDVYSFGIVA 544
           + DFG++     AK ++         GT  +MAPE   C T+       ++DV+S GI  
Sbjct: 176 LADFGVS-----AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL 230
Query: 545 LEIACGRKP---INP 556
           +E+A    P   +NP
Sbjct: 231 IEMAEIEPPHHELNP 245

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK + +  S+Q   ++  E  IIS+  H+N+V+ +G   +     ++ E M  G L S
Sbjct: 80  VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 139
Query: 439 HLFK------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            L +      + S L       +A+D+A G  YL+E      +HRDI + N +L      
Sbjct: 140 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 196
Query: 490 FNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
             AKIGDFG+AR +  A    KG    +    + +M PE    G  + ++D +SFG++  
Sbjct: 197 RVAKIGDFGMARDIYRASYYRKGGCAML---PVKWMPPEAFMEGIFTSKTDTWSFGVLLW 253
Query: 546 EI 547
           EI
Sbjct: 254 EI 255

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 80  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 138
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 139 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 58  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 116
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 117 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 10/184 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           + T   +A+K +++ + +G +    +E+ ++ +++H N+V L         L L+ + + 
Sbjct: 40  KRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS 99
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM---LDSN 489
            G L   +  E    T     ++   +   + YL +     +VHRD+K  N++   LD +
Sbjct: 100 GGELFDRIV-EKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDED 155
Query: 490 FNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
               I DFGL+++ +   GS  +   GT GY+APE       SK  D +S G++A  + C
Sbjct: 156 SKIMISDFGLSKMED--PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 550 GRKP 553
           G  P
Sbjct: 214 GYPP 217

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 57  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 115
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 116 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK + +  S+Q   ++  E  IIS+  H+N+V+ +G   +     ++ E M  G L S
Sbjct: 78  VAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
Query: 439 HLFK------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            L +      + S L       +A+D+A G  YL+E      +HRDI + N +L      
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 194
Query: 490 FNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
             AKIGDFG+AR +  A    KG    +    + +M PE    G  + ++D +SFG++  
Sbjct: 195 RVAKIGDFGMARDIYRASYYRKGGCAML---PVKWMPPEAFMEGIFTSKTDTWSFGVLLW 251
Query: 546 EI 547
           EI
Sbjct: 252 EI 253

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 82  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 140
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 80  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 138
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 139 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 83  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 141
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 142 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 80  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 138
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 139 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 80  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 138
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 139 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 85  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 143
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 144 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 82  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 140
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 82  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 140
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 10/184 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           + T   +A+K +++ + +G +    +E+ ++ +++H N+V L         L L+ + + 
Sbjct: 40  KRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS 99
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM---LDSN 489
            G L   +  E    T     ++   +   + YL +     +VHRD+K  N++   LD +
Sbjct: 100 GGELFDRIV-EKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDED 155
Query: 490 FNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
               I DFGL+++ +   GS  +   GT GY+APE       SK  D +S G++A  + C
Sbjct: 156 SKIMISDFGLSKMED--PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 550 GRKP 553
           G  P
Sbjct: 214 GYPP 217

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 115/257 (44%), Gaps = 16/257 (6%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           + T   +AVK++    +Q  +   +EV I+    H N+V +        EL +V EF+  
Sbjct: 67  KHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEG 126
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G+L       ++ +  E    +   +   L YL     Q V+HRDIKS +I+L S+   K
Sbjct: 127 GALTD--IVTHTRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIK 181
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           + DFG    V   +  +   L GT  +MAPE  +      E D++S GI+ +E+  G  P
Sbjct: 182 LSDFGFCAQVS-KEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
Query: 554 INPKAPQGQV-----SLLQWVWDLYGNGKLLEA-VDPRLCRDFDGQQIERLMIVG---LW 604
              + P   +     SL   V DL+    +L   +D  L R+   Q+     ++G   L 
Sbjct: 241 YFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVRE-PSQRATAQELLGHPFLK 299
Query: 605 CAHPDENLRPSIRQVIH 621
            A P   + P +RQ  H
Sbjct: 300 LAGPPSCIVPLMRQYRH 316

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 82  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 140
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK + +  S+Q   ++  E  IIS+  H+N+V+ +G   +     ++ E M  G L S
Sbjct: 90  VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 149
Query: 439 HLFK------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            L +      + S L       +A+D+A G  YL+E      +HRDI + N +L      
Sbjct: 150 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 206
Query: 490 FNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
             AKIGDFG+AR +  A    KG    +    + +M PE    G  + ++D +SFG++  
Sbjct: 207 RVAKIGDFGMARDIYRASYYRKGGCAML---PVKWMPPEAFMEGIFTSKTDTWSFGVLLW 263
Query: 546 EI 547
           EI
Sbjct: 264 EI 265

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 82  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 140
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 64  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 122
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 123 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
Query: 394 KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL-----DSHLFKENSLLT 448
           +E  +E+ ++  L H N+++L     +KK   LV EF   G L     + H F E     
Sbjct: 91  EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 449 WEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN---FNAKIGDFGLARLVEH 505
                 I + + SG+ YL    +  +VHRDIK  NI+L++     N KI DFGL+     
Sbjct: 151 ------IMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF-- 199
Query: 506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQ 560
           +K  +     GT  Y+APE     K +++ DV+S G++   + CG  P   +  Q
Sbjct: 200 SKDYKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ 253

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 79  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 137
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 138 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 10/184 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           + T   +A+K +++ + +G +    +E+ ++ +++H N+V L         L L+ + + 
Sbjct: 40  KRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS 99
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM---LDSN 489
            G L   +  E    T     ++   +   + YL +     +VHRD+K  N++   LD +
Sbjct: 100 GGELFDRIV-EKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDED 155
Query: 490 FNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
               I DFGL+++ +   GS  +   GT GY+APE       SK  D +S G++A  + C
Sbjct: 156 SKIMISDFGLSKMED--PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 550 GRKP 553
           G  P
Sbjct: 214 GYPP 217

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +    +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 70  VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 438 SHLFKENSLLTWEFRYKIAQ----------------DLASGLLYLQEEWEQCVVHRDIKS 481
            +L +       E+ Y I +                 LA G+ YL     Q  +HRD+ +
Sbjct: 130 EYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAA 185
Query: 482 SNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG-TMGYMAPECATTGKASKESDVYSF 540
            N+++  N   KI DFGLAR + +    + T      + +MAPE       + +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 541 GIVALEI 547
           G++  EI
Sbjct: 246 GVLMWEI 252

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 83  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 141
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 142 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 33/208 (15%)
Query: 380 IAVKRVS-QGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL-- 436
           +A+KR++ +  +  + E   E++ +S+  H N+V        K EL LV + +  GS+  
Sbjct: 43  VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 437 -----------DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
                       S +  E+++ T      I +++  GL YL +  +   +HRD+K+ NI+
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIAT------ILREVLEGLEYLHKNGQ---IHRDVKAGNIL 153
Query: 486 LDSNFNAKIGDFGLARLVEHAKGSQTT------VLAGTMGYMAPECATTGKASK-ESDVY 538
           L  + + +I DFG++  +  A G   T         GT  +MAPE     +    ++D++
Sbjct: 154 LGEDGSVQIADFGVSAFL--ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIW 211
Query: 539 SFGIVALEIACGRKPINPKAPQGQVSLL 566
           SFGI A+E+A G  P + K P  +V +L
Sbjct: 212 SFGITAIELATGAAPYH-KYPPMKVLML 238

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 33/208 (15%)
Query: 380 IAVKRVS-QGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL-- 436
           +A+KR++ +  +  + E   E++ +S+  H N+V        K EL LV + +  GS+  
Sbjct: 38  VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 437 -----------DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
                       S +  E+++ T      I +++  GL YL +  +   +HRD+K+ NI+
Sbjct: 98  IIKHIVAKGEHKSGVLDESTIAT------ILREVLEGLEYLHKNGQ---IHRDVKAGNIL 148
Query: 486 LDSNFNAKIGDFGLARLVEHAKGSQTT------VLAGTMGYMAPECATTGKASK-ESDVY 538
           L  + + +I DFG++  +  A G   T         GT  +MAPE     +    ++D++
Sbjct: 149 LGEDGSVQIADFGVSAFL--ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIW 206
Query: 539 SFGIVALEIACGRKPINPKAPQGQVSLL 566
           SFGI A+E+A G  P + K P  +V +L
Sbjct: 207 SFGITAIELATGAAPYH-KYPPMKVLML 233

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 10/184 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           + T   +A+K +++ + +G +    +E+ ++ +++H N+V L         L L+ + + 
Sbjct: 40  KRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS 99
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM---LDSN 489
            G L   +  E    T     ++   +   + YL +     +VHRD+K  N++   LD +
Sbjct: 100 GGELFDRIV-EKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDED 155
Query: 490 FNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
               I DFGL+++ +   GS  +   GT GY+APE       SK  D +S G++A  + C
Sbjct: 156 SKIMISDFGLSKMED--PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 550 GRKP 553
           G  P
Sbjct: 214 GYPP 217

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  ++SRL H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ 
Sbjct: 79  ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE- 137
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-HAKGSQTTVLAGT 517
           + S L YL     + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT
Sbjct: 138 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             Y++PE  T   A K SD+++ G +  ++  G  P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 14/189 (7%)
Query: 374 RETNSYIAVKRVS-QGSKQGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           RET+  +A+KRV      +G+   A  E+ ++  L+H+N+V+L    H  K+L LV+EF 
Sbjct: 24  RETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
            +  L  +    N  L  E        L  GL +      + V+HRD+K  N++++ N  
Sbjct: 84  -DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGE 139
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECATTGKA-SKESDVYSFGIVALEI 547
            K+ DFGLAR    A G      +    T+ Y  P+     K  S   D++S G +  E+
Sbjct: 140 LKLADFGLAR----AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
Query: 548 ACGRKPINP 556
           A   +P+ P
Sbjct: 196 ANAARPLFP 204

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +    +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 438 SHLFKENSLLTWEFRYKIAQ----------------DLASGLLYLQEEWEQCVVHRDIKS 481
            +L +       E+ Y I +                 LA G+ YL     Q  +HRD+ +
Sbjct: 176 EYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAA 231
Query: 482 SNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
            N+++  N   KI DFGLAR + +     +TT     + +MAPE       + +SDV+SF
Sbjct: 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 291
Query: 541 GIVALEI 547
           G++  EI
Sbjct: 292 GVLMWEI 298

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +    +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 70  VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 438 SHLFKENSLLTWEFRYKIAQ----------------DLASGLLYLQEEWEQCVVHRDIKS 481
            +L +       E+ Y I +                 LA G+ YL     Q  +HRD+ +
Sbjct: 130 EYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAA 185
Query: 482 SNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
            N+++  N   KI DFGLAR + +     +TT     + +MAPE       + +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 541 GIVALEI 547
           G++  EI
Sbjct: 246 GVLMWEI 252

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +    +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 70  VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 438 SHLFKENSLLTWEFRYKIAQ----------------DLASGLLYLQEEWEQCVVHRDIKS 481
            +L +       E+ Y I +                 LA G+ YL     Q  +HRD+ +
Sbjct: 130 EYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAA 185
Query: 482 SNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
            N+++  N   KI DFGLAR + +     +TT     + +MAPE       + +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 541 GIVALEI 547
           G++  EI
Sbjct: 246 GVLMWEI 252

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 38/264 (14%)
Query: 380 IAVKRV-SQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK + S  +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 438 SHL---------------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS 482
            +L                     L+ +     A  +A G+ YL  +  +C+ HRD+ + 
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--KCI-HRDLAAR 220
Query: 483 NIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFG 541
           N+++  +   KI DFGLAR + H     +TT     + +MAPE       + +SDV+SFG
Sbjct: 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 280
Query: 542 IVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           ++  EI   G  P  P  P      ++ ++ L   G  ++   P  C +        +M+
Sbjct: 281 VLLWEIFTLGGSPY-PGVP------VEELFKLLKEGHRMDK--PSNCTNE-----LYMMM 326
Query: 601 VGLWCAHPDENLRPSIRQVIHVLN 624
              W A P +  RP+ +Q++  L+
Sbjct: 327 RDCWHAVPSQ--RPTFKQLVEDLD 348

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA--SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           + T    AVK + + + +G KE +  +E+ ++ +++H N+V L         L LV + +
Sbjct: 44  KATGKLFAVKCIPKKALKG-KESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLV 102
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML---DS 488
             G L   +  E    T +    + + +   + YL       +VHRD+K  N++    D 
Sbjct: 103 SGGELFDRIV-EKGFYTEKDASTLIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDE 158
Query: 489 NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
                I DFGL+++    KG   +   GT GY+APE       SK  D +S G++A  + 
Sbjct: 159 ESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 216
Query: 549 CGRKP 553
           CG  P
Sbjct: 217 CGYPP 221

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +    +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 57  VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 438 SHLFKENSLLTWEFRYKIAQ----------------DLASGLLYLQEEWEQCVVHRDIKS 481
            +L +       E+ Y I +                 LA G+ YL     Q  +HRD+ +
Sbjct: 117 EYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLTA 172
Query: 482 SNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
            N+++  N   KI DFGLAR + +     +TT     + +MAPE       + +SDV+SF
Sbjct: 173 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 232
Query: 541 GIVALEI 547
           G++  EI
Sbjct: 233 GVLMWEI 239

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +    +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 70  VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 438 SHL-----------FKENSLLTWEFRYK----IAQDLASGLLYLQEEWEQCVVHRDIKSS 482
            +L           +  N +   +  +K        LA G+ YL     Q  +HRD+ + 
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAAR 186
Query: 483 NIMLDSNFNAKIGDFGLARLVEHA-KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFG 541
           N+++  N   KI DFGLAR + +     +TT     + +MAPE       + +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 542 IVALEI 547
           ++  EI
Sbjct: 247 VLMWEI 252

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +    +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 62  VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 438 SHLFKENSLLTWEFRYKIAQ----------------DLASGLLYLQEEWEQCVVHRDIKS 481
            +L +       E+ Y I +                 LA G+ YL     Q  +HRD+ +
Sbjct: 122 EYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAA 177
Query: 482 SNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
            N+++  N   KI DFGLAR + +     +TT     + +MAPE       + +SDV+SF
Sbjct: 178 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 237
Query: 541 GIVALEI 547
           G++  EI
Sbjct: 238 GVLMWEI 244

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 23/184 (12%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSL- 436
           +AVK +   +    KE   SE+KI+S L +H N+V LLG C     +L++ E+   G L 
Sbjct: 71  VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 437 -------DSHLFKENSLLTWEFR--YKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD 487
                  ++ L KE+     E R     +  +A G+ +L  +   C+ HRD+ + N++L 
Sbjct: 131 NFLRRKAEADLDKEDGR-PLELRDLLHFSSQVAQGMAFLASK--NCI-HRDVAARNVLLT 186
Query: 488 SNFNAKIGDFGLARLVEHAKGSQTTVLAGT----MGYMAPECATTGKASKESDVYSFGIV 543
           +   AKIGDFGLAR + +       ++ G     + +MAPE       + +SDV+S+GI+
Sbjct: 187 NGHVAKIGDFGLARDIMN---DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 243
Query: 544 ALEI 547
             EI
Sbjct: 244 LWEI 247

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 128/264 (48%), Gaps = 38/264 (14%)
Query: 380 IAVKRV-SQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK + S  +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 63  VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 438 SHL-FKENSLLTWEFR--------------YKIAQDLASGLLYLQEEWEQCVVHRDIKSS 482
            +L  +E   L + +                  A  +A G+ YL  +  +C+ HRD+ + 
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--KCI-HRDLAAR 179
Query: 483 NIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFG 541
           N+++  +   KI DFGLAR + H     +TT     + +MAPE       + +SDV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 542 IVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           ++  EI   G  P  P  P      ++ ++ L   G  ++   P  C +        +M+
Sbjct: 240 VLLWEIFTLGGSPY-PGVP------VEELFKLLKEGHRMDK--PSNCTNE-----LYMMM 285
Query: 601 VGLWCAHPDENLRPSIRQVIHVLN 624
              W A P +  RP+ +Q++  L+
Sbjct: 286 RDCWHAVPSQ--RPTFKQLVEDLD 307

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 398 SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQ 457
           +E+ ++ RL H N+++L        E+ LV E +  G L   + ++      +    + Q
Sbjct: 97  TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ 156
Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVL 514
            L   + YL E     +VHRD+K  N++  +   +   KI DFGL+++VEH    +T  +
Sbjct: 157 IL-EAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--V 210
Query: 515 AGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
            GT GY APE         E D++S GI+   + CG +P
Sbjct: 211 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 21/183 (11%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSL- 436
           +AVK +   +    KE   SE+KI+S L +H N+V LLG C     +L++ E+   G L 
Sbjct: 79  VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 437 -------DSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS 488
                  ++ L KE+   L        +  +A G+ +L  +   C+ HRD+ + N++L +
Sbjct: 139 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK--NCI-HRDVAARNVLLTN 195
Query: 489 NFNAKIGDFGLARLVEHAKGSQTTVLAGT----MGYMAPECATTGKASKESDVYSFGIVA 544
              AKIGDFGLAR + +       ++ G     + +MAPE       + +SDV+S+GI+ 
Sbjct: 196 GHVAKIGDFGLARDIMN---DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 252
Query: 545 LEI 547
            EI
Sbjct: 253 WEI 255

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 124/265 (46%), Gaps = 40/265 (15%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +    +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 70  VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 438 SHLFKENSLLTWEFRYKIAQ----------------DLASGLLYLQEEWEQCVVHRDIKS 481
            +L +       E+ Y I +                 LA G+ YL     Q  +HRD+ +
Sbjct: 130 EYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAA 185
Query: 482 SNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT-MGYMAPECATTGKASKESDVYSF 540
            N+++  N   KI DFGLAR + +    + T      + +MAPE       + +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 541 GIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLM 599
           G++  EI   G  P  P  P      ++ ++ L   G  ++   P  C +        +M
Sbjct: 246 GVLMWEIFTLGGSPY-PGIP------VEELFKLLKEGHRMDK--PANCTNE-----LYMM 291
Query: 600 IVGLWCAHPDENLRPSIRQVIHVLN 624
           +   W A P +  RP+ +Q++  L+
Sbjct: 292 MRDCWHAVPSQ--RPTFKQLVEDLD 314

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +    +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 59  VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 438 SHLFKENSLLTWEFRYKIAQ----------------DLASGLLYLQEEWEQCVVHRDIKS 481
            +L +       E+ Y I +                 LA G+ YL     Q  +HRD+ +
Sbjct: 119 EYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAA 174
Query: 482 SNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
            N+++  N   KI DFGLAR + +     +TT     + +MAPE       + +SDV+SF
Sbjct: 175 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 234
Query: 541 GIVALEI 547
           G++  EI
Sbjct: 235 GVLMWEI 241

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 6/180 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           R +   +AVK++    +Q  +   +EV I+   +H N+V++        EL +V EF+  
Sbjct: 51  RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 110
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G+L       ++ +  E   +IA    + L  L     Q V+HRDIKS +I+L  +   K
Sbjct: 111 GALTD--IVTHTRMNEE---QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 165
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           + DFG    V   +  +   L GT  +MAPE  +      E D++S GI+ +E+  G  P
Sbjct: 166 LSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK + +  S+Q   ++  E  IIS+  H+N+V+ +G   +     ++ E M  G L S
Sbjct: 64  VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 439 HLFK------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            L +      + S L       +A+D+A G  YL+E      +HRDI + N +L      
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 180
Query: 490 FNAKIGDFGLARLVEHA----KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
             AKIGDFG+A+ +  A    KG    +    + +M PE    G  + ++D +SFG++  
Sbjct: 181 RVAKIGDFGMAQDIYRASYYRKGGCAML---PVKWMPPEAFMEGIFTSKTDTWSFGVLLW 237
Query: 546 EI 547
           EI
Sbjct: 238 EI 239

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 6/180 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           R +   +AVK++    +Q  +   +EV I+   +H N+V++        EL +V EF+  
Sbjct: 42  RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G+L       ++ +  E   +IA    + L  L     Q V+HRDIKS +I+L  +   K
Sbjct: 102 GALTD--IVTHTRMNEE---QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 156
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           + DFG    V   +  +   L GT  +MAPE  +      E D++S GI+ +E+  G  P
Sbjct: 157 LSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 125/264 (47%), Gaps = 38/264 (14%)
Query: 380 IAVKRV-SQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK + S  +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 63  VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 438 SHL---------------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS 482
            +L                     L+ +     A  +A G+ YL  +  +C+ HRD+ + 
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--KCI-HRDLAAR 179
Query: 483 NIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG-TMGYMAPECATTGKASKESDVYSFG 541
           N+++  +   KI DFGLAR + H    + T      + +MAPE       + +SDV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 542 IVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           ++  EI   G  P  P  P      ++ ++ L   G  ++   P  C +        +M+
Sbjct: 240 VLLWEIFTLGGSPY-PGVP------VEELFKLLKEGHRMDK--PSNCTNE-----LYMMM 285
Query: 601 VGLWCAHPDENLRPSIRQVIHVLN 624
              W A P +  RP+ +Q++  L+
Sbjct: 286 RDCWHAVPSQ--RPTFKQLVEDLD 307

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 6/180 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           R +   +AVK++    +Q  +   +EV I+   +H N+V++        EL +V EF+  
Sbjct: 53  RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 112
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G+L       ++ +  E   +IA    + L  L     Q V+HRDIKS +I+L  +   K
Sbjct: 113 GALTD--IVTHTRMNEE---QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 167
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           + DFG    V   +  +   L GT  +MAPE  +      E D++S GI+ +E+  G  P
Sbjct: 168 LSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 11/134 (8%)
Query: 374 RETNSYIAVKRVSQG----SKQGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVY 428
           + TN  +A+K++  G    +K GI   A  E+K++  L H N++ LL     K  + LV+
Sbjct: 32  KNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVF 91
Query: 429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLA-SGLLYLQEEWEQCVVHRDIKSSNIMLD 487
           +FM        + K+NSL+      K    +   GL YL + W   ++HRD+K +N++LD
Sbjct: 92  DFMETDL--EVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLD 146
Query: 488 SNFNAKIGDFGLAR 501
            N   K+ DFGLA+
Sbjct: 147 ENGVLKLADFGLAK 160

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +    +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 70  VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 438 SHLFKENSLLTWEFRYKIAQ----------------DLASGLLYLQEEWEQCVVHRDIKS 481
            +L +       E+ Y I +                 LA G+ YL     Q  +HRD+ +
Sbjct: 130 EYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAA 185
Query: 482 SNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
            N+++  N   KI DFGLAR + +     +TT     + +MAPE       + +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 541 GIVALEI 547
           G++  EI
Sbjct: 246 GVLMWEI 252

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 14/165 (8%)
Query: 395 EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK 454
           E  +E  ++ +L +  +V+++G C E +  +LV E    G L+ +L ++N  +  +   +
Sbjct: 74  ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 131
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           +   ++ G+ YL+E      VHRD+ + N++L +   AKI DFGL++ +   +  +    
Sbjct: 132 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYK 185
Query: 515 AGTMG-----YMAPECATTGKASKESDVYSFGIVALE-IACGRKP 553
           A T G     + APEC    K S +SDV+SFG++  E  + G+KP
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 14/165 (8%)
Query: 395 EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK 454
           E  +E  ++ +L +  +V+++G C E +  +LV E    G L+ +L ++N  +  +   +
Sbjct: 74  ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 131
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           +   ++ G+ YL+E      VHRD+ + N++L +   AKI DFGL++ +   +  +    
Sbjct: 132 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYK 185
Query: 515 AGTMG-----YMAPECATTGKASKESDVYSFGIVALE-IACGRKP 553
           A T G     + APEC    K S +SDV+SFG++  E  + G+KP
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 6/180 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           R +   +AVK++    +Q  +   +EV I+   +H N+V++        EL +V EF+  
Sbjct: 96  RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 155
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G+L       ++ +  E   +IA    + L  L     Q V+HRDIKS +I+L  +   K
Sbjct: 156 GALTD--IVTHTRMNEE---QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 210
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           + DFG    V   +  +   L GT  +MAPE  +      E D++S GI+ +E+  G  P
Sbjct: 211 LSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 385 VSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL-------D 437
           +S+ S +  +E   EV +++ ++H N+VQ      E   L +V ++   G L        
Sbjct: 59  ISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQK 118
Query: 438 SHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF 497
             LF+E+ +L W  +  +A         L+   ++ ++HRDIKS NI L  +   ++GDF
Sbjct: 119 GVLFQEDQILDWFVQICLA---------LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDF 169
Query: 498 GLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
           G+AR++ ++         GT  Y++PE       + +SD+++ G V  E+ 
Sbjct: 170 GIARVL-NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELC 219

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 6/180 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           R +   +AVK++    +Q  +   +EV I+   +H N+V++        EL +V EF+  
Sbjct: 46  RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 105
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G+L       ++ +  E   +IA    + L  L     Q V+HRDIKS +I+L  +   K
Sbjct: 106 GALTD--IVTHTRMNEE---QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 160
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           + DFG    V   +  +   L GT  +MAPE  +      E D++S GI+ +E+  G  P
Sbjct: 161 LSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 14/165 (8%)
Query: 395 EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK 454
           E  +E  ++ +L +  +V+++G C E +  +LV E    G L+ +L ++N  +  +   +
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 473
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           +   ++ G+ YL+E      VHRD+ + N++L +   AKI DFGL++ +   +  +    
Sbjct: 474 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYK 527
Query: 515 AGTMG-----YMAPECATTGKASKESDVYSFGIVALE-IACGRKP 553
           A T G     + APEC    K S +SDV+SFG++  E  + G+KP
Sbjct: 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 14/165 (8%)
Query: 395 EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK 454
           E  +E  ++ +L +  +V+++G C E +  +LV E    G L+ +L ++N  +  +   +
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 474
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           +   ++ G+ YL+E      VHRD+ + N++L +   AKI DFGL++ +   +  +    
Sbjct: 475 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYK 528
Query: 515 AGTMG-----YMAPECATTGKASKESDVYSFGIVALE-IACGRKP 553
           A T G     + APEC    K S +SDV+SFG++  E  + G+KP
Sbjct: 529 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 7/169 (4%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  I+  + H  +V+L      + +L L+ +F+  G L + L KE      + ++ +A+ 
Sbjct: 76  ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE- 134
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR-LVEHAKGSQTTVLAGT 517
           LA  L +L       +++RD+K  NI+LD   + K+ DFGL++  ++H K + +    GT
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGT 189
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL 566
           + YMAPE       ++ +D +SFG++  E+  G  P   K  +  ++++
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 14/165 (8%)
Query: 395 EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK 454
           E  +E  ++ +L +  +V+++G C E +  +LV E    G L+ +L ++N  +  +   +
Sbjct: 72  ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 129
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           +   ++ G+ YL+E      VHRD+ + N++L +   AKI DFGL++ +   +  +    
Sbjct: 130 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYK 183
Query: 515 AGTMG-----YMAPECATTGKASKESDVYSFGIVALE-IACGRKP 553
           A T G     + APEC    K S +SDV+SFG++  E  + G+KP
Sbjct: 184 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 14/165 (8%)
Query: 395 EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK 454
           E  +E  ++ +L +  +V+++G C E +  +LV E    G L+ +L ++N  +  +   +
Sbjct: 58  ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 115
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           +   ++ G+ YL+E      VHRD+ + N++L +   AKI DFGL++ +   +  +    
Sbjct: 116 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENXYK 169
Query: 515 AGTMG-----YMAPECATTGKASKESDVYSFGIVALE-IACGRKP 553
           A T G     + APEC    K S +SDV+SFG++  E  + G+KP
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 6/180 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           R +   +AVK++    +Q  +   +EV I+   +H N+V++        EL +V EF+  
Sbjct: 173 RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 232
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G+L       ++ +  E   +IA    + L  L     Q V+HRDIKS +I+L  +   K
Sbjct: 233 GALTD--IVTHTRMNEE---QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 287
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           + DFG    V   +  +   L GT  +MAPE  +      E D++S GI+ +E+  G  P
Sbjct: 288 LSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 32/200 (16%)
Query: 375 ETNSYIAVKRVSQGSKQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           E  + +AVK + + +   ++ ++  E  +++   + N+V+LLG C   K + L++E+M  
Sbjct: 75  EPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAY 134
Query: 434 GSLDSHL----------FKENSL-------------LTWEFRYKIAQDLASGLLYLQEEW 470
           G L+  L             + L             L+   +  IA+ +A+G+ YL E  
Sbjct: 135 GDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE-- 192
Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV---EHAKGSQTTVLAGTMGYMAPECAT 527
            +  VHRD+ + N ++  N   KI DFGL+R +   ++ K      +   + +M PE   
Sbjct: 193 -RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAI--PIRWMPPESIF 249
Query: 528 TGKASKESDVYSFGIVALEI 547
             + + ESDV+++G+V  EI
Sbjct: 250 YNRYTTESDVWAYGVVLWEI 269

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 14/165 (8%)
Query: 395 EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK 454
           E  +E  ++ +L +  +V+++G C E +  +LV E    G L+ +L ++N  +  +   +
Sbjct: 54  ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 111
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           +   ++ G+ YL+E      VHRD+ + N++L +   AKI DFGL++ +   +  +    
Sbjct: 112 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYK 165
Query: 515 AGTMG-----YMAPECATTGKASKESDVYSFGIVALE-IACGRKP 553
           A T G     + APEC    K S +SDV+SFG++  E  + G+KP
Sbjct: 166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 14/165 (8%)
Query: 395 EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK 454
           E  +E  ++ +L +  +V+++G C E +  +LV E    G L+ +L ++N  +  +   +
Sbjct: 58  ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 115
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           +   ++ G+ YL+E      VHRD+ + N++L +   AKI DFGL++ +   +  +    
Sbjct: 116 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYK 169
Query: 515 AGTMG-----YMAPECATTGKASKESDVYSFGIVALE-IACGRKP 553
           A T G     + APEC    K S +SDV+SFG++  E  + G+KP
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 38/264 (14%)
Query: 380 IAVKRV-SQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK + S  +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 55  VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 438 SHL---------------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS 482
            +L                     L+ +     A  +A G+ YL  +  +C+ HRD+ + 
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--KCI-HRDLAAR 171
Query: 483 NIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFG 541
           N+++  +   KI DFGLAR + H     +TT     + +MAPE       + +SDV+SFG
Sbjct: 172 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 231
Query: 542 IVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           ++  EI   G  P  P  P      ++ ++ L   G  ++   P  C +        +M+
Sbjct: 232 VLLWEIFTLGGSPY-PGVP------VEELFKLLKEGHRMDK--PSNCTNE-----LYMMM 277
Query: 601 VGLWCAHPDENLRPSIRQVIHVLN 624
              W A P +  RP+ +Q++  L+
Sbjct: 278 RDCWHAVPSQ--RPTFKQLVEDLD 299

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +    +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 70  VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 438 SHLFKENSLLTWEFRYKIAQ----------------DLASGLLYLQEEWEQCVVHRDIKS 481
            +L +       E+ Y I +                 LA G+ YL     Q  +HRD+ +
Sbjct: 130 EYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAA 185
Query: 482 SNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
            N+++  N   +I DFGLAR + +     +TT     + +MAPE       + +SDV+SF
Sbjct: 186 RNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 541 GIVALEI 547
           G++  EI
Sbjct: 246 GVLMWEI 252

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 14/165 (8%)
Query: 395 EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK 454
           E  +E  ++ +L +  +V+++G C E +  +LV E    G L+ +L ++N  +  +   +
Sbjct: 64  ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 121
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           +   ++ G+ YL+E      VHRD+ + N++L +   AKI DFGL++ +   +  +    
Sbjct: 122 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYK 175
Query: 515 AGTMG-----YMAPECATTGKASKESDVYSFGIVALE-IACGRKP 553
           A T G     + APEC    K S +SDV+SFG++  E  + G+KP
Sbjct: 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 38/264 (14%)
Query: 380 IAVKRV-SQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK + S  +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 52  VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 438 SHL---------------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS 482
            +L                     L+ +     A  +A G+ YL  +  +C+ HRD+ + 
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--KCI-HRDLAAR 168
Query: 483 NIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFG 541
           N+++  +   KI DFGLAR + H     +TT     + +MAPE       + +SDV+SFG
Sbjct: 169 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 228
Query: 542 IVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           ++  EI   G  P  P  P      ++ ++ L   G  ++   P  C +        +M+
Sbjct: 229 VLLWEIFTLGGSPY-PGVP------VEELFKLLKEGHRMDK--PSNCTNE-----LYMMM 274
Query: 601 VGLWCAHPDENLRPSIRQVIHVLN 624
              W A P +  RP+ +Q++  L+
Sbjct: 275 RDCWHAVPSQ--RPTFKQLVEDLD 296

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 38/264 (14%)
Query: 380 IAVKRV-SQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK + S  +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 56  VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 438 SHL---------------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS 482
            +L                     L+ +     A  +A G+ YL  +  +C+ HRD+ + 
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--KCI-HRDLAAR 172
Query: 483 NIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFG 541
           N+++  +   KI DFGLAR + H     +TT     + +MAPE       + +SDV+SFG
Sbjct: 173 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 232
Query: 542 IVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           ++  EI   G  P  P  P      ++ ++ L   G  ++   P  C +        +M+
Sbjct: 233 VLLWEIFTLGGSPY-PGVP------VEELFKLLKEGHRMDK--PSNCTNE-----LYMMM 278
Query: 601 VGLWCAHPDENLRPSIRQVIHVLN 624
              W A P +  RP+ +Q++  L+
Sbjct: 279 RDCWHAVPSQ--RPTFKQLVEDLD 300

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 95/186 (51%), Gaps = 21/186 (11%)
Query: 380 IAVKRV-SQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK + S  +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 48  VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 438 SHL---------------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS 482
            +L                     L+ +     A  +A G+ YL  +  +C+ HRD+ + 
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--KCI-HRDLAAR 164
Query: 483 NIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFG 541
           N+++  +   KI DFGLAR + H     +TT     + +MAPE       + +SDV+SFG
Sbjct: 165 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 224
Query: 542 IVALEI 547
           ++  EI
Sbjct: 225 VLLWEI 230

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 14/165 (8%)
Query: 395 EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK 454
           E  +E  ++ +L +  +V+++G C E +  +LV E    G L+ +L ++N  +  +   +
Sbjct: 52  ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 109
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           +   ++ G+ YL+E      VHRD+ + N++L +   AKI DFGL++ +   +  +    
Sbjct: 110 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYK 163
Query: 515 AGTMG-----YMAPECATTGKASKESDVYSFGIVALE-IACGRKP 553
           A T G     + APEC    K S +SDV+SFG++  E  + G+KP
Sbjct: 164 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 38/264 (14%)
Query: 380 IAVKRV-SQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK + S  +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 63  VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 438 SHL---------------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS 482
            +L                     L+ +     A  +A G+ YL  +  +C+ HRD+ + 
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--KCI-HRDLAAR 179
Query: 483 NIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFG 541
           N+++  +   KI DFGLAR + H     +TT     + +MAPE       + +SDV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 542 IVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI 600
           ++  EI   G  P  P  P      ++ ++ L   G  ++   P  C +        +M+
Sbjct: 240 VLLWEIFTLGGSPY-PGVP------VEELFKLLKEGHRMDK--PSNCTNE-----LYMMM 285
Query: 601 VGLWCAHPDENLRPSIRQVIHVLN 624
              W A P +  RP+ +Q++  L+
Sbjct: 286 RDCWHAVPSQ--RPTFKQLVEDLD 307

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 9/184 (4%)
Query: 374 RETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLLVYE 429
           +ET    AVK + +        ++   +E +I+S  R H  L QL         L  V E
Sbjct: 45  KETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVME 104
Query: 430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN 489
           F+  G L  H+ K         R+  A ++ S L++L +   + +++RD+K  N++LD  
Sbjct: 105 FVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMFLHD---KGIIYRDLKLDNVLLDHE 160
Query: 490 FNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
            + K+ DFG+ +      G  T    GT  Y+APE           D ++ G++  E+ C
Sbjct: 161 GHCKLADFGMCK-EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLC 219
Query: 550 GRKP 553
           G  P
Sbjct: 220 GHAP 223

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 20/200 (10%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK------ELLLVYEFMPN 433
           I V  V+   ++ IK+  + +K  S   HRN+    G   +K       +L LV EF   
Sbjct: 54  IKVMDVTGDEEEEIKQEINMLKKYSH--HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGA 111
Query: 434 GSLDSHLFK--ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           GS+ + L K  + + L  E+   I +++  GL +L +     V+HRDIK  N++L  N  
Sbjct: 112 GSV-TDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAE 167
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE---CATTGKASKE--SDVYSFGIVALE 546
            K+ DFG++  ++   G + T + GT  +MAPE   C     A+ +  SD++S GI A+E
Sbjct: 168 VKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE 226
Query: 547 IACGRKPINPKAPQGQVSLL 566
           +A G  P+    P   + L+
Sbjct: 227 MAEGAPPLCDMHPMRALFLI 246

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 95/186 (51%), Gaps = 21/186 (11%)
Query: 380 IAVKRV-SQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK + S  +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L 
Sbjct: 63  VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 438 SHL---------------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS 482
            +L                     L+ +     A  +A G+ YL  +  +C+ HRD+ + 
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--KCI-HRDLAAR 179
Query: 483 NIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFG 541
           N+++  +   KI DFGLAR + H     +TT     + +MAPE       + +SDV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 542 IVALEI 547
           ++  EI
Sbjct: 240 VLLWEI 245

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E+  +  LRH ++++L        ++++V E+   G L  ++ ++  +   E R +  Q 
Sbjct: 59  EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQ 116
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM 518
           +   + Y        +VHRD+K  N++LD N N KI DFGL+ ++      +T+   G+ 
Sbjct: 117 IICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSP 171
Query: 519 GYMAPECATTGK--ASKESDVYSFGIVALEIACGRKPIN 555
            Y APE    GK  A  E DV+S GIV   +  GR P +
Sbjct: 172 NYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 7/169 (4%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  I+  + H  +V+L      + +L L+ +F+  G L + L KE      + ++ +A+ 
Sbjct: 76  ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE- 134
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR-LVEHAKGSQTTVLAGT 517
           LA  L +L       +++RD+K  NI+LD   + K+ DFGL++  ++H K + +    GT
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGT 189
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL 566
           + YMAPE       ++ +D +SFG++  E+  G  P   K  +  ++++
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 7/169 (4%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           E  I+  + H  +V+L      + +L L+ +F+  G L + L KE      + ++ +A+ 
Sbjct: 77  ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE- 135
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR-LVEHAKGSQTTVLAGT 517
           LA  L +L       +++RD+K  NI+LD   + K+ DFGL++  ++H K + +    GT
Sbjct: 136 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGT 190
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL 566
           + YMAPE       ++ +D +SFG++  E+  G  P   K  +  ++++
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 239

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 34/196 (17%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK + + +    +E   SE+K++++L  H N+V LLG C     + L++E+   G L 
Sbjct: 78  VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 438 SHL------FKENSL----------------LTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
           ++L      F E+ +                LT+E     A  +A G+ +L  E++ CV 
Sbjct: 138 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL--EFKSCV- 194
Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT----MGYMAPECATTGKA 531
           HRD+ + N+++      KI DFGLAR +         V+ G     + +MAPE    G  
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLARDI---MSDSNYVVRGNARLPVKWMAPESLFEGIY 251
Query: 532 SKESDVYSFGIVALEI 547
           + +SDV+S+GI+  EI
Sbjct: 252 TIKSDVWSYGILLWEI 267

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 40/276 (14%)
Query: 379 YIAVKRVSQGSKQGIKEYASEVKIISRLRH-------------RNLVQLLGWCHEKKELL 425
           Y A+K++   +++ +    SEV +++ L H             RN V+ +    +K  L 
Sbjct: 33  YYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLF 91
Query: 426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
           +  E+  N +L   +  EN     +  +++ + +   L Y+     Q ++HRD+K  NI 
Sbjct: 92  IQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIF 148
Query: 486 LDSNFNAKIGDFGLARLVEHA-------------KGSQTTVLAGTMGYMAPECAT-TGKA 531
           +D + N KIGDFGLA+ V  +                  T   GT  Y+A E    TG  
Sbjct: 149 IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
Query: 532 SKESDVYSFGIVALEI----ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC 587
           +++ D+YS GI+  E+    + G + +N       VS +++  D   N   +E    RL 
Sbjct: 209 NEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVS-IEFPPDFDDNKMKVEKKIIRLL 267
Query: 588 RDFDGQQI--ERLMIVGLW--CAHPDENLRPSIRQV 619
            D D  +    R ++   W    H DE ++ +++ +
Sbjct: 268 IDHDPNKRPGARTLLNSGWLPVKHQDEVIKEALKSL 303

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ +    + +LLG C     + LV + MP G L  
Sbjct: 49  VAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTST-VQLVTQLMPYGCLLD 107
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           H+ +    L  +        +A G+ YL++     +VHRD+ + N+++ S  + KI DFG
Sbjct: 108 HVRENRGRLGSQDLLNWCMQIAKGMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFG 164
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LARL++      HA G +  +      +MA E     + + +SDV+S+G+   E+   G 
Sbjct: 165 LARLLDIDETEYHADGGKVPI-----KWMALESILRRRFTHQSDVWSYGVTVWELMTFGA 219
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++       DL   G+ L    P +C       I+  MI+ + C   D  
Sbjct: 220 KPYD-GIPAREIP------DLLEKGERLP--QPPIC------TIDVYMIM-VKCWMIDSE 263
Query: 612 LRPSIRQVI 620
            RP  R+++
Sbjct: 264 CRPRFRELV 272

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 380 IAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           +A+K++S   KQ  +++     EV+ + +LRH N +Q  G    +    LV E+    + 
Sbjct: 82  VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSAS 141
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
           D     +  L   E    +      GL YL       ++HRD+K+ NI+L      K+GD
Sbjct: 142 DLLEVHKKPLQEVEIA-AVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGD 197
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATT---GKASKESDVYSFGIVALEIACGRKP 553
           FG A ++  A         GT  +MAPE       G+   + DV+S GI  +E+A  + P
Sbjct: 198 FGSASIMAPA-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
Query: 554 I 554
           +
Sbjct: 253 L 253

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 14/189 (7%)
Query: 374 RETNSYIAVKRVS-QGSKQGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           RET+  +A+KRV      +G+   A  E+ ++  L+H+N+V+L    H  K+L LV+EF 
Sbjct: 24  RETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
            +  L  +    N  L  E        L  GL +      + V+HRD+K  N++++ N  
Sbjct: 84  -DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGE 139
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECATTGKA-SKESDVYSFGIVALEI 547
            K+ +FGLAR    A G      +    T+ Y  P+     K  S   D++S G +  E+
Sbjct: 140 LKLANFGLAR----AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
Query: 548 ACGRKPINP 556
           A   +P+ P
Sbjct: 196 ANAGRPLFP 204

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK   +      KE + SE  I+  L H ++V+L+G   E+   +++ E  P G L  
Sbjct: 39  VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGELGH 97
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           +L +  + L        +  +   + YL+     CV HRDI   NI++ S    K+GDFG
Sbjct: 98  YLERNKNSLKVLTLVLYSLQICKAMAYLESI--NCV-HRDIAVRNILVASPECVKLGDFG 154
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKP 553
           L+R +E     + +V    + +M+PE     + +  SDV+ F +   EI + G++P
Sbjct: 155 LSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK--ENSLLTWEFR--YK 454
           E KI++++  R +V L      K +L LV   M  G +  H++   E++    E R  + 
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-SQTTV 513
            AQ + SGL +L +   + +++RD+K  N++LD + N +I D GLA  VE   G ++T  
Sbjct: 295 TAQ-IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKG 348
Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKA 558
            AGT G+MAPE     +     D ++ G+   E+   R P   + 
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK--ENSLLTWEFR--YK 454
           E KI++++  R +V L      K +L LV   M  G +  H++   E++    E R  + 
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-SQTTV 513
            AQ + SGL +L +   + +++RD+K  N++LD + N +I D GLA  VE   G ++T  
Sbjct: 295 TAQ-IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKG 348
Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKA 558
            AGT G+MAPE     +     D ++ G+   E+   R P   + 
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK   +      KE + SE  I+  L H ++V+L+G   E+   +++ E  P G L  
Sbjct: 55  VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGELGH 113
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           +L +  + L        +  +   + YL+     CV HRDI   NI++ S    K+GDFG
Sbjct: 114 YLERNKNSLKVLTLVLYSLQICKAMAYLESI--NCV-HRDIAVRNILVASPECVKLGDFG 170
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKP 553
           L+R +E     + +V    + +M+PE     + +  SDV+ F +   EI + G++P
Sbjct: 171 LSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 7/182 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           R T +  A K V    +   +    E++ +S LRH  LV L     +  E++++YEFM  
Sbjct: 179 RATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 238
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN-- 491
           G L   +  E++ ++ +   +  + +  GL ++    E   VH D+K  NIM  +  +  
Sbjct: 239 GELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNE 295
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            K+ DFGL   ++  +  + T   GT  + APE A        +D++S G+++  +  G 
Sbjct: 296 LKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 353
Query: 552 KP 553
            P
Sbjct: 354 SP 355

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK--ENSLLTWEFR--YK 454
           E KI++++  R +V L      K +L LV   M  G +  H++   E++    E R  + 
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-SQTTV 513
            AQ + SGL +L +   + +++RD+K  N++LD + N +I D GLA  VE   G ++T  
Sbjct: 295 TAQ-IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKG 348
Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKA 558
            AGT G+MAPE     +     D ++ G+   E+   R P   + 
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK   +      KE + SE  I+  L H ++V+L+G   E+   +++ E  P G L  
Sbjct: 43  VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIM-ELYPYGELGH 101
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           +L +  + L        +  +   + YL+     CV HRDI   NI++ S    K+GDFG
Sbjct: 102 YLERNKNSLKVLTLVLYSLQICKAMAYLESI--NCV-HRDIAVRNILVASPECVKLGDFG 158
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKP 553
           L+R +E     + +V    + +M+PE     + +  SDV+ F +   EI + G++P
Sbjct: 159 LSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 380 IAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           +A+K++S   KQ  +++     EV+ + +LRH N +Q  G    +    LV E+    + 
Sbjct: 43  VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSAS 102
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
           D     +  L   E    +      GL YL       ++HRD+K+ NI+L      K+GD
Sbjct: 103 DLLEVHKKPLQEVEIA-AVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGD 158
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATT---GKASKESDVYSFGIVALEIACGRKP 553
           FG A ++  A         GT  +MAPE       G+   + DV+S GI  +E+A  + P
Sbjct: 159 FGSASIMAPA-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
Query: 554 I 554
           +
Sbjct: 214 L 214

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 7/182 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           R T +  A K V    +   +    E++ +S LRH  LV L     +  E++++YEFM  
Sbjct: 73  RATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 132
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN-- 491
           G L   +  E++ ++ +   +  + +  GL ++    E   VH D+K  NIM  +  +  
Sbjct: 133 GELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNE 189
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            K+ DFGL   ++  +  + T   GT  + APE A        +D++S G+++  +  G 
Sbjct: 190 LKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 247
Query: 552 KP 553
            P
Sbjct: 248 SP 249

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +    +++ + +  SE++++  + +H+N++ LLG C +   L ++  +   G+L 
Sbjct: 70  VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 438 SHLFKENSLLTWEFRYKIAQ----------------DLASGLLYLQEEWEQCVVHRDIKS 481
            +L +       E+ Y I +                 LA G+ YL     Q  +HRD+ +
Sbjct: 130 EYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAA 185
Query: 482 SNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
            N+++  N   KI DFGLAR + +     +TT     + +MAPE       + +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 541 GIVALEI 547
           G++  EI
Sbjct: 246 GVLMWEI 252

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK--ENSLLTWEFR--YK 454
           E KI++++  R +V L      K +L LV   M  G +  H++   E++    E R  + 
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-SQTTV 513
            AQ + SGL +L +   + +++RD+K  N++LD + N +I D GLA  VE   G ++T  
Sbjct: 295 TAQ-IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKG 348
Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKA 558
            AGT G+MAPE     +     D ++ G+   E+   R P   + 
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +KE     +E +I+  +    LV+L     +   L +V E+ 
Sbjct: 64  ETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYA 123
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+M+D    
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLMIDQQGY 179
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            K+ DFGLA+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 180 IKVTDFGLAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 552 KPINPKAP 559
            P     P
Sbjct: 236 PPFFADQP 243

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 29/190 (15%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +   +    KE   SE+KI+S L +H N+V LLG C     +L++ E+   G L 
Sbjct: 79  VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 438 SHLFKENSLLTWEFRY----------------KIAQDLASGLLYLQEEWEQCVVHRDIKS 481
           + L ++      E+ Y                  +  +A G+ +L  +   C+ HRD+ +
Sbjct: 139 NFLRRKRPP-GLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK--NCI-HRDVAA 194
Query: 482 SNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT----MGYMAPECATTGKASKESDV 537
            N++L +   AKIGDFGLAR + +       ++ G     + +MAPE       + +SDV
Sbjct: 195 RNVLLTNGHVAKIGDFGLARDIMN---DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 251
Query: 538 YSFGIVALEI 547
           +S+GI+  EI
Sbjct: 252 WSYGILLWEI 261

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR S+ S++G+  +E   EV I+ ++ H N++ L      + +++L+ E +  G L   L
Sbjct: 47  KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL   E    I Q L  G+ YL     + + H D+K  NIML D N    + K+ D
Sbjct: 107 AQKESLSEEEATSFIKQIL-DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  +E   G +   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 163 FGLAHEIE--DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K     +   ++E +  E   + +  H ++V+L+G   E   + ++ E    G L S
Sbjct: 41  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 99
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L      L        A  L++ L YL+ +     VHRDI + N+++ SN   K+GDFG
Sbjct: 100 FLQVRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFG 156
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           L+R +E +   + +     + +MAPE     + +  SDV+ FG+   EI   G KP
Sbjct: 157 LSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ LV   M  
Sbjct: 71  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLM-- 128
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G+    L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 129 GADLYKLLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLK 184
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 185 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
Query: 551 RKPINP 556
           R PI P
Sbjct: 245 R-PIFP 249

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR S+ S++G+  +E   EV I+ ++ H N++ L      + +++L+ E +  G L   L
Sbjct: 47  KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL   E    I Q L  G+ YL     + + H D+K  NIML D N    + K+ D
Sbjct: 107 AQKESLSEEEATSFIKQIL-DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  +E   G +   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 163 FGLAHEIE--DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR S+ S++G+  +E   EV I+ ++ H N++ L      + +++L+ E +  G L   L
Sbjct: 47  KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL   E    I Q L  G+ YL     + + H D+K  NIML D N    + K+ D
Sbjct: 107 AQKESLSEEEATSFIKQIL-DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  +E   G +   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 163 FGLAHEIE--DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR ++ S++G+  ++   EV I+  ++H N++ L      K +++L+ E +  G L   L
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL T E   +  + + +G+ YL       + H D+K  NIML D N      KI D
Sbjct: 106 AEKESL-TEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  ++   G++   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 162 FGLAHKIDF--GNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR ++ S++G+  ++   EV I+  ++H N++ L      K +++L+ E +  G L   L
Sbjct: 45  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 104
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL T E   +  + + +G+ YL       + H D+K  NIML D N      KI D
Sbjct: 105 AEKESL-TEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIID 160
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  ++   G++   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 161 FGLAHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 10/183 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           R T    A+K + +          +E+ ++ +++H N+V L           LV + +  
Sbjct: 31  RLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSG 90
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML---DSNF 490
           G L   +  E  + T +    + Q + S + YL E     +VHRD+K  N++    + N 
Sbjct: 91  GELFDRIL-ERGVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENS 146
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
              I DFGL+++ ++  G  +T   GT GY+APE       SK  D +S G++   + CG
Sbjct: 147 KIMITDFGLSKMEQN--GIMSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
Query: 551 RKP 553
             P
Sbjct: 204 YPP 206

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 6/186 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           + +   +AVK +    +Q  +   +EV I+   +H N+V++       +EL ++ EF+  
Sbjct: 67  KHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG 126
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
           G+L   + +    L  E    + + +   L YL     Q V+HRDIKS +I+L  +   K
Sbjct: 127 GALTDIVSQVR--LNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVK 181
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           + DFG    +      +   L GT  +MAPE  +    + E D++S GI+ +E+  G  P
Sbjct: 182 LSDFGFCAQISK-DVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
Query: 554 INPKAP 559
               +P
Sbjct: 241 YFSDSP 246

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 380 IAVKRVSQ-GSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +    +++ + +  SE++++  + +H+N++ LLG C +   L ++  +   G+L 
Sbjct: 70  VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 438 SHLFKENSLLTWEFRYKIAQ----------------DLASGLLYLQEEWEQCVVHRDIKS 481
            +L +       E+ Y I +                 LA G+ YL     Q  +HRD+ +
Sbjct: 130 EYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAA 185
Query: 482 SNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
            N+++  N   KI DFGLAR + +     +TT     + +MAPE       + +SDV+SF
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 541 GIVALEI 547
           G++  EI
Sbjct: 246 GVLMWEI 252

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR ++ S++G+  ++   EV I+  ++H N++ L      K +++L+ E +  G L   L
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL T E   +  + + +G+ YL       + H D+K  NIML D N      KI D
Sbjct: 106 AEKESL-TEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  ++   G++   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 162 FGLAHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR S+ S++G+  +E   EV I+ ++ H N++ L      + +++L+ E +  G L   L
Sbjct: 47  KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL   E    I Q L  G+ YL     + + H D+K  NIML D N    + K+ D
Sbjct: 107 AQKESLSEEEATSFIKQIL-DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  +E   G +   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 163 FGLAHEIE--DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR ++ S++G+  ++   EV I+  ++H N++ L      K +++L+ E +  G L   L
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL T E   +  + + +G+ YL       + H D+K  NIML D N      KI D
Sbjct: 106 AEKESL-TEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  ++   G++   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 162 FGLAHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR ++ S++G+  ++   EV I+  ++H N++ L      K +++L+ E +  G L   L
Sbjct: 45  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 104
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL T E   +  + + +G+ YL       + H D+K  NIML D N      KI D
Sbjct: 105 AEKESL-TEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIID 160
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  ++   G++   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 161 FGLAHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR ++ S++G+  ++   EV I+  ++H N++ L      K +++L+ E +  G L   L
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL T E   +  + + +G+ YL       + H D+K  NIML D N      KI D
Sbjct: 106 AEKESL-TEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  ++   G++   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 162 FGLAHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR S+ S++G+  +E   EV I+ ++ H N++ L      + +++L+ E +  G L   L
Sbjct: 47  KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL   E    I Q L  G+ YL     + + H D+K  NIML D N    + K+ D
Sbjct: 107 AQKESLSEEEATSFIKQIL-DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  +E   G +   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 163 FGLAHEIE--DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR ++ S++G+  ++   EV I+  ++H N++ L      K +++L+ E +  G L   L
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL T E   +  + + +G+ YL       + H D+K  NIML D N      KI D
Sbjct: 106 AEKESL-TEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  ++   G++   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 162 FGLAHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR ++ S++G+  ++   EV I+  ++H N++ L      K +++L+ E +  G L   L
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL T E   +  + + +G+ YL       + H D+K  NIML D N      KI D
Sbjct: 106 AEKESL-TEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  ++   G++   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 162 FGLAHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR ++ S++G+  ++   EV I+  ++H N++ L      K +++L+ E +  G L   L
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL T E   +  + + +G+ YL       + H D+K  NIML D N      KI D
Sbjct: 106 AEKESL-TEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  ++   G++   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 162 FGLAHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 29/201 (14%)
Query: 374 RETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL------LL 426
           ++T   +A+K+  Q  S +  + +  E++I+ +L H N+V         ++L      LL
Sbjct: 37  QDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLL 96
Query: 427 VYEFMPNGSLDSHL--------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
             E+   G L  +L         KE  + T      +  D++S L YL E     ++HRD
Sbjct: 97  AMEYCEGGDLRKYLNQFENCCGLKEGPIRT------LLSDISSALRYLHENR---IIHRD 147
Query: 479 IKSSNIMLD---SNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES 535
           +K  NI+L         KI D G A+  E  +G   T   GT+ Y+APE     K +   
Sbjct: 148 LKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQYLAPELLEQKKYTVTV 205
Query: 536 DVYSFGIVALEIACGRKPINP 556
           D +SFG +A E   G +P  P
Sbjct: 206 DYWSFGTLAFECITGFRPFLP 226

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+M
Sbjct: 64  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYM 123
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D    
Sbjct: 124 PGGDMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            K+ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 180 IKVADFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 552 KPINPKAP 559
            P     P
Sbjct: 236 PPFFADQP 243

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 29/201 (14%)
Query: 374 RETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL------LL 426
           ++T   +A+K+  Q  S +  + +  E++I+ +L H N+V         ++L      LL
Sbjct: 36  QDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLL 95
Query: 427 VYEFMPNGSLDSHL--------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
             E+   G L  +L         KE  + T      +  D++S L YL E     ++HRD
Sbjct: 96  AMEYCEGGDLRKYLNQFENCCGLKEGPIRT------LLSDISSALRYLHENR---IIHRD 146
Query: 479 IKSSNIMLD---SNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES 535
           +K  NI+L         KI D G A+  E  +G   T   GT+ Y+APE     K +   
Sbjct: 147 LKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQYLAPELLEQKKYTVTV 204
Query: 536 DVYSFGIVALEIACGRKPINP 556
           D +SFG +A E   G +P  P
Sbjct: 205 DYWSFGTLAFECITGFRPFLP 225

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+M
Sbjct: 64  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYM 123
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D    
Sbjct: 124 PGGDMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            K+ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 180 IKVADFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 552 KPINPKAP 559
            P     P
Sbjct: 236 PPFFADQP 243

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K     +   ++E +  E   + +  H ++V+L+G   E   + ++ E    G L S
Sbjct: 69  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 127
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L      L        A  L++ L YL+ +     VHRDI + N+++ SN   K+GDFG
Sbjct: 128 FLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFG 184
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           L+R +E +   + +     + +MAPE     + +  SDV+ FG+   EI   G KP
Sbjct: 185 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 240

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR ++ S++G+  ++   EV I+  ++H N++ L      K +++L+ E +  G L   L
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL T E   +  + + +G+ YL       + H D+K  NIML D N      KI D
Sbjct: 106 AEKESL-TEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  ++   G++   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 162 FGLAHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K     +   ++E +  E   + +  H ++V+L+G   E   + ++ E    G L S
Sbjct: 41  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 99
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L      L        A  L++ L YL+ +     VHRDI + N+++ SN   K+GDFG
Sbjct: 100 FLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFG 156
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           L+R +E +   + +     + +MAPE     + +  SDV+ FG+   EI   G KP
Sbjct: 157 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR ++ S++G+  ++   EV I+  ++H N++ L      K +++L+ E +  G L   L
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL T E   +  + + +G+ YL       + H D+K  NIML D N      KI D
Sbjct: 106 AEKESL-TEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  ++   G++   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 162 FGLAHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS--QTTVLAG 516
           +A     L    +  ++HRD+K +NIM+ +    K+ DFG+AR +  +  S  QT  + G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAP 559
           T  Y++PE A        SDVYS G V  E+  G  P    +P
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K     +   ++E +  E   + +  H ++V+L+G   E   + ++ E    G L S
Sbjct: 41  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 99
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L      L        A  L++ L YL+ +     VHRDI + N+++ SN   K+GDFG
Sbjct: 100 FLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFG 156
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           L+R +E +   + +     + +MAPE     + +  SDV+ FG+   EI   G KP
Sbjct: 157 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS--QTTVLAG 516
           +A     L    +  ++HRD+K +NIM+ +    K+ DFG+AR +  +  S  QT  + G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAP 559
           T  Y++PE A        SDVYS G V  E+  G  P    +P
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCH---------EKKEL 424
           R T    AVK +   +++   E   EV+  +R     L Q+ G  H             +
Sbjct: 116 RATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFM 175
Query: 425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
            LV++ M  G L  +L ++ +L   E R  I + L   + +L       +VHRD+K  NI
Sbjct: 176 FLVFDLMRKGELFDYLTEKVALSEKETR-SIMRSLLEAVSFLHA---NNIVHRDLKPENI 231
Query: 485 MLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE---CA---TTGKASKESDVY 538
           +LD N   ++ DFG +  +E   G +   L GT GY+APE   C+   T     KE D++
Sbjct: 232 LLDDNMQIRLSDFGFSCHLE--PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLW 289
Query: 539 SFGIVALEIACGRKP 553
           + G++   +  G  P
Sbjct: 290 ACGVILFTLLAGSPP 304

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
Query: 379 YIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           +I  +R+S  S++G+  +E   EV I+  +RH N++ L      K +++L+ E +  G L
Sbjct: 44  FIKKRRLS-SSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL 102
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM-LDSNF---NA 492
              L ++ S LT +   +  + +  G+ YL     + + H D+K  NIM LD N      
Sbjct: 103 FDFLAEKES-LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRI 158
Query: 493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRK 552
           K+ DFG+A  +E   G++   + GT  ++APE         E+D++S G++   +  G  
Sbjct: 159 KLIDFGIAHKIE--AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 553 P 553
           P
Sbjct: 217 P 217

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS--QTTVLAG 516
           +A     L    +  ++HRD+K +NIM+ +    K+ DFG+AR +  +  S  QT  + G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAP 559
           T  Y++PE A        SDVYS G V  E+  G  P    +P
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS--QTTVLAG 516
           +A     L    +  ++HRD+K +NIM+ +    K+ DFG+AR +  +  S  QT  + G
Sbjct: 139 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 198
Query: 517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAP 559
           T  Y++PE A        SDVYS G V  E+  G  P    +P
Sbjct: 199 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 241

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K     +   ++E +  E   + +  H ++V+L+G   E   + ++ E    G L S
Sbjct: 38  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 96
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L      L        A  L++ L YL+ +     VHRDI + N+++ SN   K+GDFG
Sbjct: 97  FLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFG 153
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           L+R +E +   + +     + +MAPE     + +  SDV+ FG+   EI   G KP
Sbjct: 154 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 209

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
Query: 379 YIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
           +I  +R+S  S++G+  +E   EV I+  +RH N++ L      K +++L+ E +  G L
Sbjct: 37  FIKKRRLS-SSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL 95
Query: 437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM-LDSNF---NA 492
              L ++ S LT +   +  + +  G+ YL     + + H D+K  NIM LD N      
Sbjct: 96  FDFLAEKES-LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRI 151
Query: 493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRK 552
           K+ DFG+A  +E   G++   + GT  ++APE         E+D++S G++   +  G  
Sbjct: 152 KLIDFGIAHKIE--AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 209
Query: 553 P 553
           P
Sbjct: 210 P 210

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR ++ S++G+  ++   EV I+  ++H N++ L      K +++L+ E +  G L   L
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL T E   +  + + +G+ YL       + H D+K  NIML D N      KI D
Sbjct: 106 AEKESL-TEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  ++   G++   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 162 FGLAHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS--QTTVLAG 516
           +A     L    +  ++HRD+K +NIM+ +    K+ DFG+AR +  +  S  QT  + G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAP 559
           T  Y++PE A        SDVYS G V  E+  G  P    +P
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K     +   ++E +  E   + +  H ++V+L+G   E   + ++ E    G L S
Sbjct: 43  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 101
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L      L        A  L++ L YL+ +     VHRDI + N+++ SN   K+GDFG
Sbjct: 102 FLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFG 158
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           L+R +E +   + +     + +MAPE     + +  SDV+ FG+   EI   G KP
Sbjct: 159 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 214

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K     +   ++E +  E   + +  H ++V+L+G   E   + ++ E    G L S
Sbjct: 46  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 104
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L      L        A  L++ L YL+ +     VHRDI + N+++ SN   K+GDFG
Sbjct: 105 FLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFG 161
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           L+R +E +   + +     + +MAPE     + +  SDV+ FG+   EI   G KP
Sbjct: 162 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 217

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR ++ S++G+  ++   EV I+  ++H N++ L      K +++L+ E +  G L   L
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL T E   +  + + +G+ YL       + H D+K  NIML D N      KI D
Sbjct: 106 AEKESL-TEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  ++   G++   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 162 FGLAHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K     +   ++E +  E   + +  H ++V+L+G   E   + ++ E    G L S
Sbjct: 44  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 102
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L      L        A  L++ L YL+ +     VHRDI + N+++ SN   K+GDFG
Sbjct: 103 FLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFG 159
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           L+R +E +   + +     + +MAPE     + +  SDV+ FG+   EI   G KP
Sbjct: 160 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 215

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 398 SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKI-A 456
           +E +I+ ++  R +V L      K  L LV   M  G L  H++        E R    A
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 457 QDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG 516
            ++  GL  L  E    +V+RD+K  NI+LD + + +I D GLA  V   +G       G
Sbjct: 293 AEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVG 347
Query: 517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPK 557
           T+GYMAPE     + +   D ++ G +  E+  G+ P   +
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 380 IAVKRVS-QGSKQGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +A+KR+      +GI   A  E+ ++  L H N+V L+   H ++ L LV+EFM      
Sbjct: 48  VALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL-- 105
Query: 438 SHLFKENSLLTWEFRYKI-AQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
             +  EN     + + KI    L  G+ +  +     ++HRD+K  N++++S+   K+ D
Sbjct: 106 KKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLAD 162
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECAT-TGKASKESDVYSFGIVALEIACGRKPIN 555
           FGLAR       S T  +  T+ Y AP+    + K S   D++S G +  E+  G KP+ 
Sbjct: 163 FGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG-KPLF 220
Query: 556 P 556
           P
Sbjct: 221 P 221

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS 435
           T   +A K +     +  +E  +E+ ++++L H NL+QL      K +++LV E++  G 
Sbjct: 113 TGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172
Query: 436 LDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA--- 492
           L   +  E+  LT        + +  G+ ++ + +   ++H D+K  NI+   N +A   
Sbjct: 173 LFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILC-VNRDAKQI 228
Query: 493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRK 552
           KI DFGLAR   +    +  V  GT  ++APE       S  +D++S G++A  +  G  
Sbjct: 229 KIIDFGLAR--RYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLS 286
Query: 553 P-INPKAPQGQVSLLQWVWDL 572
           P +     +   ++L   WDL
Sbjct: 287 PFLGDNDAETLNNILACRWDL 307

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLASGLLY 465
           L QL         L  V E++  G L  H+     FKE   + +      A ++A GL +
Sbjct: 83  LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY------AAEIAIGLFF 136
Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA-KGSQTTVLAGTMGYMAPE 524
           LQ    + +++RD+K  N+MLDS  + KI DFG+ +  E+   G  T    GT  Y+APE
Sbjct: 137 LQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPE 191
Query: 525 CATTGKASKESDVYSFGIVALEIACGRKP 553
                   K  D ++FG++  E+  G+ P
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR ++ S++G+  ++   EV I+  ++H N++ L      K +++L+ E +  G L   L
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL 105
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL T E   +  + + +G+ YL       + H D+K  NIML D N      KI D
Sbjct: 106 AEKESL-TEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  ++   G++   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 162 FGLAHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +KE     +E +I+  +    LV+L     +   L +V E+ 
Sbjct: 64  ETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYA 123
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+M+D    
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLMIDQQGY 179
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            ++ DFGLA+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 180 IQVTDFGLAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 552 KPINPKAP 559
            P     P
Sbjct: 236 PPFFADQP 243

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 15/223 (6%)
Query: 340 KRFPYKELALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQG---SKQGIKEY 396
           K  P  ++ L   DF   + L             ++TN + A+K + +        ++  
Sbjct: 6   KERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT 65
Query: 397 ASEVKIIS-RLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKI 455
             E +++S    H  L  +      K+ L  V E++  G L  H+    S   ++     
Sbjct: 66  MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRAT 122
Query: 456 --AQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-SQTT 512
             A ++  GL +L     + +V+RD+K  NI+LD + + KI DFG+ +  E+  G ++T 
Sbjct: 123 FYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTN 177
Query: 513 VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPIN 555
              GT  Y+APE     K +   D +SFG++  E+  G+ P +
Sbjct: 178 EFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 220

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 51  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 111 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLK 164
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 165 IXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
Query: 551 RKPINP 556
           R PI P
Sbjct: 225 R-PIFP 229

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 398 SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKI-A 456
           +E +I+ ++  R +V L      K  L LV   M  G L  H++        E R    A
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 457 QDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG 516
            ++  GL  L  E    +V+RD+K  NI+LD + + +I D GLA  V   +G       G
Sbjct: 293 AEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVG 347
Query: 517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPK 557
           T+GYMAPE     + +   D ++ G +  E+  G+ P   +
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS----LDSHLFKENSLLTWEFRYK 454
           E+ ++S+     + +  G   +  +L ++ E++  GS    L +  F E  + T      
Sbjct: 71  EITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIAT------ 124
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           + +++  GL YL  E +   +HRDIK++N++L    + K+ DFG+A  +   +  + T  
Sbjct: 125 MLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-F 180
Query: 515 AGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
            GT  +MAPE         ++D++S GI A+E+A G  P
Sbjct: 181 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 380 IAVKRVS-QGSKQGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +A+KR+      +GI   A  E+ ++  L H N+V L+   H ++ L LV+EFM      
Sbjct: 48  VALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL-- 105
Query: 438 SHLFKENSLLTWEFRYKI-AQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD 496
             +  EN     + + KI    L  G+ +  +     ++HRD+K  N++++S+   K+ D
Sbjct: 106 KKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLAD 162
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECAT-TGKASKESDVYSFGIVALEIACGRKPIN 555
           FGLAR       S T  +  T+ Y AP+    + K S   D++S G +  E+  G KP+ 
Sbjct: 163 FGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG-KPLF 220
Query: 556 P 556
           P
Sbjct: 221 P 221

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K     +   ++E +  E   + +  H ++V+L+G   E   + ++ E    G L S
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 479
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L      L        A  L++ L YL+ +     VHRDI + N+++ SN   K+GDFG
Sbjct: 480 FLQVRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFG 536
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           L+R +E +   + +     + +MAPE     + +  SDV+ FG+   EI   G KP
Sbjct: 537 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 55  VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 115 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLK 168
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
Query: 551 RKPINP 556
           R PI P
Sbjct: 229 R-PIFP 233

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 31/236 (13%)
Query: 339 PKRFPYKELALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIK-EYA 397
           PKR  Y      ++DF     L             + T   +A+K++    K        
Sbjct: 2   PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 398 SEVKIISRLRHRNLVQLLGWCHEKK-----ELLLVYEFMPNGSLDSHLFKENSLLTWE-F 451
            E+KI+   +H N++ +             E+ ++ E M     D H      +L+ +  
Sbjct: 58  REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM---QTDLHRVISTQMLSDDHI 114
Query: 452 RYKIAQDL-ASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-- 508
           +Y I Q L A  +L+        V+HRD+K SN++++SN + K+ DFGLAR+++ +    
Sbjct: 115 QYFIYQTLRAVKVLHGSN-----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 509 -------SQTTVLAGTMGYMAPECA-TTGKASKESDVYSFGIVALEIACGRKPINP 556
                  S  T    T  Y APE   T+ K S+  DV+S G +  E+   R+PI P
Sbjct: 170 SEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFP 224

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 12/184 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR    S++G+  +E   EV I+  +RH N++ L      K +++L+ E +  G L   L
Sbjct: 61  KRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 120
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM-LDSNF---NAKIGD 496
            ++ S LT +   +  + +  G+ YL     + + H D+K  NIM LD N      K+ D
Sbjct: 121 AEKES-LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLID 176
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINP 556
           FG+A  +E   G++   + GT  ++APE         E+D++S G++   +  G  P   
Sbjct: 177 FGIAHKIE--AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 234
Query: 557 KAPQ 560
           +  Q
Sbjct: 235 ETKQ 238

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 13/222 (5%)
Query: 340 KRFPYKELALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQG---SKQGIKEY 396
           K  P  ++ L   DF   + L             ++TN + A+K + +        ++  
Sbjct: 5   KERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT 64
Query: 397 ASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSL-LTWEFRYK 454
             E +++S    H  L  +      K+ L  V E++  G L  H+   +   L+    Y 
Sbjct: 65  MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY- 123
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-SQTTV 513
            A ++  GL +L     + +V+RD+K  NI+LD + + KI DFG+ +  E+  G ++T  
Sbjct: 124 -AAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNX 177
Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPIN 555
             GT  Y+APE     K +   D +SFG++  E+  G+ P +
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 219

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 31/236 (13%)
Query: 339 PKRFPYKELALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIK-EYA 397
           PKR  Y      ++DF     L             + T   +A+K++    K        
Sbjct: 2   PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 398 SEVKIISRLRHRNLVQLLGWCHEKK-----ELLLVYEFMPNGSLDSHLFKENSLLTWE-F 451
            E+KI+   +H N++ +             E+ ++ E M     D H      +L+ +  
Sbjct: 58  REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM---QTDLHRVISTQMLSDDHI 114
Query: 452 RYKIAQDL-ASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-- 508
           +Y I Q L A  +L+        V+HRD+K SN++++SN + K+ DFGLAR+++ +    
Sbjct: 115 QYFIYQTLRAVKVLHGSN-----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 509 -------SQTTVLAGTMGYMAPECA-TTGKASKESDVYSFGIVALEIACGRKPINP 556
                  S  T    T  Y APE   T+ K S+  DV+S G +  E+   R+PI P
Sbjct: 170 SEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFP 224

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 51  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 111 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLK 164
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 165 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
Query: 551 RKPINP 556
           R PI P
Sbjct: 225 R-PIFP 229

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 51  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 111 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLK 164
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 165 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
Query: 551 RKPINP 556
           R PI P
Sbjct: 225 R-PIFP 229

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 34/196 (17%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
           +AVK +   +    KE   SE+KI+S L +H N+V LLG C     +L++ E+   G L 
Sbjct: 64  VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 438 SHLFKENSLLT--------------------WEFR--YKIAQDLASGLLYLQEEWEQCVV 475
           + L ++   +                      E R     +  +A G+ +L  +   C+ 
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK--NCI- 180
Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT----MGYMAPECATTGKA 531
           HRD+ + N++L +   AKIGDFGLAR + +       ++ G     + +MAPE       
Sbjct: 181 HRDVAARNVLLTNGHVAKIGDFGLARDIMN---DSNYIVKGNARLPVKWMAPESIFDCVY 237
Query: 532 SKESDVYSFGIVALEI 547
           + +SDV+S+GI+  EI
Sbjct: 238 TVQSDVWSYGILLWEI 253

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Query: 383 KRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           KR S+ S++G+  +E   EV I+ ++ H N++ L      + +++L+ E +  G L   L
Sbjct: 47  KRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNF---NAKIGD 496
            ++ SL   E    I Q L  G+ YL     + + H D+K  NIML D N    + K+ D
Sbjct: 107 AQKESLSEEEATSFIKQIL-DGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  +E   G +   + GT  ++APE         E+D++S G++   +  G  P
Sbjct: 163 FGLAHEIE--DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 64  KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
            P G + SHL +         R+  AQ + +   YL       +++RD+K  N+M+D   
Sbjct: 124 APGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLMIDQQG 179
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             K+ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 180 YIKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 236 YPPFFADQP 244

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 31/236 (13%)
Query: 339 PKRFPYKELALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQGSKQGIK-EYA 397
           PKR  Y      ++DF     L             + T   +A+K++    K        
Sbjct: 2   PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 398 SEVKIISRLRHRNLVQLLGWCHEKK-----ELLLVYEFMPNGSLDSHLFKENSLLTWE-F 451
            E+KI+   +H N++ +             E+ ++ E M     D H      +L+ +  
Sbjct: 58  REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM---QTDLHRVISTQMLSDDHI 114
Query: 452 RYKIAQDL-ASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK--- 507
           +Y I Q L A  +L+        V+HRD+K SN++++SN + K+ DFGLAR+++ +    
Sbjct: 115 QYFIYQTLRAVKVLHGSN-----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 508 ----GSQTTVL--AGTMGYMAPECA-TTGKASKESDVYSFGIVALEIACGRKPINP 556
               G Q+ ++    T  Y APE   T+ K S+  DV+S G +  E+   R+PI P
Sbjct: 170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFP 224

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 55  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 115 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLK 168
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
Query: 551 RKPINP 556
           R PI P
Sbjct: 229 R-PIFP 233

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+ 
Sbjct: 64  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYA 123
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+M+D    
Sbjct: 124 PGGEMFSHLRRIGRFXEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLMIDQQGY 179
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            K+ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 180 IKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 552 KPINPKAP 559
            P     P
Sbjct: 236 PPFFADQP 243

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 51  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 111 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 164
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 165 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
Query: 551 RKPINP 556
           R PI P
Sbjct: 225 R-PIFP 229

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 56  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 115
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 116 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 169
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 170 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 229
Query: 551 RKPINP 556
           R PI P
Sbjct: 230 R-PIFP 234

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 57  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 116
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 117 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 170
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 171 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 230
Query: 551 RKPINP 556
           R PI P
Sbjct: 231 R-PIFP 235

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 48  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 107
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 108 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 161
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 162 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 221
Query: 551 RKPINP 556
           R PI P
Sbjct: 222 R-PIFP 226

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 55  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 115 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 168
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
Query: 551 RKPINP 556
           R PI P
Sbjct: 229 R-PIFP 233

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 49  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 108
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 109 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 162
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 163 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 222
Query: 551 RKPINP 556
           R PI P
Sbjct: 223 R-PIFP 227

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 53  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 113 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 166
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 167 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
Query: 551 RKPINP 556
           R PI P
Sbjct: 227 R-PIFP 231

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 59  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 118
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 119 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 172
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 173 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 232
Query: 551 RKPINP 556
           R PI P
Sbjct: 233 R-PIFP 237

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 51  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 111 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 164
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 165 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
Query: 551 RKPINP 556
           R PI P
Sbjct: 225 R-PIFP 229

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 49  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 108
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 109 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 162
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 163 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 222
Query: 551 RKPINP 556
           R PI P
Sbjct: 223 R-PIFP 227

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLASGLLY 465
           L QL         L  V E++  G L  H+     FKE   + +      A ++A GL +
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY------AAEIAIGLFF 457
Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA-KGSQTTVLAGTMGYMAPE 524
           LQ    + +++RD+K  N+MLDS  + KI DFG+ +  E+   G  T    GT  Y+APE
Sbjct: 458 LQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPE 512
Query: 525 CATTGKASKESDVYSFGIVALEIACGRKPI 554
                   K  D ++FG++  E+  G+ P 
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 71  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 130
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 131 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 184
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 185 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
Query: 551 RKPINP 556
           R PI P
Sbjct: 245 R-PIFP 249

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 40/276 (14%)
Query: 379 YIAVKRVSQGSKQGIKEYASEVKIISRLRH-------------RNLVQLLGWCHEKKELL 425
           Y A+K++   +++ +    SEV +++ L H             RN V+      +K  L 
Sbjct: 33  YYAIKKIRH-TEEKLSTILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLF 91
Query: 426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
           +  E+  N +L   +  EN     +  +++ + +   L Y+     Q ++HR++K  NI 
Sbjct: 92  IQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRNLKPXNIF 148
Query: 486 LDSNFNAKIGDFGLARLVEHA-------------KGSQTTVLAGTMGYMAPECAT-TGKA 531
           +D + N KIGDFGLA+ V  +                  T   GT  Y+A E    TG  
Sbjct: 149 IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHY 208
Query: 532 SKESDVYSFGIVALE----IACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC 587
           +++ D YS GI+  E     + G + +N       VS +++  D   N   +E    RL 
Sbjct: 209 NEKIDXYSLGIIFFEXIYPFSTGXERVNILKKLRSVS-IEFPPDFDDNKXKVEKKIIRLL 267
Query: 588 RDFDGQQI--ERLMIVGLW--CAHPDENLRPSIRQV 619
            D D  +    R ++   W    H DE ++ +++ +
Sbjct: 268 IDHDPNKRPGARTLLNSGWLPVKHQDEVIKEALKSL 303

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 421 KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE------WEQCV 474
           + E LLV E+ PNGSL  +L    S   W    ++A  +  GL YL  E      ++  +
Sbjct: 84  RMEYLLVMEYYPNGSLXKYLSLHTS--DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI 141
Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLA------RLVEHAKGSQTTVL-AGTMGYMAPECAT 527
            HRD+ S N+++ ++    I DFGL+      RLV   +     +   GT+ YMAPE   
Sbjct: 142 SHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLE 201
Query: 528 TG-------KASKESDVYSFGIVALEI 547
                     A K+ D+Y+ G++  EI
Sbjct: 202 GAVNLRDXESALKQVDMYALGLIYWEI 228

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 51  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLD 109
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 110 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 166
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 167 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 221
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 222 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 265
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 266 SRPKFRELI 274

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E++
Sbjct: 64  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D    
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            K+ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 180 IKVADFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 552 KPINPKAP 559
            P     P
Sbjct: 236 PPFFADQP 243

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 72  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 130
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 131 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 187
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 188 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 242
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 243 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 286
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 287 SRPKFRELI 295

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS----LDSHLFKENSLLTWEFRYK 454
           E+ ++S+     + +  G   +  +L ++ E++  GS    L+     E  + T      
Sbjct: 55  EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ 108
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           I +++  GL YL  E +   +HRDIK++N++L  +   K+ DFG+A  +   +  + T  
Sbjct: 109 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-F 164
Query: 515 AGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
            GT  +MAPE         ++D++S GI A+E+A G  P
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS--QTTVLAG 516
           +A     L    +  ++HRD+K +NI++ +    K+ DFG+AR +  +  S  QT  + G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG 181
Query: 517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAP 559
           T  Y++PE A        SDVYS G V  E+  G  P    +P
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 48  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGXLLD 106
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 107 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 163
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 164 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 218
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 219 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 262
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 263 SRPKFRELI 271

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS----LDSHLFKENSLLTWEFRYK 454
           E+ ++S+     + +  G   +  +L ++ E++  GS    L+     E  + T      
Sbjct: 75  EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ 128
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           I +++  GL YL  E +   +HRDIK++N++L  +   K+ DFG+A  +   +  + T  
Sbjct: 129 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-F 184
Query: 515 AGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
            GT  +MAPE         ++D++S GI A+E+A G  P
Sbjct: 185 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 48  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLD 106
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 107 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 163
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 164 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 218
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 219 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 262
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 263 SRPKFRELI 271

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+ 
Sbjct: 64  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYA 123
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+M+D    
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLMIDQQGY 179
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            K+ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 180 IKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 552 KPINPKAP 559
            P     P
Sbjct: 236 PPFFADQP 243

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 49  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLD 107
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 108 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 164
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 165 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 220 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 263
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 264 SRPKFRELI 272

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 56  KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 115
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +P G + SHL +         R+  AQ +     YL       +++RD+K  N+++D   
Sbjct: 116 VPGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQG 171
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 172 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 228 YPPFFADQP 236

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 379 YIAVKRVSQGS---KQGIKEYASEVKIISR-LRHRNLVQLLGWCHEKKELLLVYEFMPNG 434
           + AVK + + +   K+  K   SE  ++ + ++H  LV L        +L  V +++  G
Sbjct: 65  FYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 124
Query: 435 SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKI 494
            L  HL +E   L    R+  A ++AS L YL       +V+RD+K  NI+LDS  +  +
Sbjct: 125 ELFYHLQRERCFLEPRARF-YAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVL 180
Query: 495 GDFGLARL-VEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
            DFGL +  +EH   S T+   GT  Y+APE        +  D +  G V  E+  G  P
Sbjct: 181 TDFGLCKENIEH--NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 50  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLD 108
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 109 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 165
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 166 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 221 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 264
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 265 SRPKFRELI 273

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 54  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLD 112
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 113 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 169
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 170 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 225 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 268
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 269 SRPKFRELI 277

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 47  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLD 105
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 106 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 162
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 163 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 218 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 261
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 262 SRPKFRELI 270

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 17/151 (11%)
Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLASGLLY 465
           L QL         L  V E++  G L  H+     FKE   + +      A +++ GL +
Sbjct: 82  LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFY------AAEISIGLFF 135
Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH-AKGSQTTVLAGTMGYMAPE 524
           L +   + +++RD+K  N+MLDS  + KI DFG+ +  EH   G  T    GT  Y+APE
Sbjct: 136 LHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIAPE 190
Query: 525 CATTGKASKESDVYSFGIVALEIACGRKPIN 555
                   K  D +++G++  E+  G+ P +
Sbjct: 191 IIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 47  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 105
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 106 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 162
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 163 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 218 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 261
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 262 SRPKFRELI 270

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS 435
           T   +A+++++   +   +   +E+ ++   ++ N+V  L       EL +V E++  GS
Sbjct: 44  TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGS 103
Query: 436 LDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
           L + +  E  +   +    + ++    L +L       V+HRDIKS NI+L  + + K+ 
Sbjct: 104 L-TDVVTETCMDEGQIA-AVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLT 158
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           DFG    +   +  ++T + GT  +MAPE  T      + D++S GI+A+E+  G  P
Sbjct: 159 DFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 24/190 (12%)
Query: 376 TNSYIAVKRVSQGSKQG-IKEYASEVKIISRL-RHRNLVQLLGWCHEKK-ELLLVYEFMP 432
           T   +AVK + +G+     +   SE+KI+  +  H N+V LLG C +    L+++ EF  
Sbjct: 56  TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 433 NGSLDSHL---------FKE--NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKS 481
            G+L ++L         +K+     LT E     +  +A G+ +L     +  +HRD+ +
Sbjct: 116 FGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLAS---RKXIHRDLAA 172
Query: 482 SNIMLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASKESDV 537
            NI+L      KI DFGLAR +    ++ +     +    + +MAPE       + +SDV
Sbjct: 173 RNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL---PLKWMAPETIFDRVYTIQSDV 229
Query: 538 YSFGIVALEI 547
           +SFG++  EI
Sbjct: 230 WSFGVLLWEI 239

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 374 RETNSYIAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R   + +AVK + +  S   +++  SE  ++ ++ H ++++L G C +   LLL+ E+  
Sbjct: 50  RAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAK 109
Query: 433 NGSLDSHLFKENSL-----------------------LTWEFRYKIAQDLASGLLYLQEE 469
            GSL   L +   +                       LT       A  ++ G+ YL   
Sbjct: 110 YGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA-- 167
Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPEC 525
            E  +VHRD+ + NI++      KI DFGL+R V     + K SQ  +    + +MA E 
Sbjct: 168 -EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRI---PVKWMAIES 223
Query: 526 ATTGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQ 567
                 + +SDV+SFG++  EI   G  P     P+   +LL+
Sbjct: 224 LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK 266

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 50  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 108
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 109 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 165
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 166 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 221 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 264
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 265 SRPKFRELI 273

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 49  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 107
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 108 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 164
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 165 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 220 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 263
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 264 SRPKFRELI 272

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 47  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGXLLD 105
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 106 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 162
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 163 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 218 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 261
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 262 SRPKFRELI 270

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 50  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 108
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 109 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 165
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 166 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 221 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 264
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 265 SRPKFRELI 273

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A++++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 55  VAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 115 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 168
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
Query: 551 RKPINP 556
           R PI P
Sbjct: 229 R-PIFP 233

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 55  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 115 DLYK--LLKCQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 168
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
Query: 551 RKPINP 556
           R PI P
Sbjct: 229 R-PIFP 233

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 47  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 105
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 106 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 162
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 163 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 218 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 261
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 262 SRPKFRELI 270

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 53  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 111
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 112 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 168
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 169 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 223
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 224 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 267
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 268 SRPKFRELI 276

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 41  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 99
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 100 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 156
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 157 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 211
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 212 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 255
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 256 SRPKFRELI 264

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 54  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 112
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 113 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 169
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 170 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 225 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 268
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 269 SRPKFRELI 277

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 44  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 102
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 103 YVREHKDNIGSQYLLNWCVQIAEGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 159
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 160 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 214
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 215 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 258
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 259 SRPKFRELI 267

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 54  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 112
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 113 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 169
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 170 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 225 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 268
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 269 SRPKFRELI 277

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 35/223 (15%)
Query: 374 RETNSYIAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R   + +AVK + +  S   +++  SE  ++ ++ H ++++L G C +   LLL+ E+  
Sbjct: 50  RAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAK 109
Query: 433 NGSLDSHLFKENSL-----------------------LTWEFRYKIAQDLASGLLYLQEE 469
            GSL   L +   +                       LT       A  ++ G+ YL   
Sbjct: 110 YGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA-- 167
Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPEC 525
            E  +VHRD+ + NI++      KI DFGL+R V       K SQ  +    + +MA E 
Sbjct: 168 -EMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI---PVKWMAIES 223
Query: 526 ATTGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQ 567
                 + +SDV+SFG++  EI   G  P     P+   +LL+
Sbjct: 224 LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK 266

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 56  KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 115
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +P G + SHL +         R+  AQ +     YL       +++RD+K  N+++D   
Sbjct: 116 VPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQG 171
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 172 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 228 YPPFFADQP 236

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 28/193 (14%)
Query: 376 TNSYIAVKRVSQGSKQG-IKEYASEVKIISRL-RHRNLVQLLGWCHEKK-ELLLVYEFMP 432
           T   +AVK + +G+     +   SE+KI+  +  H N+V LLG C +    L+++ EF  
Sbjct: 58  TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 117
Query: 433 NGSLDSHL---------FKENSL----LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDI 479
            G+L ++L         +K   L    LT E     +  +A G+ +L     +  +HRD+
Sbjct: 118 FGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLAS---RKXIHRDL 174
Query: 480 KSSNIMLDSNFNAKIGDFGLARLVEH-----AKGSQTTVLAGTMGYMAPECATTGKASKE 534
            + NI+L      KI DFGLAR +        KG     L     +MAPE       + +
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK----WMAPETIFDRVYTIQ 230
Query: 535 SDVYSFGIVALEI 547
           SDV+SFG++  EI
Sbjct: 231 SDVWSFGVLLWEI 243

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 24/190 (12%)
Query: 376 TNSYIAVKRVSQGSKQG-IKEYASEVKIISRL-RHRNLVQLLGWCHEKK-ELLLVYEFMP 432
           T   +AVK + +G+     +   SE+KI+  +  H N+V LLG C +    L+++ EF  
Sbjct: 56  TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 433 NGSLDSHL-FKENSLLTWEFRYK----------IAQDLASGLLYLQEEWEQCVVHRDIKS 481
            G+L ++L  K N  + ++  YK           +  +A G+ +L     +  +HRD+ +
Sbjct: 116 FGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKXIHRDLAA 172
Query: 482 SNIMLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASKESDV 537
            NI+L      KI DFGLAR +    ++ +     +    + +MAPE       + +SDV
Sbjct: 173 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL---PLKWMAPETIFDRVYTIQSDV 229
Query: 538 YSFGIVALEI 547
           +SFG++  EI
Sbjct: 230 WSFGVLLWEI 239

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 399 EVKIISRLR-HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQ 457
           EV I+ ++  H N++QL           LV++ M  G L  +L ++ +L   E R KI +
Sbjct: 73  EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIMR 131
Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT 517
            L   +  L +     +VHRD+K  NI+LD + N K+ DFG +  ++   G +   + GT
Sbjct: 132 ALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD--PGEKLRSVCGT 186
Query: 518 MGYMAP---ECATTGKA---SKESDVYSFGIVALEIACGRKP 553
             Y+AP   EC+         KE D++S G++   +  G  P
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    L +L     +   L +V E+ 
Sbjct: 65  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYA 124
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+M+D    
Sbjct: 125 PGGEMFSHLRRIGRFXEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLMIDQQGY 180
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            K+ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 181 IKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 552 KPINPKAP 559
            P     P
Sbjct: 237 PPFFADQP 244

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS-LDSHLFKENSLLTWEFRYKIAQ 457
           E+ ++S+     + +  G   +  +L ++ E++  GS LD  L K   L    +   I +
Sbjct: 67  EITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALD--LLKPGPL-EETYIATILR 123
Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT 517
           ++  GL YL  E +   +HRDIK++N++L    + K+ DFG+A  +   +  +     GT
Sbjct: 124 EILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKRNXFVGT 179
Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             +MAPE         ++D++S GI A+E+A G  P
Sbjct: 180 PFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E++
Sbjct: 50  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 109
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ +     YL       +++RD+K  N+++D    
Sbjct: 110 PGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGY 165
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 166 IQVTDFGFAKRVK----GRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 221
Query: 552 KPINPKAP 559
            P     P
Sbjct: 222 PPFFADQP 229

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 64  KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 179
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 180 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 236 YPPFFADQP 244

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 28/194 (14%)
Query: 376 TNSYIAVKRVSQGSKQG-IKEYASEVKIISRL-RHRNLVQLLGWCHEKK-ELLLVYEFMP 432
           T   +AVK + +G+     +   SE+KI+  +  H N+V LLG C +    L+++ EF  
Sbjct: 58  TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 117
Query: 433 NGSLDSHL---------FKE------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
            G+L ++L         +KE         LT E     +  +A G+ +L     +C+ HR
Sbjct: 118 FGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCI-HR 174
Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASK 533
           D+ + NI+L      KI DFGLAR +    ++ +     +    + +MAPE       + 
Sbjct: 175 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL---PLKWMAPETIFDRVYTI 231
Query: 534 ESDVYSFGIVALEI 547
           +SDV+SFG++  EI
Sbjct: 232 QSDVWSFGVLLWEI 245

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 64  KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 179
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 180 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 236 YPPFFADQP 244

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E++
Sbjct: 64  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D    
Sbjct: 124 PGGEMFSHLRRIGRFXEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 180 IQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 552 KPINPKAP 559
            P     P
Sbjct: 236 PPFFADQP 243

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 64  KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 179
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 180 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 236 YPPFFADQP 244

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 398 SEVKIISRLR-HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIA 456
            EV I+ ++  H N++QL           LV++ M  G L  +L ++ +L   E R KI 
Sbjct: 59  KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIM 117
Query: 457 QDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG 516
           + L   +  L +     +VHRD+K  NI+LD + N K+ DFG +   +   G +   + G
Sbjct: 118 RALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLREVCG 172
Query: 517 TMGYMAP---ECATTGKA---SKESDVYSFGIVALEIACGRKP 553
           T  Y+AP   EC+         KE D++S G++   +  G  P
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 399 EVKIISRLR-HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQ 457
           EV I+ ++  H N++QL           LV++ M  G L  +L ++ +L   E R KI +
Sbjct: 73  EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIMR 131
Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT 517
            L   +  L +     +VHRD+K  NI+LD + N K+ DFG +  ++   G +   + GT
Sbjct: 132 ALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD--PGEKLREVCGT 186
Query: 518 MGYMAP---ECATTGKA---SKESDVYSFGIVALEIACGRKP 553
             Y+AP   EC+         KE D++S G++   +  G  P
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 84  KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 144 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 199
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 200 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 256 YPPFFADQP 264

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 398 SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQ 457
           +E  I+  ++H  +V L+       +L L+ E++  G L   L +E   +     + +A+
Sbjct: 70  AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE 129
Query: 458 -DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG 516
             +A G L+     ++ +++RD+K  NIML+   + K+ DFGL +   H  G+ T    G
Sbjct: 130 ISMALGHLH-----QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH-DGTVTHTFCG 183
Query: 517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           T+ YMAPE       ++  D +S G +  ++  G  P
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS 435
           T   +A+++++   +   +   +E+ ++   ++ N+V  L       EL +V E++  GS
Sbjct: 44  TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGS 103
Query: 436 LDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
           L + +  E  +   +    + ++    L +L       V+HRDIKS NI+L  + + K+ 
Sbjct: 104 L-TDVVTETCMDEGQIA-AVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLT 158
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           DFG    +   + S+ + + GT  +MAPE  T      + D++S GI+A+E+  G  P
Sbjct: 159 DFGFCAQITPEQ-SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E++
Sbjct: 64  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D    
Sbjct: 124 PGGEMFSHLRRIGRFXEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 180 IQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 552 KPINPKAP 559
            P     P
Sbjct: 236 PPFFADQP 243

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 120/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 57  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 115
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 116 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 172
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 173 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 227
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+   C   D +
Sbjct: 228 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIMRK-CWMIDAD 271
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 272 SRPKFRELI 280

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E++
Sbjct: 65  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 124
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D    
Sbjct: 125 PGGEMFSHLRRIGRFXEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQGY 180
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 181 IQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 552 KPINPKAP 559
            P     P
Sbjct: 237 PPFFADQP 244

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+ 
Sbjct: 64  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYA 123
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+M+D    
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLMIDQQGY 179
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 180 IQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 552 KPINPKAP 559
            P     P
Sbjct: 236 PPFFADQP 243

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 376 TNSYIAVK--RVSQGSKQGIKEYASEVKIISRLR---HRNLVQLLGWCHEKK-----ELL 425
           +  ++A+K  RV  G +        EV ++ RL    H N+V+L+  C   +     ++ 
Sbjct: 28  SGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVT 87
Query: 426 LVYEFMPNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           LV+E + +  L ++L K     L  E    + +    GL +L      C+VHRD+K  NI
Sbjct: 88  LVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENI 143
Query: 485 MLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVA 544
           ++ S    K+ DFGLAR+  +       V+  T+ Y APE       +   D++S G + 
Sbjct: 144 LVTSGGTVKLADFGLARIYSYQMALDPVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIF 201
Query: 545 LEIACGRKPI---NPKAPQGQVSLLQWVWDLYG 574
            E+   RKP+   N +A Q     L  ++DL G
Sbjct: 202 AEM-FRRKPLFCGNSEADQ-----LGKIFDLIG 228

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 30  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-- 87
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
            S+D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 88  -SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIK 146
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       +    +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 147 LADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 376 TNSYIAVK--RVSQGSKQGIKEYASEVKIISRLR---HRNLVQLLGWCHEKK-----ELL 425
           +  ++A+K  RV  G +        EV ++ RL    H N+V+L+  C   +     ++ 
Sbjct: 28  SGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVT 87
Query: 426 LVYEFMPNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           LV+E + +  L ++L K     L  E    + +    GL +L      C+VHRD+K  NI
Sbjct: 88  LVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENI 143
Query: 485 MLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVA 544
           ++ S    K+ DFGLAR+  +       V+  T+ Y APE       +   D++S G + 
Sbjct: 144 LVTSGGTVKLADFGLARIYSYQMALAPVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIF 201
Query: 545 LEIACGRKPI---NPKAPQGQVSLLQWVWDLYG 574
            E+   RKP+   N +A Q     L  ++DL G
Sbjct: 202 AEM-FRRKPLFCGNSEADQ-----LGKIFDLIG 228

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 120/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 50  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 108
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 109 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 165
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 166 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+   C   D +
Sbjct: 221 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIMRK-CWMIDAD 264
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 265 SRPKFRELI 273

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 35/223 (15%)
Query: 374 RETNSYIAVKRVSQ-GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R   + +AVK + +  S   +++  SE  ++ ++ H ++++L G C +   LLL+ E+  
Sbjct: 50  RAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAK 109
Query: 433 NGSLDSHLFKENSL-----------------------LTWEFRYKIAQDLASGLLYLQEE 469
            GSL   L +   +                       LT       A  ++ G+ YL   
Sbjct: 110 YGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA-- 167
Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPEC 525
            E  +VHRD+ + NI++      KI DFGL+R V       K SQ  +    + +MA E 
Sbjct: 168 -EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI---PVKWMAIES 223
Query: 526 ATTGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQ 567
                 + +SDV+SFG++  EI   G  P     P+   +LL+
Sbjct: 224 LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK 266

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS 435
           T   +A+++++   +   +   +E+ ++   ++ N+V  L       EL +V E++  GS
Sbjct: 44  TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGS 103
Query: 436 LDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
           L + +  E  +   +    + ++    L +L       V+HRDIKS NI+L  + + K+ 
Sbjct: 104 L-TDVVTETCMDEGQIA-AVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLT 158
Query: 496 DFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           DFG    +  E +K S+   + GT  +MAPE  T      + D++S GI+A+E+  G  P
Sbjct: 159 DFGFCAQITPEQSKRSE---MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 398 SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQ 457
           +E  I+  ++H  +V L+       +L L+ E++  G L   L +E   +     + +A+
Sbjct: 70  AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE 129
Query: 458 -DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG 516
             +A G L+     ++ +++RD+K  NIML+   + K+ DFGL +   H  G+ T    G
Sbjct: 130 ISMALGHLH-----QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH-DGTVTHXFCG 183
Query: 517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           T+ YMAPE       ++  D +S G +  ++  G  P
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS 435
           T   +A+++++   +   +   +E+ ++   ++ N+V  L       EL +V E++  GS
Sbjct: 45  TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGS 104
Query: 436 LDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
           L + +  E  +   +    + ++    L +L       V+HRDIKS NI+L  + + K+ 
Sbjct: 105 L-TDVVTETCMDEGQIA-AVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLT 159
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           DFG    +   + S+ + + GT  +MAPE  T      + D++S GI+A+E+  G  P
Sbjct: 160 DFGFCAQITPEQ-SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +ET ++ A+K + +     +K+     +E +I   +    LV+L     +   L +V E+
Sbjct: 64  KETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEY 123
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
            P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 124 APGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 179
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             K+ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 180 YIKVADFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 236 YPPFFADQP 244

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E++
Sbjct: 65  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 124
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D    
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQGY 180
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 181 IQVTDFGFAKRVK----GRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 552 KPINPKAP 559
            P     P
Sbjct: 237 PPFFADQP 244

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    L +L     +   L +V E+ 
Sbjct: 65  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYA 124
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+M+D    
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLMIDQQGY 180
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            K+ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 181 IKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 552 KPINPKAP 559
            P     P
Sbjct: 237 PPFFADQP 244

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 376 TNSYIAVKRVSQGSKQG-IKEYASEVKIISRL-RHRNLVQLLGWCHEKK-ELLLVYEFMP 432
           T   +AVK + +G+     +   SE+KI+  +  H N+V LLG C +    L+++ EF  
Sbjct: 57  TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 116
Query: 433 NGSLDSHL-FKENSLLTWEFRYKIAQDLASGLLYLQE---------------EWEQCVVH 476
            G+L ++L  K N  +     YK  +DL    L L+                   +C+ H
Sbjct: 117 FGNLSTYLRSKRNEFVP----YKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI-H 171
Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEH-----AKGSQTTVLAGTMGYMAPECATTGKA 531
           RD+ + NI+L      KI DFGLAR +        KG     L     +MAPE       
Sbjct: 172 RDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK----WMAPETIFDRVY 227
Query: 532 SKESDVYSFGIVALEI 547
           + +SDV+SFG++  EI
Sbjct: 228 TIQSDVWSFGVLLWEI 243

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    L +L     +   L +V E+ 
Sbjct: 65  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYA 124
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+M+D    
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLMIDQQGY 180
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            K+ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 181 IKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 552 KPINPKAP 559
            P     P
Sbjct: 237 PPFFADQP 244

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 55  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 115 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 168
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H           T  Y APE     K  +K  D++S G +  E+   
Sbjct: 169 ICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
Query: 551 RKPINP 556
           R PI P
Sbjct: 229 R-PIFP 233

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+ R RH N++ +          + K++ +V + M  
Sbjct: 56  VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 115
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 116 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 169
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H           T  Y APE     K  +K  D++S G +  E+   
Sbjct: 170 ICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 229
Query: 551 RKPINP 556
           R PI P
Sbjct: 230 R-PIFP 234

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 28  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-- 85
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
            S+D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 86  -SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIK 144
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       +    +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 145 LADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 14/159 (8%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS----LDSHLFKENSLLTWEFRYK 454
           E+ ++S+     + +  G   +  +L ++ E++  GS    L+     E  + T      
Sbjct: 70  EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ 123
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           I +++  GL YL  E +   +HRDIK++N++L  +   K+ DFG+A  +   +  +    
Sbjct: 124 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNXF 179
Query: 515 AGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
            GT  +MAPE         ++D++S GI A+E+A G  P
Sbjct: 180 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 30  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-- 87
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
            S+D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 88  -SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 146
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       +    +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 147 LADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K     +   ++E +  E   + +  H ++V+L+G   E   + ++ E    G L S
Sbjct: 41  VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 99
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L      L        A  L++ L YL+ +     VHRDI + N+++ +    K+GDFG
Sbjct: 100 FLQVRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFG 156
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           L+R +E +   + +     + +MAPE     + +  SDV+ FG+   EI   G KP
Sbjct: 157 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 28  RVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 88  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 143
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 551 RKP 553
             P
Sbjct: 204 ELP 206

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 20/191 (10%)
Query: 374 RETNSYIAVKRVSQ-GSKQGIKEYASEVKIISRLRHRN---LVQLLGWCHEKKELLLVYE 429
           R+T   IAVK++ + G+K+  K    ++ ++  L+  +   +VQ  G      ++ +  E
Sbjct: 47  RKTGHVIAVKQMRRSGNKEENKRILMDLDVV--LKSHDCPYIVQCFGTFITNTDVFIAME 104
Query: 430 FMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS 488
            M  G+    L K     +      K+   +   L YL+E+    V+HRD+K SNI+LD 
Sbjct: 105 LM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDE 160
Query: 489 NFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMAPECATTGKASK-----ESDVYSFGI 542
               K+ DFG++ RLV+     ++   AG   YMAPE       +K      +DV+S GI
Sbjct: 161 RGQIKLCDFGISGRLVDDKAKDRS---AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGI 217
Query: 543 VALEIACGRKP 553
             +E+A G+ P
Sbjct: 218 SLVELATGQFP 228

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 14/159 (8%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS----LDSHLFKENSLLTWEFRYK 454
           E+ ++S+     + +  G   +  +L ++ E++  GS    L+     E  + T      
Sbjct: 55  EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ 108
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           I +++  GL YL  E +   +HRDIK++N++L  +   K+ DFG+A  +   +  +    
Sbjct: 109 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNXF 164
Query: 515 AGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
            GT  +MAPE         ++D++S GI A+E+A G  P
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E++
Sbjct: 64  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D    
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 180 IQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 552 KPINPKAP 559
            P     P
Sbjct: 236 PPFFADQP 243

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E++
Sbjct: 64  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D    
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 180 IQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 552 KPINPKAP 559
            P     P
Sbjct: 236 PPFFADQP 243

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E++
Sbjct: 65  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 124
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D    
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQGY 180
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 181 IQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 236
Query: 552 KPINPKAP 559
            P     P
Sbjct: 237 PPFFADQP 244

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E++
Sbjct: 64  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
           P G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D    
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 180 IQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 552 KPINPKAP 559
            P     P
Sbjct: 236 PPFFADQP 243

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 24/163 (14%)
Query: 406 LRHRNLVQLLGWCHEKK----ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS 461
           LRH N++  +   ++      +L LV ++  +GSL  +L +    +T E   K+A   AS
Sbjct: 93  LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTAS 150
Query: 462 GLLYLQEEW-----EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA- 515
           GL +L  E      +  + HRD+KS NI++  N    I D GLA  V H   + T  +A 
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAP 208
Query: 516 ----GTMGYMAPECATTG------KASKESDVYSFGIVALEIA 548
               GT  YMAPE           ++ K +D+Y+ G+V  EIA
Sbjct: 209 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 29  RVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 89  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 144
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 551 RKP 553
             P
Sbjct: 205 ELP 207

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 118/249 (47%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 47  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 105
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 106 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 162
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
           LA+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 163 LAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C   D   I R       C   D +
Sbjct: 218 KPYD-GIPASEIS------SILEKGERLP--QPPIC-TIDVYMIMRK------CWMIDAD 261
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 262 SRPKFRELI 270

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 28  RVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 88  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 143
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 551 RKP 553
             P
Sbjct: 204 ELP 206

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 29  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-- 86
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
            S+D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 87  -SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 145
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       +    +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 146 LADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 34  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 93
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 94  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 150
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       + T  +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 151 LADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
           H  LV L      +  L  V E++  G L  H+ ++  L     R+  A+ ++  L YL 
Sbjct: 69  HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE-ISLALNYLH 127
Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECA 526
           E   + +++RD+K  N++LDS  + K+ D+G+ +  E  + G  T+   GT  Y+APE  
Sbjct: 128 E---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEIL 182
Query: 527 TTGKASKESDVYSFGIVALEIACGRKPIN 555
                    D ++ G++  E+  GR P +
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 211

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K     +   ++E +  E   + +  H ++V+L+G   E   + ++ E    G L S
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRS 479
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            L      L        A  L++ L YL+ +     VHRDI + N+++ +    K+GDFG
Sbjct: 480 FLQVRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFG 536
Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP 553
           L+R +E +   + +     + +MAPE     + +  SDV+ FG+   EI   G KP
Sbjct: 537 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E++I+ R RH N++ +            +++ +V + M  
Sbjct: 71  VAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET 130
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN+++++  + K
Sbjct: 131 DLYK--LLKSQQLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLINTTCDLK 184
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   EH      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 185 ICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
Query: 551 RKPINP 556
           R PI P
Sbjct: 245 R-PIFP 249

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 30/195 (15%)
Query: 376 TNSYIAVKRVSQGSKQG-IKEYASEVKIISRL-RHRNLVQLLGWCHEKK-ELLLVYEFMP 432
           T   +AVK + +G+     +   SE+KI+  +  H N+V LLG C +    L+++ EF  
Sbjct: 56  TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 433 NGSLDSHLFKENS---------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
            G+L ++L  + +                LT E     +  +A G+ +L     +C+ HR
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCI-HR 172
Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEH-----AKGSQTTVLAGTMGYMAPECATTGKAS 532
           D+ + NI+L      KI DFGLAR +        KG     L     +MAPE       +
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK----WMAPETIFDRVYT 228
Query: 533 KESDVYSFGIVALEI 547
            +SDV+SFG++  EI
Sbjct: 229 IQSDVWSFGVLLWEI 243

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 81/183 (44%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I + L H N+V+  G   E     L  E+  
Sbjct: 29  RVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 89  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 144
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 551 RKP 553
             P
Sbjct: 205 ELP 207

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 24/163 (14%)
Query: 406 LRHRNLVQLLGWCHEKK----ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS 461
           LRH N++  +   ++      +L LV ++  +GSL  +L +    +T E   K+A   AS
Sbjct: 80  LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTAS 137
Query: 462 GLLYLQEEW-----EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA- 515
           GL +L  E      +  + HRD+KS NI++  N    I D GLA  V H   + T  +A 
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAP 195
Query: 516 ----GTMGYMAPECATTG------KASKESDVYSFGIVALEIA 548
               GT  YMAPE           ++ K +D+Y+ G+V  EIA
Sbjct: 196 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 28/194 (14%)
Query: 376 TNSYIAVKRVSQGSKQG-IKEYASEVKIISRL-RHRNLVQLLGWCHEKK-ELLLVYEFMP 432
           T   +AVK + +G+     +   SE+KI+  +  H N+V LLG C +    L+++ EF  
Sbjct: 56  TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 433 NGSLDSHLFKENS---------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
            G+L ++L  + +                LT E     +  +A G+ +L     +C+ HR
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCI-HR 172
Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASK 533
           D+ + NI+L      KI DFGLAR +    ++ +     +    + +MAPE       + 
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL---PLKWMAPETIFDRVYTI 229
Query: 534 ESDVYSFGIVALEI 547
           +SDV+SFG++  EI
Sbjct: 230 QSDVWSFGVLLWEI 243

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
           H  LV L      +  L  V E++  G L  H+ ++  L     R+  A+ ++  L YL 
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE-ISLALNYLH 170
Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECA 526
           E   + +++RD+K  N++LDS  + K+ D+G+ +  E  + G  T+   GT  Y+APE  
Sbjct: 171 E---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEIL 225
Query: 527 TTGKASKESDVYSFGIVALEIACGRKPIN 555
                    D ++ G++  E+  GR P +
Sbjct: 226 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 254

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+   RH N++ +          + K++ +V + M  
Sbjct: 53  VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 113 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 166
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 167 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
Query: 551 RKPINP 556
           R PI P
Sbjct: 227 R-PIFP 231

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
           H  LV L      +  L  V E++  G L  H+ ++  L     R+  A+ ++  L YL 
Sbjct: 65  HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE-ISLALNYLH 123
Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECA 526
           E   + +++RD+K  N++LDS  + K+ D+G+ +  E  + G  T+   GT  Y+APE  
Sbjct: 124 E---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEIL 178
Query: 527 TTGKASKESDVYSFGIVALEIACGRKPIN 555
                    D ++ G++  E+  GR P +
Sbjct: 179 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 207

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 120/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 49  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLD 107
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 108 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 164
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
            A+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 165 RAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 220 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 263
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 264 SRPKFRELI 272

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 27  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 87  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 143
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       + T  +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 144 LADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 30/195 (15%)
Query: 376 TNSYIAVKRVSQGSKQG-IKEYASEVKIISRL-RHRNLVQLLGWCHEKK-ELLLVYEFMP 432
           T   +AVK + +G+     +   SE+KI+  +  H N+V LLG C +    L+++ EF  
Sbjct: 47  TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 106
Query: 433 NGSLDSHLFKENS---------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
            G+L ++L  + +                LT E     +  +A G+ +L     +C+ HR
Sbjct: 107 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCI-HR 163
Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEH-----AKGSQTTVLAGTMGYMAPECATTGKAS 532
           D+ + NI+L      KI DFGLAR +        KG     L     +MAPE       +
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK----WMAPETIFDRVYT 219
Query: 533 KESDVYSFGIVALEI 547
            +SDV+SFG++  EI
Sbjct: 220 IQSDVWSFGVLLWEI 234

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 31  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 90
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 91  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 147
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       + T  +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 148 LADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 28  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 88  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 143
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 551 RKP 553
             P
Sbjct: 204 ELP 206

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS 435
           T   +A+++++   +   +   +E+ ++   ++ N+V  L       EL +V E++  GS
Sbjct: 45  TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGS 104
Query: 436 LDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
           L + +  E  +   +    + ++    L +L       V+HR+IKS NI+L  + + K+ 
Sbjct: 105 L-TDVVTETCMDEGQIA-AVCRECLQALEFLHSNQ---VIHRNIKSDNILLGMDGSVKLT 159
Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           DFG    +   +  ++T + GT  +MAPE  T      + D++S GI+A+E+  G  P
Sbjct: 160 DFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 34  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 93
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 94  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 150
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       + T  +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 151 LADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 376 TNSYIAVK--RVSQGSKQGIKEYASEVKIISRLR---HRNLVQLLGWCHEKK-----ELL 425
           +  ++A+K  RV  G +        EV ++ RL    H N+V+L+  C   +     ++ 
Sbjct: 28  SGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVT 87
Query: 426 LVYEFMPNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           LV+E + +  L ++L K     L  E    + +    GL +L      C+VHRD+K  NI
Sbjct: 88  LVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENI 143
Query: 485 MLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVA 544
           ++ S    K+ DFGLAR+  +       V+  T+ Y APE       +   D++S G + 
Sbjct: 144 LVTSGGTVKLADFGLARIYSYQMALFPVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIF 201
Query: 545 LEIACGRKPI---NPKAPQGQVSLLQWVWDLYG 574
            E+   RKP+   N +A Q     L  ++DL G
Sbjct: 202 AEM-FRRKPLFCGNSEADQ-----LGKIFDLIG 228

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 28  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 88  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 143
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 551 RKP 553
             P
Sbjct: 204 ELP 206

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 29  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 89  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 144
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 551 RKP 553
             P
Sbjct: 205 ELP 207

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 120/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 51  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLD 109
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 110 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 166
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
            A+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 167 RAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 221
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 222 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 265
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 266 SRPKFRELI 274

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 13/224 (5%)
Query: 338 GPKRFPYKELALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVSQ---GSKQGIK 394
           GP  F     A+ ++ +   + L             + T    AVK +S+     K   +
Sbjct: 18  GPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE 77
Query: 395 EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK 454
               EV+++ +L H N+++L  +  +K    LV E    G L   +         +   +
Sbjct: 78  SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD-AAR 136
Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQT 511
           I + + SG+ Y+ +     +VHRD+K  N++L+S   + N +I DFGL+   E +K  + 
Sbjct: 137 IIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 193
Query: 512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPIN 555
            +  GT  Y+APE    G   ++ DV+S G++   +  G  P N
Sbjct: 194 KI--GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 234

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 28  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 88  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 143
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 551 RKP 553
             P
Sbjct: 204 ELP 206

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 29  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 89  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 144
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 551 RKP 553
             P
Sbjct: 205 ELP 207

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 16/186 (8%)
Query: 380 IAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQL-----LGWCHEKKELLLVYEFMPN 433
           +A+K++S    Q   +    E+KI+   RH N++ +          + K++ +V + M  
Sbjct: 53  VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                 L K   L      Y + Q L  GL Y+       V+HRD+K SN++L++  + K
Sbjct: 113 DLYK--LLKTQHLSNDHICYFLYQIL-RGLKYIHS---ANVLHRDLKPSNLLLNTTSDLK 166
Query: 494 IGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
           I DFGLAR+   +H      T    T  Y APE     K  +K  D++S G +  E+   
Sbjct: 167 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
Query: 551 RKPINP 556
           R PI P
Sbjct: 227 R-PIFP 231

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 24/163 (14%)
Query: 406 LRHRNLVQLLGWCHEKK----ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS 461
           LRH N++  +   ++      +L LV ++  +GSL  +L +    +T E   K+A   AS
Sbjct: 55  LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTAS 112
Query: 462 GLLYLQEEW-----EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA- 515
           GL +L  E      +  + HRD+KS NI++  N    I D GLA  V H   + T  +A 
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAP 170
Query: 516 ----GTMGYMAPECATTG------KASKESDVYSFGIVALEIA 548
               GT  YMAPE           ++ K +D+Y+ G+V  EIA
Sbjct: 171 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 24/163 (14%)
Query: 406 LRHRNLVQLLGWCHEKK----ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS 461
           LRH N++  +   ++      +L LV ++  +GSL  +L +    +T E   K+A   AS
Sbjct: 54  LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTAS 111
Query: 462 GLLYLQEEW-----EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA- 515
           GL +L  E      +  + HRD+KS NI++  N    I D GLA  V H   + T  +A 
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAP 169
Query: 516 ----GTMGYMAPECATTG------KASKESDVYSFGIVALEIA 548
               GT  YMAPE           ++ K +D+Y+ G+V  EIA
Sbjct: 170 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 28/194 (14%)
Query: 376 TNSYIAVKRVSQGSKQG-IKEYASEVKIISRL-RHRNLVQLLGWCHEKK-ELLLVYEFMP 432
           T   +AVK + +G+     +   SE+KI+  +  H N+V LLG C +    L+++ EF  
Sbjct: 93  TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 152
Query: 433 NGSLDSHLFKENS---------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
            G+L ++L  + +                LT E     +  +A G+ +L     +C+ HR
Sbjct: 153 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCI-HR 209
Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASK 533
           D+ + NI+L      KI DFGLAR +    ++ +     +    + +MAPE       + 
Sbjct: 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL---PLKWMAPETIFDRVYTI 266
Query: 534 ESDVYSFGIVALEI 547
           +SDV+SFG++  EI
Sbjct: 267 QSDVWSFGVLLWEI 280

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 29  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 89  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 144
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 551 RKP 553
             P
Sbjct: 205 ELP 207

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 27  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 87  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIK 143
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       + T  +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 144 LADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 32/239 (13%)
Query: 389 SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLT 448
           S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  ++ +    + 
Sbjct: 91  SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIG 149
Query: 449 WEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE---- 504
            ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFGLA+L+     
Sbjct: 150 SQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 206
Query: 505 --HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQG 561
             HA+G +  +      +MA E       + +SDV+S+G+   E+   G KP +   P  
Sbjct: 207 EYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPAS 260
Query: 562 QVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
           ++S       +   G+ L    P +C       I+  MI+ + C   D + RP  R++I
Sbjct: 261 EIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDADSRPKFRELI 304

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 28  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 88  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 143
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 551 RKP 553
             P
Sbjct: 204 ELP 206

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 28  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 88  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 143
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 551 RKP 553
             P
Sbjct: 204 ELP 206

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 24/163 (14%)
Query: 406 LRHRNLVQLLGWCHEKK----ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS 461
           LRH N++  +   ++      +L LV ++  +GSL  +L +    +T E   K+A   AS
Sbjct: 57  LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTAS 114
Query: 462 GLLYLQEE-----WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA- 515
           GL +L  E      +  + HRD+KS NI++  N    I D GLA  V H   + T  +A 
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAP 172
Query: 516 ----GTMGYMAPECATTG------KASKESDVYSFGIVALEIA 548
               GT  YMAPE           ++ K +D+Y+ G+V  EIA
Sbjct: 173 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 22/191 (11%)
Query: 376 TNSYIAVKRVSQGSKQG-IKEYASEVKIISRL-RHRNLVQLLGWCHEKK-ELLLVYEFMP 432
           T   +AVK + +G+     +   SE+KI+  +  H N+V LLG C +    L+++ EF  
Sbjct: 56  TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 433 NGSLDSHLFKENS---------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
            G+L ++L  + +                LT E     +  +A G+ +L     +C+ HR
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCI-HR 172
Query: 478 DIKSSNIMLDSNFNAKIGDFGLAR-LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           D+ + NI+L      KI DFGLAR + +     +       + +MAPE       + +SD
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSD 232
Query: 537 VYSFGIVALEI 547
           V+SFG++  EI
Sbjct: 233 VWSFGVLLWEI 243

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 27  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 86
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 87  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 142
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 143 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 202
Query: 551 RKP 553
             P
Sbjct: 203 ELP 205

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           + +K + +  +   + +     ++S+L H++LV   G C    E +LV EF+  GSLD++
Sbjct: 43  VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTY 102
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
           L K  + +   ++ ++A+ LA+ + +L+   E  ++H ++ + NI+L    + K G+   
Sbjct: 103 LKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPF 159
Query: 500 ARLVEHAKGSQTTVLAG-----TMGYMAPECATTGK-ASKESDVYSFGIVALEIAC-GRK 552
            +L +   G   TVL        + ++ PEC    K  +  +D +SFG    EI   G K
Sbjct: 160 IKLSD--PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDK 217
Query: 553 PIN 555
           P++
Sbjct: 218 PLS 220

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 28  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 88  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 143
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 551 RKP 553
             P
Sbjct: 204 ELP 206

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 28  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 88  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 143
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 551 RKP 553
             P
Sbjct: 204 ELP 206

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 120/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 47  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 105
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 106 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 162
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
            A+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 163 RAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 218 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 261
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 262 SRPKFRELI 270

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 24/163 (14%)
Query: 406 LRHRNLVQLLGWCHEKK----ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS 461
           LRH N++  +   ++      +L LV ++  +GSL  +L +    +T E   K+A   AS
Sbjct: 60  LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTAS 117
Query: 462 GLLYLQEEW-----EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA- 515
           GL +L  E      +  + HRD+KS NI++  N    I D GLA  V H   + T  +A 
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAP 175
Query: 516 ----GTMGYMAPECATTG------KASKESDVYSFGIVALEIA 548
               GT  YMAPE           ++ K +D+Y+ G+V  EIA
Sbjct: 176 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 30/195 (15%)
Query: 376 TNSYIAVKRVSQGSKQG-IKEYASEVKIISRL-RHRNLVQLLGWCHEKK-ELLLVYEFMP 432
           T   +AVK + +G+     +   SE+KI+  +  H N+V LLG C +    L+++ EF  
Sbjct: 47  TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCK 106
Query: 433 NGSLDSHLFKENS---------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
            G+L ++L  + +                LT E     +  +A G+ +L     +C+ HR
Sbjct: 107 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCI-HR 163
Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEH-----AKGSQTTVLAGTMGYMAPECATTGKAS 532
           D+ + NI+L      KI DFGLAR +        KG     L     +MAPE       +
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK----WMAPETIFDRVYT 219
Query: 533 KESDVYSFGIVALEI 547
            +SDV+SFG++  EI
Sbjct: 220 IQSDVWSFGVLLWEI 234

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 29  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 89  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 144
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 551 RKP 553
             P
Sbjct: 205 ELP 207

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 29  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 89  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 144
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 551 RKP 553
             P
Sbjct: 205 ELP 207

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 29  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 89  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 144
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 551 RKP 553
             P
Sbjct: 205 ELP 207

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 28  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 88  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 143
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 551 RKP 553
             P
Sbjct: 204 ELP 206

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 27  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 87  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 143
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       + T  +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 144 LADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 27  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 87  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 143
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       + T  +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 144 LADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 26  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 86  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 142
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       + T  +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 143 LADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 28  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 88  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 144
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       + T  +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 145 LADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
           H  LV L      +  L  V E++  G L  H+ ++  L     R+  A+ ++  L YL 
Sbjct: 80  HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE-ISLALNYLH 138
Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECA 526
           E   + +++RD+K  N++LDS  + K+ D+G+ +  E  + G  T+   GT  Y+APE  
Sbjct: 139 E---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEIL 193
Query: 527 TTGKASKESDVYSFGIVALEIACGRKPIN 555
                    D ++ G++  E+  GR P +
Sbjct: 194 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 222

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 26  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 86  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 142
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       + T  +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 143 LADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 28  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 88  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 143
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 551 RKP 553
             P
Sbjct: 204 ELP 206

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 374 RETNSYIAVKRVSQGSKQGIKE-YASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           R T   +AVK V         E    E+ I   L H N+V+  G   E     L  E+  
Sbjct: 28  RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
            G L   +  +  +   + + +    L +G++YL       + HRDIK  N++LD   N 
Sbjct: 88  GGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNL 143
Query: 493 KIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
           KI DFGLA +  +    +    + GT+ Y+APE     +   E  DV+S GIV   +  G
Sbjct: 144 KISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
Query: 551 RKP 553
             P
Sbjct: 204 ELP 206

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 17/169 (10%)
Query: 393 IKEYASEVKIISRLRHRNLVQLLGWCHEKKE--LLLVYEFMPNGS-LDSHLFKENSLLTW 449
           I++   E+ I+ +L H N+V+L+    +  E  L +V+E +  G  ++    K  S    
Sbjct: 80  IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 450 EFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS 509
            F +   QDL  G+ YL     Q ++HRDIK SN+++  + + KI DFG++      KGS
Sbjct: 140 RFYF---QDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSN---EFKGS 190
Query: 510 QTTV--LAGTMGYMAPECATTGK---ASKESDVYSFGIVALEIACGRKP 553
              +    GT  +MAPE  +  +   + K  DV++ G+       G+ P
Sbjct: 191 DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 28/194 (14%)
Query: 376 TNSYIAVKRVSQGSKQG-IKEYASEVKIISRL-RHRNLVQLLGWCHEKK-ELLLVYEFMP 432
           T   +AVK + +G+     +   SE+KI+  +  H N+V LLG C +    L+++ EF  
Sbjct: 47  TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCK 106
Query: 433 NGSLDSHLFKENS---------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
            G+L ++L  + +                LT E     +  +A G+ +L     +C+ HR
Sbjct: 107 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCI-HR 163
Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASK 533
           D+ + NI+L      KI DFGLAR +    ++ +     +    + +MAPE       + 
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL---PLKWMAPETIFDRVYTI 220
Query: 534 ESDVYSFGIVALEI 547
           +SDV+SFG++  EI
Sbjct: 221 QSDVWSFGVLLWEI 234

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 120/249 (48%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 54  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 112
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 113 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 169
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
            A+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 170 RAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+ + C   D +
Sbjct: 225 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIM-VKCWMIDAD 268
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 269 SRPKFRELI 277

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 28/194 (14%)
Query: 376 TNSYIAVKRVSQGSKQG-IKEYASEVKIISRL-RHRNLVQLLGWCHEKK-ELLLVYEFMP 432
           T   +AVK + +G+     +   SE+KI+  +  H N+V LLG C +    L+++ EF  
Sbjct: 47  TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCK 106
Query: 433 NGSLDSHLFKENS---------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
            G+L ++L  + +                LT E     +  +A G+ +L     +C+ HR
Sbjct: 107 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--KCI-HR 163
Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLV----EHAKGSQTTVLAGTMGYMAPECATTGKASK 533
           D+ + NI+L      KI DFGLAR +    ++ +     +    + +MAPE       + 
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL---PLKWMAPETIFDRVYTI 220
Query: 534 ESDVYSFGIVALEI 547
           +SDV+SFG++  EI
Sbjct: 221 QSDVWSFGVLLWEI 234

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 92/183 (50%), Gaps = 12/183 (6%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           + +K + +  +   + +     ++S+L H++LV   G C    E +LV EF+  GSLD++
Sbjct: 43  VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTY 102
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
           L K  + +   ++ ++A+ LA  + +L+   E  ++H ++ + NI+L    + K G+   
Sbjct: 103 LKKNKNCINILWKLEVAKQLAWAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPF 159
Query: 500 ARLVEHAKGSQTTVLAG-----TMGYMAPECATTGK-ASKESDVYSFGIVALEIAC-GRK 552
            +L +   G   TVL        + ++ PEC    K  +  +D +SFG    EI   G K
Sbjct: 160 IKLSD--PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDK 217
Query: 553 PIN 555
           P++
Sbjct: 218 PLS 220

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 14/186 (7%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNG 434
           T++ +A+K +    ++G    A  EV ++  L+H N+V L    H +K L LV+E++ + 
Sbjct: 26  TDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DK 84
Query: 435 SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKI 494
            L  +L    +++           L  GL Y      Q V+HRD+K  N++++     K+
Sbjct: 85  DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKL 141
Query: 495 GDFGLARLVEHAKGSQTTVL---AGTMGYMAPECAT-TGKASKESDVYSFGIVALEIACG 550
            DFGLAR    AK   T        T+ Y  P+    +   S + D++  G +  E+A G
Sbjct: 142 ADFGLAR----AKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATG 197
Query: 551 RKPINP 556
           R P+ P
Sbjct: 198 R-PLFP 202

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 119/249 (47%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 49  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLD 107
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 108 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 164
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
            A+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 165 RAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+   C   D +
Sbjct: 220 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIMRK-CWMIDAD 263
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 264 SRPKFRELI 272

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 37/195 (18%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSL- 436
           +AVK +   +    +E   SE+K++S L  H N+V LLG C      L++ E+   G L 
Sbjct: 79  VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 437 -------DSHLFKENS-------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
                  DS +  + S                  F Y++A+    G+ +L  +   C+ H
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK----GMAFLASK--NCI-H 191
Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT----MGYMAPECATTGKAS 532
           RD+ + NI+L      KI DFGLAR   H K     V+ G     + +MAPE       +
Sbjct: 192 RDLAARNILLTHGRITKICDFGLAR---HIKNDSNYVVKGNARLPVKWMAPESIFNCVYT 248
Query: 533 KESDVYSFGIVALEI 547
            ESDV+S+GI   E+
Sbjct: 249 FESDVWSYGIFLWEL 263

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 98/239 (41%), Gaps = 44/239 (18%)
Query: 391 QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWE 450
           + + ++  EV  +  L HRNL++L G       + +V E  P GSL   L K        
Sbjct: 57  EAMDDFIREVNAMHSLDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG 115
Query: 451 FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR--------- 501
              + A  +A G+ YL+    +  +HRD+ + N++L +    KIGDFGL R         
Sbjct: 116 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 172
Query: 502 -LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAP 559
            + EH K            + APE   T   S  SD + FG+   E+   G++P      
Sbjct: 173 VMQEHRKVP--------FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP------ 218
Query: 560 QGQVSLLQWVWDLYGNGKLLEAVDP---RLCRDFDGQQIERLMIVGLWCAHPDENLRPS 615
                     W      ++L  +D    RL R  D  Q    ++V  W   P++  RP+
Sbjct: 219 ----------WIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPED--RPT 265

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 376 TNSYIAVK--RVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK-----ELLLVY 428
           T+  +AVK  ++   S++ I+E+ SE   +    H N+++LLG C E       + +++ 
Sbjct: 61  TSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVIL 120
Query: 429 EFMPNGSLDSHLFKEN-----SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSN 483
            FM  G L ++L           +  +   K   D+A G+ YL     +  +HRD+ + N
Sbjct: 121 PFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARN 177
Query: 484 IMLDSNFNAKIGDFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGI 542
            ML  +    + DFGL++ +       Q  +    + ++A E       + +SDV++FG+
Sbjct: 178 CMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGV 237
Query: 543 VALEIA 548
              EIA
Sbjct: 238 TMWEIA 243

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 23/167 (13%)
Query: 374 RETNSYIAVKRV-SQGSKQGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKE-------- 423
           R+T   +A+K+V  +  K+G    A  E+KI+  L+H N+V L+  C  K          
Sbjct: 40  RKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGS 99
Query: 424 LLLVYEFMPN---GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIK 480
           + LV++F  +   G L + L K     T     ++ Q L +GL Y+       ++HRD+K
Sbjct: 100 IYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMK 152
Query: 481 SSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG---TMGYMAPE 524
           ++N+++  +   K+ DFGLAR    AK SQ         T+ Y  PE
Sbjct: 153 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           EV ++  L H N+++L  +  +K+   LV E    G L   +         +    I Q 
Sbjct: 86  EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQV 145
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN---AKIGDFGLARLVEHAKGSQTTVLA 515
           L SG+ YL +     +VHRD+K  N++L+S       KI DFGL+ + E+ K  +  +  
Sbjct: 146 L-SGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL-- 199
Query: 516 GTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQ 560
           GT  Y+APE     K  ++ DV+S G++   +  G  P   +  Q
Sbjct: 200 GTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQ 243

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 119/249 (47%), Gaps = 33/249 (13%)
Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +A+K + +  S +  KE   E  +++ + + ++ +LLG C     + L+ + MP G L  
Sbjct: 49  VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLD 107
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
           ++ +    +  ++       +A G+ YL++   + +VHRD+ + N+++ +  + KI DFG
Sbjct: 108 YVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFG 164
Query: 499 LARLVE------HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR 551
            A+L+       HA+G +  +      +MA E       + +SDV+S+G+   E+   G 
Sbjct: 165 RAKLLGAEEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           KP +   P  ++S       +   G+ L    P +C       I+  MI+   C   D +
Sbjct: 220 KPYD-GIPASEIS------SILEKGERLP--QPPIC------TIDVYMIMRK-CWMIDAD 263
Query: 612 LRPSIRQVI 620
            RP  R++I
Sbjct: 264 SRPKFRELI 272

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  LAGT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 376 TNSYIAVKRVSQ---GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           T    AVK +S+     K   +    EV+++ +L H N+++L  +  +K    LV E   
Sbjct: 50  TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 109
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            G L   +         +   +I + + SG+ Y+ +     +VHRD+K  N++L+S   +
Sbjct: 110 GGELFDEIISRKRFSEVD-AARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKD 165
Query: 490 FNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
            N +I DFGL+   E +K  +  +  GT  Y+APE    G   ++ DV+S G++   +  
Sbjct: 166 ANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLS 222
Query: 550 GRKPIN 555
           G  P N
Sbjct: 223 GCPPFN 228

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 23/167 (13%)
Query: 374 RETNSYIAVKRV-SQGSKQGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKE-------- 423
           R+T   +A+K+V  +  K+G    A  E+KI+  L+H N+V L+  C  K          
Sbjct: 40  RKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKAS 99
Query: 424 LLLVYEFMPN---GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIK 480
           + LV++F  +   G L + L K     T     ++ Q L +GL Y+       ++HRD+K
Sbjct: 100 IYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGLYYIHR---NKILHRDMK 152
Query: 481 SSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG---TMGYMAPE 524
           ++N+++  +   K+ DFGLAR    AK SQ         T+ Y  PE
Sbjct: 153 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199

>pdb|1H9P|A Chain A, Crystal Structure Of Dioclea Guianensis Seed Lectin Length = 237

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP++ H+GIDI                 G+   A ISYNS    L
Sbjct: 4   IVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQT--GKVGTAHISYNSVAKRL 61
Query: 207 S--VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S  V++TG  +  V      Y VDL   LPE+V  G S  TG+     +I SW F S L+
Sbjct: 62  SAVVSYTGSSSTTV-----SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTSKLK 116
Query: 265 MD 266
            +
Sbjct: 117 TN 118

>pdb|3RRD|A Chain A, Native Structure Of Dioclea Virgata Lectin Length = 237

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP++ H+GIDI                 G+   A ISYNS    L
Sbjct: 4   IVAVELDSYPNTDIGDPSYPHIGIDIKSVRSKSTARWNMQT--GKVGTAHISYNSVAKRL 61
Query: 207 S--VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S  V++TG  +  V      Y VDL   LPE+V  G S  TG+     +I SW F S L+
Sbjct: 62  SAVVSYTGSSSTTV-----SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTSKLK 116
Query: 265 MD 266
            +
Sbjct: 117 TN 118

>pdb|1H9W|A Chain A, Native Dioclea Guianensis Seed Lectin Length = 237

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP++ H+GIDI                 G+   A ISYNS    L
Sbjct: 4   IVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQT--GKVGTAHISYNSVAKRL 61
Query: 207 S--VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S  V++TG  +  V      Y VDL   LPE+V  G S  TG+     +I SW F S L+
Sbjct: 62  SAVVSYTGSSSTTV-----SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTSKLK 116
Query: 265 MD 266
            +
Sbjct: 117 TN 118

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 23/167 (13%)
Query: 374 RETNSYIAVKRV-SQGSKQGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKE-------- 423
           R+T   +A+K+V  +  K+G    A  E+KI+  L+H N+V L+  C  K          
Sbjct: 40  RKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGS 99
Query: 424 LLLVYEFMPN---GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIK 480
           + LV++F  +   G L + L K     T     ++ Q L +GL Y+       ++HRD+K
Sbjct: 100 IYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGLYYIHR---NKILHRDMK 152
Query: 481 SSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG---TMGYMAPE 524
           ++N+++  +   K+ DFGLAR    AK SQ         T+ Y  PE
Sbjct: 153 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 30  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 90  ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 146
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       +    +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 147 LADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 376 TNSYIAVKRVSQ---GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           T    AVK +S+     K   +    EV+++ +L H N+++L  +  +K    LV E   
Sbjct: 73  TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 132
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            G L   +         +   +I + + SG+ Y+ +     +VHRD+K  N++L+S   +
Sbjct: 133 GGELFDEIISRKRFSEVD-AARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKD 188
Query: 490 FNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
            N +I DFGL+   E +K  +  +  GT  Y+APE    G   ++ DV+S G++   +  
Sbjct: 189 ANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLS 245
Query: 550 GRKPIN 555
           G  P N
Sbjct: 246 GCPPFN 251

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 391 QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWE 450
           + + ++  EV  +  L HRNL++L G       + +V E  P GSL   L K        
Sbjct: 63  EAMDDFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLG 121
Query: 451 FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV----EHA 506
              + A  +A G+ YL+    +  +HRD+ + N++L +    KIGDFGL R +    +H 
Sbjct: 122 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX 178
Query: 507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKP 553
              +   +     + APE   T   S  SD + FG+   E+   G++P
Sbjct: 179 VMQEHRKVP--FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 21/166 (12%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK-----ENSLLTWEFRY 453
           E+ I+  L+H N+V+L    H KK L+LV+E      LD  L K     E  L +   + 
Sbjct: 50  EISILKELKHSNIVKLYDVIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKS 104
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL--VEHAKGSQT 511
            + Q L +G+ Y  +   + V+HRD+K  N++++     KI DFGLAR   +   K +  
Sbjct: 105 FLLQ-LLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 512 TVLAGTMGYMAPECAT-TGKASKESDVYSFGIVALEIACGRKPINP 556
            V   T+ Y AP+    + K S   D++S G +  E+  G  P+ P
Sbjct: 161 VV---TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG-APLFP 202

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 23/167 (13%)
Query: 374 RETNSYIAVKRV-SQGSKQGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKE-------- 423
           R+T   +A+K+V  +  K+G    A  E+KI+  L+H N+V L+  C  K          
Sbjct: 39  RKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGS 98
Query: 424 LLLVYEFMPN---GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIK 480
           + LV++F  +   G L + L K     T     ++ Q L +GL Y+       ++HRD+K
Sbjct: 99  IYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGLYYIHR---NKILHRDMK 151
Query: 481 SSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG---TMGYMAPE 524
           ++N+++  +   K+ DFGLAR    AK SQ         T+ Y  PE
Sbjct: 152 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 198

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 391 QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWE 450
           + + ++  EV  +  L HRNL++L G       + +V E  P GSL   L K        
Sbjct: 53  EAMDDFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLG 111
Query: 451 FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV----EHA 506
              + A  +A G+ YL+    +  +HRD+ + N++L +    KIGDFGL R +    +H 
Sbjct: 112 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX 168
Query: 507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKP 553
              +   +     + APE   T   S  SD + FG+   E+   G++P
Sbjct: 169 VMQEHRKVP--FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 98/239 (41%), Gaps = 44/239 (18%)
Query: 391 QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWE 450
           + + ++  EV  +  L HRNL++L G       + +V E  P GSL   L K        
Sbjct: 53  EAMDDFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLG 111
Query: 451 FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR--------- 501
              + A  +A G+ YL+    +  +HRD+ + N++L +    KIGDFGL R         
Sbjct: 112 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 168
Query: 502 -LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAP 559
            + EH K            + APE   T   S  SD + FG+   E+   G++P      
Sbjct: 169 VMQEHRKVP--------FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP------ 214
Query: 560 QGQVSLLQWVWDLYGNGKLLEAVDP---RLCRDFDGQQIERLMIVGLWCAHPDENLRPS 615
                     W      ++L  +D    RL R  D  Q    ++V  W   P++  RP+
Sbjct: 215 ----------WIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPED--RPT 261

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 21/166 (12%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK-----ENSLLTWEFRY 453
           E+ I+  L+H N+V+L    H KK L+LV+E      LD  L K     E  L +   + 
Sbjct: 50  EISILKELKHSNIVKLYDVIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKS 104
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL--VEHAKGSQT 511
            + Q L +G+ Y  +   + V+HRD+K  N++++     KI DFGLAR   +   K +  
Sbjct: 105 FLLQ-LLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 512 TVLAGTMGYMAPECAT-TGKASKESDVYSFGIVALEIACGRKPINP 556
            V   T+ Y AP+    + K S   D++S G +  E+  G  P+ P
Sbjct: 161 VV---TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG-TPLFP 202

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 98/239 (41%), Gaps = 44/239 (18%)
Query: 391 QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWE 450
           + + ++  EV  +  L HRNL++L G       + +V E  P GSL   L K        
Sbjct: 63  EAMDDFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLG 121
Query: 451 FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR--------- 501
              + A  +A G+ YL+    +  +HRD+ + N++L +    KIGDFGL R         
Sbjct: 122 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 178
Query: 502 -LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAP 559
            + EH K            + APE   T   S  SD + FG+   E+   G++P      
Sbjct: 179 VMQEHRKVP--------FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP------ 224
Query: 560 QGQVSLLQWVWDLYGNGKLLEAVDP---RLCRDFDGQQIERLMIVGLWCAHPDENLRPS 615
                     W      ++L  +D    RL R  D  Q    ++V  W   P++  RP+
Sbjct: 225 ----------WIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPED--RPT 271

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 24/188 (12%)
Query: 399 EVKIISRLR---HRNLVQLLGWCHEKK-----ELLLVYEFMPNGSLDSHLFKENSL-LTW 449
           EV ++ RL    H N+V+L+  C   +     ++ LV+E + +  L ++L K     L  
Sbjct: 61  EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPA 119
Query: 450 EFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS 509
           E    + +    GL +L      C+VHRD+K  NI++ S    K+ DFGLAR+  +    
Sbjct: 120 ETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL 176
Query: 510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPI---NPKAPQGQVSLL 566
              V+  T+ Y APE       +   D++S G +  E+   RKP+   N +A Q     L
Sbjct: 177 TPVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQ-----L 228
Query: 567 QWVWDLYG 574
             ++DL G
Sbjct: 229 GKIFDLIG 236

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 12/189 (6%)
Query: 374 RETNSYIAVKRVSQGSKQG--IKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           R T    AVK +++ S +         EV+++ +L H N+++L     +     +V E  
Sbjct: 44  RITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELY 103
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS--- 488
             G L   + K       +   +I + + SG+ Y+ +     +VHRD+K  NI+L+S   
Sbjct: 104 TGGELFDEIIKRKRFSEHD-AARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEK 159
Query: 489 NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
           + + KI DFGL+   +     +  +  GT  Y+APE    G   ++ DV+S G++   + 
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILL 216
Query: 549 CGRKPINPK 557
            G  P   K
Sbjct: 217 SGTPPFYGK 225

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 376 TNSYIAVKRVSQ---GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           T    AVK +S+     K   +    EV+++ +L H N+++L  +  +K    LV E   
Sbjct: 74  TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 133
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            G L   +         +   +I + + SG+ Y+ +     +VHRD+K  N++L+S   +
Sbjct: 134 GGELFDEIISRKRFSEVD-AARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKD 189
Query: 490 FNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
            N +I DFGL+   E +K  +  +  GT  Y+APE    G   ++ DV+S G++   +  
Sbjct: 190 ANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLS 246
Query: 550 GRKPIN 555
           G  P N
Sbjct: 247 GCPPFN 252

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 12/189 (6%)
Query: 374 RETNSYIAVKRVSQGSKQG--IKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           R T    AVK +++ S +         EV+++ +L H N+++L     +     +V E  
Sbjct: 44  RITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELY 103
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS--- 488
             G L   + K       +   +I + + SG+ Y+ +     +VHRD+K  NI+L+S   
Sbjct: 104 TGGELFDEIIKRKRFSEHD-AARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEK 159
Query: 489 NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
           + + KI DFGL+   +     +  +  GT  Y+APE    G   ++ DV+S G++   + 
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILL 216
Query: 549 CGRKPINPK 557
            G  P   K
Sbjct: 217 SGTPPFYGK 225

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 17/164 (10%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK-----ENSLLTWEFRY 453
           E+ I+  L+H N+V+L    H KK L+LV+E      LD  L K     E  L +   + 
Sbjct: 50  EISILKELKHSNIVKLYDVIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKS 104
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
            + Q L +G+ Y  +   + V+HRD+K  N++++     KI DFGLAR         T  
Sbjct: 105 FLLQ-LLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 514 LAGTMGYMAPECAT-TGKASKESDVYSFGIVALEIACGRKPINP 556
           +  T+ Y AP+    + K S   D++S G +  E+  G  P+ P
Sbjct: 161 IV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG-TPLFP 202

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 12/189 (6%)
Query: 374 RETNSYIAVKRVSQGSKQG--IKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           R T    AVK +++ S +         EV+++ +L H N+++L     +     +V E  
Sbjct: 44  RITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELY 103
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS--- 488
             G L   + K       +   +I + + SG+ Y+ +     +VHRD+K  NI+L+S   
Sbjct: 104 TGGELFDEIIKRKRFSEHD-AARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEK 159
Query: 489 NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
           + + KI DFGL+   +     +  +  GT  Y+APE    G   ++ DV+S G++   + 
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILL 216
Query: 549 CGRKPINPK 557
            G  P   K
Sbjct: 217 SGTPPFYGK 225

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 98/239 (41%), Gaps = 44/239 (18%)
Query: 391 QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWE 450
           + + ++  EV  +  L HRNL++L G       + +V E  P GSL   L K        
Sbjct: 57  EAMDDFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLG 115
Query: 451 FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR--------- 501
              + A  +A G+ YL+    +  +HRD+ + N++L +    KIGDFGL R         
Sbjct: 116 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 172
Query: 502 -LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAP 559
            + EH K            + APE   T   S  SD + FG+   E+   G++P      
Sbjct: 173 VMQEHRKVP--------FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP------ 218
Query: 560 QGQVSLLQWVWDLYGNGKLLEAVDP---RLCRDFDGQQIERLMIVGLWCAHPDENLRPS 615
                     W      ++L  +D    RL R  D  Q    ++V  W   P++  RP+
Sbjct: 219 ----------WIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPED--RPT 265

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 23/174 (13%)
Query: 391 QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWE 450
           + + ++  EV  +  L HRNL++L G       + +V E  P GSL   L K        
Sbjct: 53  EAMDDFIREVNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLG 111
Query: 451 FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR--------- 501
              + A  +A G+ YL+    +  +HRD+ + N++L +    KIGDFGL R         
Sbjct: 112 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 168
Query: 502 -LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKP 553
            + EH K            + APE   T   S  SD + FG+   E+   G++P
Sbjct: 169 VMQEHRKVP--------FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 31  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 90
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 91  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 147
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       +    +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 148 LADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 29  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 89  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 145
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       +    +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 146 LADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 29  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 89  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIK 145
Query: 494 IGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECATTGK-ASKESDVYSFGIVALEIAC 549
           + DFGLAR    A G           T+ Y APE     K  S   D++S G +  E+  
Sbjct: 146 LADFGLAR----AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
Query: 550 GR 551
            R
Sbjct: 202 RR 203

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 30  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 90  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 146
Query: 494 IGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECATTGK-ASKESDVYSFGIVALEIAC 549
           + DFGLAR    A G           T+ Y APE     K  S   D++S G +  E+  
Sbjct: 147 LADFGLAR----AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 550 GR 551
            R
Sbjct: 203 RR 204

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 29  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 89  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 145
Query: 494 IGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECATTGK-ASKESDVYSFGIVALEIAC 549
           + DFGLAR    A G           T+ Y APE     K  S   D++S G +  E+  
Sbjct: 146 LADFGLAR----AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
Query: 550 GR 551
            R
Sbjct: 202 RR 203

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 27  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 87  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 143
Query: 494 IGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECATTGK-ASKESDVYSFGIVALEIAC 549
           + DFGLAR    A G           T+ Y APE     K  S   D++S G +  E+  
Sbjct: 144 LADFGLAR----AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 550 GR 551
            R
Sbjct: 200 RR 201

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 30  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 90  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 146
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       +    +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 147 LADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 26  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 86  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 142
Query: 494 IGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECATTGK-ASKESDVYSFGIVALEIAC 549
           + DFGLAR    A G           T+ Y APE     K  S   D++S G +  E+  
Sbjct: 143 LADFGLAR----AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 550 GR 551
            R
Sbjct: 199 RR 200

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 84/173 (48%), Gaps = 10/173 (5%)
Query: 398 SEVKIISRLRHRNLVQLLGWCHEKK-ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIA 456
           +E +++  +R    +  L +  + + +L L+ +++  G L +HL +       E +  + 
Sbjct: 107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG 166
Query: 457 QDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG 516
           + +    L L+   +  +++RDIK  NI+LDSN +  + DFGL++     +  +     G
Sbjct: 167 EIV----LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCG 222
Query: 517 TMGYMAPECATTGKAS--KESDVYSFGIVALEIACGRKPIN---PKAPQGQVS 564
           T+ YMAP+    G +   K  D +S G++  E+  G  P      K  Q ++S
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS 275

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 28  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 88  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIK 144
Query: 494 IGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECATTGK-ASKESDVYSFGIVALEIAC 549
           + DFGLAR    A G           T+ Y APE     K  S   D++S G +  E+  
Sbjct: 145 LADFGLAR----AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 550 GR 551
            R
Sbjct: 201 RR 202

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 27  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 87  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 143
Query: 494 IGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECATTGK-ASKESDVYSFGIVALEIAC 549
           + DFGLAR    A G           T+ Y APE     K  S   D++S G +  E+  
Sbjct: 144 LADFGLAR----AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 550 GR 551
            R
Sbjct: 200 RR 201

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 27  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 87  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 143
Query: 494 IGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECATTGK-ASKESDVYSFGIVALEIAC 549
           + DFGLAR    A G           T+ Y APE     K  S   D++S G +  E+  
Sbjct: 144 LADFGLAR----AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 550 GR 551
            R
Sbjct: 200 RR 201

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 28  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 88  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 144
Query: 494 IGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECATTGK-ASKESDVYSFGIVALEIAC 549
           + DFGLAR    A G           T+ Y APE     K  S   D++S G +  E+  
Sbjct: 145 LADFGLAR----AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 550 GR 551
            R
Sbjct: 201 RR 202

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 27  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 87  DLKD---FMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIK 143
Query: 494 IGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECATTGK-ASKESDVYSFGIVALEIAC 549
           + DFGLAR    A G           T+ Y APE     K  S   D++S G +  E+  
Sbjct: 144 LADFGLAR----AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 550 GR 551
            R
Sbjct: 200 RR 201

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 9/158 (5%)
Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           +VQL     + K L +V E+MP G L + +   +    W   Y      A  +L L    
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYT-----AEVVLALDAIH 191
Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT-- 528
              ++HRD+K  N++LD + + K+ DFG    ++           GT  Y++PE   +  
Sbjct: 192 SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQG 251
Query: 529 --GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVS 564
             G   +E D +S G+   E+  G  P    +  G  S
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYS 289

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
Query: 444 NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RL 502
           + ++  E   KI       L +L+E  +  ++HRDIK SNI+LD + N K+ DFG++ +L
Sbjct: 119 DDVIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQL 176
Query: 503 VEHAKGSQTTVLAGTMGYMAPE----CATTGKASKESDVYSFGIVALEIACGRKP 553
           V+    ++    AG   YMAPE     A+       SDV+S GI   E+A GR P
Sbjct: 177 VDSIAKTRD---AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 24/163 (14%)
Query: 406 LRHRNLVQLLGWCHEKK----ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS 461
           LRH N++  +      +    +L L+  +  +GSL  + F +   L      ++A   A 
Sbjct: 59  LRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSL--YDFLQRQTLEPHLALRLAVSAAC 116
Query: 462 GLLYLQEEW-----EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA- 515
           GL +L  E      +  + HRD KS N+++ SN    I D GLA  V H++GS    +  
Sbjct: 117 GLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA--VMHSQGSDYLDIGN 174
Query: 516 ----GTMGYMAPEC------ATTGKASKESDVYSFGIVALEIA 548
               GT  YMAPE           ++ K +D+++FG+V  EIA
Sbjct: 175 NPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA 217

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 26  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 86  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 142
Query: 494 IGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECATTGK-ASKESDVYSFGIVALEIAC 549
           + DFGLAR    A G           T+ Y APE     K  S   D++S G +  E+  
Sbjct: 143 LADFGLAR----AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 550 GR 551
            R
Sbjct: 199 RR 200

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           EV ++ +L H N+++L  +  +K+   LV E    G L   +         +    I + 
Sbjct: 71  EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-IMKQ 129
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN---AKIGDFGLARLVEHAKGSQTTVLA 515
           + SG  YL +     +VHRD+K  N++L+S       KI DFGL+   E   G +     
Sbjct: 130 VLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE--VGGKMKERL 184
Query: 516 GTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQ 560
           GT  Y+APE     K  ++ DV+S G++   + CG  P   +  Q
Sbjct: 185 GTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQ 228

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+ ++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 27  TGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 87  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 143
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       + T  +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 144 LADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+ ++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 26  TGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 86  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 142
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       + T  +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 143 LADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 28  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 88  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 144
Query: 494 IGDFGLARLVEHAKGSQTTVLAG---TMGYMAPECATTGK-ASKESDVYSFGIVALEIAC 549
           + DFGLAR    A G           T+ Y APE     K  S   D++S G +  E+  
Sbjct: 145 LADFGLAR----AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
Query: 550 GR 551
            R
Sbjct: 201 RR 202

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 58  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 117
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ +     YL       +++RD+K  N+++D   
Sbjct: 118 VAGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQG 173
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 174 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 230 YPPFFADQP 238

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 84  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 144 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 199
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+ A    T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 200 YIQVTDFGFAKRVKGA----TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 256 YPPFFADQP 264

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VAGGEMFSHLRRIGRFXEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VAGGEMFSHLRRIGRFXEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+EF+  
Sbjct: 27  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 87  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 143
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       +    +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 144 LADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VAGGEMFSHLRRIGRFXEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 8/178 (4%)
Query: 381 AVKRVSQGSK-QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL-LLVYEFMPNGSLDS 438
           A+K +S+ ++ Q ++ +  E  ++  L H N++ L+G     + L  ++  +M +G L  
Sbjct: 53  AIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQ 112
Query: 439 HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG 498
            +       T +        +A G+ YL E   Q  VHRD+ + N MLD +F  K+ DFG
Sbjct: 113 FIRSPQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFG 169
Query: 499 LARLV---EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           LAR +   E+    Q       + + A E   T + + +SDV+SFG++  E+     P
Sbjct: 170 LARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 10/183 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           +++N   AVK +S+  +   ++  + +K+     H N+V+L    H++    LV E +  
Sbjct: 33  KKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLHEVFHDQLHTFLVMELLNG 90
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML---DSNF 490
           G L   + K+      E  Y I + L S + ++ +     VVHRD+K  N++    + N 
Sbjct: 91  GELFERIKKKKHFSETEASY-IMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNL 146
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             KI DFG ARL +            T+ Y APE        +  D++S G++   +  G
Sbjct: 147 EIKIIDFGFARL-KPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSG 205
Query: 551 RKP 553
           + P
Sbjct: 206 QVP 208

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 50  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 109
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ +     YL       +++RD+K  N+++D   
Sbjct: 110 VAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDEQG 165
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 166 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 222 YPPFFADQP 230

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           EV ++ +L H N+++L  +  +K+   LV E    G L   +         +    I + 
Sbjct: 54  EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-IMKQ 112
Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN---AKIGDFGLARLVEHAKGSQTTVLA 515
           + SG  YL +     +VHRD+K  N++L+S       KI DFGL+   E   G +     
Sbjct: 113 VLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE--VGGKMKERL 167
Query: 516 GTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQ 560
           GT  Y+APE     K  ++ DV+S G++   + CG  P   +  Q
Sbjct: 168 GTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQ 211

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 84  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 144 VAGGEMFSHLRRIGRFXEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 199
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 200 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 256 YPPFFADQP 264

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VAGGEMFSHLRRIGRFAEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|2JDZ|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP++ H+GIDI                 G+   A ISYNS    L
Sbjct: 6   IVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQT--GKVGTAHISYNSVAKRL 63
Query: 207 S--VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S  V+++G  +  V      Y VDL   LPE+V  G S  TG+     +I SW F S L+
Sbjct: 64  SAVVSYSGTSSTTV-----SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTSKLK 118
Query: 265 MD 266
            +
Sbjct: 119 TN 120

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 11/188 (5%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           ET ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E++
Sbjct: 64  ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
             G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D    
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQGY 179
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
            ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G 
Sbjct: 180 IQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 552 KPINPKAP 559
            P     P
Sbjct: 236 PPFFADQP 243

>pdb|1QMO|E Chain E, Structure Of Fril, A Legume Lectin That Delays Hematopoietic Progenitor Maturation Length = 133

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 58/118 (49%), Gaps = 11/118 (9%)
Query: 150 VAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNLS 207
           VAVEFD Y+N    DP + H+GID+                 G+   A ISYNS +  LS
Sbjct: 4   VAVEFDTYLNPDYGDPNYIHIGIDVNSIRSKVTAKWDWQN--GKIATAHISYNSVSKRLS 61
Query: 208 VA--FTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSL 263
           V   + G +        L Y ++L   LPE+V  G S +TG D    +++SW F SSL
Sbjct: 62  VTSYYAGSK-----PATLSYDIELHTVLPEWVRVGLSASTGQDKERNTVHSWSFTSSL 114

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 13/186 (6%)
Query: 376 TNSYIAVKRVSQ---GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
           T    AVK +S+     K   +    EV+++ +L H N+ +L  +  +K    LV E   
Sbjct: 50  TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYT 109
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---N 489
            G L   +         +   +I + + SG+ Y  +     +VHRD+K  N++L+S   +
Sbjct: 110 GGELFDEIISRKRFSEVD-AARIIRQVLSGITYXHK---NKIVHRDLKPENLLLESKSKD 165
Query: 490 FNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
            N +I DFGL+   E +K  +  +  GT  Y+APE    G   ++ DV+S G++   +  
Sbjct: 166 ANIRIIDFGLSTHFEASKKXKDKI--GTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLS 222
Query: 550 GRKPIN 555
           G  P N
Sbjct: 223 GCPPFN 228

>pdb|2JE7|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin S131h Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP++ H+GIDI                 G+   A ISYNS    L
Sbjct: 6   IVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQT--GKVGTAHISYNSVAKRL 63
Query: 207 S--VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S  V+++G  +  V      Y VDL   LPE+V  G S  TG+     +I SW F S L+
Sbjct: 64  SAVVSYSGTSSTTV-----SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTSKLK 118
Query: 265 MD 266
            +
Sbjct: 119 TN 120

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 24/195 (12%)
Query: 375 ETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQL--------------LGWCHE 420
           + +  +A+K++     Q +K    E+KII RL H N+V++              +G   E
Sbjct: 34  DCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTE 93
Query: 421 KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIK 480
              + +V E+M      +++ ++  LL    R  + Q L  GL Y+       V+HRD+K
Sbjct: 94  LNSVYIVQEYMETDL--ANVLEQGPLLEEHARLFMYQ-LLRGLKYIH---SANVLHRDLK 147
Query: 481 SSNIMLDS-NFNAKIGDFGLARLVEHAKGSQTTVLAG--TMGYMAPECATT-GKASKESD 536
            +N+ +++ +   KIGDFGLAR+++     +  +  G  T  Y +P    +    +K  D
Sbjct: 148 PANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAID 207
Query: 537 VYSFGIVALEIACGR 551
           +++ G +  E+  G+
Sbjct: 208 MWAAGCIFAEMLTGK 222

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 64  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 124 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 179
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 180 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 236 YPPFFADQP 244

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+E +  
Sbjct: 26  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ 85
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 86  ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 142
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       + T  +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 143 LADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
           H   +L  + + M  G L  HL +       + R+  A ++  GL ++   +   VV+RD
Sbjct: 262 HTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF---VVYRD 317
Query: 479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DV 537
           +K +NI+LD + + +I D GLA      K   +    GT GYMAPE    G A   S D 
Sbjct: 318 LKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADW 374
Query: 538 YSFGIVALEIACGRKP 553
           +S G +  ++  G  P
Sbjct: 375 FSLGCMLFKLLRGHSP 390

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
           H   +L  + + M  G L  HL +       + R+  A ++  GL ++   +   VV+RD
Sbjct: 262 HTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF---VVYRD 317
Query: 479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DV 537
           +K +NI+LD + + +I D GLA      K   +    GT GYMAPE    G A   S D 
Sbjct: 318 LKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADW 374
Query: 538 YSFGIVALEIACGRKP 553
           +S G +  ++  G  P
Sbjct: 375 FSLGCMLFKLLRGHSP 390

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
           H   +L  + + M  G L  HL +       + R+  A ++  GL ++   +   VV+RD
Sbjct: 261 HTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF---VVYRD 316
Query: 479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DV 537
           +K +NI+LD + + +I D GLA      K   +    GT GYMAPE    G A   S D 
Sbjct: 317 LKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADW 373
Query: 538 YSFGIVALEIACGRKP 553
           +S G +  ++  G  P
Sbjct: 374 FSLGCMLFKLLRGHSP 389

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
           LL L     Q +VH D+K +NI L      K+GDFGL  LVE        V  G   YMA
Sbjct: 167 LLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMA 224
Query: 523 PECATTGKASKESDVYSFGIVALEIAC 549
           PE    G     +DV+S G+  LE+AC
Sbjct: 225 PEL-LQGSYGTAADVFSLGLTILEVAC 250

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADEP 243

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLIIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
           H   +L  + + M  G L  HL +       + R+  A ++  GL ++   +   VV+RD
Sbjct: 262 HTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF---VVYRD 317
Query: 479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DV 537
           +K +NI+LD + + +I D GLA      K   +    GT GYMAPE    G A   S D 
Sbjct: 318 LKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADW 374
Query: 538 YSFGIVALEIACGRKP 553
           +S G +  ++  G  P
Sbjct: 375 FSLGCMLFKLLRGHSP 390

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 398 SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQ 457
           +E+ I+++L H  L+ L     +K E++L+ EF+  G L   +  E+  ++        +
Sbjct: 97  NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR 156
Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN--FNAKIGDFGLARLVEHAKGSQTTVLA 515
               GL ++    E  +VH DIK  NIM ++    + KI DFGLA  +   +  + T   
Sbjct: 157 QACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT--T 211
Query: 516 GTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
            T  + APE          +D+++ G++   +  G  P
Sbjct: 212 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 37/195 (18%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSL- 436
           +AVK +   +    +E   SE+K++S L  H N+V LLG C      L++ E+   G L 
Sbjct: 56  VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 437 -------DSHLFKENS-------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
                  DS +  + S                  F Y++A+    G+ +L  +   C+ H
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK----GMAFLASK--NCI-H 168
Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT----MGYMAPECATTGKAS 532
           RD+ + NI+L      KI DFGLAR +   K     V+ G     + +MAPE       +
Sbjct: 169 RDLAARNILLTHGRITKICDFGLARDI---KNDSNYVVKGNARLPVKWMAPESIFNCVYT 225
Query: 533 KESDVYSFGIVALEI 547
            ESDV+S+GI   E+
Sbjct: 226 FESDVWSYGIFLWEL 240

>pdb|2ZBJ|A Chain A, Crystal Structure Of Dioclea Rostrata Lectin Length = 237

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP + H+GIDI                 G+     ISYNS    L
Sbjct: 4   IVAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTARWNMQT--GKVGTVHISYNSVAKRL 61
Query: 207 S--VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S  V++TG  +  V      Y VDL   LPE+V  G S  TG+     +I SW F S L+
Sbjct: 62  SAVVSYTGSSSTTV-----SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTSKLK 116
Query: 265 MD 266
            +
Sbjct: 117 TN 118

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 85/193 (44%), Gaps = 15/193 (7%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISR-LRHRNLVQLLGWCHEKKELLLVYEFMP 432
           ++ N  +AVK + +G K  I E      I  R LRH N+V+          L +V E+  
Sbjct: 41  KQANELVAVKYIERGEK--IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 98
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN--F 490
            G L   +         E R+   Q L SG+ Y        V HRD+K  N +LD +   
Sbjct: 99  GGELFERICNAGRFSEDEARF-FFQQLISGVSYAHA---MQVAHRDLKLENTLLDGSPAP 154
Query: 491 NAKIGDFGLARL-VEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIA 548
             KI DFG ++  V H   SQ     GT  Y+APE     +   K +DV+S G+    + 
Sbjct: 155 RLKIADFGYSKASVLH---SQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 549 CGRKPI-NPKAPQ 560
            G  P  +P+ P+
Sbjct: 212 VGAYPFEDPEEPK 224

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 35/210 (16%)
Query: 374 RETNSYIAVKRVS---QGSKQGIKEYASEVKIISRLR-HRNLVQLLGWCH--EKKELLLV 427
           R T   +AVK++    Q S    + +  E+ I++ L  H N+V LL        +++ LV
Sbjct: 31  RRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLLNVLRADNDRDVYLV 89
Query: 428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD 487
           +++M     D H     ++L    +  +   L   + YL       ++HRD+K SNI+L+
Sbjct: 90  FDYM---ETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLN 143
Query: 488 SNFNAKIGDFGLARLVEHAKGSQTTV--------------------LAGTMGYMAPECAT 527
           +  + K+ DFGL+R   + +     +                       T  Y APE   
Sbjct: 144 AECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILL 203
Query: 528 -TGKASKESDVYSFGIVALEIACGRKPINP 556
            + K +K  D++S G +  EI CG KPI P
Sbjct: 204 GSTKYTKGIDMWSLGCILGEILCG-KPIFP 232

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 37/195 (18%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSL- 436
           +AVK +   +    +E   SE+K++S L  H N+V LLG C      L++ E+   G L 
Sbjct: 79  VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 437 -------DSHLFKENS-------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
                  DS +  + S                  F Y++A+    G+ +L  +   C+ H
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK----GMAFLASK--NCI-H 191
Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT----MGYMAPECATTGKAS 532
           RD+ + NI+L      KI DFGLAR +   K     V+ G     + +MAPE       +
Sbjct: 192 RDLAARNILLTHGRITKICDFGLARDI---KNDSNYVVKGNARLPVKWMAPESIFNCVYT 248
Query: 533 KESDVYSFGIVALEI 547
            ESDV+S+GI   E+
Sbjct: 249 FESDVWSYGIFLWEL 263

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 37/195 (18%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSL- 436
           +AVK +   +    +E   SE+K++S L  H N+V LLG C      L++ E+   G L 
Sbjct: 74  VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Query: 437 -------DSHLFKENS-------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
                  DS +  + S                  F Y++A+    G+ +L  +   C+ H
Sbjct: 134 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK----GMAFLASK--NCI-H 186
Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT----MGYMAPECATTGKAS 532
           RD+ + NI+L      KI DFGLAR +   K     V+ G     + +MAPE       +
Sbjct: 187 RDLAARNILLTHGRITKICDFGLARDI---KNDSNYVVKGNARLPVKWMAPESIFNCVYT 243
Query: 533 KESDVYSFGIVALEI 547
            ESDV+S+GI   E+
Sbjct: 244 FESDVWSYGIFLWEL 258

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKXQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDXELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 37/195 (18%)
Query: 380 IAVKRVSQGSKQGIKE-YASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSL- 436
           +AVK +   +    +E   SE+K++S L  H N+V LLG C      L++ E+   G L 
Sbjct: 72  VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 131
Query: 437 -------DSHLFKENS-------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
                  DS +  + S                  F Y++A+    G+ +L  +   C+ H
Sbjct: 132 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK----GMAFLASK--NCI-H 184
Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT----MGYMAPECATTGKAS 532
           RD+ + NI+L      KI DFGLAR +   K     V+ G     + +MAPE       +
Sbjct: 185 RDLAARNILLTHGRITKICDFGLARDI---KNDSNYVVKGNARLPVKWMAPESIFNCVYT 241
Query: 533 KESDVYSFGIVALEI 547
            ESDV+S+GI   E+
Sbjct: 242 FESDVWSYGIFLWEL 256

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 422 KELLLVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIK 480
           K L +  EF   G+L+  + K     L      ++ + +  G+ Y+     + ++HRD+K
Sbjct: 107 KCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLK 163
Query: 481 SSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSF 540
            SNI L      KIGDFGL   +++    + T   GT+ YM+PE  ++    KE D+Y+ 
Sbjct: 164 PSNIFLVDTKQVKIGDFGLVTSLKN--DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYAL 221
Query: 541 GIVALEI 547
           G++  E+
Sbjct: 222 GLILAEL 228

>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L Length = 226

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 24/234 (10%)
Query: 36  TFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRE-TAGRATYNQSMRLWDKATGNLTDF 94
           TFN T+   Q D  ++ E     +N    +  N E + GRA Y+  +++ D+   NL  F
Sbjct: 10  TFNKTNLILQGDATVSSEGHLLLTN----VKGNEEDSMGRAFYSAPIQINDRTIDNLASF 65
Query: 95  TTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGG--GSFGLTKDNEPLNSSIPFVAV 152
           +T+F+F I+++N    A GLAF L P GS+ P  KG   G F  T  +   ++    VAV
Sbjct: 66  STNFTFRINAKNIENSAYGLAFALVPVGSR-PKLKGRYLGLFNTTNYDRDAHT----VAV 120
Query: 153 EFDVYVNSWDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNLSVAFTG 212
            FD   N        + ID+                 G + E  I+Y+S  ++L V+   
Sbjct: 121 VFDTVSN-------RIEIDVNSIRPIATESCNFGHNNGEKAEVRITYDSPKNDLRVSL-- 171
Query: 213 FRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD---FAIFSIYSWEFNSSL 263
              +      +   V L + + ++V+ GFS  +G         ++ SW F+S+ 
Sbjct: 172 LYPSSEEKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWSFSSNF 225

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 24/181 (13%)
Query: 383 KRVSQGSKQGIKEYASEVKIISRLRHRNLVQLL-GW---CHEKKELLLVYEFMPNGSLDS 438
           +++++  +Q  KE A  +K    L+H N+V+    W      KK ++LV E   +G+L +
Sbjct: 62  RKLTKSERQRFKEEAEXLK---GLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKT 118
Query: 439 HL-----FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-NFNA 492
           +L      K   L +W       + +  GL +L       ++HRD+K  NI +     + 
Sbjct: 119 YLKRFKVXKIKVLRSW------CRQILKGLQFLHTRTPP-IIHRDLKCDNIFITGPTGSV 171
Query: 493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRK 552
           KIGD GLA L    + S    + GT  + APE     K  +  DVY+FG   LE A    
Sbjct: 172 KIGDLGLATL---KRASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEY 227
Query: 553 P 553
           P
Sbjct: 228 P 228

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 83/175 (47%), Gaps = 23/175 (13%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEK--KELLLVYEFMPNGSLDSHLFKENS---LLTWEFRY 453
           E +++ +L H+N+V+L     E   +  +L+ EF P GSL + L + ++   L   EF  
Sbjct: 57  EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML----DSNFNAKIGDFGLARLVEHAKGS 509
            + +D+  G+ +L+E     +VHR+IK  NIM     D     K+ DFG AR +E  +  
Sbjct: 117 -VLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE-- 170
Query: 510 QTTVLAGTMGYMAPECATTGKASKES--------DVYSFGIVALEIACGRKPINP 556
           Q   L GT  Y+ P+        K+         D++S G+     A G  P  P
Sbjct: 171 QFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+APE   +   +K  D ++ G++  ++A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 20/188 (10%)
Query: 379 YIAVKRVS-QGSKQGIK-EYASEVKIISRLR---HRNLVQLLGWC-----HEKKELLLVY 428
           ++A+KRV  Q  ++G+      EV ++  L    H N+V+L   C       + +L LV+
Sbjct: 39  FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVF 98
Query: 429 EFMPNGSLDSHLFK--ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           E + +  L ++L K  E  + T   +  + Q L  GL +L       VVHRD+K  NI++
Sbjct: 99  EHV-DQDLTTYLDKVPEPGVPTETIKDMMFQ-LLRGLDFLHSHR---VVHRDLKPQNILV 153
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALE 546
            S+   K+ DFGLAR+        + V+  T+ Y APE       +   D++S G +  E
Sbjct: 154 TSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
Query: 547 IACGRKPI 554
           +   RKP+
Sbjct: 212 MF-RRKPL 218

>pdb|3A0K|A Chain A, Crystal Structure Of An Antiflamatory Legume Lectin From Cymbosema Roseum Seeds Length = 237

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP++ H+GIDI                 G+   A ISYNS    L
Sbjct: 4   IVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQT--GKVGTAHISYNSVAKRL 61
Query: 207 S--VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           +  V+++G  +  V      Y VDL   LPE+V  G S  TG+     +I SW F S L+
Sbjct: 62  TAVVSYSGSSSTTV-----SYDVDLTNVLPEWVRVGLSATTGLYKETNTILSWSFTSKLK 116
Query: 265 MD 266
            +
Sbjct: 117 TN 118

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 23/195 (11%)
Query: 374 RETNSYIAVKRVSQG---SKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY 428
           RET    AVK V      S  G+  ++   E  I   L+H ++V+LL        L +V+
Sbjct: 46  RETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVF 105
Query: 429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC----VVHRDIKSSNI 484
           EFM    L   + K      + +   +A      +L   E    C    ++HRD+K  N+
Sbjct: 106 EFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQIL---EALRYCHDNNIIHRDVKPENV 161
Query: 485 MLDSNFNA---KIGDFGLARLVEHAKGSQTTVLAGTMG---YMAPECATTGKASKESDVY 538
           +L S  N+   K+GDFG+A  +    G    V  G +G   +MAPE        K  DV+
Sbjct: 162 LLASKENSAPVKLGDFGVAIQL----GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVW 217
Query: 539 SFGIVALEIACGRKP 553
             G++   +  G  P
Sbjct: 218 GCGVILFILLSGCLP 232

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 84/192 (43%), Gaps = 13/192 (6%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISR-LRHRNLVQLLGWCHEKKELLLVYEFMP 432
           +++N  +AVK + +G K  I E      I  R LRH N+V+          L +V E+  
Sbjct: 40  KQSNELVAVKYIERGEK--IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 97
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN--F 490
            G L   +         E R+   Q L SG+ Y        V HRD+K  N +LD +   
Sbjct: 98  GGELFERICNAGRFSEDEARF-FFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAP 153
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIAC 549
             KI DFG ++       SQ     GT  Y+APE     +   K +DV+S G+    +  
Sbjct: 154 RLKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 211
Query: 550 GRKPI-NPKAPQ 560
           G  P  +P+ P+
Sbjct: 212 GAYPFEDPEEPK 223

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 23/175 (13%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEK--KELLLVYEFMPNGSLDSHLFKENS---LLTWEFRY 453
           E +++ +L H+N+V+L     E   +  +L+ EF P GSL + L + ++   L   EF  
Sbjct: 57  EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML----DSNFNAKIGDFGLARLVEHAKGS 509
            + +D+  G+ +L+E     +VHR+IK  NIM     D     K+ DFG AR +E     
Sbjct: 117 -VLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE--DDE 170
Query: 510 QTTVLAGTMGYMAPECATTGKASKES--------DVYSFGIVALEIACGRKPINP 556
           Q   L GT  Y+ P+        K+         D++S G+     A G  P  P
Sbjct: 171 QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNAMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           I  K++S    Q ++    E +I   L+H N+V+L     E+    L+++ +  G L   
Sbjct: 55  INTKKLSARDHQKLER---EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFED 111
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA---KIGD 496
           +         +  + I Q L + L   Q      VVHRD+K  N++L S       K+ D
Sbjct: 112 IVAREYYSEADASHCIQQILEAVLHCHQ----MGVVHRDLKPENLLLASKLKGAAVKLAD 167
Query: 497 FGLARLVEHAKGSQTT--VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  VE   G Q      AGT GY++PE        K  D+++ G++   +  G  P
Sbjct: 168 FGLAIEVE---GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKXQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 20/188 (10%)
Query: 379 YIAVKRVS-QGSKQGIK-EYASEVKIISRLR---HRNLVQLLGWC-----HEKKELLLVY 428
           ++A+KRV  Q  ++G+      EV ++  L    H N+V+L   C       + +L LV+
Sbjct: 39  FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVF 98
Query: 429 EFMPNGSLDSHLFK--ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           E + +  L ++L K  E  + T   +  + Q L  GL +L       VVHRD+K  NI++
Sbjct: 99  EHV-DQDLTTYLDKVPEPGVPTETIKDMMFQ-LLRGLDFLHSHR---VVHRDLKPQNILV 153
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALE 546
            S+   K+ DFGLAR+        + V+  T+ Y APE       +   D++S G +  E
Sbjct: 154 TSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
Query: 547 IACGRKPI 554
           +   RKP+
Sbjct: 212 M-FRRKPL 218

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 41  KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 100
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 101 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 154
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 155 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 546 EIACGR 551
           E+  GR
Sbjct: 211 ELLTGR 216

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 9/158 (5%)
Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           +VQL     + + L +V E+MP G L + +   +    W   Y      A  +L L    
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYT-----AEVVLALDAIH 185
Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT-- 528
               +HRD+K  N++LD + + K+ DFG    +      +     GT  Y++PE   +  
Sbjct: 186 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 529 --GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVS 564
             G   +E D +S G+   E+  G  P    +  G  S
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 283

>pdb|3U4X|A Chain A, Crystal Structure Of A Lectin From Camptosema Pedicellatum Seeds In Complex With 5-Bromo-4-Chloro-3-Indolyl-Alpha-D-Mannose Length = 236

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP + H+GI+I                 G+   A ISYNS    L
Sbjct: 4   IVAVELDTYPNTDIGDPNYQHIGINIKSIRSKATTRWNVQD--GKVGTAHISYNSVAKRL 61
Query: 207 S--VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S  V++ G  +  V      Y VDL   LPE+V  G S +TGV     +I SW F S L+
Sbjct: 62  SAIVSYPGGSSATV-----SYDVDLNNILPEWVRVGLSASTGVYKETNTILSWSFTSKLK 116
Query: 265 MD 266
            +
Sbjct: 117 TN 118

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 16/150 (10%)
Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS-----LDSHLFKENSLLTWEFRY 453
           E+ I+SR+ H N++++L     +    LV E   +G      +D H   +  L ++ FR 
Sbjct: 79  EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
            ++   A G L L++     ++HRDIK  NI++  +F  K+ DFG A  +E  K   T  
Sbjct: 139 LVS---AVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT-- 188
Query: 514 LAGTMGYMAPECATTGK-ASKESDVYSFGI 542
             GT+ Y APE          E +++S G+
Sbjct: 189 FCGTIEYCAPEVLMGNPYRGPELEMWSLGV 218

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 19/195 (9%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVK--IISR--LRHRNLVQLLGWCHEKKELLLVYE 429
           +++N  +AVK + +G K      A+ VK  II+   LRH N+V+          L +V E
Sbjct: 41  KQSNELVAVKYIERGEK-----IAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVME 95
Query: 430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN 489
           +   G L   +         E R+   Q L SG+ Y        V HRD+K  N +LD +
Sbjct: 96  YASGGELFERICNAGRFSEDEARF-FFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGS 151
Query: 490 --FNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALE 546
                KI DFG ++       SQ     GT  Y+APE     +   K +DV+S G+    
Sbjct: 152 PAPRLKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 209
Query: 547 IACGRKPI-NPKAPQ 560
           +  G  P  +P+ P+
Sbjct: 210 MLVGAYPFEDPEEPK 224

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 20/188 (10%)
Query: 379 YIAVKRVS-QGSKQGIK-EYASEVKIISRLR---HRNLVQLLGWC-----HEKKELLLVY 428
           ++A+KRV  Q  ++G+      EV ++  L    H N+V+L   C       + +L LV+
Sbjct: 39  FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVF 98
Query: 429 EFMPNGSLDSHLFK--ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           E + +  L ++L K  E  + T   +  + Q L  GL +L       VVHRD+K  NI++
Sbjct: 99  EHV-DQDLTTYLDKVPEPGVPTETIKDMMFQ-LLRGLDFLHSHR---VVHRDLKPQNILV 153
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALE 546
            S+   K+ DFGLAR+        + V+  T+ Y APE       +   D++S G +  E
Sbjct: 154 TSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
Query: 547 IACGRKPI 554
           +   RKP+
Sbjct: 212 MF-RRKPL 218

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 389 SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLT 448
           S +  ++   E +I  +L+H N+V+L     E+    LV++ +  G L   +        
Sbjct: 45  SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 104
Query: 449 WEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA---KIGDFGLARLVEH 505
            +  + I Q L S + Y        +VHR++K  N++L S       K+ DFGLA  V  
Sbjct: 105 ADASHCIQQILES-IAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160
Query: 506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           ++       AGT GY++PE       SK  D+++ G++   +  G  P
Sbjct: 161 SEAWHG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 55  KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 114
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 115 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 168
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 169 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 224
Query: 546 EIACGR 551
           E+  GR
Sbjct: 225 ELLTGR 230

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 9/158 (5%)
Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           +VQL     + + L +V E+MP G L + +   +    W   Y      A  +L L    
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYT-----AEVVLALDAIH 190
Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT-- 528
               +HRD+K  N++LD + + K+ DFG    +      +     GT  Y++PE   +  
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 529 --GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVS 564
             G   +E D +S G+   E+  G  P    +  G  S
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 9/158 (5%)
Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           +VQL     + + L +V E+MP G L + +   +    W   Y      A  +L L    
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYT-----AEVVLALDAIH 190
Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT-- 528
               +HRD+K  N++LD + + K+ DFG    +      +     GT  Y++PE   +  
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 529 --GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVS 564
             G   +E D +S G+   E+  G  P    +  G  S
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 64  KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 123
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 124 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 177
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 178 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 233
Query: 546 EIACGR 551
           E+  GR
Sbjct: 234 ELLTGR 239

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 50  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 109
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 110 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 163
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 164 NEDXELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 546 EIACGR 551
           E+  GR
Sbjct: 220 ELLTGR 225

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 65  KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 124
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 125 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 178
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 179 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 546 EIACGR 551
           E+  GR
Sbjct: 235 ELLTGR 240

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 7/179 (3%)
Query: 376 TNSYIAVKRVSQGSK-QGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           T   +A+K++   ++ +G+   A  E+ ++  L H N+V+LL   H + +L LV+E +  
Sbjct: 30  TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ 89
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
              D   F + S LT      I   L   L  L       V+HRD+K  N+++++    K
Sbjct: 90  ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 146
Query: 494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           + DFGLAR       +    +  T+ Y APE     K  S   D++S G +  E+   R
Sbjct: 147 LADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMTGXVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 50  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 109
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 110 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 163
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 164 NEDXELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 546 EIACGR 551
           E+  GR
Sbjct: 220 ELLTGR 225

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT  Y+AP    +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 56  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 115
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 116 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 169
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 170 NEDXELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 225
Query: 546 EIACGR 551
           E+  GR
Sbjct: 226 ELLTGR 231

>pdb|2JEC|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora Lectin Mutant E123a-H131n-K132q Complexed With 5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose Length = 239

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP + H+GIDI                 G+     ISYNS    L
Sbjct: 6   IVAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTARWNMQT--GKVGTVHISYNSVAKRL 63
Query: 207 S--VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S  V+++G  +  V      Y VDL   LPE+V  G S  TG+     +I SW F S L+
Sbjct: 64  SAVVSYSGSSSTTV-----SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTSKLK 118
Query: 265 MD 266
            +
Sbjct: 119 TN 120

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 41  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 100
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 101 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 154
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 155 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 546 EIACGR 551
           E+  GR
Sbjct: 211 ELLTGR 216

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 42  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 101
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 102 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 155
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 156 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 211
Query: 546 EIACGR 551
           E+  GR
Sbjct: 212 ELLTGR 217

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 47  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 106
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 107 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 160
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 161 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 546 EIACGR 551
           E+  GR
Sbjct: 217 ELLTGR 222

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 108/253 (42%), Gaps = 32/253 (12%)
Query: 385 VSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKEN 444
           + + ++  +K +  EV    + RH N+V  +G C     L ++       +L S +    
Sbjct: 65  IERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK 124
Query: 445 SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL----A 500
            +L      +IAQ++  G+ YL     + ++H+D+KS N+  D N    I DFGL     
Sbjct: 125 IVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180
Query: 501 RLVEHAKGSQTTVLAGTMGYMAPECATTGKA---------SKESDVYSFGIVALEIACGR 551
            L    +  +  +  G + ++APE                SK SDV++ G +  E+    
Sbjct: 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHARE 240
Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
            P   +  +        +W + G G     + P L +   G++I  ++   L+C   ++ 
Sbjct: 241 WPFKTQPAEAI------IWQM-GTG-----MKPNLSQIGMGKEISDIL---LFCWAFEQE 285
Query: 612 LRPSIRQVIHVLN 624
            RP+  +++ +L 
Sbjct: 286 ERPTFTKLMDMLE 298

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 389 SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLT 448
           S +  ++   E +I  +L+H N+V+L     E+    LV++ +  G L   +        
Sbjct: 44  SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 103
Query: 449 WEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA---KIGDFGLARLVEH 505
            +  + I Q L S + Y        +VHR++K  N++L S       K+ DFGLA  V  
Sbjct: 104 ADASHCIQQILES-IAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 159
Query: 506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           ++       AGT GY++PE       SK  D+++ G++   +  G  P
Sbjct: 160 SEAWHG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205

>pdb|2GDF|A Chain A, Crystal Structure Of Dioclea Violacea Seed Lectin Length = 237

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP + H+GIDI                 G+     ISYNS    L
Sbjct: 4   IVAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTARWNMQT--GKVGTVHISYNSVAKRL 61
Query: 207 S--VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S  V+++G  +  V      Y VDL   LPE+V  G S  TG+     +I SW F S L+
Sbjct: 62  SAVVSYSGSSSTTV-----SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTSKLK 116
Query: 265 MD 266
            +
Sbjct: 117 TN 118

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 42  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 101
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 102 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 155
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 156 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 211
Query: 546 EIACGR 551
           E+  GR
Sbjct: 212 ELLTGR 217

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 389 SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLT 448
           S +  ++   E +I  +L+H N+V+L     E+    LV++ +  G L   +        
Sbjct: 45  SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 104
Query: 449 WEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA---KIGDFGLARLVEH 505
            +  + I Q L S + Y        +VHR++K  N++L S       K+ DFGLA  V  
Sbjct: 105 ADASHCIQQILES-IAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160
Query: 506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           ++       AGT GY++PE       SK  D+++ G++   +  G  P
Sbjct: 161 SEAWHG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 51  KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 110
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 111 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 164
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 165 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 546 EIACGR 551
           E+  GR
Sbjct: 221 ELLTGR 226

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 50  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 109
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 110 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 163
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 164 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 546 EIACGR 551
           E+  GR
Sbjct: 220 ELLTGR 225

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 44  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 103
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 104 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 157
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 158 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 213
Query: 546 EIACGR 551
           E+  GR
Sbjct: 214 ELLTGR 219

>pdb|2JE9|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora Lectin Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP + H+GIDI                 G+     ISYNS    L
Sbjct: 6   IVAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTARWNMQT--GKVGTVHISYNSVAKRL 63
Query: 207 S--VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S  V+++G  +  V      Y VDL   LPE+V  G S  TG+     +I SW F S L+
Sbjct: 64  SAVVSYSGSSSTTV-----SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTSKLK 118
Query: 265 MD 266
            +
Sbjct: 119 TN 120

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 43  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 102
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 103 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 156
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 157 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 212
Query: 546 EIACGR 551
           E+  GR
Sbjct: 213 ELLTGR 218

>pdb|3SH3|A Chain A, Crystal Structure Of A Pro-Inflammatory Lectin From The Seeds Of Dioclea Wilsonii Standl Length = 237

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP + H+GIDI                 G+     ISYNS    L
Sbjct: 4   IVAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTARWNMQT--GKVGTVHISYNSVAKRL 61
Query: 207 S--VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S  V+++G  +  V      Y VDL   LPE+V  G S  TG+     +I SW F S L+
Sbjct: 62  SAVVSYSGSSSTTV-----SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTSKLK 116
Query: 265 MD 266
            +
Sbjct: 117 TN 118

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 41  KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 100
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 101 VTHLM--GADLNNIVKCAKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 154
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 155 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 546 EIACGR 551
           E+  GR
Sbjct: 211 ELLTGR 216

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 50  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 109
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 110 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 163
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 164 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 546 EIACGR 551
           E+  GR
Sbjct: 220 ELLTGR 225

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 47  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 106
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 107 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 160
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 161 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 546 EIACGR 551
           E+  GR
Sbjct: 217 ELLTGR 222

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 52  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 111
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 112 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 165
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 166 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 546 EIACGR 551
           E+  GR
Sbjct: 222 ELLTGR 227

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           I  K++S    Q ++    E +I   L+H N+V+L     E+    L+++ +  G L   
Sbjct: 44  INTKKLSARDHQKLER---EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFED 100
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA---KIGD 496
           +         +  + I Q L + L   Q      VVHR++K  N++L S       K+ D
Sbjct: 101 IVAREYYSEADASHCIQQILEAVLHCHQ----MGVVHRNLKPENLLLASKLKGAAVKLAD 156
Query: 497 FGLARLVEHAKGSQTTVL--AGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  VE   G Q      AGT GY++PE        K  D+++ G++   +  G  P
Sbjct: 157 FGLAIEVE---GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 57  KTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 116
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 117 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 170
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 171 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 546 EIACGR 551
           E+  GR
Sbjct: 227 ELLTGR 232

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 389 SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLT 448
           S +  ++   E +I  +L+H N+V+L     E+    LV++ +  G L   +        
Sbjct: 68  SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 127
Query: 449 WEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA---KIGDFGLARLVEH 505
            +  + I Q L S + Y        +VHR++K  N++L S       K+ DFGLA  V  
Sbjct: 128 ADASHCIQQILES-IAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183
Query: 506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           ++       AGT GY++PE       SK  D+++ G++   +  G  P
Sbjct: 184 SEAWHG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 52  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 111
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 112 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 165
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 166 NEDCELKILDFGLAR---HTADEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 546 EIACGR 551
           E+  GR
Sbjct: 222 ELLTGR 227

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 47  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 106
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 107 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 160
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 161 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 546 EIACGR 551
           E+  GR
Sbjct: 217 ELLTGR 222

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 65  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 124
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 125 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 178
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 179 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 546 EIACGR 551
           E+  GR
Sbjct: 235 ELLTGR 240

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 52  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 111
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 112 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 165
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 166 NEDCELKILDFGLAR---HTADEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 546 EIACGR 551
           E+  GR
Sbjct: 222 ELLTGR 227

>pdb|1MVQ|A Chain A, Cratylia Mollis Lectin (Isoform 1) In Complex With Methyl-Alpha-D- Mannose Length = 236

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP++ H+GI+I                 G+   A ISYNS    L
Sbjct: 4   IVAVELDTYPNTDIGDPSYQHIGINIKSIRSKATTRWDVQN--GKVGTAHISYNSVAKRL 61
Query: 207 S--VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S  V++ G  +  V      Y VDL   LPE+V  G S +TG+     +I SW F S L+
Sbjct: 62  SAVVSYPGGSSATV-----SYDVDLNNILPEWVRVGLSASTGLYKETNTILSWSFTSKLK 116

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 47  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 106
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 107 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 160
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 161 NEDSELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 546 EIACGR 551
           E+  GR
Sbjct: 217 ELLTGR 222

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 64  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 123
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 124 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 177
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 178 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 233
Query: 546 EIACGR 551
           E+  GR
Sbjct: 234 ELLTGR 239

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 56  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 115
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 116 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 169
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 170 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 225
Query: 546 EIACGR 551
           E+  GR
Sbjct: 226 ELLTGR 231

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 374 RETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCH------EKKELL 425
           R T   +A+K++          K    E+KI+   +H N++ +           E K + 
Sbjct: 76  RLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY 135
Query: 426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
           +V + M    L   +     L     RY + Q L  GL Y+       V+HRD+K SN++
Sbjct: 136 VVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQ-LLRGLKYMHSAQ---VIHRDLKPSNLL 190
Query: 486 LDSNFNAKIGDFGLARLVEHAKGSQ---TTVLAGTMGYMAPECA-TTGKASKESDVYSFG 541
           ++ N   KIGDFG+AR +  +        T    T  Y APE   +  + ++  D++S G
Sbjct: 191 VNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 250
Query: 542 IVALEIACGRKPINPKAPQGQVSLLQWV 569
            +  E+   R+    K    Q+ L+  V
Sbjct: 251 CIFGEMLARRQLFPGKNYVHQLQLIMMV 278

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 57  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 116
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 117 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 170
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 171 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 546 EIACGR 551
           E+  GR
Sbjct: 227 ELLTGR 232

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 57  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 116
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 117 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 170
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 171 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 546 EIACGR 551
           E+  GR
Sbjct: 227 ELLTGR 232

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 51  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 110
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 111 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 164
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 165 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 546 EIACGR 551
           E+  GR
Sbjct: 221 ELLTGR 226

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 52  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 111
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 112 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 165
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 166 NEDCELKILDFGLAR---HTADEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 546 EIACGR 551
           E+  GR
Sbjct: 222 ELLTGR 227

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 68  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 127
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 128 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 181
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 182 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 237
Query: 546 EIACGR 551
           E+  GR
Sbjct: 238 ELLTGR 243

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 374 RETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCH------EKKELL 425
           R T   +A+K++          K    E+KI+   +H N++ +           E K + 
Sbjct: 77  RLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY 136
Query: 426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
           +V + M    L   +     L     RY + Q L  GL Y+       V+HRD+K SN++
Sbjct: 137 VVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQ-LLRGLKYMHSAQ---VIHRDLKPSNLL 191
Query: 486 LDSNFNAKIGDFGLARLVEHAKGSQ---TTVLAGTMGYMAPECA-TTGKASKESDVYSFG 541
           ++ N   KIGDFG+AR +  +        T    T  Y APE   +  + ++  D++S G
Sbjct: 192 VNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 251
Query: 542 IVALEIACGRKPINPKAPQGQVSLLQWV 569
            +  E+   R+    K    Q+ L+  V
Sbjct: 252 CIFGEMLARRQLFPGKNYVHQLQLIMMV 279

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 51  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 110
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 111 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 164
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 165 NEDCELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 546 EIACGR 551
           E+  GR
Sbjct: 221 ELLTGR 226

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 51  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 110
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 111 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 164
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 165 NEDSELKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 546 EIACGR 551
           E+  GR
Sbjct: 221 ELLTGR 226

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 24/163 (14%)
Query: 406 LRHRNLVQLLGW----CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS 461
           LRH N++  +       H   +L L+  +   GSL  +L  + + L      +I   +AS
Sbjct: 88  LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIAS 145
Query: 462 GLLYLQEEW-----EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA- 515
           GL +L  E      +  + HRD+KS NI++  N    I D GLA  V H++ +    +  
Sbjct: 146 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGN 203
Query: 516 ----GTMGYMAPEC------ATTGKASKESDVYSFGIVALEIA 548
               GT  YMAPE            + K  D+++FG+V  E+A
Sbjct: 204 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 246

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 24/163 (14%)
Query: 406 LRHRNLVQLLGW----CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS 461
           LRH N++  +       H   +L L+  +   GSL  +L  + + L      +I   +AS
Sbjct: 59  LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIAS 116
Query: 462 GLLYLQEEW-----EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA- 515
           GL +L  E      +  + HRD+KS NI++  N    I D GLA  V H++ +    +  
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGN 174
Query: 516 ----GTMGYMAPEC------ATTGKASKESDVYSFGIVALEIA 548
               GT  YMAPE            + K  D+++FG+V  E+A
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 390 KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL---DSHLFKENSL 446
           K    ++ +E++II+ +++   +   G      E+ ++YE+M N S+   D + F  +  
Sbjct: 84  KSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN 143
Query: 447 LTWEFRYKIAQDLASGLL----YLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL 502
            T     ++ + +   +L    Y+  E   C  HRD+K SNI++D N   K+ DFG +  
Sbjct: 144 YTCFIPIQVIKCIIKSVLNSFSYIHNEKNIC--HRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 503 V--EHAKGSQTTVLAGTMGYMAPECATTGKA--SKESDVYSFGI 542
           +  +  KGS+     GT  +M PE  +   +    + D++S GI
Sbjct: 202 MVDKKIKGSR-----GTYEFMPPEFFSNESSYNGAKVDIWSLGI 240

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 26/184 (14%)
Query: 381 AVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLG-W---------------CHEKKEL 424
            +KRV   +++       EVK +++L H N+V   G W                 + K L
Sbjct: 40  VIKRVKYNNEKA----EREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCL 95
Query: 425 LLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSN 483
            +  EF   G+L+  + K     L      ++ + +  G+ Y+     + +++RD+K SN
Sbjct: 96  FIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSN 152
Query: 484 IMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIV 543
           I L      KIGDFGL   +++      +   GT+ YM+PE  ++    KE D+Y+ G++
Sbjct: 153 IFLVDTKQVKIGDFGLVTSLKNDGKRXRS--KGTLRYMSPEQISSQDYGKEVDLYALGLI 210
Query: 544 ALEI 547
             E+
Sbjct: 211 LAEL 214

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 24/163 (14%)
Query: 406 LRHRNLVQLLGW----CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS 461
           LRH N++  +       H   +L L+  +   GSL  +L  + + L      +I   +AS
Sbjct: 59  LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIAS 116
Query: 462 GLLYLQEEW-----EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA- 515
           GL +L  E      +  + HRD+KS NI++  N    I D GLA  V H++ +    +  
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGN 174
Query: 516 ----GTMGYMAPEC------ATTGKASKESDVYSFGIVALEIA 548
               GT  YMAPE            + K  D+++FG+V  E+A
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 19/181 (10%)
Query: 380 IAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           IAVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ LV   M
Sbjct: 79  IAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM 138
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
             G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ ++ +  
Sbjct: 139 --GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAVNEDCE 192
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACG 550
            KI DFGLAR   H     T  +A T  Y APE        +   D++S G +  E+  G
Sbjct: 193 LKILDFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
Query: 551 R 551
           R
Sbjct: 249 R 249

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 41  KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 100
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 101 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 154
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR  +     +      T  Y APE         ++ D++S G +  
Sbjct: 155 NEDCELKILDFGLARHTD----DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 546 EIACGR 551
           E+  GR
Sbjct: 211 ELLTGR 216

>pdb|2D3P|A Chain A, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph Length = 236

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP + H+GI+I                 G+   A ISYNS    L
Sbjct: 4   IVAVELDTYPNTDIGDPNYQHIGINIKSIRSKATTRWNVQD--GKVGTAHISYNSVAKRL 61
Query: 207 S--VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S  V++ G  +  V      Y VDL   LPE+V  G S +TG+     +I SW F S L+
Sbjct: 62  SAIVSYPGGSSATV-----SYDVDLNNILPEWVRVGLSASTGLYKETNTILSWSFTSKLK 116
Query: 265 MD 266
            +
Sbjct: 117 TN 118

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKSQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGL R   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDSELKILDFGLCR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +     +K+     +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +         R+  AQ + +   YL       +++RD+K  N+++D   
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT   +APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVK----GRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 551 RKPINPKAP 559
             P     P
Sbjct: 235 YPPFFADQP 243

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H        +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMAGFVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           I  K++S    Q ++    E +I   L+H N+V+L     E+    LV++ +  G L   
Sbjct: 64  INTKKLSARDHQKLER---EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFED 120
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA---KIGD 496
           +         +  + I Q L S     Q +    +VHRD+K  N++L S       K+ D
Sbjct: 121 IVAREYYSEADASHCIHQILESVNHIHQHD----IVHRDLKPENLLLASKCKGAAVKLAD 176
Query: 497 FGLARLVEHAKGSQTT--VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  V+   G Q      AGT GY++PE        K  D+++ G++   +  G  P
Sbjct: 177 FGLAIEVQ---GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H        +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMAGFVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           I  K++S    Q ++    E +I   L+H N+V+L     E+    LV++ +  G L   
Sbjct: 37  INTKKLSARDHQKLER---EARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFED 93
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA---KIGD 496
           +         +  + I Q L + L   Q      VVHRD+K  N++L S       K+ D
Sbjct: 94  IVAREYYSEADASHCIQQILEAVLHCHQ----MGVVHRDLKPENLLLASKCKGAAVKLAD 149
Query: 497 FGLARLVEHAKGSQTT--VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           FGLA  V+   G Q      AGT GY++PE        K  D+++ G++   +  G  P
Sbjct: 150 FGLAIEVQ---GDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI D+GLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDYGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 374 RETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF- 430
           + +   +A+K++S+  +  I  K    E+ ++  ++H N++ LL        L   Y+F 
Sbjct: 64  KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 123
Query: 431 --MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS 488
             MP    D            + +Y + Q L  GL Y+       VVHRD+K  N+ ++ 
Sbjct: 124 LVMPFMQTDLQKIMGMEFSEEKIQYLVYQML-KGLKYIHSA---GVVHRDLKPGNLAVNE 179
Query: 489 NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEI 547
           +   KI DFGLAR   HA    T  +  T  Y APE   +     ++ D++S G +  E+
Sbjct: 180 DCELKILDFGLAR---HADAEMTGYVV-TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM 235
Query: 548 ACGR 551
             G+
Sbjct: 236 LTGK 239

>pdb|1QMO|A Chain A, Structure Of Fril, A Legume Lectin That Delays Hematopoietic Progenitor Maturation Length = 113

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 13/113 (11%)
Query: 32  ASALTFNYTSFSPQYDDNITYERAYPDSNRVIQL--------PANRETAGRATYNQSMRL 83
           A +L+F++T F P  +D + ++     +N V+Q+        P +  +AGR  Y+  +RL
Sbjct: 1   AQSLSFSFTKFDPNQED-LIFQGHATSTNNVLQVTKLDSAGNPVS-SSAGRVLYSAPLRL 58
Query: 84  WDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGL 136
           W+  +  LT F T  +F I +  +S  ADGLAFF+AP  S I  +  GG  GL
Sbjct: 59  WED-SAVLTSFDTIINFEISTPYTSRIADGLAFFIAPPDSVI--SYHGGFLGL 108

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 65  KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 124
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 125 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 178
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H        +A T  Y APE         ++ D++S G +  
Sbjct: 179 NEDCELKILDFGLAR---HTDDEMXGXVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 546 EIACGR 551
           E+  GR
Sbjct: 235 ELLTGR 240

>pdb|1CN1|A Chain A, Crystal Structure Of Demetallized Concanavalin A. The Metal- Binding Region Length = 237

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP++ H+GIDI                 G+   A I YNS    L
Sbjct: 4   IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQD--GKVGTAHIIYNSVDKRL 61
Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S A   + N       + Y VDL   LPE+V  G S +TG+     +I SW F S L+
Sbjct: 62  S-AVVSYPN--ADATSVSYDVDLNDVLPEWVRVGLSASTGLYKETNTILSWSFTSKLK 116

>pdb|2CNA|A Chain A, The Covalent And Three-Dimensional Structure Of Concanavalin A, Iv.Atomic Coordinates,Hydrogen Bonding,And Quaternary Structure Length = 237

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP++ H+GIDI                 G+   A I YNS    L
Sbjct: 4   IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQD--GKVGTAHIIYNSVDKRL 61
Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S A   + N       + Y VDL   LPE+V  G S +TG+     +I SW F S L+
Sbjct: 62  S-AVVSYPN--ADATSVSYDVDLNDVLPEWVRVGLSASTGLYKETNTILSWSFTSKLK 116

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 13/192 (6%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISR-LRHRNLVQLLGWCHEKKELLLVYEFMP 432
           +++N  +AVK + +G K  I E      I  R LRH N+V+          L +V E+  
Sbjct: 41  KQSNELVAVKYIERGEK--IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 98
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN--F 490
            G L   +         E R+   Q L SG+ Y        V HRD+K  N +LD +   
Sbjct: 99  GGELFERICNAGRFSEDEARF-FFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAP 154
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIAC 549
             KI  FG ++       SQ     GT  Y+APE     +   K +DV+S G+    +  
Sbjct: 155 RLKICAFGYSK--SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 550 GRKPI-NPKAPQ 560
           G  P  +P+ P+
Sbjct: 213 GAYPFEDPEEPK 224

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 86/193 (44%), Gaps = 15/193 (7%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISR-LRHRNLVQLLGWCHEKKELLLVYEFMP 432
           +++N  +AVK + +G K  I E      I  R LRH N+V+          L +V E+  
Sbjct: 41  KQSNELVAVKYIERGEK--IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 98
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN--F 490
            G L   +         E R+   Q L SG+ Y        V HRD+K  N +LD +   
Sbjct: 99  GGELFERICNAGRFSEDEARF-FFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAP 154
Query: 491 NAKIGDFGLAR-LVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIA 548
             KI  FG ++  V H++   T    GT  Y+APE     +   K +DV+S G+    + 
Sbjct: 155 RLKICAFGYSKSSVLHSQPKDTV---GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 549 CGRKPI-NPKAPQ 560
            G  P  +P+ P+
Sbjct: 212 VGAYPFEDPEEPK 224

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 374 RETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF- 430
           + +   +A+K++S+  +  I  K    E+ ++  ++H N++ LL        L   Y+F 
Sbjct: 46  KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105
Query: 431 --MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS 488
             MP    D            + +Y + Q L  GL Y+       VVHRD+K  N+ ++ 
Sbjct: 106 LVMPFMQTDLQKIMGLKFSEEKIQYLVYQML-KGLKYIHSA---GVVHRDLKPGNLAVNE 161
Query: 489 NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEI 547
           +   KI DFGLAR   HA    T  +  T  Y APE   +     ++ D++S G +  E+
Sbjct: 162 DCELKILDFGLAR---HADAEMTGYVV-TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM 217
Query: 548 ACGR 551
             G+
Sbjct: 218 LTGK 221

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 26/169 (15%)
Query: 399 EVKIISRLRHRNLVQLLG--WCHEKKELLLVYEFMPNGS---LDSHLFKENSLLTWEFRY 453
           E++++ RLRH+N++QL+   +  EK+++ +V E+   G    LDS           E R+
Sbjct: 56  EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDS---------VPEKRF 106
Query: 454 KIAQ------DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK 507
            + Q       L  GL YL     Q +VH+DIK  N++L +    KI   G+A  +    
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 508 GSQTTVLA-GTMGYMAPECATTGK--ASKESDVYSFGIVALEIACGRKP 553
              T   + G+  +  PE A      +  + D++S G+    I  G  P
Sbjct: 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212

>pdb|1DGL|A Chain A, Lectin From Dioclea Grandiflora Complexed To Trimannoside Length = 237

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE + Y N+   DP + H+GIDI                 G+     ISYNS    L
Sbjct: 4   IVAVELNSYPNTDIGDPNYPHIGIDIKSIRSKSTARWNMQT--GKVGTVHISYNSVAKRL 61
Query: 207 S--VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S  V+++G  +  V      Y VDL   LPE+V  G S  TG+     +I SW F S L+
Sbjct: 62  SAVVSYSGSSSTTV-----SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTSKLK 116
Query: 265 MD 266
            +
Sbjct: 117 TN 118

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 14/185 (7%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMP 432
           + TN   AVK + +  +    + + E++I+ R  +H N++ L     + K + LV E M 
Sbjct: 49  KATNMEYAVKVIDKSKR----DPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMR 104
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM-LDSNFN 491
            G L   + ++      E  + +   +   + YL     Q VVHRD+K SNI+ +D + N
Sbjct: 105 GGELLDKILRQKFFSEREASF-VLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGN 160
Query: 492 A---KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
               +I DFG A+ +    G   T    T  ++APE        +  D++S GI+   + 
Sbjct: 161 PECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTML 219
Query: 549 CGRKP 553
            G  P
Sbjct: 220 AGYTP 224

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 68  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 127
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 128 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 181
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DFGLAR   H        +A T  Y APE         ++ D++S G +  
Sbjct: 182 NEDCELKILDFGLAR---HTDDEMXGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 237
Query: 546 EIACGR 551
           E+  GR
Sbjct: 238 ELLTGR 243

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLA-----SGLLYLQEEWEQC 473
            ++  L LV ++   G L + L K        F  K+ +D+A       +L +    +  
Sbjct: 144 QDENHLYLVMDYYVGGDLLTLLSK--------FEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT----- 528
            VHRDIK  N++LD N + ++ DFG    +      Q++V  GT  Y++PE         
Sbjct: 196 YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 255
Query: 529 GKASKESDVYSFGIVALEIACGRKP 553
           GK   E D +S G+   E+  G  P
Sbjct: 256 GKYGPECDWWSLGVCMYEMLYGETP 280

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 14/185 (7%)
Query: 374 RETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMP 432
           + TN   AVK + +  +    + + E++I+ R  +H N++ L     + K + LV E M 
Sbjct: 49  KATNMEYAVKVIDKSKR----DPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMR 104
Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM-LDSNFN 491
            G L   + ++      E  + +   +   + YL     Q VVHRD+K SNI+ +D + N
Sbjct: 105 GGELLDKILRQKFFSEREASF-VLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGN 160
Query: 492 A---KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
               +I DFG A+ +    G   T    T  ++APE        +  D++S GI+   + 
Sbjct: 161 PECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTML 219
Query: 549 CGRKP 553
            G  P
Sbjct: 220 AGYTP 224

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLA-----SGLLYLQEEWEQC 473
            ++  L LV ++   G L + L K        F  K+ +D+A       +L +    +  
Sbjct: 160 QDENHLYLVMDYYVGGDLLTLLSK--------FEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT----- 528
            VHRDIK  N++LD N + ++ DFG    +      Q++V  GT  Y++PE         
Sbjct: 212 YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 271
Query: 529 GKASKESDVYSFGIVALEIACGRKP 553
           GK   E D +S G+   E+  G  P
Sbjct: 272 GKYGPECDWWSLGVCMYEMLYGETP 296

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 13/202 (6%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISR-LRHRNLVQLLGWCHEKKELLLVYEFMPNG 434
           T   +AVK + +G+   I E      I  R LRH N+V+          L ++ E+   G
Sbjct: 44  TKELVAVKYIERGA--AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGG 101
Query: 435 SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN--FNA 492
            L   +         E R+   Q L SG+ Y        + HRD+K  N +LD +     
Sbjct: 102 ELYERICNAGRFSEDEARF-FFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRL 157
Query: 493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGR 551
           KI DFG ++       SQ     GT  Y+APE     +   K +DV+S G+    +  G 
Sbjct: 158 KICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGA 215
Query: 552 KPI-NPKAPQGQVSLLQWVWDL 572
            P  +P+ P+     +Q +  +
Sbjct: 216 YPFEDPEEPRDYRKTIQRILSV 237

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 9/135 (6%)
Query: 423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRY-KIAQDLASGLLYLQEEWEQCVVHRDIKS 481
           E++L+ E+   G + S    E + +  E    ++ + +  G+ YL +     +VH D+K 
Sbjct: 103 EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKP 159
Query: 482 SNIMLDSNF---NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVY 538
            NI+L S +   + KI DFG++R + HA   +   + GT  Y+APE       +  +D++
Sbjct: 160 QNILLSSIYPLGDIKIVDFGMSRKIGHA--CELREIMGTPEYLAPEILNYDPITTATDMW 217
Query: 539 SFGIVALEIACGRKP 553
           + GI+A  +     P
Sbjct: 218 NIGIIAYMLLTHTSP 232

>pdb|1AZD|A Chain A, Concanavalin From Canavalia Brasiliensis Length = 237

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP++ H+GIDI                 G+   A I YNS    L
Sbjct: 4   IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQN--GKVGTAHIIYNSVGKRL 61
Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S A   + N       + Y VDL   LPE+V  G S +TG+     +I SW F S L+
Sbjct: 62  S-AVVSYPNGDSAT--VSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLK 116

>pdb|1IOA|A Chain A, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus Vulgaris Length = 240

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 70  ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNK 129
           ++ GRA Y+  +++ D  + N+  F T+F+F+I ++N S  A GLAF L P  S  P  K
Sbjct: 45  DSLGRAFYSDPIQIKD--SNNVASFNTNFTFIIRAKNQSISAYGLAFALVPVNS--PPQK 100
Query: 130 GGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDIXXXXXXXXXXXXXXXXX 189
                G+   N P   +   VAV F+ + N  D        D                  
Sbjct: 101 KQEFLGIFNTNNP-EPNARTVAVVFNTFKNRID-------FDKNFIKPYVNENCDFHKYN 152
Query: 190 GRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV-- 247
           G + +  I+Y+SS ++L V F  F  + V    +   V L + + E+V+ GFS  +G+  
Sbjct: 153 GEKTDVQITYDSSNNDLRV-FLHFTVSQVKC-SVSATVHLEKEVDEWVSVGFSPTSGLTE 210
Query: 248 -DFAIFSIYSWEFNSSL 263
                  + SW F+S  
Sbjct: 211 DTTETHDVLSWSFSSKF 227

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 21/192 (10%)
Query: 376 TNSYIAVKRVS-QGSKQGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN 433
           TN  +A+KR+  +  ++G+   A  EV ++  L+HRN+++L    H    L L++E+  N
Sbjct: 58  TNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN 117
Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA- 492
             L  ++ K N  ++          L +G+ +      +C +HRD+K  N++L  +  + 
Sbjct: 118 -DLKKYMDK-NPDVSMRVIKSFLYQLINGVNFCHS--RRC-LHRDLKPQNLLLSVSDASE 172
Query: 493 ----KIGDFGLARLVEHAKG---SQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVA 544
               KIGDFGLAR    A G    Q T    T+ Y  PE     +  S   D++S   + 
Sbjct: 173 TPVLKIGDFGLAR----AFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIW 228
Query: 545 LEIACGRKPINP 556
            E+   + P+ P
Sbjct: 229 AEMLM-KTPLFP 239

>pdb|2CTV|A Chain A, High Resolution Crystallographic Studies Of Native Concanavalin A Using Rapid Laue Data Collection Methods And The Introduction Of A Monochromatic Large-Angle Oscillation Technique (Lot) Length = 237

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP++ H+GIDI                 G+   A I YNS    L
Sbjct: 4   IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQN--GKVGTAHIIYNSVDKRL 61
Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S A   + N       + Y VDL   LPE+V  G S +TG+     +I SW F S L+
Sbjct: 62  S-AVVSYPN--ADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLK 116

>pdb|2OW4|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima Seeds (Conm) In Complex With Man1-2man-Ome Length = 237

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP++ H+GIDI                 G+   A I YNS    L
Sbjct: 4   IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQN--GKVGTAHIIYNSVGKRL 61
Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S A   + N       + Y VDL   LPE+V  G S +TG+     +I SW F S L+
Sbjct: 62  S-AVVSYPNGDSAT--VSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLK 116

>pdb|2CWM|A Chain A, Native Crystal Structure Of No Releasing Inductive Lectin From Seeds Of The Canavalia Maritima (Conm) Length = 237

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP++ H+GIDI                 G+   A I YNS    L
Sbjct: 4   IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQN--GKVGTAHIIYNSVGKRL 61
Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S A   + N       + Y VDL   LPE+V  G S +TG+     +I SW F S L+
Sbjct: 62  S-AVVSYPNGDSAT--VSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLK 116

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI  FGLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILGFGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI DF LAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDFYLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|1DHK|B Chain B, Structure Of Porcine Pancreatic Alpha-Amylase Length = 223

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 55  AYPDSNRVIQLPANR-ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADG 113
           A   SN  +QL  N  ++  RA Y+  +++ D  TGN+  F T+F+  I +   +  A G
Sbjct: 22  ATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVASFDTNFTMNIRTHRQANSAVG 81
Query: 114 LAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDIX 173
           L F L P     P +KG                   V VEFD ++       S + ID+ 
Sbjct: 82  LDFVLVPVQ---PESKGDT-----------------VTVEFDTFL-------SRISIDV- 113
Query: 174 XXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNLSVAF----TGFRNNLVVMQGLDYQVDL 229
                           G+  E  I+YNSST   SV+     TG  NN+         V+L
Sbjct: 114 NNNDIKSVPWDVHDYDGQNAEVRITYNSSTKVFSVSLSNPSTGKSNNVSTT------VEL 167
Query: 230 RQHLPEFVTFGFSMATGV---DFAIFSIYSWEFNS 261
            + + ++V+ GFS  +G     +    + SW F+S
Sbjct: 168 EKEVYDWVSVGFSATSGAYQWSYETHDVLSWSFSS 202

>pdb|2YZ4|A Chain A, The Neutron Structure Of Concanavalin A At 2.2 Angstroms Length = 237

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP++ H+GIDI                 G+   A I YNS    L
Sbjct: 4   IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQN--GKVGTAHIIYNSVDKRL 61
Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S A   + N       + Y VDL   LPE+V  G S +TG+     +I SW F S L+
Sbjct: 62  S-AVVSYPN--ADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLK 116

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           I  K++S    Q ++    E +I   L+H N+V+L     E+    LV++ +  G L   
Sbjct: 37  INTKKLSARDHQKLER---EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFED 93
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC----VVHRDIKSSNIMLDSNFNA--- 492
           +            Y    D +  +  + E    C    +VHRD+K  N++L S       
Sbjct: 94  IVARE--------YYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAV 145
Query: 493 KIGDFGLARLVEHAKGSQTT--VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
           K+ DFGLA  V+   G Q      AGT GY++PE        K  D+++ G++   +  G
Sbjct: 146 KLADFGLAIEVQ---GDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
Query: 551 RKP 553
             P
Sbjct: 203 YPP 205

>pdb|1WUV|A Chain A, Crystal Structure Of Native Canavalia Gladiata Lectin (Cgl): A Tetrameric Cona-Like Lectin Length = 237

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP + H+GIDI                 G+   A I YNS    L
Sbjct: 4   IVAVELDTYPNTDIGDPNYPHIGIDIKSVRSKKTAKWNMQN--GKVGTAHIIYNSVGKRL 61
Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S A   + N       + Y VDL   LPE+V  G S +TG+     +I SW F S L+
Sbjct: 62  S-AVVSYPNGDSAT--VSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLK 116

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 380 IAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           I  K++S    Q ++    E +I   L+H N+V+L     E+    LV++ +  G L   
Sbjct: 37  INTKKLSARDHQKLER---EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFED 93
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC----VVHRDIKSSNIMLDSNFNA--- 492
           +            Y    D +  +  + E    C    +VHRD+K  N++L S       
Sbjct: 94  IVARE--------YYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAV 145
Query: 493 KIGDFGLARLVEHAKGSQTT--VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
           K+ DFGLA  V+   G Q      AGT GY++PE        K  D+++ G++   +  G
Sbjct: 146 KLADFGLAIEVQ---GDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
Query: 551 RKP 553
             P
Sbjct: 203 YPP 205

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 28/190 (14%)
Query: 374 RETNSYIAVKRVSQGSKQG-IKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
           R+T   +A+K+  +      IK+ A  E++++ +L+H NLV LL     K+ L LV+E+ 
Sbjct: 25  RDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC 84
Query: 432 PNGSLDS----------HLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKS 481
            +  L            HL K    +TW+            L  +    +   +HRD+K 
Sbjct: 85  DHTVLHELDRYQRGVPEHLVKS---ITWQ-----------TLQAVNFCHKHNCIHRDVKP 130
Query: 482 SNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT-TGKASKESDVYSF 540
            NI++  +   K+ DFG ARL+          +A T  Y +PE      +     DV++ 
Sbjct: 131 ENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRSPELLVGDTQYGPPVDVWAI 189
Query: 541 GIVALEIACG 550
           G V  E+  G
Sbjct: 190 GCVFAELLSG 199

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI D GLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDAGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI D GLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDRGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|2OVU|A Chain A, Crystal Strucure Of A Lectin From Canavalia Gladiata (Cgl) In Complex With Man1-2man-Ome Length = 237

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDIXXXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP + H+GIDI                 G+   A I YNS    L
Sbjct: 4   IVAVELDTYPNTDIGDPDYPHIGIDIKSVRSKKTAKWNMQN--GKVGTAHIIYNSVGKRL 61
Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE 264
           S A   + N       + Y VDL   LPE+V  G S +TG+     +I SW F S L+
Sbjct: 62  S-AVVSYPNGDSAT--VSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLK 116

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 19/185 (10%)
Query: 376 TNSYIAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL------LLV 427
           T + +A+K++ +   S+   K    E++++  +RH N++ LL      + L       LV
Sbjct: 49  TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108
Query: 428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD 487
             FM  G+    L K   L     ++ + Q +  GL Y+       ++HRD+K  N+ ++
Sbjct: 109 MPFM--GTDLGKLMKHEKLGEDRIQFLVYQ-MLKGLRYIHA---AGIIHRDLKPGNLAVN 162
Query: 488 SNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALE 546
            +   KI DFGLAR  +    S+      T  Y APE      + ++  D++S G +  E
Sbjct: 163 EDCELKILDFGLARQAD----SEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE 218
Query: 547 IACGR 551
           +  G+
Sbjct: 219 MITGK 223

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 389 SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENS--- 445
           S+  +++  +E++++  L H N++++     +   + +V E    G L   +    +   
Sbjct: 60  SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGK 119
Query: 446 LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-DSNFNA--KIGDFGLARL 502
            L+  +  ++ + + + L Y      Q VVH+D+K  NI+  D++ ++  KI DFGLA L
Sbjct: 120 ALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176
Query: 503 VEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
            +      +T  AGT  YMAPE        K  D++S G+V   +  G  P
Sbjct: 177 FK--SDEHSTNAAGTALYMAPEVFKRDVTFK-CDIWSAGVVMYFLLTGCLP 224

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 19/181 (10%)
Query: 380 IAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +AVK++S+  +  I  +    E++++  L+H N++ LL          +  E+ LV   M
Sbjct: 56  VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
             G+  +++ K  +L     ++ + Q L  GL Y+       ++HRD+K SN+ ++ +  
Sbjct: 116 --GADLNNIVKSQALSDEHVQFLVYQ-LLRGLKYIHS---AGIIHRDLKPSNVAVNEDSE 169
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
            +I DFGLAR  +     + T    T  Y APE         ++ D++S G +  E+  G
Sbjct: 170 LRILDFGLARQAD----EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 551 R 551
           +
Sbjct: 226 K 226

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 375 ETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLL 426
           +T   +AVK++S+  +  I  K    E++++  ++H N++ LL          E  ++ L
Sbjct: 45  KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V   M  G+  +++ K   L     ++ I Q L  GL Y+       ++HRD+K SN+ +
Sbjct: 105 VTHLM--GADLNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHS---ADIIHRDLKPSNLAV 158
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVAL 545
           + +   KI D GLAR   H     T  +A T  Y APE         ++ D++S G +  
Sbjct: 159 NEDCELKILDGGLAR---HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 546 EIACGR 551
           E+  GR
Sbjct: 215 ELLTGR 220

>pdb|1VIW|B Chain B, Tenebrio Molitor Alpha-Amylase-Inhibitor Complex Length = 205

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 55  AYPDSNRVIQLPANR-ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADG 113
           A   SN  +QL  N  ++  RA Y+  +++ D  TGN+  F T+F+  I +   +  A G
Sbjct: 22  ATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVASFDTNFTMNIRTHRQANSAVG 81
Query: 114 LAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDIX 173
           L F L P     P +KG                   V VEFD ++       S + ID+ 
Sbjct: 82  LDFVLVPVQ---PESKGDT-----------------VTVEFDTFL-------SRISIDV- 113
Query: 174 XXXXXXXXXXXXXXXXGRRNEAWISYNSSTHNLSVAF----TGFRNNLVVMQGLDYQVDL 229
                           G+  E  I+YNSST   SV+     TG  NN+         V+L
Sbjct: 114 NNNDIKSVPWDVHDYDGQNAEVRITYNSSTKVFSVSLSNPSTGKSNNVSTT------VEL 167
Query: 230 RQHLPEFVTFGFSMATGV---DFAIFSIYSWEFNS 261
            + + ++V+ GFS  +G     +    + SW F+S
Sbjct: 168 EKEVYDWVSVGFSATSGAYQWSYETHDVLSWSFSS 202

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 381 AVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL--D 437
           A+KR+   +++  +E    EVK +++L H  +V+      EK     +    P   L   
Sbjct: 34  AIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQ 93
Query: 438 SHLFKENSLLTW-EFRYKIAQDLASGLLYLQEEWEQCV--------VHRDIKSSNIMLDS 488
             L ++ +L  W   R  I +   S  L++  +  + V        +HRD+K SNI    
Sbjct: 94  MQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM 153
Query: 489 NFNAKIGDFGLARLVEHAKGSQTTVL-----------AGTMGYMAPECATTGKASKESDV 537
           +   K+GDFGL   ++  +  QT +             GT  YM+PE       S + D+
Sbjct: 154 DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDI 213
Query: 538 YSFGIVALEI 547
           +S G++  E+
Sbjct: 214 FSLGLILFEL 223

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC-----ATTG 529
           VHRDIK  NI++D N + ++ DFG    +      Q++V  GT  Y++PE         G
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 530 KASKESDVYSFGIVALEIACGRKP 553
           +   E D +S G+   E+  G  P
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGETP 280

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
           KIA  +   L +L  +    V+HRD+K SN+++++    K+ DFG++  +        T+
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTI 212
Query: 514 LAGTMGYMAPECATTGKASK----ESDVYSFGIVALEIACGRKP 553
            AG   YMAPE        K    +SD++S GI  +E+A  R P
Sbjct: 213 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 256

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 398 SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQ 457
           +E++I+ +L H  ++++  +  + ++  +V E M  G L   +     L     +    Q
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN---AKIGDFGLARLVEHAKGSQTTVL 514
                LL +Q   E  ++HRD+K  N++L S       KI DFG ++++   + S    L
Sbjct: 248 ----MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 301
Query: 515 AGTMGYMAPECAT---TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSL 565
            GT  Y+APE      T   ++  D +S G++      G  P +    + QVSL
Sbjct: 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVSL 353

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 398 SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQ 457
           +E++I+ +L H  ++++  +  + ++  +V E M  G L   +     L     +    Q
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN---AKIGDFGLARLVEHAKGSQTTVL 514
                LL +Q   E  ++HRD+K  N++L S       KI DFG ++++   + S    L
Sbjct: 262 ----MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 315
Query: 515 AGTMGYMAPECAT---TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSL 565
            GT  Y+APE      T   ++  D +S G++      G  P +    + QVSL
Sbjct: 316 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVSL 367

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 23/195 (11%)
Query: 374 RETNSYIAVKRVSQG---SKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY 428
           RET    AVK V      S  G+  ++   E  I   L+H ++V+LL        L +V+
Sbjct: 46  RETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVF 105
Query: 429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC----VVHRDIKSSNI 484
           EFM    L   + K      + +   +A      +L   E    C    ++HRD+K   +
Sbjct: 106 EFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQIL---EALRYCHDNNIIHRDVKPHCV 161
Query: 485 MLDSNFNA---KIGDFGLARLVEHAKGSQTTVLAGTMG---YMAPECATTGKASKESDVY 538
           +L S  N+   K+G FG+A  +    G    V  G +G   +MAPE        K  DV+
Sbjct: 162 LLASKENSAPVKLGGFGVAIQL----GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVW 217
Query: 539 SFGIVALEIACGRKP 553
             G++   +  G  P
Sbjct: 218 GCGVILFILLSGCLP 232

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 19/181 (10%)
Query: 380 IAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +AVK++S+  +  I  +    E++++  L+H N++ LL          +  E+ LV   M
Sbjct: 48  VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 107
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
             G+  +++ K  +L     ++ + Q L  GL Y+       ++HRD+K SN+ ++ +  
Sbjct: 108 --GADLNNIVKCQALSDEHVQFLVYQ-LLRGLKYIHS---AGIIHRDLKPSNVAVNEDCE 161
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
            +I DFGLAR  +     + T    T  Y APE         ++ D++S G +  E+  G
Sbjct: 162 LRILDFGLARQAD----EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 217
Query: 551 R 551
           +
Sbjct: 218 K 218

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 23/195 (11%)
Query: 374 RETNSYIAVKRVSQG---SKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY 428
           RET    AVK V      S  G+  ++   E  I   L+H ++V+LL        L +V+
Sbjct: 48  RETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVF 107
Query: 429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC----VVHRDIKSSNI 484
           EFM    L   + K      + +   +A      +L   E    C    ++HRD+K   +
Sbjct: 108 EFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQIL---EALRYCHDNNIIHRDVKPHCV 163
Query: 485 MLDSNFNA---KIGDFGLARLVEHAKGSQTTVLAGTMG---YMAPECATTGKASKESDVY 538
           +L S  N+   K+G FG+A  +    G    V  G +G   +MAPE        K  DV+
Sbjct: 164 LLASKENSAPVKLGGFGVAIQL----GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVW 219
Query: 539 SFGIVALEIACGRKP 553
             G++   +  G  P
Sbjct: 220 GCGVILFILLSGCLP 234

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 32/167 (19%)
Query: 406 LRHRNLVQLLG--------WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQ 457
           +RH N++  +         W     +L L+ ++  NGSL  +L  +++ L  +   K+A 
Sbjct: 88  MRHENILGFIAADIKGTGSW----TQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAY 141
Query: 458 DLASGLLYLQEEW-----EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT 512
              SGL +L  E      +  + HRD+KS NI++  N    I D GLA  V+    +   
Sbjct: 142 SSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VKFISDTNEV 199
Query: 513 VL-----AGTMGYMAPECATTG------KASKESDVYSFGIVALEIA 548
            +      GT  YM PE           ++   +D+YSFG++  E+A
Sbjct: 200 DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 19/180 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ +V E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 432 PNGSLDSHLFKENSLLTWEFRY-KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L   + ++  E  + +++  L   L+ ++      ++HRD+K SNI++ S+ 
Sbjct: 112 -----DANL---SQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDA 163
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             KI DFGLAR          T    T  Y APE        +  D++S G++  E+  G
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL- 436
           +A+K++S+   ++   K    E+ ++  + H+N++ LL              F P  SL 
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 99
Query: 437 ---DSHLFKE--NSLLTWEFRYKIAQDLASGLLY-----LQEEWEQCVVHRDIKSSNIML 486
              D ++  E  ++ L    + ++  +  S LLY     ++      ++HRD+K SNI++
Sbjct: 100 EFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALE 546
            S+   KI DFGLAR    +   +  V+  T  Y APE        +  D++S G +  E
Sbjct: 160 KSDCTLKILDFGLARTAGTSFMMEPEVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 547 IACGR 551
           + C +
Sbjct: 218 MVCHK 222

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 19/181 (10%)
Query: 380 IAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +AVK++S+  +  I  +    E++++  L+H N++ LL          +  E+ LV   M
Sbjct: 56  VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
             G+  +++ K  +L     ++ + Q L  GL Y+       ++HRD+K SN+ ++ +  
Sbjct: 116 --GADLNNIVKCQALSDEHVQFLVYQ-LLRGLKYIHS---AGIIHRDLKPSNVAVNEDSE 169
Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIACG 550
            +I DFGLAR  +     + T    T  Y APE         ++ D++S G +  E+  G
Sbjct: 170 LRILDFGLARQAD----EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 551 R 551
           +
Sbjct: 226 K 226

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 19/180 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ +V E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 432 PNGSLDSHLFKENSLLTWEFRY-KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L   + ++  E  + +++  L   L+ ++      ++HRD+K SNI++ S+ 
Sbjct: 112 -----DANL---SQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDA 163
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             KI DFGLAR          T    T  Y APE        +  D++S G++  E+  G
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 27/185 (14%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL- 436
           +A+K++S+   ++   K    E+ ++  + H+N++ LL              F P  SL 
Sbjct: 57  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 104
Query: 437 ---DSHLFKE--NSLLTWEFRYKIAQDLASGLLY-----LQEEWEQCVVHRDIKSSNIML 486
              D ++  E  ++ L    + ++  +  S LLY     ++      ++HRD+K SNI++
Sbjct: 105 EFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 164
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALE 546
            S+   KI DFGLAR          T    T  Y APE        +  D++S G +  E
Sbjct: 165 KSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGE 222
Query: 547 IACGR 551
           + C +
Sbjct: 223 MVCHK 227

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 27/185 (14%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL- 436
           +A+K++S+   ++   K    E+ ++  + H+N++ LL              F P  SL 
Sbjct: 46  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 93
Query: 437 ---DSHLFKE--NSLLTWEFRYKIAQDLASGLLY-----LQEEWEQCVVHRDIKSSNIML 486
              D ++  E  ++ L    + ++  +  S LLY     ++      ++HRD+K SNI++
Sbjct: 94  EFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 153
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALE 546
            S+   KI DFGLAR          T    T  Y APE        +  D++S G +  E
Sbjct: 154 KSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGE 211
Query: 547 IACGR 551
           + C +
Sbjct: 212 MVCHK 216

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 19/193 (9%)
Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLLVYEFMPNG 434
           T+   AVK + +           EV+++ + + HRN+++L+ +  E+    LV+E M  G
Sbjct: 37  TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGG 96
Query: 435 SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN--- 491
           S+ SH+ K       E    + QD+AS L +L  +    + HRD+K  NI+ +       
Sbjct: 97  SILSHIHKRRHFNELEASV-VVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSP 152
Query: 492 AKIGDFGLA---RLVEHAKGSQTTVL---AGTMGYMAPEC--ATTGKAS---KESDVYSF 540
            KI DFGL    +L        T  L    G+  YMAPE   A + +AS   K  D++S 
Sbjct: 153 VKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212
Query: 541 GIVALEIACGRKP 553
           G++   +  G  P
Sbjct: 213 GVILYILLSGYPP 225

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 374 RETNSYIAVKRVSQ-----GSKQGIK---EYASEVKIISRLRHRNLVQLLGWCHEKKELL 425
           R+T   +A+K +S+     GS +         +E++I+ +L H  ++++  +  + ++  
Sbjct: 32  RKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYY 90
Query: 426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
           +V E M  G L   +     L     +    Q     LL +Q   E  ++HRD+K  N++
Sbjct: 91  IVLELMEGGELFDKVVGNKRLKEATCKLYFYQ----MLLAVQYLHENGIIHRDLKPENVL 146
Query: 486 LDSNFN---AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT---TGKASKESDVYS 539
           L S       KI DFG ++++   + S    L GT  Y+APE      T   ++  D +S
Sbjct: 147 LSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWS 204
Query: 540 FGIVALEIACGRKPINPKAPQGQVSL 565
            G++      G  P +    + QVSL
Sbjct: 205 LGVILFICLSGYPPFSEH--RTQVSL 228

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 374 RETNSYIAVKRVSQ-----GSKQGIK---EYASEVKIISRLRHRNLVQLLGWCHEKKELL 425
           R+T   +A+K +S+     GS +         +E++I+ +L H  ++++  +  + ++  
Sbjct: 32  RKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYY 90
Query: 426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
           +V E M  G L   +     L     +    Q     LL +Q   E  ++HRD+K  N++
Sbjct: 91  IVLELMEGGELFDKVVGNKRLKEATCKLYFYQ----MLLAVQYLHENGIIHRDLKPENVL 146
Query: 486 LDSNFN---AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT---TGKASKESDVYS 539
           L S       KI DFG ++++   + S    L GT  Y+APE      T   ++  D +S
Sbjct: 147 LSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWS 204
Query: 540 FGIVALEIACGRKPINPKAPQGQVSL 565
            G++      G  P +    + QVSL
Sbjct: 205 LGVILFICLSGYPPFSEH--RTQVSL 228

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 374 RETNSYIAVKRVSQ-----GSKQGIK---EYASEVKIISRLRHRNLVQLLGWCHEKKELL 425
           R+T   +A+K +S+     GS +         +E++I+ +L H  ++++  +  + ++  
Sbjct: 32  RKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYY 90
Query: 426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
           +V E M  G L   +     L     +    Q     LL +Q   E  ++HRD+K  N++
Sbjct: 91  IVLELMEGGELFDKVVGNKRLKEATCKLYFYQ----MLLAVQYLHENGIIHRDLKPENVL 146
Query: 486 LDSNFN---AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT---TGKASKESDVYS 539
           L S       KI DFG ++++   + S    L GT  Y+APE      T   ++  D +S
Sbjct: 147 LSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWS 204
Query: 540 FGIVALEIACGRKPINPKAPQGQVSL 565
            G++      G  P +    + QVSL
Sbjct: 205 LGVILFICLSGYPPFSEH--RTQVSL 228

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 374 RETNSYIAVKRVSQ-----GSKQGIK---EYASEVKIISRLRHRNLVQLLGWCHEKKELL 425
           R+T   +A+K +S+     GS +         +E++I+ +L H  ++++  +  + ++  
Sbjct: 38  RKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYY 96
Query: 426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
           +V E M  G L   +     L     +    Q     LL +Q   E  ++HRD+K  N++
Sbjct: 97  IVLELMEGGELFDKVVGNKRLKEATCKLYFYQ----MLLAVQYLHENGIIHRDLKPENVL 152
Query: 486 LDSNFN---AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT---TGKASKESDVYS 539
           L S       KI DFG ++++   + S    L GT  Y+APE      T   ++  D +S
Sbjct: 153 LSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWS 210
Query: 540 FGIVALEIACGRKPINPKAPQGQVSL 565
            G++      G  P +    + QVSL
Sbjct: 211 LGVILFICLSGYPPFSEH--RTQVSL 234

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL- 436
           +A+K++S+   ++   K    E+ ++  + H+N++ LL              F P  SL 
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 99
Query: 437 ---DSHLFKE--NSLLTWEFRYKIAQDLASGLLY-----LQEEWEQCVVHRDIKSSNIML 486
              D ++  E  ++ L    + ++  +  S LLY     ++      ++HRD+K SNI++
Sbjct: 100 EFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALE 546
            S+   KI DFGLAR    +   +  V+  T  Y APE        +  D++S G +  E
Sbjct: 160 KSDCTLKILDFGLARTAGTSFMMEPEVV--TRYYRAPEVILGMGYKENVDLWSVGCIMGE 217
Query: 547 IACGR 551
           + C +
Sbjct: 218 MVCHK 222

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 374 RETNSYIAVKRVSQ-----GSKQGIK---EYASEVKIISRLRHRNLVQLLGWCHEKKELL 425
           R+T   +A+K +S+     GS +         +E++I+ +L H  ++++  +  + ++  
Sbjct: 31  RKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYY 89
Query: 426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
           +V E M  G L   +     L     +    Q     LL +Q   E  ++HRD+K  N++
Sbjct: 90  IVLELMEGGELFDKVVGNKRLKEATCKLYFYQ----MLLAVQYLHENGIIHRDLKPENVL 145
Query: 486 LDSNFN---AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT---TGKASKESDVYS 539
           L S       KI DFG ++++   + S    L GT  Y+APE      T   ++  D +S
Sbjct: 146 LSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWS 203
Query: 540 FGIVALEIACGRKPINPKAPQGQVSL 565
            G++      G  P +    + QVSL
Sbjct: 204 LGVILFICLSGYPPFSEH--RTQVSL 227

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +AVK++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 50  VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 110 -----DANLCQVIHMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDC 161
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             KI DFGLAR    +     T    T  Y APE        +  D++S G +  E+  G
Sbjct: 162 TLKILDFGLARTA--STNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 112 -----DANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDX 163
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
             KI DFGLAR          T    T  Y APE        +  D++S G +  E+ 
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +AVK++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 52  VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 112 -----DANLCQVIHMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDC 163
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             KI DFGLAR          T    T  Y APE       +   D++S G +  E+  G
Sbjct: 164 TLKILDFGLARTA--CTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 112 -----DANLXQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDX 163
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
             KI DFGLAR          T    T  Y APE        +  D++S G +  E+ 
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 34/203 (16%)
Query: 374 RETNSYIAVKRVSQGSKQGI--KEYASEVKIISRLRHRNLVQLLGWCHEKK-----ELLL 426
           + T   +A+K+V++  +  I  K    E+ I++RL+   +++L             EL +
Sbjct: 48  KNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYI 107
Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V E     S    LFK    LT E    I  +L  G  ++ E     ++HRD+K +N +L
Sbjct: 108 VLEIA--DSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLL 162
Query: 487 DSNFNAKIGDFGLARLVEHAKGS---------------------QTTVLAGTMGYMAPEC 525
           + + + K+ DFGLAR +   K +                     Q T    T  Y APE 
Sbjct: 163 NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPEL 222
Query: 526 ATTGKA-SKESDVYSFGIVALEI 547
               +  +K  D++S G +  E+
Sbjct: 223 ILLQENYTKSIDIWSTGCIFAEL 245

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Query: 419 HEKKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
           H K+ LL++ E M  G L S + +  +   T     +I +D+ + + +L       + HR
Sbjct: 77  HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHR 133
Query: 478 DIKSSNIMLDSNFN---AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKE 534
           D+K  N++  S       K+ DFG A+  E  + +  T    T  Y+APE     K  K 
Sbjct: 134 DVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCY-TPYYVAPEVLGPEKYDKS 190
Query: 535 SDVYSFGIVALEIACGRKP 553
            D++S G++   + CG  P
Sbjct: 191 CDMWSLGVIMYILLCGFPP 209

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 16/238 (6%)
Query: 327 EYIDDEFERGAGPKRFPYKELALATNDFNDDQKLXXXXXXXXXXXXXRETNSYIAVKRVS 386
           +Y+ D F + A P     KE+ L  +DF   + +             ++T    A+K ++
Sbjct: 37  KYVAD-FLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMN 95
Query: 387 QGS--KQG-IKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKE 443
           +    K+G +  +  E  ++     R + QL     ++  L LV E+   G L + L K 
Sbjct: 96  KWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKF 155
Query: 444 NSLLTWEF-RYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL 502
              +  E  R+ +A+ + +    +        VHRDIK  NI+LD   + ++ DFG    
Sbjct: 156 GERIPAEMARFYLAEIVMA----IDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211
Query: 503 VEHAKGSQTTVLAGTMGYMAPEC-------ATTGKASKESDVYSFGIVALEIACGRKP 553
           +      ++ V  GT  Y++PE          TG    E D ++ G+ A E+  G+ P
Sbjct: 212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTT 512
           KIA  +   L +L  +    V+HRD+K SN+++++    K+ DFG++  LV+        
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD--- 167
Query: 513 VLAGTMGYMAPECATTGKASK----ESDVYSFGIVALEIACGRKP 553
           + AG   YMAPE        K    +SD++S GI  +E+A  R P
Sbjct: 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 212

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Query: 419 HEKKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
           H K+ LL++ E M  G L S + +  +   T     +I +D+ + + +L       + HR
Sbjct: 96  HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHR 152
Query: 478 DIKSSNIMLDSNFN---AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKE 534
           D+K  N++  S       K+ DFG A+  E  + +  T    T  Y+APE     K  K 
Sbjct: 153 DVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCY-TPYYVAPEVLGPEKYDKS 209
Query: 535 SDVYSFGIVALEIACGRKP 553
            D++S G++   + CG  P
Sbjct: 210 CDMWSLGVIMYILLCGFPP 228

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 19/188 (10%)
Query: 381 AVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSH 439
           AVK + + +         EV+ + + + ++N+++L+ +  +     LV+E +  GS+ +H
Sbjct: 42  AVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAH 101
Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN---AKIGD 496
           + K+      E   ++ +D+A+ L +L  +    + HRD+K  NI+ +S       KI D
Sbjct: 102 IQKQKHFNEREAS-RVVRDVAAALDFLHTKG---IAHRDLKPENILCESPEKVSPVKICD 157
Query: 497 FGLARLVEHAKGS------QTTVLAGTMGYMAPECAT--TGKAS---KESDVYSFGIVAL 545
           F L   ++           + T   G+  YMAPE     T +A+   K  D++S G+V  
Sbjct: 158 FDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLY 217
Query: 546 EIACGRKP 553
            +  G  P
Sbjct: 218 IMLSGYPP 225

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 19/180 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ +V E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 432 PNGSLDSHLFKENSLLTWEFRY-KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L   + ++  E  + +++  L   L+ ++      ++HRD+K SNI++ S+ 
Sbjct: 112 -----DANL---SQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDA 163
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             KI DFGLAR          T    T  Y APE        +  D++S G +  E+  G
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 112 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDX 163
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
             KI DFGLAR          T    T  Y APE        +  D++S G +  E+ 
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 45  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 105 -----DANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDX 156
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
             KI DFGLAR          T    T  Y APE        +  D++S G +  E+ 
Sbjct: 157 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL-----------AGTMGYMA 522
           ++HRD+K SNI    +   K+GDFGL   ++  +  QT +             GT  YM+
Sbjct: 185 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMS 244
Query: 523 PECATTGKASKESDVYSFGIVALEI 547
           PE       S + D++S G++  E+
Sbjct: 245 PEQIHGNNYSHKVDIFSLGLILFEL 269

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 90  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 150 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 201
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES-DVYSFGIVALEIA 548
             KI DFGLAR          T    T  Y APE    G   KE+ D++S G +  E+ 
Sbjct: 202 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE-VILGMGYKENVDIWSVGCIMGEMV 257

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 112 -----DANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDX 163
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
             KI DFGLAR          T    T  Y APE        +  D++S G +  E+ 
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 421 KKELLLVYEFMPNGSLDSHLF-KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDI 479
           +K LL+V E +  G L S +  + +   T     +I + +   + YL       + HRD+
Sbjct: 93  RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 149
Query: 480 KSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           K  N++  S   N   K+ DFG A+  E    +  T    T  Y+APE     K  K  D
Sbjct: 150 KPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 207
Query: 537 VYSFGIVALEIACGRKP 553
           ++S G++   + CG  P
Sbjct: 208 MWSLGVIMYILLCGYPP 224

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 421 KKELLLVYEFMPNGSLDSHLF-KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDI 479
           +K LL+V E +  G L S +  + +   T     +I + +   + YL       + HRD+
Sbjct: 91  RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 147
Query: 480 KSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           K  N++  S   N   K+ DFG A+  E    +  T    T  Y+APE     K  K  D
Sbjct: 148 KPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 205
Query: 537 VYSFGIVALEIACGRKP 553
           ++S G++   + CG  P
Sbjct: 206 MWSLGVIMYILLCGYPP 222

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 46  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 106 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 157
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
             KI DFGLAR          T    T  Y APE        +  D++S G +  E+ 
Sbjct: 158 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 421 KKELLLVYEFMPNGSLDSHLF-KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDI 479
           +K LL+V E +  G L S +  + +   T     +I + +   + YL       + HRD+
Sbjct: 92  RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 148
Query: 480 KSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           K  N++  S   N   K+ DFG A+  E    +  T    T  Y+APE     K  K  D
Sbjct: 149 KPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 206
Query: 537 VYSFGIVALEIACGRKP 553
           ++S G++   + CG  P
Sbjct: 207 MWSLGVIMYILLCGYPP 223

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 45  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 105 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 156
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
             KI DFGLAR          T    T  Y APE        +  D++S G +  E+ 
Sbjct: 157 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 46  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 106 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 157
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
             KI DFGLAR          T    T  Y APE        +  D++S G +  E+ 
Sbjct: 158 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 27/184 (14%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL- 436
           +A+K++S+   ++   K    E+ ++  + H+N++ LL              F P  SL 
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLE 99
Query: 437 ---DSHLFKE--NSLLTWEFRYKIAQDLASGLLY-----LQEEWEQCVVHRDIKSSNIML 486
              D ++  E  ++ L+   + ++  +  S LLY     ++      ++HRD+K SNI++
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALE 546
            S+   KI DFGLAR          T    T  Y APE        +  D++S G +  E
Sbjct: 160 KSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 547 IACG 550
           +  G
Sbjct: 218 MIKG 221

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 90  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 150 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 201
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
             KI DFGLAR          T    T  Y APE        +  D++S G +  E+ 
Sbjct: 202 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 421 KKELLLVYEFMPNGSLDSHLF-KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDI 479
           +K LL+V E +  G L S +  + +   T     +I + +   + YL       + HRD+
Sbjct: 86  RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 142
Query: 480 KSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           K  N++  S   N   K+ DFG A+  E    +  T    T  Y+APE     K  K  D
Sbjct: 143 KPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 200
Query: 537 VYSFGIVALEIACGRKP 553
           ++S G++   + CG  P
Sbjct: 201 MWSLGVIMYILLCGYPP 217

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 51  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 110
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 111 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 162
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
             KI DFGLAR          T    T  Y APE        +  D++S G +  E+ 
Sbjct: 163 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 53  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 113 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 164
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
             KI DFGLAR          T    T  Y APE        +  D++S G +  E+ 
Sbjct: 165 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 112 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 163
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
             KI DFGLAR          T    T  Y APE        +  D++S G +  E+ 
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 421 KKELLLVYEFMPNGSLDSHLF-KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDI 479
           +K LL+V E +  G L S +  + +   T     +I + +   + YL       + HRD+
Sbjct: 87  RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 143
Query: 480 KSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           K  N++  S   N   K+ DFG A+  E    +  T    T  Y+APE     K  K  D
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 201
Query: 537 VYSFGIVALEIACGRKP 553
           ++S G++   + CG  P
Sbjct: 202 MWSLGVIMYILLCGYPP 218

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 53  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 113 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 164
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
             KI DFGLAR          T    T  Y APE        +  D++S G +  E+ 
Sbjct: 165 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 421 KKELLLVYEFMPNGSLDSHLF-KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDI 479
           +K LL+V E +  G L S +  + +   T     +I + +   + YL       + HRD+
Sbjct: 85  RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 141
Query: 480 KSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           K  N++  S   N   K+ DFG A+  E    +  T    T  Y+APE     K  K  D
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 199
Query: 537 VYSFGIVALEIACGRKP 553
           ++S G++   + CG  P
Sbjct: 200 MWSLGVIMYILLCGYPP 216

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 380 IAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNLVQLLGW------CHEKKELLLVYEFM 431
           +A+K++S+   ++   K    E+ ++  + H+N++ LL          E +++ LV E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 432 PNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
                D++L +   + L  E    +   +  G+ +L       ++HRD+K SNI++ S+ 
Sbjct: 112 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 163
Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA 548
             KI DFGLAR          T    T  Y APE        +  D++S G +  E+ 
Sbjct: 164 TLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 421 KKELLLVYEFMPNGSLDSHLF-KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDI 479
           +K LL+V E +  G L S +  + +   T     +I + +   + YL       + HRD+
Sbjct: 101 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 157
Query: 480 KSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           K  N++  S   N   K+ DFG A+  E    +  T    T  Y+APE     K  K  D
Sbjct: 158 KPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 215
Query: 537 VYSFGIVALEIACGRKP 553
           ++S G++   + CG  P
Sbjct: 216 MWSLGVIMYILLCGYPP 232
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	645
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-135
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-128
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-128
3soc_A	322	Activin receptor type-2A; structural genomics cons	5e-83
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	6e-66
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-65
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-63
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-63
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	8e-63
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-61
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-60
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-60
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-58
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-57
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-56
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-54
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	6e-53
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-52
3zyr_A	261	Lectin; sugar binding protein, N-glycan; HET: NAG	2e-52
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-51
2eig_A	234	Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin	1e-51
1v6i_A	232	Agglutinin, PNA, galactose-binding lectin; open qu	4e-51
1fx5_A	242	UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO	1e-49
1dbn_A	239	MAL, protein (leukoagglutinin); plant lectin, carb	2e-49
1sbf_A	253	Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G	1e-48
1wbf_A	242	Protein (agglutinin); lectin (agglutinin), legume	1e-48
3ipv_A	251	Lectin alpha chain; galactose binding, SEED lectin	8e-48
1g7y_A	253	Stem/LEAF lectin DB58; jelly roll fold, sugar bind	9e-48
1fny_A	237	BARK lectin, BARK agglutinin I,polypeptide A; legu	1e-47
1fat_A	252	Phytohemagglutinin-L; glycoprotein, plant defense	2e-47
1avb_A	226	Arcelin-1; lectin-like glycoprotein, plant defense	6e-47
1qnw_A	242	Chitin binding lectin, UEA-II; carbohydrate bindin	8e-47
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-46
1n47_A	233	Isolectin B4; cancer antigen, vicia villosa lectin	1e-46
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-46
1hql_A	257	Lectin; xenograft antigen, sugar BI protein; HET:	2e-46
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-46
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	5e-46
2fmd_A	240	Lectin, agglutinin, BMA; legume lectin, beta sandw	6e-46
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	7e-46
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-45
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-45
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-45
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-45
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-45
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-45
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-45
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-45
1gzc_A	239	Erythrina crista-galli lectin; carbohydrate, sugar	3e-45
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	4e-45
2bqp_A	234	Protein (PEA lectin); D-glucopyranose complex, sug	6e-45
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	7e-45
1ioa_A	240	Arcelin-5A, ARC5A; lectin-like proteins, plant def	7e-45
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-44
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-44
1f9k_A	238	Acidic lectin; legume lectin, glycosylated protein	2e-44
1dhk_B	223	Bean lectin-like inhibitor, porcine pancreatic alp	2e-44
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-44
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	5e-44
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	5e-44
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	6e-44
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	7e-44
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	8e-44
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-43
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-43
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-43
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-43
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-43
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-43
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	4e-43
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-43
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	9e-43
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-42
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-42
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-42
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-42
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	4e-42
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-42
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	6e-42
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	6e-42
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	8e-42
1gsl_A	243	Griffonia simplicifolia lectin 4; glycoprotein, ma	1e-41
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-41
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-41
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-41
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-41
2a19_B	284	Interferon-induced, double-stranded RNA-activated	7e-41
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	7e-41
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-40
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-40
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-40
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-40
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-39
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-39
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-39
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-39
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-39
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-39
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-39
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	4e-39
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	6e-39
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	6e-39
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-38
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-38
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-38
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-38
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-38
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-38
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-38
2ltn_A	181	PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO	2e-38
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	3e-38
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	7e-38
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-36
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-36
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-36
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-35
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-35
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-35
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-34
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-34
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-34
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	4e-34
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	5e-34
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	6e-34
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-33
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-33
3fme_A	290	Dual specificity mitogen-activated protein kinase;	5e-33
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-33
2dyl_A	318	Dual specificity mitogen-activated protein kinase	7e-33
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-32
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-32
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-32
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-31
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-31
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-31
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-31
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-31
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-30
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	8e-30
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	8e-30
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-29
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-29
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-29
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	8e-29
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-28
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-28
3ork_A	311	Serine/threonine protein kinase; structural genomi	5e-28
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	5e-28
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	6e-28
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	6e-28
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-27
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-27
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-27
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-27
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-27
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	6e-27
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	6e-27
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	6e-27
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	8e-27
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	9e-27
1qmo_E	133	Mannose binding lectin, FRIL; crosslink, hematopoi	9e-27
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-26
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-26
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-26
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-26
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	3e-26
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-26
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-26
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-26
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	8e-26
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-25
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-25
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-25
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-25
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-25
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-25
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-25
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-25
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-25
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-25
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-25
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	6e-25
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	6e-25
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	7e-25
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	8e-25
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	9e-25
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-24
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-24
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-24
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-24
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-24
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-24
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-24
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-24
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	4e-24
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	4e-24
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	6e-24
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-23
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-23
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	3e-23
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	5e-17
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	4e-23
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	4e-23
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	5e-23
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	5e-23
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	6e-23
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-22
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	3e-22
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-22
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	4e-22
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	7e-22
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	7e-22
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	8e-22
3niz_A	311	Rhodanese family protein; structural genomics, str	9e-22
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-21
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-21
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	3e-21
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	8e-21
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-20
1gv9_A	260	P58/ergic-53; lectin, carbohydrate binding; 1.46A	1e-20
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-20
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-20
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	3e-20
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	3e-20
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	3e-20
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	6e-20
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	8e-20
2dur_A	253	VIP36;, vesicular integral-membrane protein VIP36;	9e-20
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-19
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-19
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-19
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-19
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-19
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	8e-19
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-18
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-18
1qmo_A	113	Mannose binding lectin, FRIL; crosslink, hematopoi	2e-18
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-18
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-18
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-17
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-17
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-17
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-17
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	8e-17
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	9e-17
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-16
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-16
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-16
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	5e-16
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	8e-16
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	3e-12
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	3e-12
2ltn_B	52	PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP	6e-12
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	6e-11
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-08
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	3e-08
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	3e-08
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	6e-08
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	7e-08
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	9e-08
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	1e-07
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-07
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	1e-06
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-05
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-05

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  397 bits (1022), Expect = e-135
 Identities = 113/300 (37%), Positives = 179/300 (59%), Gaps = 8/300 (2%)

Query: 330 DDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS 389
           D E   G   KRF  +EL +A+++F++   LG+GGFG VYKG      + +AVKR+ +  
Sbjct: 9   DPEVHLG-QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEER 66

Query: 390 KQGIK-EYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF---KENS 445
            QG + ++ +EV++IS   HRNL++L G+C    E LLVY +M NGS+ S L    +   
Sbjct: 67  TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 126

Query: 446 LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH 505
            L W  R +IA   A GL YL +  +  ++HRD+K++NI+LD  F A +GDFGLA+L+++
Sbjct: 127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186

Query: 506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ--V 563
                TT + GT+G++APE  +TGK+S+++DV+ +G++ LE+  G++  +         V
Sbjct: 187 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246

Query: 564 SLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
            LL WV  L    KL   VD  L  ++  +++E+L+ V L C       RP + +V+ +L
Sbjct: 247 MLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  379 bits (976), Expect = e-128
 Identities = 113/324 (34%), Positives = 177/324 (54%), Gaps = 12/324 (3%)

Query: 310 IGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVY 369
           +G K  +     N   S      FE      R P  +L  ATN+F+    +G G FG VY
Sbjct: 1   MGSKYSKATNSINDALSSSYLVPFES----YRVPLVDLEEATNNFDHKFLIGHGVFGKVY 56

Query: 370 KGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE 429
           KG  R+  + +A+KR +  S QGI+E+ +E++ +S  RH +LV L+G+C E+ E++L+Y+
Sbjct: 57  KGVLRD-GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK 115

Query: 430 FMPNGSLDSHLFKENSL---LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           +M NG+L  HL+  +     ++WE R +I    A GL YL       ++HRD+KS NI+L
Sbjct: 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILL 172

Query: 487 DSNFNAKIGDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
           D NF  KI DFG+++       +  +TV+ GT+GY+ PE    G+ +++SDVYSFG+V  
Sbjct: 173 DENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLF 232

Query: 546 EIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWC 605
           E+ C R  I    P+  V+L +W  + + NG+L + VDP L      + + +     + C
Sbjct: 233 EVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKC 292

Query: 606 AHPDENLRPSIRQVIHVLNFEAPL 629
                  RPS+  V+  L +   L
Sbjct: 293 LALSSEDRPSMGDVLWKLEYALRL 316

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  378 bits (974), Expect = e-128
 Identities = 109/307 (35%), Positives = 166/307 (54%), Gaps = 23/307 (7%)

Query: 335 RGAGPKRFPYKELALATNDFNDDQ------KLGQGGFGGVYKGFFRETNSYIAVKRVSQG 388
                  F + EL   TN+F++        K+G+GGFG VYKG+   T   +AVK+++  
Sbjct: 8   SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT--VAVKKLAAM 65

Query: 389 ----SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF--K 442
               +++  +++  E+K++++ +H NLV+LLG+  +  +L LVY +MPNGSL   L    
Sbjct: 66  VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 125

Query: 443 ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL 502
               L+W  R KIAQ  A+G+ +L E      +HRDIKS+NI+LD  F AKI DFGLAR 
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARA 182

Query: 503 VEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQG 561
            E    +  T+ + GT  YMAPE    G+ + +SD+YSFG+V LEI  G   ++      
Sbjct: 183 SEKFAQTVMTSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE-- 239

Query: 562 QVSLLQWVWDLYGNGKLLEA-VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
              LL    ++    K +E  +D ++  D D   +E +  V   C H  +N RP I++V 
Sbjct: 240 PQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQ 298

Query: 621 HVLNFEA 627
            +L    
Sbjct: 299 QLLQEMT 305

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  263 bits (673), Expect = 5e-83
 Identities = 77/306 (25%), Positives = 118/306 (38%), Gaps = 28/306 (9%)

Query: 342 FPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVK 401
              + L   +      +   +G FG V+K      N Y+AVK      KQ   +   EV 
Sbjct: 14  LGTENLYFQSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQS-WQNEYEVY 70

Query: 402 IISRLRHRNLVQLLGWC----HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQ 457
            +  ++H N++Q +G          +L L+  F   GSL   L     +++W     IA+
Sbjct: 71  SLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAE 128

Query: 458 DLASGLLYLQEE-------WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS- 509
            +A GL YL E+        +  + HRDIKS N++L +N  A I DFGLA   E  K + 
Sbjct: 129 TMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAG 188

Query: 510 QTTVLAGTMGYMAPECA-----TTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVS 564
            T    GT  YMAPE           A    D+Y+ G+V  E+A      +    +  + 
Sbjct: 189 DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLP 248

Query: 565 LLQWVWDLYGNGKLLEAV-----DPRLCRDFDGQQIERLMI-VGLWCAHPDENLRPSIRQ 618
             + +        + E V      P L   +       ++      C   D   R S   
Sbjct: 249 FEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGC 308

Query: 619 VIHVLN 624
           V   + 
Sbjct: 309 VGERIT 314

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  217 bits (556), Expect = 6e-66
 Identities = 85/280 (30%), Positives = 138/280 (49%), Gaps = 29/280 (10%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHR 409
            D N  +K+G G FG V++  +  ++  +AVK + +     + + E+  EV I+ RLRH 
Sbjct: 37  CDLNIKEKIGAGSFGTVHRAEWHGSD--VAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSL--LTWEFRYKIAQDLASGLLYLQ 467
           N+V  +G   +   L +V E++  GSL   L K  +   L    R  +A D+A G+ YL 
Sbjct: 95  NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL- 153

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT 527
                 +VHR++KS N+++D  +  K+ DFGL+RL      S  +  AGT  +MAPE   
Sbjct: 154 HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA-AGTPEWMAPEVLR 212

Query: 528 TGKASKESDVYSFGIVALEIACGRKP---INPKAPQGQVSLLQWVWDLYGNGKLLEAVDP 584
              ++++SDVYSFG++  E+A  ++P   +NP          Q V  +    K LE   P
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWGNLNP---------AQVVAAVGFKCKRLEI--P 261

Query: 585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           R        Q+  ++     C   +   RPS   ++ +L 
Sbjct: 262 RNLN----PQVAAII---EGCWTNEPWKRPSFATIMDLLR 294

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  218 bits (556), Expect = 1e-65
 Identities = 69/321 (21%), Positives = 124/321 (38%), Gaps = 47/321 (14%)

Query: 342 FPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVK 401
               E +L  ++    + +G+G +G VYKG   E    +AVK  S  ++Q    + +E  
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDER--PVAVKVFSFANRQ---NFINEKN 57

Query: 402 I--ISRLRHRNLVQLLGWCHE-----KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK 454
           I  +  + H N+ + +          + E LLV E+ PNGSL  +L        W    +
Sbjct: 58  IYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCR 115

Query: 455 IAQDLASGLLYLQEEWEQ------CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG 508
           +A  +  GL YL  E  +       + HRD+ S N+++ ++    I DFGL+  +   + 
Sbjct: 116 LAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRL 175

Query: 509 SQ-------TTVLAGTMGYMAPE-------CATTGKASKESDVYSFGIVALEIACGRKPI 554
            +            GT+ YMAPE             A K+ D+Y+ G++  EI      +
Sbjct: 176 VRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL 235

Query: 555 NP--KAPQGQVSLLQWVWDLYGNGKLLEAVD-----PRLCRDFDGQQIERLMIVGL---- 603
            P    P+ Q++    V +      +   V      P+    +    +    +       
Sbjct: 236 FPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDC 295

Query: 604 WCAHPDENLRPSIRQVIHVLN 624
           W    +   R + +     + 
Sbjct: 296 WDQDAEA--RLTAQXAEERMA 314

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  212 bits (541), Expect = 1e-63
 Identities = 76/307 (24%), Positives = 122/307 (39%), Gaps = 31/307 (10%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL 411
           +D    + LG+G FG   K   RET   + +K + +  ++  + +  EVK++  L H N+
Sbjct: 10  SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           ++ +G  ++ K L  + E++  G+L   +   +S   W  R   A+D+ASG+ YL     
Sbjct: 70  LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---S 126

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE-------------HAKGSQTTVLAGTM 518
             ++HRD+ S N ++  N N  + DFGLARL+                   +   + G  
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186

Query: 519 GYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL 578
            +MAPE        ++ DV+SFGIV  EI           P+     L            
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN-----VRGFLD 241

Query: 579 LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL-NFEAPLPALPPKMP 637
                P  C          +    + C   D   RPS  ++ H L      L    P  P
Sbjct: 242 RYC--PPNCPP----SFFPIT---VRCCDLDPEKRPSFVKLEHWLETLRMHLAGHLPLGP 292

Query: 638 VPTYLSP 644
               L  
Sbjct: 293 QLEQLDR 299

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  209 bits (534), Expect = 5e-63
 Identities = 80/305 (26%), Positives = 136/305 (44%), Gaps = 41/305 (13%)

Query: 338 GPKRFP-YKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQG---- 392
           G   FP  +   LA N+   ++++G+GGFG V+KG   +  S +A+K +  G  +G    
Sbjct: 4   GGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63

Query: 393 ---IKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTW 449
               +E+  EV I+S L H N+V+L G         +V EF+P G L   L  +   + W
Sbjct: 64  IEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKW 121

Query: 450 EFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-----NFNAKIGDFGLARLVE 504
             + ++  D+A G+ Y+ +     +VHRD++S NI L S        AK+ DFGL++   
Sbjct: 122 SVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV 180

Query: 505 HAKGSQTTVLAGTMGYMAPE--CATTGKASKESDVYSFGIVALEIACGRKP---INPKAP 559
           H      + L G   +MAPE   A     ++++D YSF ++   I  G  P    +    
Sbjct: 181 H----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK- 235

Query: 560 QGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQV 619
                 ++++  +   G       P  C      ++  ++     C   D   RP    +
Sbjct: 236 ------IKFINMIREEGLRPTI--PEDC----PPRLRNVI---ELCWSGDPKKRPHFSYI 280

Query: 620 IHVLN 624
           +  L+
Sbjct: 281 VKELS 285

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  209 bits (534), Expect = 8e-63
 Identities = 75/298 (25%), Positives = 128/298 (42%), Gaps = 28/298 (9%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL 411
            +   ++ +G+G FG V K  +R     +A+K++   S+   K +  E++ +SR+ H N+
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESE--RKAFIVELRQLSRVNHPNI 63

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSL--LTWEFRYKIAQDLASGLLYLQEE 469
           V+L G C     + LV E+   GSL + L     L   T           + G+ YL   
Sbjct: 64  VKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121

Query: 470 WEQCVVHRDIKSSNIMLDSNFN-AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT 528
             + ++HRD+K  N++L +     KI DFG A  ++    +  T   G+  +MAPE    
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ----THMTNNKGSAAWMAPEVFEG 177

Query: 529 GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR 588
              S++ DV+S+GI+  E+   RKP               +     NG        +   
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRKP-----FDEIGGPAFRIMWAVHNGTRPPL--IKNL- 229

Query: 589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL-NFEAPLPALPPKMPVPTYLSPP 645
               + IE LM     C   D + RPS+ +++ ++ +     P     +  P   S P
Sbjct: 230 ---PKPIESLM---TRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLP 281

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  205 bits (523), Expect = 1e-61
 Identities = 86/290 (29%), Positives = 129/290 (44%), Gaps = 43/290 (14%)

Query: 353 DFND---DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG----SKQGIKEYASEVKIISR 405
           DF +   ++ +G GGFG VY+ F+      +AVK           Q I+    E K+ + 
Sbjct: 5   DFAELTLEEIIGIGGFGKVYRAFWIGDE--VAVKAARHDPDEDISQTIENVRQEAKLFAM 62

Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
           L+H N++ L G C ++  L LV EF   G L+  L  +   +  +     A  +A G+ Y
Sbjct: 63  LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR--IPPDILVNWAVQIARGMNY 120

Query: 466 LQEEWEQCVVHRDIKSSNIMLD--------SNFNAKIGDFGLARLVEHAKGSQTTVLAGT 517
           L +E    ++HRD+KSSNI++         SN   KI DFGLAR       +     AG 
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR---TTKMSAAGA 177

Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP---INPKAPQGQVSLLQWVWDLYG 574
             +MAPE       SK SDV+S+G++  E+  G  P   I+          L   + +  
Sbjct: 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG---------LAVAYGVAM 228

Query: 575 NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           N   L    P  C     +   +LM     C +PD + RPS   ++  L 
Sbjct: 229 NKLALPI--PSTCP----EPFAKLM---EDCWNPDPHSRPSFTNILDQLT 269

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  202 bits (516), Expect = 2e-60
 Identities = 85/315 (26%), Positives = 149/315 (47%), Gaps = 39/315 (12%)

Query: 315 KEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFR 374
           K+G    + G  +  D ++E        P  ++ +        Q++G G FG VYKG + 
Sbjct: 2   KKGHHHHHHGSRDAAD-DWE-------IPDGQITVG-------QRIGSGSFGTVYKGKWH 46

Query: 375 ETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMP 432
                +AVK ++    + Q ++ + +EV ++ + RH N++  +G+     +L +V ++  
Sbjct: 47  GD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCE 102

Query: 433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
             SL  HL    +    +    IA+  A G+ YL     + ++HRD+KS+NI L  +   
Sbjct: 103 GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTV 159

Query: 493 KIGDFGLARLVEHAKGSQT-TVLAGTMGYMAPE---CATTGKASKESDVYSFGIVALEIA 548
           KIGDFGLA       GS     L+G++ +MAPE      +   S +SDVY+FGIV  E+ 
Sbjct: 160 KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 219

Query: 549 CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHP 608
            G+ P +    + Q+     +  + G G L   +     R    ++++RLM     C   
Sbjct: 220 TGQLPYSNINNRDQI-----IEMV-GRGSLSPDLSK--VRSNCPKRMKRLM---AECLKK 268

Query: 609 DENLRPSIRQVIHVL 623
             + RPS  +++  +
Sbjct: 269 KRDERPSFPRILAEI 283

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  198 bits (506), Expect = 1e-58
 Identities = 69/332 (20%), Positives = 130/332 (39%), Gaps = 46/332 (13%)

Query: 330 DDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG- 388
              F R A       +E  +        + +G+G FG VY G +      +A++ +    
Sbjct: 11  ARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE---VAIRLIDIER 67

Query: 389 -SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLL 447
            ++  +K +  EV    + RH N+V  +G C     L ++       +L S +     +L
Sbjct: 68  DNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVL 127

Query: 448 TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA- 506
                 +IAQ++  G+ YL     + ++H+D+KS N+  D N    I DFGL  +     
Sbjct: 128 DVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183

Query: 507 ---KGSQTTVLAGTMGYMAPE---------CATTGKASKESDVYSFGIVALEIACGRKP- 553
              +  +  +  G + ++APE                SK SDV++ G +  E+     P 
Sbjct: 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243

Query: 554 --INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
                +A   Q+          G G     +         G++I  ++   L+C   ++ 
Sbjct: 244 KTQPAEAIIWQM----------GTGMKPN-LSQIGM----GKEISDIL---LFCWAFEQE 285

Query: 612 LRPSIRQVIHVLNFEAPLPALPPKMPVPTYLS 643
            RP+  +++ +L     LP    ++  P +  
Sbjct: 286 ERPTFTKLMDMLE---KLPKRNRRLSHPGHFW 314

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  194 bits (495), Expect = 1e-57
 Identities = 54/284 (19%), Positives = 107/284 (37%), Gaps = 38/284 (13%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHR 409
              N   KL +   G ++KG ++  +  I VK +     S +  +++  E   +    H 
Sbjct: 10  KQLNFLTKLNENHSGELWKGRWQGND--IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67

Query: 410 NLVQLLGWCHE--KKELLLVYEFMPNGSLDSHLFK-ENSLLTWEFRYKIAQDLASGLLYL 466
           N++ +LG C         L+  +MP GSL + L +  N ++      K A D+A G+ +L
Sbjct: 68  NVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL 127

Query: 467 QEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC- 525
               E  +    + S ++M+D +  A+I    +          Q+        ++APE  
Sbjct: 128 -HTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF------QSPGRMYAPAWVAPEAL 180

Query: 526 --ATTGKASKESDVYSFGIVALEIACGRKP---INPKAPQGQVSLLQWVWDLYGNGKLLE 580
                    + +D++SF ++  E+     P   ++          ++    +   G    
Sbjct: 181 QKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN---------MEIGMKVALEGLRPT 231

Query: 581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
              P          + +LM     C + D   RP    ++ +L 
Sbjct: 232 I--PPGI----SPHVSKLM---KICMNEDPAKRPKFDMIVPILE 266

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  191 bits (486), Expect = 8e-56
 Identities = 67/313 (21%), Positives = 121/313 (38%), Gaps = 45/313 (14%)

Query: 340 KRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASE 399
           +R   +++ L        + +G+G +G V++G ++     +AVK  S    +  K +  E
Sbjct: 3   QRTVARDITL-------LECVGKGRYGEVWRGSWQGE--NVAVKIFSS---RDEKSWFRE 50

Query: 400 VKI--ISRLRHRNLVQLLGWC----HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY 453
            ++     LRH N++  +       H   +L L+  +   GSL  +L +  +L       
Sbjct: 51  TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTL-DTVSCL 108

Query: 454 KIAQDLASGLLYLQEEWEQC-----VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG 508
           +I   +ASGL +L  E         + HRD+KS NI++  N    I D GLA +   +  
Sbjct: 109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN 168

Query: 509 SQ---TTVLAGTMGYMAPE------CATTGKASKESDVYSFGIVALEIACGRKPINPKAP 559
                     GT  YMAPE            + K  D+++FG+V  E+A           
Sbjct: 169 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVED 228

Query: 560 -----QGQVSL---LQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
                   V      + +  +    +    +  R   D     + +LM     C + + +
Sbjct: 229 YKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMK---ECWYQNPS 285

Query: 612 LRPSIRQVIHVLN 624
            R +  ++   L 
Sbjct: 286 ARLTALRIKKTLT 298

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  184 bits (468), Expect = 6e-53
 Identities = 75/334 (22%), Positives = 128/334 (38%), Gaps = 53/334 (15%)

Query: 326 SEYIDDEFERGAGP------KRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSY 379
            + I+     G+G       +R   K++ +        +++G+G +G V+ G +R     
Sbjct: 12  RDLIEQSQSSGSGSGLPLLVQRTIAKQIQM-------VKQIGKGRYGEVWMGKWRGEK-- 62

Query: 380 IAVKRVSQGSKQGIKEYASEVKI--ISRLRHRNLVQLLGWCHEKK----ELLLVYEFMPN 433
           +AVK      +     +  E +I     +RH N++  +    +      +L L+ ++  N
Sbjct: 63  VAVKVFFTTEEA---SWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHEN 119

Query: 434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE-----WEQCVVHRDIKSSNIMLDS 488
           GSL  +L K  +L   +   K+A    SGL +L  E      +  + HRD+KS NI++  
Sbjct: 120 GSLYDYL-KSTTL-DAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK 177

Query: 489 NFNAKIGDFGLARLVEHAKGSQTTVL---AGTMGYMAPE------CATTGKASKESDVYS 539
           N    I D GLA                  GT  YM PE           ++   +D+YS
Sbjct: 178 NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYS 237

Query: 540 FGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV---------DPRLCRDF 590
           FG++  E+A  R        + Q+     V        + E V           R   D 
Sbjct: 238 FGLILWEVAR-RCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDE 296

Query: 591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
             +Q+ +LM     C   +   R +  +V   L 
Sbjct: 297 CLRQMGKLMT---ECWAHNPASRLTALRVKKTLA 327

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  183 bits (466), Expect = 1e-52
 Identities = 79/343 (23%), Positives = 137/343 (39%), Gaps = 51/343 (14%)

Query: 316 EGDEEDNQGFSEYIDDEFERGAG------PKRFPYKELALATNDFNDDQKLGQGGFGGVY 369
                +     + I D    G+G       +R   + + L        + +G+G FG V+
Sbjct: 7   RPFISEGTTLKDLIYDMTTSGSGSGLPLLVQRTIARTIVL-------QESIGKGRFGEVW 59

Query: 370 KGFFRETNSYIAVKRVSQGSKQG-IKEYASEVKIISRLRHRNLVQLLGWCHEKK----EL 424
           +G +R     +AVK  S   ++   +E  +E+     LRH N++  +   ++      +L
Sbjct: 60  RGKWRGEE--VAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADNKDNGTWTQL 115

Query: 425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC-----VVHRDI 479
            LV ++  +GSL  +L +    +T E   K+A   ASGL +L  E         + HRD+
Sbjct: 116 WLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 173

Query: 480 KSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL---AGTMGYMAPE------CATTGK 530
           KS NI++  N    I D GLA   + A  +         GT  YMAPE           +
Sbjct: 174 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 233

Query: 531 ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV-------- 582
           + K +D+Y+ G+V  EIA  R  I       Q+     V       ++ + V        
Sbjct: 234 SFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPN 292

Query: 583 -DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
              R       + + ++M     C + +   R +  ++   L+
Sbjct: 293 IPNRWQSCEALRVMAKIMR---ECWYANGAARLTALRIKKTLS 332

>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Length = 261

 Score =  180 bits (458), Expect = 2e-52
 Identities = 86/260 (33%), Positives = 132/260 (50%), Gaps = 20/260 (7%)

Query: 26  LTIIPLASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL-------PANRETAGRATY 77
           L       +L+F++ +F    + N+ ++  A+   N ++QL          R T GR  +
Sbjct: 3   LNRANSTDSLSFSFINFDRD-ERNLIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGRILH 61

Query: 78  NQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLT 137
           +  +RLW+K+T  + +  T FSF + S   S  ADG+AFF+AP  + IP+   GG  GL 
Sbjct: 62  SAQVRLWEKSTNRVANLQTQFSFFLSS-PLSNPADGIAFFIAPPDTTIPSGSAGGLLGLF 120

Query: 138 KDNEPLNSSI-PFVAVEFDVY----VNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRR 192
                LN S    +AVEFD +     N+WDP + H+GID+NS++S K V W  + + G+ 
Sbjct: 121 NPRTALNESANQVLAVEFDTFFAQNSNTWDPNYQHIGIDVNSIRSSKVVRW--ERREGKT 178

Query: 193 NEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIF 252
               ++YN ST  + V  T           L + VDL   LPE+V  GFS A+G  F   
Sbjct: 179 LNVLVTYNPSTRTIDVVATYPDGQ---RYQLSHVVDLTTILPEWVRVGFSAASGEQFQTH 235

Query: 253 SIYSWEFNSSLEMDDETTNP 272
           ++ SW F S+L    +  + 
Sbjct: 236 NLESWSFTSTLLYTAQKEDE 255

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  181 bits (462), Expect = 1e-51
 Identities = 79/292 (27%), Positives = 126/292 (43%), Gaps = 28/292 (9%)

Query: 339 PKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYA 397
            +  P  +  L   D    +++G+G FG V+ G  R  N+ +AVK   +        ++ 
Sbjct: 101 HRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFL 160

Query: 398 SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQ 457
            E +I+ +  H N+V+L+G C +K+ + +V E +  G   + L  E + L  +   ++  
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG 220

Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT 517
           D A+G+ YL+    +C +HRD+ + N ++      KI DFG++R              G 
Sbjct: 221 DAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA---DGVYAASGGL 274

Query: 518 MGY----MAPECATTGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDL 572
                   APE    G+ S ESDV+SFGI+  E    G  P  P     Q    ++V   
Sbjct: 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY-PNLSNQQT--REFV--- 328

Query: 573 YGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
              G  L    P LC D     + RLM     C   +   RPS   +   L 
Sbjct: 329 -EKGGRLPC--PELCPD----AVFRLM---EQCWAYEPGQRPSFSTIYQELQ 370

>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Length = 234

 Score =  177 bits (449), Expect = 1e-51
 Identities = 87/243 (35%), Positives = 127/243 (52%), Gaps = 18/243 (7%)

Query: 35  LTFNYTSFSPQYDDNITYER-AYPDSNRVIQL---PANRETAGRATYNQSMRLWDKATGN 90
           ++FNYT F    D ++ ++  A   ++  + +   P    T   A Y   + +WD ATGN
Sbjct: 1   VSFNYTRFKD--DGSLIFQGDAKIWTDGRLAMPTDPLVNRTTSHALYATPVPIWDSATGN 58

Query: 91  LTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFV 150
           +  F T FSF++ +       DG+ FFLAP G++IP N  GG  G+T  +   NS   FV
Sbjct: 59  VASFITSFSFIVSNVQRYPPTDGVVFFLAPWGTEIPPNSQGGYLGITDSS---NSQNQFV 115

Query: 151 AVEFDVYVNSW---DPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLS 207
           AVEFD + N W       SH+GID+NS+ S K V+W  +  SG   +A I Y+S T  L+
Sbjct: 116 AVEFDSHPNVWDPKSLRSSHIGIDVNSIMSLKAVNW--NRVSGSLEKATIIYDSDTKILT 173

Query: 208 VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMAT-GVDFAIFSIYSWEFNSSLEMD 266
           V  T     +     +  ++DL+  LPE V+ GFS  T   +     IYSW F S+L+  
Sbjct: 174 VVMTHQNGQITT---ISQEIDLKTVLPEKVSVGFSATTWNPERERHDIYSWSFTSTLKEP 230

Query: 267 DET 269
           +E 
Sbjct: 231 EEQ 233

>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Length = 232

 Score =  176 bits (446), Expect = 4e-51
 Identities = 89/238 (37%), Positives = 115/238 (48%), Gaps = 13/238 (5%)

Query: 32  ASALTFNYTSFSPQYDDNITYERAYPDSNRVIQL--PANRETAGRATYNQSMRLWDKATG 89
           A  ++FN+ SFS               SN  IQL       + GR  Y   +R+W  ATG
Sbjct: 1   AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATG 60

Query: 90  NLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPF 149
           N+  F T FSF +        ADG+ FF+AP+ ++IP    GG      D      +  F
Sbjct: 61  NVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDT---KGAGHF 117

Query: 150 VAVEFDVYVNSW--DPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLS 207
           V VEFD Y NS   DP   HVGID+NSV S K V W  +  SG   +  + Y+SST  LS
Sbjct: 118 VGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPW--NSVSGAVVKVTVIYDSSTKTLS 175

Query: 208 VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD-FAIFSIYSWEFNSSLE 264
           VA T    ++     +   VDL+  LPE V FGFS +  +    I  I SW F S+L 
Sbjct: 176 VAVTNDNGDITT---IAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLI 230

>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Length = 242

 Score =  171 bits (435), Expect = 1e-49
 Identities = 78/247 (31%), Positives = 115/247 (46%), Gaps = 17/247 (6%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQLPANRE-----TAGRATYNQSMRLWD 85
           +  L+F + +FS     +++++  A      V+QL          T G A Y   + +W+
Sbjct: 1   SDDLSFKFKNFSQ-NGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWN 59

Query: 86  KATGNLTDFTTHFSFVID-SRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN 144
             TG L  F T FSF ++ S N     DGL FFLAP     P  + GG FGL  D +  +
Sbjct: 60  CNTGELASFITSFSFFMETSANPKAATDGLTFFLAP--PDSPLRRAGGYFGLFNDTKC-D 116

Query: 145 SSIPFVAVEFDVYVNS---WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNS 201
           SS   VAVEFD   +    WDP F H+GID+N VKS     W             I Y +
Sbjct: 117 SSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERWNKRYGLNNVANVEIIYEA 176

Query: 202 STHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIF-SIYSWEFN 260
           S+  L+ + T   +       +   VDL++ LPE+V+ GFS +T +       + +W F 
Sbjct: 177 SSKTLTASLTYPSDQ--TSISVTSIVDLKEILPEWVSVGFSGSTYIGRQATHEVLNWYFT 234

Query: 261 SSLEMDD 267
           S+    +
Sbjct: 235 STFINTN 241

>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Length = 239

 Score =  171 bits (435), Expect = 2e-49
 Identities = 79/245 (32%), Positives = 123/245 (50%), Gaps = 19/245 (7%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL------PANRETAGRATYNQSMRLW 84
           +  L+F   +F P  + ++ ++  A   S  V+QL         + + GRA Y   +R+W
Sbjct: 1   SDELSFTINNFVP-NEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIW 59

Query: 85  DKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN 144
              TG++  F+T F+FV+ + N    +DGLAF+LAP  S+IP+       GL  ++   +
Sbjct: 60  GNTTGSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSNS-D 118

Query: 145 SSIPFVAVEFDVYVNS----WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYN 200
           SS   VAVEFD Y       WDP + H+GID+N ++S    +   D  +G    A I+Y 
Sbjct: 119 SSNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIES--IKTVQWDWINGGVAFATITYL 176

Query: 201 SSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS--IYSWE 258
           +    L  +     N       +   VDL++ LPE+V  GFS ATG    + +  + SW 
Sbjct: 177 APNKTLIASLVYPSNQ--TTFSVAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWS 234

Query: 259 FNSSL 263
           F S+L
Sbjct: 235 FTSTL 239

>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Length = 253

 Score =  169 bits (430), Expect = 1e-48
 Identities = 84/256 (32%), Positives = 126/256 (49%), Gaps = 20/256 (7%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL-------PANRETAGRATYNQSMRL 83
           A  ++F++  F P+   N+  +  A   S+  +QL            + GRA Y+  + +
Sbjct: 1   AETVSFSWNKFVPK-QPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHI 59

Query: 84  WDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPL 143
           WDK TG++  F   F+F   + ++   ADGLAFFLAP           G  GL  +NE  
Sbjct: 60  WDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAP--IDTKPQTHAGYLGLFNENESG 117

Query: 144 NSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSST 203
           +     VAVEFD + NSWDP   H+GI++NS++S K  SW  D+ + +  +  I+Y++ST
Sbjct: 118 D---QVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSW--DLANNKVAKVLITYDAST 172

Query: 204 HNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS--IYSWEFNS 261
             L  +             L   VDL+  LPE+V  GFS ATG+D    S  + SW F S
Sbjct: 173 SLLVASLVYPSQR--TSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFAS 230

Query: 262 SLEMDDETTNPVSNPK 277
           +L       +P+    
Sbjct: 231 NLPHASSNIDPLDLTS 246

>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Length = 242

 Score =  169 bits (429), Expect = 1e-48
 Identities = 89/251 (35%), Positives = 123/251 (49%), Gaps = 26/251 (10%)

Query: 33  SALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL------PANRETAGRATYNQSMRLWD 85
             ++FN+  F    ++ +  +R A   SN V++L           + GRA Y + +++WD
Sbjct: 2   KTISFNFNQFHQ-NEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWD 60

Query: 86  KATGNLTDFTTHFSFVIDSR-NSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN 144
             TGN+  F T FSF I       + ADGL FF+AP      T +GGG FG+        
Sbjct: 61  STTGNVASFETRFSFSIRQPFPRPHPADGLVFFIAP--PNTQTGEGGGYFGIYNP----L 114

Query: 145 SSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTH 204
           S  PFVAVEFD + N+WDP   H+GID+NSV S K V +   + +G      I Y++ST 
Sbjct: 115 SPYPFVAVEFDTFRNTWDPQIPHIGIDVNSVISTKTVPF--TLDNGGIANVVIKYDASTK 172

Query: 205 NLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS-------IYSW 257
            L V           +  +   VDL+Q LPE V  GFS ATG              I SW
Sbjct: 173 ILHVVLVFPSLG--TIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSW 230

Query: 258 EFNSSLEMDDE 268
            F++SL   +E
Sbjct: 231 SFSASLPGTNE 241

>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Length = 251

 Score =  167 bits (424), Expect = 8e-48
 Identities = 85/246 (34%), Positives = 116/246 (47%), Gaps = 21/246 (8%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL-------PANRETAGRATYNQSMRL 83
           A   +F ++ F P  + N+  +  A      V+QL            + GRATY+  + +
Sbjct: 1   AEETSFVFSKFKPL-EPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINI 59

Query: 84  WDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPL 143
           WD ATG +  F T F F I + N +  ADGLAFFLAP       + GGG  GL       
Sbjct: 60  WDSATGLVASFATSFRFTIYAPNIATIADGLAFFLAP--VASAPDSGGGFLGLFDSAVS- 116

Query: 144 NSSIPFVAVEFDVYVN--SWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNS 201
            S+   VAVEFD Y N    DP ++H+G D+NS+ S K V W   + +G   +  I+YNS
Sbjct: 117 GSTYQTVAVEFDTYENTVFTDPPYTHIGFDVNSISSIKTVKW--SLANGEAAKVLITYNS 174

Query: 202 STHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS---IYSWE 258
           +   L  +     +       L   VDL   LPE+V  GFS ATG          ++SW 
Sbjct: 175 AVKLLVASLVYPSSK--TSFILADIVDLSSVLPEWVRVGFSAATGASGGKIETHDVFSWS 232

Query: 259 FNSSLE 264
           F S L 
Sbjct: 233 FASKLA 238

>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Length = 253

 Score =  167 bits (424), Expect = 9e-48
 Identities = 80/254 (31%), Positives = 128/254 (50%), Gaps = 24/254 (9%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL-------PANRETAGRATYNQSMRL 83
           A   +F++ +F+     +   +  A   S+  ++L            + GRA Y+  +++
Sbjct: 1   ADIQSFSFKNFNS---SSFILQGDATVSSS-KLRLTKVKGNGLPTLSSLGRAFYSSPIQI 56

Query: 84  WDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPL 143
           +DK+TG +  + T F+  I + N S  ADG+AF L P GS+  +N G      +      
Sbjct: 57  YDKSTGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVY--- 113

Query: 144 NSSIPFVAVEFDVYVNS-WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSS 202
           ++S   VAVEFD + N+ WDPT  H+GID+NS+KS +  SW   + +G+  E  I+YN++
Sbjct: 114 DNSAQTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASW--GLANGQNAEILITYNAA 171

Query: 203 THNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS---IYSWEF 259
           T  L  +             +  +VD+   LPE+V+ GFS  TG+         + SW F
Sbjct: 172 TSLLVASLVHPSRR--TSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSF 229

Query: 260 NSSLEMDDETTNPV 273
            S L  DD TT P+
Sbjct: 230 ASKLP-DDSTTEPL 242

>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Length = 237

 Score =  166 bits (422), Expect = 1e-47
 Identities = 87/242 (35%), Positives = 125/242 (51%), Gaps = 17/242 (7%)

Query: 33  SALTFNYTSFSPQYDDNITYERAYPDSNRVIQL------PANRETAGRATYNQSMRLWDK 86
            +L+F++  F+P     I    A   S  V+QL        + ++ GRA Y    ++WD 
Sbjct: 2   GSLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDS 61

Query: 87  ATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSS 146
            TGN+  F T F+F+I + N +  ADGLAFFLAP          GG  G+ KD    N S
Sbjct: 62  TTGNVASFVTSFTFIIQAPNPATTADGLAFFLAP--VDTQPLDLGGMLGIFKDGYF-NKS 118

Query: 147 IPFVAVEFDVY-VNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHN 205
              VAVEFD +    WDP   H+GI++NS++S K V W  +  +G     +ISY +ST +
Sbjct: 119 NQIVAVEFDTFSNGDWDPKGRHLGINVNSIESIKTVPW--NWTNGEVANVFISYEASTKS 176

Query: 206 LSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS---IYSWEFNSS 262
           L+ +      +L     +D  VD++  LPE+V FGFS  TG+D        + SW F S+
Sbjct: 177 LTASLVY--PSLETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFESN 234

Query: 263 LE 264
           L 
Sbjct: 235 LP 236

>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Length = 252

 Score =  166 bits (421), Expect = 2e-47
 Identities = 89/256 (34%), Positives = 128/256 (50%), Gaps = 26/256 (10%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL-------PANRETAGRATYNQSMRL 83
           ++ + FN+  F+     N+  +R A   S+  ++L            + GRA Y+  +++
Sbjct: 1   SNDIYFNFQRFNE---TNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQI 57

Query: 84  WDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPL 143
           WD  TG +  F T F+F I   N++  ADGLAF L P GS       GG  GL   +   
Sbjct: 58  WDNTTGTVASFATSFTFNIQVPNNAGPADGLAFALVPVGS--QPKDKGGFLGLFDGS--- 112

Query: 144 NSSIPFVAVEFD-VYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSS 202
           NS+   VAVEFD +Y   WDPT  H+GID+NS++S K   W  D  +G   E  I+Y+SS
Sbjct: 113 NSNFHTVAVEFDTLYNKDWDPTERHIGIDVNSIRSIKTTRW--DFVNGENAEVLITYDSS 170

Query: 203 THNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS---IYSWEF 259
           T+ L  +             +   VDL+  LPE+V+ GFS  TG++        + SW F
Sbjct: 171 TNLLVASLVYPSQK--TSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSF 228

Query: 260 NSSLEMDDETTNPVSN 275
            S L   DETT+   N
Sbjct: 229 ASKL--SDETTSEGLN 242

>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 226

 Score =  164 bits (416), Expect = 6e-47
 Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 23/240 (9%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL----PANRETAGRATYNQSMRLWDK 86
           ++  +FN  +F+     N+  +  A   S   + L        ++ GRA Y+  +++ D+
Sbjct: 1   SNDASFNVETFNK---TNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDR 57

Query: 87  ATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSS 146
              NL  F+T+F+F I+++N    A GLAF L P          G   GL       +  
Sbjct: 58  TIDNLASFSTNFTFRINAKNIENSAYGLAFALVP--VGSRPKLKGRYLGLFNTTNY-DRD 114

Query: 147 IPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNL 206
              VAV FD   N        + ID+NS++     S      +G + E  I+Y+S  ++L
Sbjct: 115 AHTVAVVFDTVSN-------RIEIDVNSIRPIATESCNFGHNNGEKAEVRITYDSPKNDL 167

Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS---IYSWEFNSSL 263
            V+      +      +   V L + + ++V+ GFS  +G          + SW F+S+ 
Sbjct: 168 RVSLLY--PSSEEKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWSFSSNF 225

>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Length = 242

 Score =  164 bits (416), Expect = 8e-47
 Identities = 90/248 (36%), Positives = 132/248 (53%), Gaps = 18/248 (7%)

Query: 31  LASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL----PANRETAGRATYNQSMRLWD 85
           L+  L+FN+  F P    NI ++  A   +  V+Q+         + GRA Y   +++WD
Sbjct: 2   LSDDLSFNFDKFVP-NQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWD 60

Query: 86  KATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNS 145
             TG +  F T FSFV+ + + S   DGLAFFLAP  S+IP+    G FGL   ++   S
Sbjct: 61  SITGKVASFATSFSFVVKA-DKSDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSDS-KS 118

Query: 146 SIPFVAVEFDVYVNS----WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNS 201
           S   +AVEFD Y       WDP F H+GID+NS+KS K V W  D ++G   +  I+Y +
Sbjct: 119 SNQIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVKW--DWRNGEVADVVITYRA 176

Query: 202 STHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATG--VDFAIFSIYSWEF 259
            T +L+V  +   +       +   VDL+  LPE+V+ GFS   G   +F    + SW F
Sbjct: 177 PTKSLTVCLSYPSDG--TSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYF 234

Query: 260 NSSLEMDD 267
            S+LE ++
Sbjct: 235 TSNLEANN 242

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  165 bits (420), Expect = 1e-46
 Identities = 68/273 (24%), Positives = 118/273 (43%), Gaps = 35/273 (12%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVS--QGSKQGIKEYASEVKIISRLRHRNLVQL 414
           D ++G+G F  VYKG   ET   +A   +   + +K   + +  E +++  L+H N+V+ 
Sbjct: 31  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 90

Query: 415 LG----WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
                     KK ++LV E M +G+L ++L K   ++  +      + +  GL +L    
Sbjct: 91  YDSWESTVKGKKCIVLVTELMTSGTLKTYL-KRFKVMKIKVLRSWCRQILKGLQFLHTR- 148

Query: 471 EQCVVHRDIKSSNIMLDS-NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG 529
              ++HRD+K  NI +     + KIGD GLA L    + S    + GT  +MAPE     
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK---RASFAKAVIGTPEFMAPEMYEEK 205

Query: 530 KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL--- 586
              +  DVY+FG+  LE+A    P +      Q+              +  A   ++   
Sbjct: 206 -YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR-------VTSGVKPASFDKVAIP 257

Query: 587 -CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQ 618
             ++     IE        C   +++ R SI+ 
Sbjct: 258 EVKEI----IEG-------CIRQNKDERYSIKD 279

>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Length = 233

 Score =  163 bits (414), Expect = 1e-46
 Identities = 79/240 (32%), Positives = 123/240 (51%), Gaps = 20/240 (8%)

Query: 34  ALTFNYTSFSPQYDDNITYER-AYPDSNRVIQLPANRE------TAGRATYNQSMRLWDK 86
           + +F++T+F+P   +N+  +  A  +S   ++L A         + GRA Y   + + D 
Sbjct: 3   STSFSFTNFNP-NQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDN 61

Query: 87  ATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSS 146
            T  L  FTT FSFV+ +  ++  ADGLAFFLAP  ++     G       + ++     
Sbjct: 62  TT--LASFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQPQARGGFLGLFADRAHDASY-- 117

Query: 147 IPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNL 206
              VAVEFD Y N+WDP ++H+GID N ++SKK   +  D+  G +    I+Y +ST  L
Sbjct: 118 -QTVAVEFDTYSNAWDPNYTHIGIDTNGIESKKTTPF--DMVYGEKANIVITYQASTKAL 174

Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS---IYSWEFNSSL 263
           + +     +       +  +VDLR  LPE+V  GFS  TG++  +     I SW F  SL
Sbjct: 175 AASLVFPVSQ--TSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWSFAVSL 232

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  164 bits (417), Expect = 2e-46
 Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 44/285 (15%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           Q++G G FG V+ G++   +  +A+K + +G+    +++  E +++ +L H  LVQL G 
Sbjct: 14  QEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGV 71

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
           C E+  + LV EFM +G L  +L  +  L   E    +  D+  G+ YL+   E CV+HR
Sbjct: 72  CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHR 128

Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM---GYMAPECATTGKASKE 534
           D+ + N ++  N   K+ DFG+ R V      Q T   GT     + +PE  +  + S +
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKFPVKWASPEVFSFSRYSSK 185

Query: 535 SDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD-------PRL 586
           SDV+SFG++  E+   G+ P                ++   N +++E +        PRL
Sbjct: 186 SDVWSFGVLMWEVFSEGKIP----------------YENRSNSEVVEDISTGFRLYKPRL 229

Query: 587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN--FEAPL 629
                   + ++M     C       RP+  +++  L    E+ L
Sbjct: 230 AST----HVYQIM---NHCWRERPEDRPAFSRLLRQLAEIAESGL 267

>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Length = 257

 Score =  163 bits (414), Expect = 2e-46
 Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 18/257 (7%)

Query: 32  ASALTFNYTSFSPQYDDNITYERAYPDSNRVIQL-------PANRETAGRATYNQSMRLW 84
           + +++F + +F    +D+I ++     +   +QL          + +AGRA Y+  ++LW
Sbjct: 2   SDSVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLW 61

Query: 85  DKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN 144
           D  T ++  F T F+F +    +   ADGLAFFLAP  S +    G       K      
Sbjct: 62  DNKTESVASFYTEFTFFLKITGNGP-ADGLAFFLAPPDSDVKDA-GEYLGLFNKSTATQP 119

Query: 145 SSIPFVAVEFDVY--VNSWDPTFSHVGIDINSVKSKKNVSWWS-DVKSGRRNEAWISYNS 201
           S    VAVEFD +   N  +P++ H+GI++NS+ S     W   D+ SG+   A ISY+ 
Sbjct: 120 SKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKRWEDSDIFSGKIATARISYDG 179

Query: 202 STHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIF-SIYSWEFN 260
           S   L+V  +    +  +   L + VD+RQ+LPE V  G S +TG +  +   I SW F+
Sbjct: 180 SAEILTVVLSYPDGSDYI---LSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFS 236

Query: 261 SSLEMDDETTNPVSNPK 277
           S+L+    +      P+
Sbjct: 237 SNLQ--STSVKAAMEPE 251

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  165 bits (420), Expect = 4e-46
 Identities = 78/308 (25%), Positives = 143/308 (46%), Gaps = 45/308 (14%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSY----IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNL 411
            + +G G FG VYKG  + ++      +A+K +  G +++   ++  E  I+ +  H N+
Sbjct: 49  QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           ++L G   + K ++++ E+M NG+LD  L +++   +      + + +A+G+ YL     
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---N 165

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGY--MAPECATTG 529
              VHRD+ + NI+++SN   K+ DFGL+R++E    +  T   G +     APE  +  
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225

Query: 530 KASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD----- 583
           K +  SDV+SFGIV  E+   G +P                +    N ++++A++     
Sbjct: 226 KFTSASDVWSFGIVMWEVMTYGERP----------------YWELSNHEVMKAINDGFRL 269

Query: 584 --PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN--FEAP--LPALPPKMP 637
             P  C       I +LM   + C   +   RP    ++ +L+    AP  L  L    P
Sbjct: 270 PTPMDCPS----AIYQLM---MQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFDP 322

Query: 638 VPTYLSPP 645
             +   P 
Sbjct: 323 RVSIRLPS 330

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  163 bits (416), Expect = 5e-46
 Identities = 83/307 (27%), Positives = 141/307 (45%), Gaps = 38/307 (12%)

Query: 336 GAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFR----ETNSYIAVKRVSQGSKQ 391
           G+ P +F  + L          Q+LG+G FG V    +      T   +AVK++   +++
Sbjct: 1   GSDPTQFEERHLKF-------LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE 53

Query: 392 GIKEYASEVKIISRLRHRNLVQLLGWCHEKKE--LLLVYEFMPNGSLDSHLFKENSLLTW 449
            ++++  E++I+  L+H N+V+  G C+      L L+ E++P GSL  +L K    +  
Sbjct: 54  HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 113

Query: 450 EFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS 509
               +    +  G+ YL     +  +HRD+ + NI++++    KIGDFGL +++   K  
Sbjct: 114 IKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF 170

Query: 510 QTTVLAGTM--GYMAPECATTGKASKESDVYSFGIVALEIA-CGRKPINPKA-------- 558
                 G     + APE  T  K S  SDV+SFG+V  E+     K  +P A        
Sbjct: 171 FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 230

Query: 559 -PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIR 617
             QGQ+ +   + +L  N   L    P  C D    +I  +M     C + + N RPS R
Sbjct: 231 DKQGQMIVFH-LIELLKNNGRLPR--PDGCPD----EIYMIM---TECWNNNVNQRPSFR 280

Query: 618 QVIHVLN 624
            +   ++
Sbjct: 281 DLALRVD 287

>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Length = 240

 Score =  161 bits (409), Expect = 6e-46
 Identities = 82/243 (33%), Positives = 124/243 (51%), Gaps = 18/243 (7%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQLPANRE-------TAGRATYNQSMRL 83
           A+++ F +T F      ++ ++  A   SN+ +QL            + GRA Y   +RL
Sbjct: 1   ANSVCFTFTDFES-GQQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRL 59

Query: 84  WDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPL 143
           W   +  +  F T F+F I   +S+  AD L FF+A   +KIP+  GG   GL   +   
Sbjct: 60  WQS-SSLVASFETTFTFSISQGSSTP-ADALTFFIASPDTKIPSGSGGRLLGLFGSSNNA 117

Query: 144 NSSIPFVAVEFDVYVN--SWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNS 201
            S    V+VEFD Y N    DP + H+GID+NS++SK    W  D ++G+   A ISYNS
Sbjct: 118 GSDNGVVSVEFDTYPNTDIGDPNYRHIGIDVNSIRSKAASKW--DWQNGKTATAHISYNS 175

Query: 202 STHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNS 261
           ++  LSV  +   ++ VV   + + V+L    P++V  GFS  TG      +I +W F S
Sbjct: 176 ASKRLSVVSSYPNSSPVV---VSFDVELNNVBPBWVRVGFSATTGQYTQTNNILAWSFRS 232

Query: 262 SLE 264
           SL 
Sbjct: 233 SLM 235

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  162 bits (413), Expect = 7e-46
 Identities = 73/278 (26%), Positives = 125/278 (44%), Gaps = 42/278 (15%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           ++LG G FG V  G ++     +AVK + +GS     E+  E + + +L H  LV+  G 
Sbjct: 14  KELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGV 71

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
           C ++  + +V E++ NG L ++L      L      ++  D+  G+ +L+       +HR
Sbjct: 72  CSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHR 128

Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM---GYMAPECATTGKASKE 534
           D+ + N ++D +   K+ DFG+ R V      Q     GT     + APE     K S +
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLD---DQYVSSVGTKFPVKWSAPEVFHYFKYSSK 185

Query: 535 SDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD-------PRL 586
           SDV++FGI+  E+   G+ P                +DLY N +++  V        P L
Sbjct: 186 SDVWAFGILMWEVFSLGKMP----------------YDLYTNSEVVLKVSQGHRLYRPHL 229

Query: 587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
             D     I ++M     C H     RP+ +Q++  + 
Sbjct: 230 ASD----TIYQIM---YSCWHELPEKRPTFQQLLSSIE 260

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  164 bits (416), Expect = 1e-45
 Identities = 75/305 (24%), Positives = 128/305 (41%), Gaps = 41/305 (13%)

Query: 339 PKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFR----ETNSYIAVKRVSQGSKQGIK 394
           P  F  + L           +LG+G FG V    +      T + +AVK++        +
Sbjct: 17  PTIFEERHLKY-------ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR 69

Query: 395 EYASEVKIISRLRHRNLVQLLGWCHEKKE--LLLVYEFMPNGSLDSHLFKENSLLTWEFR 452
           ++  E++I+  L    +V+  G  +      L LV E++P+G L   L +  + L     
Sbjct: 70  DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL 129

Query: 453 YKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT 512
              +  +  G+ YL     +  VHRD+ + NI+++S  + KI DFGLA+L+   K     
Sbjct: 130 LLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV- 185

Query: 513 VLAGTMG-----YMAPECATTGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLL 566
                 G     + APE  +    S++SDV+SFG+V  E+     K  +P      + ++
Sbjct: 186 --VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSP--SAEFLRMM 241

Query: 567 QWVWDLYGNGKLLEAVD-------PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQV 619
               D+    +LLE ++       P  C      ++  LM     C  P    RPS   +
Sbjct: 242 GCERDVPALSRLLELLEEGQRLPAPPACPA----EVHELM---KLCWAPSPQDRPSFSAL 294

Query: 620 IHVLN 624
              L+
Sbjct: 295 GPQLD 299

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  162 bits (412), Expect = 1e-45
 Identities = 69/285 (24%), Positives = 126/285 (44%), Gaps = 43/285 (15%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSY-------IAVKRVSQGSKQGIKEYASEVKIISRLRHR 409
           ++ LGQG F  ++KG  RE   Y       + +K + +  +   + +     ++S+L H+
Sbjct: 13  NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
           +LV   G C    E +LV EF+  GSLD++L K  + +   ++ ++A+ LA+ + +L+  
Sbjct: 73  HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE-- 130

Query: 470 WEQCVVHRDIKSSNIMLDSNFN--------AKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
            E  ++H ++ + NI+L    +         K+ D G++  V      Q  +      ++
Sbjct: 131 -ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI-----PWV 184

Query: 522 APECATTGKA-SKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLL 579
            PEC    K  +  +D +SFG    EI   G KP+        +   +     Y +   L
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL------SALDSQR-KLQFYEDRHQL 237

Query: 580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
            A  P+         +  L+     C   + + RPS R +I  LN
Sbjct: 238 PA--PKAAE------LANLI---NNCMDYEPDHRPSFRAIIRDLN 271

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  162 bits (411), Expect = 2e-45
 Identities = 66/271 (24%), Positives = 126/271 (46%), Gaps = 28/271 (10%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           ++LG G FG V  G +R     +A+K + +GS     E+  E K++  L H  LVQL G 
Sbjct: 30  KELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGV 87

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
           C +++ + ++ E+M NG L ++L +       +   ++ +D+   + YL+    +  +HR
Sbjct: 88  CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 144

Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM---GYMAPECATTGKASKE 534
           D+ + N +++     K+ DFGL+R V      + T   G+     +  PE     K S +
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVL---DDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 201

Query: 535 SDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ 593
           SD+++FG++  EI   G+ P   +    +    + +      G  L    P L  +    
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPY-ERFTNSET--AEHI----AQGLRLYR--PHLASE---- 248

Query: 594 QIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           ++  +M     C H   + RP+ + ++  + 
Sbjct: 249 KVYTIM---YSCWHEKADERPTFKILLSNIL 276

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  162 bits (411), Expect = 2e-45
 Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 40/281 (14%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYI--AVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQ 413
           D +LG G FG V +G +R     I  A+K + QG  K   +E   E +I+ +L +  +V+
Sbjct: 15  DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC 473
           L+G C + + L+LV E    G L   L  +   +      ++   ++ G+ YL+E   + 
Sbjct: 75  LIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KN 130

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM--GYMAPECATTGKA 531
            VHRD+ + N++L +   AKI DFGL++ +       T   AG     + APEC    K 
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190

Query: 532 SKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD------- 583
           S  SDV+S+G+   E    G+KP                +      +++  ++       
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKP----------------YKKMKGPEVMAFIEQGKRMEC 234

Query: 584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           P  C      ++  LM     C       RP    V   + 
Sbjct: 235 PPECPP----ELYALM---SDCWIYKWEDRPDFLTVEQRMR 268

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  163 bits (414), Expect = 2e-45
 Identities = 64/284 (22%), Positives = 124/284 (43%), Gaps = 45/284 (15%)

Query: 357 DQKLGQGGFGGVYKGFFR----ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNL 411
            + LG G FG VYKG +     +    +A+K + +  S +  KE   E  +++ + + ++
Sbjct: 20  IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
            +LLG C     + L+ + MP G L  ++ +    +  ++       +A G+ YL++   
Sbjct: 80  CRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED--- 135

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM---GYMAPECATT 528
           + +VHRD+ + N+++ +  + KI DFGLA+L+      +     G      +MA E    
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILH 193

Query: 529 GKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD---- 583
              + +SDV+S+G+   E+   G KP                +D     ++   ++    
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKP----------------YDGIPASEISSILEKGER 237

Query: 584 ---PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
              P +C       +  +M     C   D + RP  R++I   +
Sbjct: 238 LPQPPICTI----DVYMIM---RKCWMIDADSRPKFRELIIEFS 274

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  162 bits (413), Expect = 2e-45
 Identities = 82/307 (26%), Positives = 139/307 (45%), Gaps = 44/307 (14%)

Query: 339 PKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFR----ETNSYIAVKRVSQGSKQGIK 394
           P +F  + L          Q+LG+G FG V    +      T   +AVK++   +++ ++
Sbjct: 35  PTQFEERHLKF-------LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 87

Query: 395 EYASEVKIISRLRHRNLVQLLGWCHEKKE--LLLVYEFMPNGSLDSHLFKENSLLTWEFR 452
           ++  E++I+  L+H N+V+  G C+      L L+ E++P GSL  +L K    +     
Sbjct: 88  DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 147

Query: 453 YKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT 512
            +    +  G+ YL     +  +HRD+ + NI++++    KIGDFGL +++   K     
Sbjct: 148 LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYK- 203

Query: 513 VLAGTMG-----YMAPECATTGKASKESDVYSFGIVALEIA-CGRKPINPKA-------- 558
                 G     + APE  T  K S  SDV+SFG+V  E+     K  +P A        
Sbjct: 204 --VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 261

Query: 559 -PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIR 617
             QGQ+ +   + +L  N   L    P  C D    +I  +M     C + + N RPS R
Sbjct: 262 DKQGQMIVFH-LIELLKNNGRLPR--PDGCPD----EIYMIM---TECWNNNVNQRPSFR 311

Query: 618 QVIHVLN 624
            +   ++
Sbjct: 312 DLALRVD 318

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  161 bits (410), Expect = 3e-45
 Identities = 67/283 (23%), Positives = 119/283 (42%), Gaps = 45/283 (15%)

Query: 357 DQKLGQGGFGGVYKGFFRETNS---YIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLV 412
           ++ LG+G FG VY+G +         +AVK   +  +    +++ SE  I+  L H ++V
Sbjct: 17  NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
           +L+G   E++   ++ E  P G L  +L +  + L        +  +   + YL+     
Sbjct: 77  KLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---I 132

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM---GYMAPECATTG 529
             VHRDI   NI++ S    K+GDFGL+R +E          + T     +M+PE     
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIE---DEDYYKASVTRLPIKWMSPESINFR 189

Query: 530 KASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD----- 583
           + +  SDV+ F +   EI   G++P                +    N  ++  ++     
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQP----------------FFWLENKDVIGVLEKGDRL 233

Query: 584 --PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
             P LC       +  LM     C   D + RP   +++  L+
Sbjct: 234 PKPDLCPP----VLYTLM---TRCWDYDPSDRPRFTELVCSLS 269

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  161 bits (410), Expect = 3e-45
 Identities = 72/285 (25%), Positives = 123/285 (43%), Gaps = 48/285 (16%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYI--AVK--RVSQGSKQGIKEYASEVKIISRLRHRNLV 412
           D++LG G FG V KG+++        AVK  +          E  +E  ++ +L +  +V
Sbjct: 22  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
           +++G C E +  +LV E    G L+ +L ++N  +  +   ++   ++ G+ YL+E    
Sbjct: 82  RMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---S 136

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECAT 527
             VHRD+ + N++L +   AKI DFGL++ +      +    A T G     + APEC  
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALR---ADENYYKAQTHGKWPVKWYAPECIN 193

Query: 528 TGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD--- 583
             K S +SDV+SFG++  E    G+KP                +      ++   ++   
Sbjct: 194 YYKFSSKSDVWSFGVLMWEAFSYGQKP----------------YRGMKGSEVTAMLEKGE 237

Query: 584 ----PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
               P  C      ++  LM     C   D   RP    V   L 
Sbjct: 238 RMGCPAGCPR----EMYDLM---NLCWTYDVENRPGFAAVELRLR 275

>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Length = 239

 Score =  159 bits (404), Expect = 3e-45
 Identities = 74/244 (30%), Positives = 120/244 (49%), Gaps = 21/244 (8%)

Query: 33  SALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL-------PANRETAGRATYNQSMRLW 84
             ++F+++ F P  +DN+T +  A    + V+QL           ++ GR  Y + + +W
Sbjct: 2   ETISFSFSEFEP-GNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMW 60

Query: 85  DKATGNLTDFTTHFSFVIDS-RNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPL 143
           D  TG +  F T FSF I+        ADGL FF+ P  +K    +G G  G+  +++  
Sbjct: 61  DSTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGP--TKSKPAQGYGYLGVFNNSKQD 118

Query: 144 NSSIPFVAVEFDVYVNSW-DPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSS 202
           NS    +AVEFD + N W  P   H+GID+NS++S K   +   + +G+     I Y++ 
Sbjct: 119 NSY-QTLAVEFDTFSNPWDPPQVPHIGIDVNSIRSIKTQPF--QLDNGQVANVVIKYDAP 175

Query: 203 THNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS---IYSWEF 259
           +  L V       +   +  +   VD++Q LP++V  G S ATG          +YSW F
Sbjct: 176 SKILHVVLVY--PSSGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSF 233

Query: 260 NSSL 263
            +SL
Sbjct: 234 QASL 237

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  162 bits (412), Expect = 4e-45
 Identities = 76/291 (26%), Positives = 130/291 (44%), Gaps = 48/291 (16%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSY---IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLV 412
           ++ +G G  G V  G  R        +A+K +  G +++  +++ SE  I+ +  H N++
Sbjct: 54  EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
           +L G     +  ++V E+M NGSLD+ L   +   T      + + + +G+ YL    + 
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DL 170

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECAT 527
             VHRD+ + N+++DSN   K+ DFGL+R++E            T G     + APE   
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE---DDPDAAYTTTGGKIPIRWTAPEAIA 227

Query: 528 TGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD--- 583
               S  SDV+SFG+V  E+   G +P                +    N  ++ +V+   
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERP----------------YWNMTNRDVISSVEEGY 271

Query: 584 ----PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN--FEAP 628
               P  C       + +LM   L C H D   RP   Q++ VL+    +P
Sbjct: 272 RLPAPMGCPH----ALHQLM---LDCWHKDRAQRPRFSQIVSVLDALIRSP 315

>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Length = 234

 Score =  159 bits (402), Expect = 6e-45
 Identities = 79/236 (33%), Positives = 123/236 (52%), Gaps = 13/236 (5%)

Query: 35  LTFNYTSFSPQYDDNITYERAYPDSNRVIQL-PANRETAGRATYNQSMRLWDKATGNLTD 93
            +F  T FSP    N+ ++     +   + L  A + T GRA Y+  + +WD+ TGN+ +
Sbjct: 4   TSFLITKFSPD-QQNLIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVAN 62

Query: 94  FTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVE 153
           F T F+FVI++ NS   ADG  FF+AP         GGG  G+  ++   + +   VAVE
Sbjct: 63  FVTSFTFVINAPNSYNVADGFTFFIAP--VDTKPQTGGGYLGVF-NSAEYDKTTQTVAVE 119

Query: 154 FDVYVNSW---DPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVAF 210
           FD + N+         H+GID+NS+KS    SW   +++G      I++N++T+ L+V+ 
Sbjct: 120 FDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKSW--KLQNGEEANVVIAFNAATNVLTVSL 177

Query: 211 T---GFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSL 263
           T         V    L   V L+  +PE+V  GFS  TG ++A   + SW F+S L
Sbjct: 178 TYPNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSEL 233

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  161 bits (410), Expect = 7e-45
 Identities = 84/318 (26%), Positives = 132/318 (41%), Gaps = 54/318 (16%)

Query: 332 EFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSY----IAVKRVSQ 387
            F+    P  F  + L          + LG+G FG V    +  TN      +AVK +  
Sbjct: 18  LFQGPGDPTVFHKRYLKK-------IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA 70

Query: 388 G-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE--LLLVYEFMPNGSLDSHL---- 440
               Q    +  E+ I+  L H ++++  G C +     L LV E++P GSL  +L    
Sbjct: 71  DAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS 130

Query: 441 FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA 500
                LL +      AQ +  G+ YL     Q  +HRD+ + N++LD++   KIGDFGLA
Sbjct: 131 IGLAQLLLF------AQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLA 181

Query: 501 RLVEHAKGSQTTVLAGTMG-----YMAPECATTGKASKESDVYSFGIVALEIA-CGRKPI 554
           + V               G     + APEC    K    SDV+SFG+   E+        
Sbjct: 182 KAVPEGHEYYR---VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 238

Query: 555 NPKA--------PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCA 606
           +P           QGQ+++L+ + +L   G+ L    P  C      ++  LM     C 
Sbjct: 239 SPPTKFLELIGIAQGQMTVLR-LTELLERGERLPR--PDKCPA----EVYHLM---KNCW 288

Query: 607 HPDENLRPSIRQVIHVLN 624
             + + RP+   +I +L 
Sbjct: 289 ETEASFRPTFENLIPILK 306

>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 240

 Score =  159 bits (402), Expect = 7e-45
 Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 29/255 (11%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL-------PANRETAGRATYNQSMRL 83
           A+  +FN+ +F    DD +  +  A   S   +QL           ++ GRA Y+  +++
Sbjct: 1   ATETSFNFPNFHT--DDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQI 58

Query: 84  WDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPL 143
            D  + N+  F T+F+F+I ++N S  A GLAF L P     P  K     G+   N P 
Sbjct: 59  KD--SNNVASFNTNFTFIIRAKNQSISAYGLAFALVP--VNSPPQKKQEFLGIFNTNNP- 113

Query: 144 NSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSST 203
             +   VAV F+ + N        +  D N +K   N +      +G + +  I+Y+SS 
Sbjct: 114 EPNARTVAVVFNTFKN-------RIDFDKNFIKPYVNENCDFHKYNGEKTDVQITYDSSN 166

Query: 204 HNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS---IYSWEFN 260
           ++L V          V   +   V L + + E+V+ GFS  +G+         + SW F+
Sbjct: 167 NDLRVFLHF--TVSQVKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDVLSWSFS 224

Query: 261 SSLEMDDETTNPVSN 275
           S     ++ +N + N
Sbjct: 225 SKFR--NKLSNILLN 237

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  160 bits (407), Expect = 1e-44
 Identities = 78/288 (27%), Positives = 126/288 (43%), Gaps = 37/288 (12%)

Query: 358 QKLGQGGFGGVYKGFFR----ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLV 412
           + LG+G FG V    +      T   +AVK +        I +   E++I+  L H N+V
Sbjct: 27  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86

Query: 413 QLLGWCHEKKE--LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           +  G C E     + L+ EF+P+GSL  +L K  + +  + + K A  +  G+ YL    
Sbjct: 87  KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS-- 144

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPEC 525
            +  VHRD+ + N++++S    KIGDFGL + +E  K   T             + APEC
Sbjct: 145 -RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYT---VKDDRDSPVFWYAPEC 200

Query: 526 ATTGKASKESDVYSFGIVALEIA-CGRKPINPKA--------PQGQVSLLQWVWDLYGNG 576
               K    SDV+SFG+   E+        +P A          GQ+++ + + +    G
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR-LVNTLKEG 259

Query: 577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           K L    P  C D    ++ +LM     C     + R S + +I    
Sbjct: 260 KRLPC--PPNCPD----EVYQLM---RKCWEFQPSNRTSFQNLIEGFE 298

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  162 bits (411), Expect = 1e-44
 Identities = 83/307 (27%), Positives = 140/307 (45%), Gaps = 50/307 (16%)

Query: 357 DQKLGQGGFGGVYKGFFR---ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLV 412
           D+ +G G FG V  G  +   +    +A+K +  G +++  +++  E  I+ +  H N++
Sbjct: 50  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
           +L G   + K +++V E+M NGSLDS L K ++  T      + + +ASG+ YL    + 
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DM 166

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECAT 527
             VHRD+ + NI+++SN   K+ DFGL R++E              G     + +PE   
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLE---DDPEAAYTTRGGKIPIRWTSPEAIA 223

Query: 528 TGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD--- 583
             K +  SDV+S+GIV  E+   G +P                +    N  +++AVD   
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP----------------YWEMSNQDVIKAVDEGY 267

Query: 584 ----PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN--FEAP--LPALPPK 635
               P  C       + +LM   L C   D N RP   Q++ +L+     P  L  +   
Sbjct: 268 RLPPPMDCPA----ALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320

Query: 636 MPVPTYL 642
              P+ L
Sbjct: 321 AARPSNL 327

>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Length = 238

 Score =  157 bits (398), Expect = 2e-44
 Identities = 80/247 (32%), Positives = 117/247 (47%), Gaps = 25/247 (10%)

Query: 35  LTFNYTSFSPQYDDNITYER-AYPDSNRVIQL-------PANRETAGRATYNQSMRLWDK 86
            +FN+  F       +  +R A   SN V++L           ++ GRA Y + +++WD 
Sbjct: 3   QSFNFDHFEE-NSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDS 61

Query: 87  ATGNLTDFTTHFSFVIDS-RNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNS 145
            TGN+  F T FSF I         ADGL FF+ P  S  P  + GG+ G+ K       
Sbjct: 62  TTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNS--PQGEDGGNLGVFKPP----E 115

Query: 146 SIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHN 205
                AVEFD + N+WDP   H+GID+NS+ S K + +   +++G      I Y+S T  
Sbjct: 116 GDNAFAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHF--QLENGGVANVVIKYDSPTKI 173

Query: 206 LSVAFTGFRNNLVVMQGLDYQVDLRQHLP--EFVTFGFSMATGVDFAIFS---IYSWEFN 260
           L+V      +++  +  L   VDL+Q  P  E+V  G S  TG          I SW F 
Sbjct: 174 LNVVLAF--HSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFT 231

Query: 261 SSLEMDD 267
           SSL+  +
Sbjct: 232 SSLQETN 238

>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Length = 223

 Score =  157 bits (397), Expect = 2e-44
 Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 38/249 (15%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL-PANRETAGRATYNQSMRLWDKATG 89
           A+  +F   +F+     N+  +  A   SN  +QL   + ++  RA Y+  +++ D  TG
Sbjct: 1   ATETSFIIDAFNK---TNLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTG 57

Query: 90  NLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPF 149
           N+  F T+F+  I +   +  A GL F L P                        S    
Sbjct: 58  NVASFDTNFTMNIRTHRQANSAVGLDFVLVPVQP--------------------ESKGDT 97

Query: 150 VAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVA 209
           V VEFD +++        + ID+N+    K+V W      G+  E  I+YNSST   SV+
Sbjct: 98  VTVEFDTFLS-------RISIDVNNNDI-KSVPWDVHDYDGQNAEVRITYNSSTKVFSVS 149

Query: 210 FTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV---DFAIFSIYSWEFNSSLEMD 266
            +           +   V+L + + ++V+ GFS  +G     +    + SW F+S     
Sbjct: 150 LSNPSTG--KSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLSWSFSSKFINL 207

Query: 267 DETTNPVSN 275
            +  +  SN
Sbjct: 208 KDQKSERSN 216

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  159 bits (405), Expect = 4e-44
 Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 48/291 (16%)

Query: 358 QKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLV 412
            +LG+G FG V+          +    +AVK + + S+   +++  E ++++ L+H+++V
Sbjct: 47  WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV 106

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHL--------------FKENSLLTWEFRYKIAQD 458
           +  G C E + LL+V+E+M +G L+  L                    L       +A  
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166

Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM 518
           +A+G++YL        VHRD+ + N ++      KIGDFG++R +     S      G  
Sbjct: 167 VAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY----STDYYRVGGR 219

Query: 519 G-----YMAPECATTGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDL 572
                 +M PE     K + ESDV+SFG+V  EI   G++P        Q+S  +   D 
Sbjct: 220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW------YQLSNTE-AIDC 272

Query: 573 YGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
              G+ LE   PR C      ++  +M     C   +   R SI+ V   L
Sbjct: 273 ITQGRELER--PRACPP----EVYAIM---RGCWQREPQQRHSIKDVHARL 314

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  159 bits (404), Expect = 5e-44
 Identities = 85/343 (24%), Positives = 136/343 (39%), Gaps = 59/343 (17%)

Query: 324 GFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFR-----ETNS 378
           G +  I D  E        P K + L        + LG G FG VY+G         +  
Sbjct: 16  GKTSSISDLKE-------VPRKNITL-------IRGLGHGAFGEVYEGQVSGMPNDPSPL 61

Query: 379 YIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
            +AVK + +  S+Q   ++  E  IIS+  H+N+V+ +G   +     ++ E M  G L 
Sbjct: 62  QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLK 121

Query: 438 SHL------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD---S 488
           S L        + S L       +A+D+A G  YL+   E   +HRDI + N +L     
Sbjct: 122 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGP 178

Query: 489 NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGY-----MAPECATTGKASKESDVYSFGIV 543
              AKIGDFG+AR +   + S      G         M PE    G  + ++D +SFG++
Sbjct: 179 GRVAKIGDFGMARDIY--RASYYRK--GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 234

Query: 544 ALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVG 602
             EI   G  P          S  + V +   +G  ++   P+ C       + R+M   
Sbjct: 235 LWEIFSLGYMPY-----PS-KSNQE-VLEFVTSGGRMDP--PKNCPG----PVYRIM--- 278

Query: 603 LWCAHPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTYLSPP 645
             C       RP+   ++  + +    P +     +P    P 
Sbjct: 279 TQCWQHQPEDRPNFAIILERIEYCTQDPDV-INTALPIEYGPL 320

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  158 bits (401), Expect = 5e-44
 Identities = 67/288 (23%), Positives = 116/288 (40%), Gaps = 47/288 (16%)

Query: 358 QKLGQGGFGGVYKGFFRETNS---YIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQ 413
           + +G+G FG V++G +    +    +A+K      S    +++  E   + +  H ++V+
Sbjct: 21  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC 473
           L+G    +  + ++ E    G L S L      L        A  L++ L YL+    + 
Sbjct: 81  LIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KR 136

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM---GYMAPECATTGK 530
            VHRDI + N+++ SN   K+GDFGL+R +E    S     +       +MAPE     +
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED---STYYKASKGKLPIKWMAPESINFRR 193

Query: 531 ASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD------ 583
            +  SDV+ FG+   EI   G KP                +    N  ++  ++      
Sbjct: 194 FTSASDVWMFGVCMWEILMHGVKP----------------FQGVKNNDVIGRIENGERLP 237

Query: 584 -PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN--FEAP 628
            P  C       +  LM     C   D + RP   ++   L+   E  
Sbjct: 238 MPPNCPP----TLYSLM---TKCWAYDPSRRPRFTELKAQLSTILEEE 278

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  158 bits (403), Expect = 6e-44
 Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 58/317 (18%)

Query: 328 YIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAV 382
           Y+ DE+E          +++ +        ++LGQG FG VY+G  +     E  + +A+
Sbjct: 15  YVPDEWE-------VAREKITM-------SRELGQGSFGMVYEGVAKGVVKDEPETRVAI 60

Query: 383 KRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL- 440
           K V++  S +   E+ +E  ++      ++V+LLG   + +  L++ E M  G L S+L 
Sbjct: 61  KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 120

Query: 441 --------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
                       +  +     ++A ++A G+ YL        VHRD+ + N M+  +F  
Sbjct: 121 SLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTV 177

Query: 493 KIGDFGLARLVEHAKGSQTTVLAGTMGY-----MAPECATTGKASKESDVYSFGIVALEI 547
           KIGDFG+ R +            G  G      M+PE    G  +  SDV+SFG+V  EI
Sbjct: 178 KIGDFGMTRDIY----ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233

Query: 548 A-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCA 606
           A    +P      QG +S  Q V      G LL+   P  C D     +  LM     C 
Sbjct: 234 ATLAEQPY-----QG-LSNEQ-VLRFVMEGGLLDK--PDNCPD----MLFELM---RMCW 277

Query: 607 HPDENLRPSIRQVIHVL 623
             +  +RPS  ++I  +
Sbjct: 278 QYNPKMRPSFLEIISSI 294

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  163 bits (414), Expect = 7e-44
 Identities = 71/268 (26%), Positives = 131/268 (48%), Gaps = 22/268 (8%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
            KLG G +G VY+G +++ +  +AVK + + + + ++E+  E  ++  ++H NLVQLLG 
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 284

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
           C  +    ++ EFM  G+L  +L + N   ++      +A  ++S + YL+   ++  +H
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 341

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           R++ + N ++  N   K+ DFGL+RL+     +        + + APE     K S +SD
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 401

Query: 537 VYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQI 595
           V++FG++  EIA  G  P  P     QV   + +         +E   P  C +    ++
Sbjct: 402 VWAFGVLLWEIATYGMSP-YPGIDLSQV--YELL----EKDYRMER--PEGCPE----KV 448

Query: 596 ERLMIVGLWCAHPDENLRPSIRQVIHVL 623
             LM     C   + + RPS  ++    
Sbjct: 449 YELM---RACWQWNPSDRPSFAEIHQAF 473

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  157 bits (400), Expect = 8e-44
 Identities = 76/271 (28%), Positives = 134/271 (49%), Gaps = 28/271 (10%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
            KLG G +G VY+G +++ +  +AVK + + + + ++E+  E  ++  ++H NLVQLLG 
Sbjct: 19  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
           C  +    ++ EFM  G+L  +L + N   ++      +A  ++S + YL+   ++  +H
Sbjct: 78  CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT---MGYMAPECATTGKASK 533
           RD+ + N ++  N   K+ DFGL+RL+    G   T  AG    + + APE     K S 
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSI 191

Query: 534 ESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDG 592
           +SDV++FG++  EIA  G  P  P     QV   + +         +E   P  C +   
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPY-PGIDLSQV--YELL----EKDYRMER--PEGCPE--- 239

Query: 593 QQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
            ++  LM     C   + + RPS  ++    
Sbjct: 240 -KVYELM---RACWQWNPSDRPSFAEIHQAF 266

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  158 bits (401), Expect = 1e-43
 Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 35/280 (12%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRV---SQGSKQGIKEYASEVKIISRLRH 408
            +F  ++K+G+G F  VY+         +A+K+V        +   +   E+ ++ +L H
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---------FKENSLLTWEFRYKIAQDL 459
            N+++      E  EL +V E    G L   +           E ++  +       Q L
Sbjct: 92  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY-----FVQ-L 145

Query: 460 ASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG 519
            S L ++     + V+HRDIK +N+ + +    K+GD GL R       +  +++ GT  
Sbjct: 146 CSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPY 201

Query: 520 YMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL 579
           YM+PE       + +SD++S G +  E+A  + P          SL +         K+ 
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-MNLYSLCK---------KIE 251

Query: 580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQV 619
           +   P L  D   +++ +L+     C +PD   RP +  V
Sbjct: 252 QCDYPPLPSDHYSEELRQLV---NMCINPDPEKRPDVTYV 288

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  157 bits (400), Expect = 1e-43
 Identities = 77/290 (26%), Positives = 137/290 (47%), Gaps = 45/290 (15%)

Query: 358 QKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLV 412
           ++LG+G FG V+          +    +AVK +   +    K++  E ++++ L+H ++V
Sbjct: 21  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHL---------------FKENSLLTWEFRYKIAQ 457
           +  G C +   L++V+E+M +G L+  L                +    L       IA 
Sbjct: 81  KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140

Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT 517
            +ASG++YL     Q  VHRD+ + N ++ +N   KIGDFG++R V         V   T
Sbjct: 141 QIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVY--STDYYRVGGHT 195

Query: 518 M---GYMAPECATTGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLY 573
           M    +M PE     K + ESDV+SFG++  EI   G++P   +    +V  ++ +    
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPW-FQLSNTEV--IECI---- 248

Query: 574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
             G++LE   PR+C      ++  +M   L C   +   R +I+++  +L
Sbjct: 249 TQGRVLER--PRVCPK----EVYDVM---LGCWQREPQQRLNIKEIYKIL 289

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  159 bits (404), Expect = 1e-43
 Identities = 74/279 (26%), Positives = 123/279 (44%), Gaps = 32/279 (11%)

Query: 357 DQKLGQGGFGGVYKGFFRETNS---YIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLV 412
           ++ +G+G FG VY G   + +    + AVK +++      + ++ +E  I+    H N++
Sbjct: 94  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153

Query: 413 QLLGWCHEKKE-LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
            LLG C   +   L+V  +M +G L + +  E    T +        +A G+ +L     
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS--- 210

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECA 526
           +  VHRD+ + N MLD  F  K+ DFGLAR +        +V   T       +MA E  
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMY--DKEFDSVHNKTGAKLPVKWMALESL 268

Query: 527 TTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR 585
            T K + +SDV+SFG++  E+   G  P            L         G+ L    P 
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-------QGRRLLQ--PE 319

Query: 586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
            C D     +  +M   L C HP   +RPS  +++  ++
Sbjct: 320 YCPD----PLYEVM---LKCWHPKAEMRPSFSELVSRIS 351

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  157 bits (398), Expect = 2e-43
 Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 32/279 (11%)

Query: 357 DQKLGQGGFGGVYKGFFR---ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLV 412
           D+ +G+G FG VY G +    +     A+K +S+    Q ++ +  E  ++  L H N++
Sbjct: 26  DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85

Query: 413 QLLGWCHEKKE-LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
            L+G     +    ++  +M +G L   +       T +        +A G+ YL E   
Sbjct: 86  ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE--- 142

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECA 526
           Q  VHRD+ + N MLD +F  K+ DFGLAR +        +V           + A E  
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILD--REYYSVQQHRHARLPVKWTALESL 200

Query: 527 TTGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR 585
            T + + +SDV+SFG++  E+   G  P     P      L         G+ L    P 
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-------QGRRLPQ--PE 251

Query: 586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
            C D     + ++M     C   D  +RP+ R ++  + 
Sbjct: 252 YCPD----SLYQVM---QQCWEADPAVRPTFRVLVGEVE 283

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  157 bits (399), Expect = 2e-43
 Identities = 67/307 (21%), Positives = 131/307 (42%), Gaps = 47/307 (15%)

Query: 357 DQKLGQGGFGGVYKGFFR----ETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNL 411
            + LG G FG VYKG +     +    +A+K + + +  +  KE   E  +++ + + ++
Sbjct: 20  IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
            +LLG C     + L+ + MP G L  ++ +    +  ++       +A G+ YL++   
Sbjct: 80  CRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED--- 135

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM---GYMAPECATT 528
           + +VHRD+ + N+++ +  + KI DFGLA+L+      +     G      +MA E    
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILH 193

Query: 529 GKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD---- 583
              + +SDV+S+G+   E+   G KP                +D     ++   ++    
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKP----------------YDGIPASEISSILEKGER 237

Query: 584 ---PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN--FEAPLPALPPKMPV 638
              P +C       +  +M   + C   D + RP  R++I   +     P   L  +   
Sbjct: 238 LPQPPICTI----DVYMIM---VKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 290

Query: 639 PTYLSPP 645
             +L  P
Sbjct: 291 RMHLPSP 297

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  156 bits (397), Expect = 2e-43
 Identities = 75/279 (26%), Positives = 122/279 (43%), Gaps = 32/279 (11%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSY---IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLV 412
           ++ +G+G FG VY G   + +      AVK +++      + ++ +E  I+    H N++
Sbjct: 30  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89

Query: 413 QLLGWCHEKKE-LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
            LLG C   +   L+V  +M +G L + +  E    T +        +A G+ YL     
Sbjct: 90  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS--- 146

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECA 526
           +  VHRD+ + N MLD  F  K+ DFGLAR +        +V   T       +MA E  
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMY--DKEYYSVHNKTGAKLPVKWMALESL 204

Query: 527 TTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR 585
            T K + +SDV+SFG++  E+   G  P            L         G+ L    P 
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-------QGRRLLQ--PE 255

Query: 586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
            C D     +  +M   L C HP   +RPS  +++  ++
Sbjct: 256 YCPD----PLYEVM---LKCWHPKAEMRPSFSELVSRIS 287

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  155 bits (395), Expect = 4e-43
 Identities = 69/284 (24%), Positives = 110/284 (38%), Gaps = 44/284 (15%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSY---IAVKRVSQG---SKQGIKEYASEVKIISRLRHRN 410
            +KLG G FG V +G +   +     +AVK +        + + ++  EV  +  L HRN
Sbjct: 23  LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           L++L G       + +V E  P GSL   L K           + A  +A G+ YL+   
Sbjct: 83  LIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES-- 139

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGY--MAPECATT 528
            +  +HRD+ + N++L +    KIGDFGL R +              + +   APE   T
Sbjct: 140 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198

Query: 529 GKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD---- 583
              S  SD + FG+   E+   G++P                W      ++L  +D    
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEP----------------WIGLNGSQILHKIDKEGE 242

Query: 584 ----PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
               P  C       I  +M   + C       RP+   +   L
Sbjct: 243 RLPRPEDCPQ----DIYNVM---VQCWAHKPEDRPTFVALRDFL 279

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  155 bits (394), Expect = 4e-43
 Identities = 89/306 (29%), Positives = 135/306 (44%), Gaps = 54/306 (17%)

Query: 327 EYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS 386
           E+    +           KEL L        Q +G+G FG V  G +R     +AVK + 
Sbjct: 10  EFYRSGWA-------LNMKELKL-------LQTIGKGEFGDVMLGDYRGNK--VAVKCIK 53

Query: 387 QGSKQGIKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSLDSHL-FKEN 444
             +    + + +E  ++++LRH NLVQLLG    EK  L +V E+M  GSL  +L  +  
Sbjct: 54  NDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR 111

Query: 445 SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE 504
           S+L  +   K + D+   + YL+       VHRD+ + N+++  +  AK+ DFGL +   
Sbjct: 112 SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168

Query: 505 HAKGSQTTVLAGTMG-----YMAPECATTGKASKESDVYSFGIVALEIA-CGRKPINPKA 558
             +           G     + APE     K S +SDV+SFGI+  EI   GR P  P+ 
Sbjct: 169 STQ---------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY-PRI 218

Query: 559 PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQ 618
           P   V  +  V      G  ++A  P  C       +  +M     C H D  +RPS  Q
Sbjct: 219 PLKDV--VPRV----EKGYKMDA--PDGCPP----AVYEVM---KNCWHLDAAMRPSFLQ 263

Query: 619 VIHVLN 624
           +   L 
Sbjct: 264 LREQLE 269

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  157 bits (398), Expect = 9e-43
 Identities = 86/343 (25%), Positives = 137/343 (39%), Gaps = 59/343 (17%)

Query: 324 GFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFR-----ETNS 378
           G +  I D  E        P K + L        + LG G FG VY+G         +  
Sbjct: 57  GKTSSISDLKE-------VPRKNITLI-------RGLGHGAFGEVYEGQVSGMPNDPSPL 102

Query: 379 YIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLD 437
            +AVK + +  S+Q   ++  E  IIS+  H+N+V+ +G   +     ++ E M  G L 
Sbjct: 103 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 162

Query: 438 SHL------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD---S 488
           S L        + S L       +A+D+A G  YL+   E   +HRDI + N +L     
Sbjct: 163 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGP 219

Query: 489 NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGY-----MAPECATTGKASKESDVYSFGIV 543
              AKIGDFG+AR +   +        G         M PE    G  + ++D +SFG++
Sbjct: 220 GRVAKIGDFGMARDIY--RAGYYRK--GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 275

Query: 544 ALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVG 602
             EI   G  P  P     +V  L++V      G  ++   P+ C       + R+M   
Sbjct: 276 LWEIFSLGYMPY-PSKSNQEV--LEFVTS----GGRMDP--PKNCPG----PVYRIM--- 319

Query: 603 LWCAHPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTYLSPP 645
             C       RP+   ++  + +    P +     +P    P 
Sbjct: 320 TQCWQHQPEDRPNFAIILERIEYCTQDPDV-INTALPIEYGPL 361

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  153 bits (388), Expect = 3e-42
 Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 30/272 (11%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           ++LG G FG V+ G++      +AVK + QGS      + +E  ++ +L+H+ LV+L   
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 76

Query: 418 CHEKKELLLVYEFMPNGSLDSHL-FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
              ++ + ++ E+M NGSL   L       LT      +A  +A G+ +++E   +  +H
Sbjct: 77  V-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIH 132

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM---GYMAPECATTGKASK 533
           RD++++NI++    + KI DFGLARL+E    ++ T   G      + APE    G  + 
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIE---DNEYTAREGAKFPIKWTAPEAINYGTFTI 189

Query: 534 ESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDG 592
           +SDV+SFGI+  EI   GR P  P     +V  +Q +      G  +    P  C +   
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPY-PGMTNPEV--IQNL----ERGYRMVR--PDNCPE--- 237

Query: 593 QQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
            ++ +LM     C       RP+   +  VL 
Sbjct: 238 -ELYQLM---RLCWKERPEDRPTFDYLRSVLE 265

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  154 bits (390), Expect = 3e-42
 Identities = 73/303 (24%), Positives = 120/303 (39%), Gaps = 58/303 (19%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN 410
            +DF +   LGQG FG V K      + Y A+K++   +++ +    SEV +++ L H+ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQY 63

Query: 411 LVQLLG-WCHE------------KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQ 457
           +V+    W               K  L +  E+  NG+L   +  EN     +  +++ +
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123

Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH------------ 505
            +   L Y+     Q ++HRD+K  NI +D + N KIGDFGLA+ V              
Sbjct: 124 QILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180

Query: 506 -AKGSQTTVLAGTMGYMAPE-CATTGKASKESDVYSFGIVALEIACG------RKPINPK 557
                  T   GT  Y+A E    TG  +++ D+YS GI+  E+         R  I  K
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKK 240

Query: 558 APQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIR 617
                +       D             ++ +      I  L+         D N RP  R
Sbjct: 241 LRSVSIEFPPDFDDNK----------MKVEKKI----IRLLIDH-------DPNKRPGAR 279

Query: 618 QVI 620
            ++
Sbjct: 280 TLL 282

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  157 bits (400), Expect = 3e-42
 Identities = 91/309 (29%), Positives = 137/309 (44%), Gaps = 44/309 (14%)

Query: 318 DEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETN 377
            E       E+    +           KEL L        Q +G+G FG V  G +R   
Sbjct: 173 MEGTVAAQDEFYRSGWA-------LNMKELKL-------LQTIGKGEFGDVMLGDYRGNK 218

Query: 378 SYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYEFMPNGSL 436
             +AVK +   +    + + +E  ++++LRH NLVQLLG    EK  L +V E+M  GSL
Sbjct: 219 --VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274

Query: 437 DSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
             +L     S+L  +   K + D+   + YL+       VHRD+ + N+++  +  AK+ 
Sbjct: 275 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVS 331

Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA-CGRKPI 554
           DFGL +  E +    T  L   + + APE     K S +SDV+SFGI+  EI   GR P 
Sbjct: 332 DFGLTK--EASSTQDTGKLP--VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP- 386

Query: 555 NPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRP 614
            P+ P   V  +  V      G  ++A  P  C       +  +M     C H D   RP
Sbjct: 387 YPRIPLKDV--VPRV----EKGYKMDA--PDGCPP----AVYDVM---KNCWHLDAATRP 431

Query: 615 SIRQVIHVL 623
           +  Q+   L
Sbjct: 432 TFLQLREQL 440

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  160 bits (406), Expect = 4e-42
 Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 40/281 (14%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYI--AVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQ 413
           D +LG G FG V +G +R     I  A+K + QG  K   +E   E +I+ +L +  +V+
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 400

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC 473
           L+G C + + L+LV E    G L   L  +   +      ++   ++ G+ YL+E   + 
Sbjct: 401 LIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KN 456

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGY--MAPECATTGKA 531
            VHR++ + N++L +   AKI DFGL++ +       T   AG       APEC    K 
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516

Query: 532 SKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD------- 583
           S  SDV+S+G+   E    G+KP                +      +++  ++       
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQKP----------------YKKMKGPEVMAFIEQGKRMEC 560

Query: 584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           P  C      ++  LM     C       RP    V   + 
Sbjct: 561 PPECPP----ELYALM---SDCWIYKWEDRPDFLTVEQRMR 594

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  154 bits (391), Expect = 4e-42
 Identities = 71/307 (23%), Positives = 131/307 (42%), Gaps = 47/307 (15%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYI----AVKRVSQGS-KQGIKEYASEVKIISRLRHRNL 411
            + LG G FG V+KG +      I     +K +   S +Q  +     +  I  L H ++
Sbjct: 18  LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           V+LLG C     L LV +++P GSL  H+ +    L  +        +A G+ YL+E   
Sbjct: 78  VRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE--- 133

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM---GYMAPECATT 528
             +VHR++ + N++L S    ++ DFG+A L+      +  + +       +MA E    
Sbjct: 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLP--PDDKQLLYSEAKTPIKWMALESIHF 191

Query: 529 GKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD---- 583
           GK + +SDV+S+G+   E+   G +P                +      ++ + ++    
Sbjct: 192 GKYTHQSDVWSYGVTVWELMTFGAEP----------------YAGLRLAEVPDLLEKGER 235

Query: 584 ---PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN--FEAPLPALPPKMPV 638
              P++C       +  +M   + C   DEN+RP+ +++ +        P   L  K   
Sbjct: 236 LAQPQICTI----DVYMVM---VKCWMIDENIRPTFKELANEFTRMARDPPRYLVIKRES 288

Query: 639 PTYLSPP 645
              ++P 
Sbjct: 289 GPGIAPG 295

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  154 bits (390), Expect = 5e-42
 Identities = 65/307 (21%), Positives = 115/307 (37%), Gaps = 45/307 (14%)

Query: 358 QKLGQGGFGGVYKGFFRETNSY---IAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLV 412
           + LG+G FG V +   ++ +     +AVK +     +   I+E+  E   +    H ++ 
Sbjct: 29  RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88

Query: 413 QLLGWC------HEKKELLLVYEFMPNGSLDSHL-----FKENSLLTWEFRYKIAQDLAS 461
           +L+G              +++  FM +G L + L      +    L  +   +   D+A 
Sbjct: 89  KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-- 519
           G+ YL     +  +HRD+ + N ML  +    + DFGL+R +     S      G     
Sbjct: 149 GMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIY----SGDYYRQGCASKL 201

Query: 520 ---YMAPECATTGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGN 575
              ++A E       +  SDV++FG+   EI   G+ P          + L         
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI-------G 254

Query: 576 GKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPALPPK 635
           G  L+   P  C +    ++  LM     C   D   RPS   +   L       ++   
Sbjct: 255 GNRLKQ--PPECME----EVYDLM---YQCWSADPKQRPSFTCLRMELENILGHLSVLST 305

Query: 636 MPVPTYL 642
              P Y+
Sbjct: 306 SQDPLYI 312

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  153 bits (388), Expect = 6e-42
 Identities = 72/285 (25%), Positives = 108/285 (37%), Gaps = 30/285 (10%)

Query: 339 PKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEY 396
           P   P +  +     F    +LG G +G V+K   +E     AVKR        +     
Sbjct: 44  PGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARK 103

Query: 397 ASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFR-YK 454
            +EV    ++ +H   V+L     E   L L  E     SL  H     + L  E + + 
Sbjct: 104 LAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLP-EAQVWG 161

Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
             +D    L +L     Q +VH D+K +NI L      K+GDFGL   +  A   +    
Sbjct: 162 YLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE- 217

Query: 515 AGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG 574
            G   YMAPE    G     +DV+S G+  LE+AC  +   P   +G        W    
Sbjct: 218 -GDPRYMAPE-LLQGSYGTAADVFSLGLTILEVACNMEL--PHGGEG--------WQQLR 265

Query: 575 NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQV 619
            G L       L  +   + +  +M+       PD  LR +   +
Sbjct: 266 QGYLPPEFTAGLSSEL--RSVLVMML------EPDPKLRATAEAL 302

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  152 bits (387), Expect = 6e-42
 Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 18/235 (7%)

Query: 326 SEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRV 385
           S    +E +  +    + Y+      ++  D   LG+G +G VY G        IA+K +
Sbjct: 1   SMRSTEEGDCESDLLEYDYE-----YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEI 55

Query: 386 SQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-FKEN 444
            +   +  +    E+ +   L+H+N+VQ LG   E   + +  E +P GSL + L  K  
Sbjct: 56  PERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG 115

Query: 445 SLLTWE--FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLAR 501
            L   E    +   Q L  GL YL    +  +VHRDIK  N+++++ +   KI DFG ++
Sbjct: 116 PLKDNEQTIGFYTKQIL-EGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSK 171

Query: 502 LVEHAKGSQTTVLAGTMGYMAPE---CATTGKASKESDVYSFGIVALEIACGRKP 553
            +        T   GT+ YMAPE       G     +D++S G   +E+A G+ P
Sbjct: 172 RLAGINPCTETF-TGTLQYMAPEIIDKGPRGYGKA-ADIWSLGCTIIEMATGKPP 224

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  154 bits (390), Expect = 8e-42
 Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 19/211 (9%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHR 409
             +   QK+G+G FG        E      +K ++    S +  +E   EV +++ ++H 
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHL-------FKENSLLTWEFRYKIAQDLASG 462
           N+VQ      E   L +V ++   G L   +       F+E+ +L W       Q +   
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW-----FVQ-ICLA 137

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
           L ++ +   + ++HRDIKS NI L  +   ++GDFG+AR++            GT  Y++
Sbjct: 138 LKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC-IGTPYYLS 193

Query: 523 PECATTGKASKESDVYSFGIVALEIACGRKP 553
           PE       + +SD+++ G V  E+   +  
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCTLKHA 224

>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Length = 243

 Score =  150 bits (379), Expect = 1e-41
 Identities = 74/245 (30%), Positives = 112/245 (45%), Gaps = 20/245 (8%)

Query: 33  SALTFNYTSFSP---QYDDNITYERAYPDSNRVIQLPANRE-------TAGRATYNQSMR 82
           + + F Y  F     +    IT+          +QL            +AG+A+Y++ + 
Sbjct: 2   NTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVF 61

Query: 83  LWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEP 142
           LWD +TG    F T F+F++ +  +   ADGLAFFLAP  S +    GG       +   
Sbjct: 62  LWD-STGKAASFYTSFTFLLKNYGAPT-ADGLAFFLAPVDSSVKD-YGGFLGLFRHETAA 118

Query: 143 LNSSIPFVAVEFDVYVNS--WDPTFSHVGIDINSVKSKKNVSW-WSDVKSGRRNEAWISY 199
             S    VAVEFD ++N    DP + H+GID+NS+ S     W   D        A I+Y
Sbjct: 119 DPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTRWENDDAYGSSIATAHITY 178

Query: 200 NSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEF 259
           ++ +  L+V  +       +   L + VDL + LP+ V  GFS   G    +  I SW F
Sbjct: 179 DARSKILTVLLSYEHGRDYI---LSHVVDLAKVLPQKVRIGFSAGVGY-DEVTYILSWHF 234

Query: 260 NSSLE 264
            S+L+
Sbjct: 235 FSTLD 239

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  152 bits (385), Expect = 2e-41
 Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 44/288 (15%)

Query: 358 QKLGQGGFGGVYKGFFRETNSY---IAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLV 412
           + LG+G FG V +G  ++ +     +AVK +     S++ I+E+ SE   +    H N++
Sbjct: 40  KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99

Query: 413 QLLGWC-----HEKKELLLVYEFMPNGSLDSHLFK-----ENSLLTWEFRYKIAQDLASG 462
           +LLG C         + +++  FM  G L ++L           +  +   K   D+A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG--- 519
           + YL     +  +HRD+ + N ML  +    + DFGL++ +     S      G +    
Sbjct: 160 MEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIY----SGDYYRQGRIAKMP 212

Query: 520 --YMAPECATTGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNG 576
             ++A E       + +SDV++FG+   EIA  G  P       G V   + ++D   +G
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY-----PG-VQNHE-MYDYLLHG 265

Query: 577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
             L+   P  C D    ++  +M     C   D   RP+   +   L 
Sbjct: 266 HRLKQ--PEDCLD----ELYEIM---YSCWRTDPLDRPTFSVLRLQLE 304

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  151 bits (383), Expect = 2e-41
 Identities = 70/294 (23%), Positives = 119/294 (40%), Gaps = 50/294 (17%)

Query: 358 QKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNL 411
           ++LG+  FG VYKG        E    +A+K +         +E+  E  + +RL+H N+
Sbjct: 15  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHL---------------FKENSLLTWEFRYKIA 456
           V LLG   + + L +++ +  +G L   L                   S L       + 
Sbjct: 75  VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134

Query: 457 QDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG 516
             +A+G+ YL       VVH+D+ + N+++    N KI D GL R V     +       
Sbjct: 135 AQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVY----AADYYKLL 187

Query: 517 TMG-----YMAPECATTGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVW 570
                   +MAPE    GK S +SD++S+G+V  E+   G +P         V  ++ + 
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY-CGYSNQDV--VEMI- 243

Query: 571 DLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
               N ++L    P  C       +  LM   + C +   + RP  + +   L 
Sbjct: 244 ---RNRQVLPC--PDDCPA----WVYALM---IECWNEFPSRRPRFKDIHSRLR 285

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  155 bits (393), Expect = 2e-41
 Identities = 81/269 (30%), Positives = 127/269 (47%), Gaps = 24/269 (8%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
            KLGQG FG V+ G +  T   +A+K +  G+    + +  E +++ +LRH  LVQL   
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAV 247

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
             E+  + +V E+M  GSL   L  E    L       +A  +ASG+ Y++       VH
Sbjct: 248 VSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 303

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           RD++++NI++  N   K+ DFGLARL+E  + +        + + APE A  G+ + +SD
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363

Query: 537 VYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQI 595
           V+SFGI+  E+   GR P  P     +V  L  V      G  +    P  C +     +
Sbjct: 364 VWSFGILLTELTTKGRVP-YPGMVNREV--LDQV----ERGYRMPC--PPECPE----SL 410

Query: 596 ERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
             LM     C   +   RP+   +   L 
Sbjct: 411 HDLM---CQCWRKEPEERPTFEYLQAFLE 436

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  155 bits (393), Expect = 2e-41
 Identities = 73/272 (26%), Positives = 130/272 (47%), Gaps = 30/272 (11%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           +KLG G FG V+   + +    +AVK +  GS    + + +E  ++  L+H  LV+L   
Sbjct: 194 KKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAV 251

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
              K+ + ++ EFM  GSL   L   E S          +  +A G+ ++++   +  +H
Sbjct: 252 V-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIH 307

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG---YMAPECATTGKASK 533
           RD++++NI++ ++   KI DFGLAR++E    ++ T   G      + APE    G  + 
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIE---DNEYTAREGAKFPIKWTAPEAINFGSFTI 364

Query: 534 ESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDG 592
           +SDV+SFGI+ +EI   GR P  P     +V  ++ +      G  +    P  C +   
Sbjct: 365 KSDVWSFGILLMEIVTYGRIP-YPGMSNPEV--IRAL----ERGYRMPR--PENCPE--- 412

Query: 593 QQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
            ++  +M   + C       RP+   +  VL+
Sbjct: 413 -ELYNIM---MRCWKNRPEERPTFEYIQSVLD 440

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  149 bits (379), Expect = 7e-41
 Identities = 63/293 (21%), Positives = 118/293 (40%), Gaps = 59/293 (20%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL 411
            DF + + +G GGFG V+K   R       +KRV   +++  +E    VK +++L H N+
Sbjct: 11  MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNI 66

Query: 412 VQLLG----------------WCHEKKELLLVYEFMPNGSLDSHL-------FKENSLLT 448
           V   G                   + K L +  EF   G+L+  +         +   L 
Sbjct: 67  VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126

Query: 449 WEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG 508
                   Q +  G+ Y+     + +++RD+K SNI L      KIGDFGL   +++   
Sbjct: 127 L-----FEQ-ITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 177

Query: 509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQW 568
              +   GT+ YM+PE  ++    KE D+Y+ G++  E+                + L+ 
Sbjct: 178 RTRSK--GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDT--AFETSKFFTDLR- 232

Query: 569 VWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIH 621
                 +G + +  D +  +      +++L+             RP+  +++ 
Sbjct: 233 ------DGIISDIFDKKE-KTL----LQKLL-------SKKPEDRPNTSEILR 267

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  152 bits (385), Expect = 7e-41
 Identities = 82/346 (23%), Positives = 145/346 (41%), Gaps = 70/346 (20%)

Query: 312 RKRKEGDEEDNQGFSEY---IDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGV 368
           R     D     G SEY    D ++E       FP  +L L        + LG+G FG V
Sbjct: 52  RLSSTADTPMLAGVSEYELPEDPKWE-------FPRDKLTL-------GKPLGEGCFGQV 97

Query: 369 YKG-------FFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCH 419
                        +    +AVK +    +++ + +  SE++++  + +H+N++ LLG C 
Sbjct: 98  VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157

Query: 420 EKKELLLVYEFMPNGSLDSHL---------------FKENSLLTWEFRYKIAQDLASGLL 464
           +   L ++ E+   G+L  +L                     +T++        LA G+ 
Sbjct: 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGME 217

Query: 465 YLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG----- 519
           YL     Q  +HRD+ + N+++  N   KI DFGLAR +     +       T G     
Sbjct: 218 YLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDIN----NIDYYKKTTNGRLPVK 270

Query: 520 YMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKL 578
           +MAPE       + +SDV+SFG++  EI   G  P       G + + + ++ L   G  
Sbjct: 271 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-----PG-IPVEE-LFKLLKEGHR 323

Query: 579 LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           ++   P  C +    ++  +M     C H   + RP+ +Q++  L+
Sbjct: 324 MDK--PANCTN----ELYMMM---RDCWHAVPSQRPTFKQLVEDLD 360

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  149 bits (379), Expect = 1e-40
 Identities = 63/326 (19%), Positives = 112/326 (34%), Gaps = 48/326 (14%)

Query: 336 GAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKE 395
           G     F    + +    +   QKLG+GGF  V          + A+KR+    +Q  +E
Sbjct: 13  GRENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREE 72

Query: 396 YASEVKIISRLRHRNLVQLLGWCHEKK----ELLLVYEFMPNGSLDSHL---------FK 442
              E  +     H N+++L+ +C  ++    E  L+  F   G+L + +           
Sbjct: 73  AQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLT 132

Query: 443 ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL 502
           E+ +L       +   +  GL  +     +   HRD+K +NI+L       + D G    
Sbjct: 133 EDQIL------WLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183

Query: 503 VEHAKGSQTTVLA--------GTMGYMAPE---CATTGKASKESDVYSFGIVALEIACGR 551
                      L          T+ Y APE     +     + +DV+S G V   +  G 
Sbjct: 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243

Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
            P +    +G  S+   V       +L     PR             ++  +    P + 
Sbjct: 244 GPYDMVFQKGD-SVALAV-----QNQLSIPQSPRHSSAL------WQLLNSMMTVDPHQ- 290

Query: 612 LRPSIRQVI-HVLNFEAPLPALPPKM 636
            RP I  ++  +   + P P      
Sbjct: 291 -RPHIPLLLSQLEALQPPAPGQHTTQ 315

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  154 bits (391), Expect = 1e-40
 Identities = 81/269 (30%), Positives = 127/269 (47%), Gaps = 24/269 (8%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
            KLGQG FG V+ G +  T   +A+K +  G+    + +  E +++ +LRH  LVQL   
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAV 330

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
             E+  + +V E+M  GSL   L  E    L       +A  +ASG+ Y++       VH
Sbjct: 331 VSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 386

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           RD++++NI++  N   K+ DFGLARL+E  + +        + + APE A  G+ + +SD
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446

Query: 537 VYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQI 595
           V+SFGI+  E+   GR P  P     +V  L  V      G  +    P  C +     +
Sbjct: 447 VWSFGILLTELTTKGRVP-YPGMVNREV--LDQV----ERGYRMPC--PPECPE----SL 493

Query: 596 ERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
             LM     C   +   RP+   +   L 
Sbjct: 494 HDLM---CQCWRKEPEERPTFEYLQAFLE 519

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  149 bits (378), Expect = 2e-40
 Identities = 82/335 (24%), Positives = 136/335 (40%), Gaps = 72/335 (21%)

Query: 325 FSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFR-----ETNSY 379
           F    D ++E       FP K L L        + LG+G FG V K            + 
Sbjct: 10  FKILEDPKWE-------FPRKNLVL-------GKTLGEGEFGKVVKATAFHLKGRAGYTT 55

Query: 380 IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           +AVK + +  S   +++  SE  ++ ++ H ++++L G C +   LLL+ E+   GSL  
Sbjct: 56  VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115

Query: 439 HL-----------------------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
            L                         +   LT       A  ++ G+ YL    E  +V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLV 172

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECATTGK 530
           HRD+ + NI++      KI DFGL+R V      + + +  + G     +MA E      
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVY----EEDSYVKRSQGRIPVKWMAIESLFDHI 228

Query: 531 ASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD 589
            + +SDV+SFG++  EI   G  P       G +   + +++L   G  +E   P  C +
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPY-----PG-IPPER-LFNLLKTGHRMER--PDNCSE 279

Query: 590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
               ++ RLM   L C   + + RP    +   L 
Sbjct: 280 ----EMYRLM---LQCWKQEPDKRPVFADISKDLE 307

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  149 bits (379), Expect = 2e-40
 Identities = 76/323 (23%), Positives = 127/323 (39%), Gaps = 62/323 (19%)

Query: 328 YIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAV 382
             ++++E       FP   L          + LG G FG V +         +    +AV
Sbjct: 36  PYNEKWE-------FPRNNLQF-------GKTLGAGAFGKVVEATAFGLGKEDAVLKVAV 81

Query: 383 KRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           K +         +   SE+KI+S L +H N+V LLG C     +L++ E+   G L + L
Sbjct: 82  KMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141

Query: 441 -------------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD 487
                           NS  +       +  +A G+ +L     +  +HRD+ + N++L 
Sbjct: 142 RRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLT 198

Query: 488 SNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECATTGKASKESDVYSFGI 542
           +   AKIGDFGLAR +     + +  +          +MAPE       + +SDV+S+GI
Sbjct: 199 NGHVAKIGDFGLARDIM----NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254

Query: 543 VALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIV 601
           +  EI   G  P       G +   +  + L  +G  +    P          I  +M  
Sbjct: 255 LLWEIFSLGLNPY-----PGILVNSK-FYKLVKDGYQMAQ--PAFAPK----NIYSIM-- 300

Query: 602 GLWCAHPDENLRPSIRQVIHVLN 624
              C   +   RP+ +Q+   L 
Sbjct: 301 -QACWALEPTHRPTFQQICSFLQ 322

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  147 bits (372), Expect = 1e-39
 Identities = 80/326 (24%), Positives = 129/326 (39%), Gaps = 65/326 (19%)

Query: 328 YIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAV 382
           Y   ++E       FP   L L        + LG+G FG V +          T   +AV
Sbjct: 17  YDASKWE-------FPRDRLKL-------GKPLGRGAFGQVIEADAFGIDKTATCRTVAV 62

Query: 383 KRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWC-HEKKELLLVYEFMPNGSLDSH 439
           K + +G +    +   SE+KI+  +  H N+V LLG C      L+++ EF   G+L ++
Sbjct: 63  KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122

Query: 440 L---------------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI 484
           L                     LT E     +  +A G+ +L     +  +HRD+ + NI
Sbjct: 123 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNI 179

Query: 485 MLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECATTGKASKESDVYS 539
           +L      KI DFGLAR +          +          +MAPE       + +SDV+S
Sbjct: 180 LLSEKNVVKICDFGLARDIY----KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235

Query: 540 FGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERL 598
           FG++  EI   G  P       G V + +        G  + A  P         ++ + 
Sbjct: 236 FGVLLWEIFSLGASPY-----PG-VKIDEEFCRRLKEGTRMRA--PDYTTP----EMYQT 283

Query: 599 MIVGLWCAHPDENLRPSIRQVIHVLN 624
           M   L C H + + RP+  +++  L 
Sbjct: 284 M---LDCWHGEPSQRPTFSELVEHLG 306

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  147 bits (374), Expect = 1e-39
 Identities = 72/301 (23%), Positives = 123/301 (40%), Gaps = 58/301 (19%)

Query: 358 QKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNL 411
           + +G+G FG V++         E  + +AVK + +  S     ++  E  +++   + N+
Sbjct: 53  RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHL-----------------------FKENSLLT 448
           V+LLG C   K + L++E+M  G L+  L                             L+
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172

Query: 449 WEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG 508
              +  IA+ +A+G+ YL E   +  VHRD+ + N ++  N   KI DFGL+R +  A  
Sbjct: 173 CAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD- 228

Query: 509 SQTTVLAGTMGY-----MAPECATTGKASKESDVYSFGIVALEIA-CGRKPINPKAPQGQ 562
                 A          M PE     + + ESDV+++G+V  EI   G +P         
Sbjct: 229 ---YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY------YG 279

Query: 563 VSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHV 622
           ++  + V     +G +L    P  C      ++  LM     C       RPS   +  +
Sbjct: 280 MAHEE-VIYYVRDGNILAC--PENCPL----ELYNLM---RLCWSKLPADRPSFCSIHRI 329

Query: 623 L 623
           L
Sbjct: 330 L 330

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  147 bits (373), Expect = 1e-39
 Identities = 80/335 (23%), Positives = 143/335 (42%), Gaps = 70/335 (20%)

Query: 323 QGFSEY---IDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKG-------F 372
            G SEY    D ++E       FP  +L L        + LG+G FG V           
Sbjct: 17  AGVSEYELPEDPKWE-------FPRDKLTL-------GKPLGEGAFGQVVMAEAVGIDKD 62

Query: 373 FRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEF 430
             +    +AVK +    +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+
Sbjct: 63  KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 122

Query: 431 MPNGSLDSHL---------------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
              G+L  +L                     +T++        LA G+ YL     Q  +
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCI 179

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECATTGK 530
           HRD+ + N+++  N   KI DFGLAR +     +       T G     +MAPE      
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDIN----NIDYYKKTTNGRLPVKWMAPEALFDRV 235

Query: 531 ASKESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD 589
            + +SDV+SFG++  EI   G  P       G + + + ++ L   G  ++   P  C +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPY-----PG-IPVEE-LFKLLKEGHRMDK--PANCTN 286

Query: 590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
               ++  +M     C H   + RP+ +Q++  L+
Sbjct: 287 ----ELYMMM---RDCWHAVPSQRPTFKQLVEDLD 314

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  153 bits (388), Expect = 2e-39
 Identities = 67/317 (21%), Positives = 127/317 (40%), Gaps = 53/317 (16%)

Query: 320 EDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSY 379
           ++   ++     ++E          + + L        + +G+G FG V++G +    + 
Sbjct: 372 DEEDTYTMPSTRDYE-------IQRERIEL-------GRCIGEGQFGDVHQGIYMSPENP 417

Query: 380 ---IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS 435
              +A+K      S    +++  E   + +  H ++V+L+G    +  + ++ E    G 
Sbjct: 418 AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 476

Query: 436 LDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG 495
           L S L      L        A  L++ L YL+    +  VHRDI + N+++ SN   K+G
Sbjct: 477 LRSFLQVRKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLG 533

Query: 496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIA-CGRKPI 554
           DFGL+R +E +   + +     + +MAPE     + +  SDV+ FG+   EI   G KP 
Sbjct: 534 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP- 592

Query: 555 NPKAPQGQVSLLQWVWDLYGNGKLLEAVD-------PRLCRDFDGQQIERLMIVGLWCAH 607
                          +    N  ++  ++       P  C       +  LM     C  
Sbjct: 593 ---------------FQGVKNNDVIGRIENGERLPMPPNCPP----TLYSLM---TKCWA 630

Query: 608 PDENLRPSIRQVIHVLN 624
            D + RP   ++   L+
Sbjct: 631 YDPSRRPRFTELKAQLS 647

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  145 bits (367), Expect = 2e-39
 Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 10/205 (4%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKEY-ASEVKIISRLRH 408
            DF   + LG+G FG VY    +++   +A+K +  +Q  K G++     EV+I S LRH
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
            N+++L G+ H+   + L+ E+ P G++   L K +          I + LA+ L Y   
Sbjct: 69  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHS 127

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT 528
              + V+HRDIK  N++L S    KI DFG +    HA  S+ T L GT+ Y+ PE    
Sbjct: 128 ---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEMIEG 181

Query: 529 GKASKESDVYSFGIVALEIACGRKP 553
               ++ D++S G++  E   G+ P
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPP 206

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  146 bits (370), Expect = 2e-39
 Identities = 58/301 (19%), Positives = 125/301 (41%), Gaps = 37/301 (12%)

Query: 337 AGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS--QGSKQGIK 394
            G +   ++ +++    ++  +++G GG   V++    E     A+K V+  +   Q + 
Sbjct: 13  LGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLD 71

Query: 395 EYASEVKIISRLRHRNL--VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFR 452
            Y +E+  +++L+  +   ++L  +    + + +V E   N  L+S L K+ S+  WE +
Sbjct: 72  SYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERK 130

Query: 453 YKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV-EHAKGSQT 511
               +++   +  + +     +VH D+K +N ++      K+ DFG+A  +         
Sbjct: 131 S-YWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVK 185

Query: 512 TVLAGTMGYMAPE-----------CATTGKASKESDVYSFGIVALEIACGRKPINPKAPQ 560
               GT+ YM PE             +  K S +SDV+S G +   +  G+ P       
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QII 243

Query: 561 GQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
            Q+S L  + D     +  +  +    +D     ++  +         D   R SI +++
Sbjct: 244 NQISKLHAIIDPNHEIEFPDIPEK-DLQDV----LKCCLKR-------DPKQRISIPELL 291

Query: 621 H 621
            
Sbjct: 292 A 292

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  144 bits (366), Expect = 3e-39
 Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 22/217 (10%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHR 409
            D+     +G G +G   K   +     +  K +  G  ++   +   SEV ++  L+H 
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65

Query: 410 NLVQLLGWCHEK--KELLLVYEFMPNGSLDSHL---------FKENSLLTWEFRYKIAQD 458
           N+V+      ++    L +V E+   G L S +           E  +L       + Q 
Sbjct: 66  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV-----MTQ- 119

Query: 459 LASGLLYL--QEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG 516
           L   L     + +    V+HRD+K +N+ LD   N K+GDFGLAR++ H   S      G
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKTFVG 178

Query: 517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           T  YM+PE       +++SD++S G +  E+     P
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  145 bits (369), Expect = 4e-39
 Identities = 80/296 (27%), Positives = 129/296 (43%), Gaps = 57/296 (19%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYI--AVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLV 412
              +G+G FG V K   ++    +  A+KR+ +  SK   +++A E++++ +L  H N++
Sbjct: 30  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHL---------------FKENSLLTWEFRYKIAQ 457
            LLG C  +  L L  E+ P+G+L   L                   S L+ +     A 
Sbjct: 90  NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149

Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT 517
           D+A G+ YL    ++  +HRD+ + NI++  N+ AKI DFGL+R  E            T
Sbjct: 150 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV-------KKT 199

Query: 518 MG-----YMAPECATTGKASKESDVYSFGIVALEIA-CGRKP---INPKAPQGQVSLLQW 568
           MG     +MA E       +  SDV+S+G++  EI   G  P   +              
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC----------AE 249

Query: 569 VWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           +++    G  LE   P  C D    ++  LM     C       RPS  Q++  LN
Sbjct: 250 LYEKLPQGYRLEK--PLNCDD----EVYDLM---RQCWREKPYERPSFAQILVSLN 296

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  145 bits (367), Expect = 6e-39
 Identities = 73/326 (22%), Positives = 125/326 (38%), Gaps = 66/326 (20%)

Query: 328 YIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKG-----FFRETNSYIAV 382
             D ++E       FP   L+         + LG G FG V +         +    +AV
Sbjct: 13  PYDHKWE-------FPRNRLSF-------GKTLGAGAFGKVVEATAYGLIKSDAAMTVAV 58

Query: 383 KRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           K +         +   SE+K++S L  H N+V LLG C      L++ E+   G L + L
Sbjct: 59  KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118

Query: 441 -----------------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSN 483
                              +   L  E     +  +A G+ +L     +  +HRD+ + N
Sbjct: 119 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARN 175

Query: 484 IMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECATTGKASKESDVY 538
           I+L      KI DFGLAR ++    + +  +          +MAPE       + ESDV+
Sbjct: 176 ILLTHGRITKICDFGLARDIK----NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 231

Query: 539 SFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIER 597
           S+GI   E+   G  P       G + +    + +   G  + +  P         ++  
Sbjct: 232 SYGIFLWELFSLGSSPY-----PG-MPVDSKFYKMIKEGFRMLS--PEHAPA----EMYD 279

Query: 598 LMIVGLWCAHPDENLRPSIRQVIHVL 623
           +M     C   D   RP+ +Q++ ++
Sbjct: 280 IM---KTCWDADPLKRPTFKQIVQLI 302

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  145 bits (368), Expect = 6e-39
 Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 16/253 (6%)

Query: 307 LAGIGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFG 366
           LA + +    G  +  +   E  D+E        +    E     +      ++G+G FG
Sbjct: 13  LASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFG 72

Query: 367 GVYKGFFRETNSYIAVKRVS-QGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL 425
            V++   ++T    AVK+V  +  +        E+   + L    +V L G   E   + 
Sbjct: 73  EVHRMKDKQTGFQCAVKKVRLEVFRV------EELVACAGLSSPRIVPLYGAVREGPWVN 126

Query: 426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM 485
           +  E +  GSL   + +   L      Y + Q L  GL YL     + ++H D+K+ N++
Sbjct: 127 IFMELLEGGSLGQLIKQMGCLPEDRALYYLGQAL-EGLEYLH---TRRILHGDVKADNVL 182

Query: 486 LDSN-FNAKIGDFGLARLVEHAKGSQTTV----LAGTMGYMAPECATTGKASKESDVYSF 540
           L S+   A + DFG A  ++     ++ +    + GT  +MAPE         + D++S 
Sbjct: 183 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 242

Query: 541 GIVALEIACGRKP 553
             + L +  G  P
Sbjct: 243 CCMMLHMLNGCHP 255

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  146 bits (370), Expect = 1e-38
 Identities = 74/327 (22%), Positives = 135/327 (41%), Gaps = 67/327 (20%)

Query: 328 YIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKG-------FFRETNSYI 380
             D  +E        P   L L        + LG+G FG V                + +
Sbjct: 59  PEDPRWE-------LPRDRLVL-------GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKV 104

Query: 381 AVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS 438
           AVK +    +++ + +  SE++++  + +H+N++ LLG C +   L ++ E+   G+L  
Sbjct: 105 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 164

Query: 439 HL---------------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSN 483
           +L                     L+ +     A  +A G+ YL     +  +HRD+ + N
Sbjct: 165 YLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARN 221

Query: 484 IMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECATTGKASKESDVY 538
           +++  +   KI DFGLAR +             T G     +MAPE       + +SDV+
Sbjct: 222 VLVTEDNVMKIADFGLARDIH----HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 277

Query: 539 SFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIER 597
           SFG++  EI   G  P       G V + + ++ L   G  ++   P  C +    ++  
Sbjct: 278 SFGVLLWEIFTLGGSPY-----PG-VPVEE-LFKLLKEGHRMDK--PSNCTN----ELYM 324

Query: 598 LMIVGLWCAHPDENLRPSIRQVIHVLN 624
           +M     C H   + RP+ +Q++  L+
Sbjct: 325 MM---RDCWHAVPSQRPTFKQLVEDLD 348

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  144 bits (366), Expect = 1e-38
 Identities = 57/284 (20%), Positives = 117/284 (41%), Gaps = 37/284 (13%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS--QGSKQGIKEYASEVKIISRLRHR 409
             ++  +++G GG   V++    E     A+K V+  +   Q +  Y +E+  +++L+  
Sbjct: 9   RIYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 67

Query: 410 NL--VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
           +   ++L  +    + + +V E   N  L+S L K+ S+  WE +    +++   +  + 
Sbjct: 68  SDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKS-YWKNMLEAVHTIH 125

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV-EHAKGSQTTVLAGTMGYMAPE-- 524
           +     +VH D+K +N ++      K+ DFG+A  +             GT+ YM PE  
Sbjct: 126 Q---HGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181

Query: 525 ---------CATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN 575
                      +  K S +SDV+S G +   +  G+ P        Q+S L  + D    
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHE 239

Query: 576 GKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQV 619
            +  +  +    +D     ++  +         D   R SI ++
Sbjct: 240 IEFPDIPEK-DLQDV----LKCCLKR-------DPKQRISIPEL 271

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  144 bits (365), Expect = 1e-38
 Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 8/197 (4%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKE-YASEVKIISRLRHRNLVQLLG 416
           LG+GGF   ++    +T    A K V  S   K   +E  + E+ I   L H+++V   G
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
           +  +   + +V E     SL     +  +L   E RY + Q +  G  YL       V+H
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-IVLGCQYLHR---NRVIH 164

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           RD+K  N+ L+ +   KIGDFGLA  VE+    +   L GT  Y+APE  +    S E D
Sbjct: 165 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVD 223

Query: 537 VYSFGIVALEIACGRKP 553
           V+S G +   +  G+ P
Sbjct: 224 VWSIGCIMYTLLVGKPP 240

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  142 bits (361), Expect = 2e-38
 Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 9/198 (4%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKE-YASEVKIISRLRHRNLVQLLG 416
           LG+G F GVY+     T   +A+K +      K G+ +   +EVKI  +L+H ++++L  
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLT-WEFRYKIAQDLASGLLYLQEEWEQCVV 475
           +  +   + LV E   NG ++ +L       +  E R+ + Q + +G+LYL       ++
Sbjct: 79  YFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ-IITGMLYLHS---HGIL 134

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES 535
           HRD+  SN++L  N N KI DFGLA  ++       T L GT  Y++PE AT      ES
Sbjct: 135 HRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRSAHGLES 193

Query: 536 DVYSFGIVALEIACGRKP 553
           DV+S G +   +  GR P
Sbjct: 194 DVWSLGCMFYTLLIGRPP 211

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  143 bits (362), Expect = 2e-38
 Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 8/197 (4%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKE-YASEVKIISRLRHRNLVQLLG 416
           LG+GGF   ++    +T    A K V  S   K   +E  + E+ I   L H+++V   G
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82

Query: 417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVH 476
           +  +   + +V E     SL     +  +L   E RY + Q +  G  YL       V+H
Sbjct: 83  FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-IVLGCQYLHR---NRVIH 138

Query: 477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESD 536
           RD+K  N+ L+ +   KIGDFGLA  VE+    +   L GT  Y+APE  +    S E D
Sbjct: 139 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVD 197

Query: 537 VYSFGIVALEIACGRKP 553
           V+S G +   +  G+ P
Sbjct: 198 VWSIGCIMYTLLVGKPP 214

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  145 bits (368), Expect = 2e-38
 Identities = 56/280 (20%), Positives = 113/280 (40%), Gaps = 37/280 (13%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVS--QGSKQGIKEYASEVKIISRLRHRNL--VQ 413
           +++G GG   V++    E     A+K V+  +   Q +  Y +E+  +++L+  +   ++
Sbjct: 62  KQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 120

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC 473
           L  +    + + +V E   N  L+S L K+ S+  WE +      +   +  + +     
Sbjct: 121 LYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKN-MLEAVHTIHQ---HG 175

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLV-EHAKGSQTTVLAGTMGYMAPE-------- 524
           +VH D+K +N ++      K+ DFG+A  +             G + YM PE        
Sbjct: 176 IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSS 234

Query: 525 ---CATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA 581
                +  K S +SDV+S G +   +  G+ P        Q+S L  + D     +  + 
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDI 292

Query: 582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIH 621
            +    +D     ++  +         D   R SI +++ 
Sbjct: 293 PEK-DLQDV----LKCCLKR-------DPKQRISIPELLA 320

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  143 bits (362), Expect = 2e-38
 Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 29/224 (12%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRN 410
            DF   Q LG+GGFG V++   +  +   A+KR+   +++  +E    EVK +++L H  
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64

Query: 411 LVQLLGWCHEKKE------------LLLVYEFMPNGSLDSHLFKENSLLTWEFRY--KIA 456
           +V+      EK              L +  +     +L   +    ++   E      I 
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124

Query: 457 QDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA- 515
             +A  + +L     + ++HRD+K SNI    +   K+GDFGL   ++  +  QT +   
Sbjct: 125 LQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181

Query: 516 ----------GTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
                     GT  YM+PE       S + D++S G++  E+  
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY 225

>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* Length = 181

 Score =  139 bits (351), Expect = 2e-38
 Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 10/181 (5%)

Query: 35  LTFNYTSFSPQYDDNITYERAYPDSNRVIQL-PANRETAGRATYNQSMRLWDKATGNLTD 93
            +F  T FSP    N+ ++     +   + L  A + T GRA Y+  + +WD+ TGN+ +
Sbjct: 4   TSFLITKFSPD-QQNLIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVAN 62

Query: 94  FTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVE 153
           F T F+FVI++ NS   ADG  FF+AP         GGG  G+    E  + +   VAVE
Sbjct: 63  FVTSFTFVINAPNSYNVADGFTFFIAP--VDTKPQTGGGYLGVFNSAEY-DKTTQTVAVE 119

Query: 154 FDVYVNSW---DPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVAF 210
           FD + N+         H+GID+NS+KS    SW   +++G      I++N++T+ L+V+ 
Sbjct: 120 FDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKSW--KLQNGEEANVVIAFNAATNVLTVSL 177

Query: 211 T 211
           T
Sbjct: 178 T 178

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  143 bits (364), Expect = 3e-38
 Identities = 79/332 (23%), Positives = 133/332 (40%), Gaps = 71/332 (21%)

Query: 328 YIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAV 382
             D ++E       FP + L          + LG G FG V             +  +AV
Sbjct: 35  EYDLKWE-------FPRENLEF-------GKVLGSGAFGKVMNATAYGISKTGVSIQVAV 80

Query: 383 KRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL 440
           K + +       +   SE+K++++L  H N+V LLG C     + L++E+   G L ++L
Sbjct: 81  KMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 140

Query: 441 ----------------------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
                                  ++ ++LT+E     A  +A G+ +L+    +  VHRD
Sbjct: 141 RSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRD 197

Query: 479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECATTGKASK 533
           + + N+++      KI DFGLAR +     S +  +          +MAPE    G  + 
Sbjct: 198 LAARNVLVTHGKVVKICDFGLARDIM----SDSNYVVRGNARLPVKWMAPESLFEGIYTI 253

Query: 534 ESDVYSFGIVALEIA-CGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDG 592
           +SDV+S+GI+  EI   G  P       G + +    + L  NG  ++   P    +   
Sbjct: 254 KSDVWSYGILLWEIFSLGVNPY-----PG-IPVDANFYKLIQNGFKMDQ--PFYATE--- 302

Query: 593 QQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
            +I  +M     C   D   RPS   +   L 
Sbjct: 303 -EIYIIM---QSCWAFDSRKRPSFPNLTSFLG 330

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  141 bits (357), Expect = 7e-38
 Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 10/205 (4%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKEY-ASEVKIISRLRH 408
           +DF+  + LG+G FG VY    ++    +A+K +  SQ  K+G++     E++I S LRH
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
            N++++  + H++K + L+ EF P G L   L K            + + LA  L Y  E
Sbjct: 74  PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE-LADALHYCHE 132

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT 528
              + V+HRDIK  N+++      KI DFG +    HA   +   + GT+ Y+ PE    
Sbjct: 133 ---RKVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRTMCGTLDYLPPEMIEG 186

Query: 529 GKASKESDVYSFGIVALEIACGRKP 553
               ++ D++  G++  E   G  P
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVGMPP 211

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  145 bits (366), Expect = 1e-36
 Identities = 77/303 (25%), Positives = 121/303 (39%), Gaps = 32/303 (10%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEY-ASEVKIISRLRHRNLVQLL 415
            ++LG GGFG V +   ++T   +A+K+  Q      +E    E++I+ +L H N+V   
Sbjct: 19  KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 78

Query: 416 ------GWCHEKKELLLVYEFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYL 466
                          LL  E+   G L  +L +      L     R  +  D++S L YL
Sbjct: 79  EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-TLLSDISSALRYL 137

Query: 467 QEEWEQCVVHRDIKSSNIMLDSNFNA---KIGDFGLARLVEHAKGSQTTVLAGTMGYMAP 523
               E  ++HRD+K  NI+L         KI D G A+ ++  +G   T   GT+ Y+AP
Sbjct: 138 ---HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD--QGELCTEFVGTLQYLAP 192

Query: 524 ECATTGKASKESDVYSFGIVALEIACGRKPINPKAP---------QGQVSLLQWVWDLYG 574
           E     K +   D +SFG +A E   G +P  P            +     +    DL G
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTG 252

Query: 575 NGKL-LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPALP 633
             K       P         ++ER +   L      +  R +  Q  +V  F+A    L 
Sbjct: 253 AVKFSSVLPTPNHLSGILAGKLERWLQCML---MWHQRQRGTDPQNPNVGCFQALDSILS 309

Query: 634 PKM 636
            K+
Sbjct: 310 LKL 312

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  139 bits (353), Expect = 1e-36
 Identities = 64/259 (24%), Positives = 115/259 (44%), Gaps = 9/259 (3%)

Query: 345 KELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYASEVKII 403
           K   L  +DF    +LG G  G V+K   + +   +A K +  +       +   E++++
Sbjct: 26  KVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 85

Query: 404 SRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGL 463
                  +V   G  +   E+ +  E M  GSLD  + K+   +  +   K++  +  GL
Sbjct: 86  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ-VLKKAGRIPEQILGKVSIAVIKGL 144

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA-RLVEHAKGSQTTVLAGTMGYMA 522
            YL+E+ +  ++HRD+K SNI+++S    K+ DFG++ +L++    S      GT  YM+
Sbjct: 145 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMS 198

Query: 523 PECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV 582
           PE       S +SD++S G+  +E+A GR PI P   +    +     +           
Sbjct: 199 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPR 258

Query: 583 DPRLCRDFDGQQIERLMIV 601
            P    +  G      M +
Sbjct: 259 TPGRPLNKFGMDSRPPMAI 277

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  139 bits (350), Expect = 3e-36
 Identities = 44/351 (12%), Positives = 84/351 (23%), Gaps = 59/351 (16%)

Query: 308 AGIGRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGG 367
             IG  R+E  +E      E +                 L+         + L  G    
Sbjct: 20  ELIGYCREEALKEPAA-MVEAVTATVWPQNAETTVD-SLLSQGERKLKLVEPLRVGDRSV 77

Query: 368 VYKGFFRETNSYIAVKRVSQGSKQGIKEYAS---EVKIISRLRHRNLVQLLGWCH----- 419
           V+     E     A+K  + G++    E           +RL   +  +           
Sbjct: 78  VFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPS 137

Query: 420 ---------------------EKKELLLVYEFM-----PNGSLDSHLFKENSLLTWEFRY 453
                                     LL+            S    ++           +
Sbjct: 138 DAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALH 197

Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
            +   L      LQ    + +VH      N+ +  +    +GD           G++   
Sbjct: 198 ILTAQLIRLAANLQS---KGLVHGHFTPDNLFIMPDGRLMLGDVSALW----KVGTRGPA 250

Query: 514 LAGTMGYMAPECATTGKA--SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWD 571
            +  + Y   E      A  +   + +  G+    + C   P     P  + S  +    
Sbjct: 251 SSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLR 310

Query: 572 LYGNGKLLEAVDPRL---CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQV 619
           + G   L       L    +      I R +       + D   R    + 
Sbjct: 311 VPGTDSLAFGSCTPLPDFVKTL----IGRFL-------NFDRRRRLLPLEA 350

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  136 bits (343), Expect = 1e-35
 Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 24/215 (11%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLL 415
              LGQG    V++G  ++T    A+K  +  S  + +     E +++ +L H+N+V+L 
Sbjct: 14  SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73

Query: 416 G--WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTW---EFRYKIAQDLASGLLYLQEEW 470
                   +  +L+ EF P GSL + L + ++       EF   + +D+  G+ +L    
Sbjct: 74  AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL-IVLRDVVGGMNHL---R 129

Query: 471 EQCVVHRDIKSSNIML----DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE-- 524
           E  +VHR+IK  NIM     D     K+ DFG AR +E     Q   L GT  Y+ P+  
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE--DDEQFVSLYGTEEYLHPDMY 187

Query: 525 -----CATTGKA-SKESDVYSFGIVALEIACGRKP 553
                     K      D++S G+     A G  P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  134 bits (340), Expect = 1e-35
 Identities = 65/303 (21%), Positives = 107/303 (35%), Gaps = 69/303 (22%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRL-R 407
           T +F++ +K+G G FG V+K   R      A+KR  +        +    EV   + L +
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL---------FKENSLLTWEFRYKIAQD 458
           H ++V+      E   +L+  E+   GSL   +         FKE  L            
Sbjct: 70  HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDL------LLQ 123

Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSN-------------------FNAKIGDFGL 499
           +  GL Y+       +VH DIK SNI +                         KIGD G 
Sbjct: 124 VGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGH 180

Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPE-CATTGKASKESDVYSFGIVALEIACGRKPINPKA 558
                  + S   V  G   ++A E          ++D+++  +  +  A       P+ 
Sbjct: 181 V-----TRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPL--PRN 233

Query: 559 PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF--DGQQIERLMIVGLWCAHPDENLRPSI 616
                      W     G+L     PR+ +    +  ++ ++MI      HPD   RPS 
Sbjct: 234 GDQ--------WHEIRQGRL-----PRIPQVLSQEFTELLKVMI------HPDPERRPSA 274

Query: 617 RQV 619
             +
Sbjct: 275 MAL 277

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  136 bits (343), Expect = 2e-35
 Identities = 49/228 (21%), Positives = 91/228 (39%), Gaps = 33/228 (14%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKEYAS----------- 398
           ND+   + L QG F  +      + N + A+K+   S   K+     ++           
Sbjct: 31  NDYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYD 88

Query: 399 ----EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY- 453
               E++II+ +++   +   G      E+ ++YE+M N S+         L      + 
Sbjct: 89  DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148

Query: 454 ------KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK 507
                  I + + +   Y+  E  + + HRD+K SNI++D N   K+ DFG +   E+  
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGES---EYMV 203

Query: 508 GSQTTVLAGTMGYMAPE-CATTGK-ASKESDVYSFGIVALEIACGRKP 553
             +     GT  +M PE  +        + D++S GI    +     P
Sbjct: 204 DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  133 bits (336), Expect = 1e-34
 Identities = 62/340 (18%), Positives = 116/340 (34%), Gaps = 56/340 (16%)

Query: 336 GAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKE 395
           G     F  + + L        + L +GGF  VY+     +    A+KR+    ++  + 
Sbjct: 12  GRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRA 71

Query: 396 YASEVKIISRLR-HRNLVQLLGWC--------HEKKELLLVYEFMPNGSLD-------SH 439
              EV  + +L  H N+VQ               + E LL+ E      ++         
Sbjct: 72  IIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG 131

Query: 440 LFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
               +++L      KI       + ++  + +  ++HRD+K  N++L +    K+ DFG 
Sbjct: 132 PLSCDTVL------KIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGS 184

Query: 500 ARLVEHAKGSQTTVLA-----------GTMGYMAPE-CATTGKA--SKESDVYSFGIVAL 545
           A  + H      +               T  Y  PE           ++ D+++ G +  
Sbjct: 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY 244

Query: 546 EIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWC 605
            +   + P        ++ ++        NGK            F    + R M+     
Sbjct: 245 LLCFRQHPFE---DGAKLRIV--------NGKYSIPPHDTQYTVF--HSLIRAMLQ---- 287

Query: 606 AHPDENLRPSIRQVIHVLNFEAPLPALPPKMPVPTYLSPP 645
              +   R SI +V+H L   A    + PK P+   L   
Sbjct: 288 --VNPEERLSIAEVVHQLQEIAAARNVNPKSPITELLEQN 325

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  132 bits (333), Expect = 2e-34
 Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 6/203 (2%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN 410
              +   +K+GQG  G VY      T   +A+++++   +   +   +E+ ++   ++ N
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           +V  L       EL +V E++  GSL + +  E  +   +    + ++    L +L    
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAA-VCRECLQALEFLH--- 133

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK 530
              V+HRDIKS NI+L  + + K+ DFG    +   +  ++T+  GT  +MAPE  T   
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVTRKA 192

Query: 531 ASKESDVYSFGIVALEIACGRKP 553
              + D++S GI+A+E+  G  P
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPP 215

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  134 bits (338), Expect = 2e-34
 Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 24/215 (11%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEY-ASEVKIISRLRHRNLVQLL 415
              LGQG    V++G  ++T    A+K  +  S     +    E +++ +L H+N+V+L 
Sbjct: 14  SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73

Query: 416 GW--CHEKKELLLVYEFMPNGSLDSHLFKENSLLTW---EFRYKIAQDLASGLLYLQEEW 470
                   +  +L+ EF P GSL + L + ++       EF   + +D+  G+ +L    
Sbjct: 74  AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL-IVLRDVVGGMNHL---R 129

Query: 471 EQCVVHRDIKSSNIML----DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE-- 524
           E  +VHR+IK  NIM     D     K+ DFG AR +E     Q   L GT  Y+ P+  
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE--DDEQFVSLYGTEEYLHPDMY 187

Query: 525 -----CATTGKA-SKESDVYSFGIVALEIACGRKP 553
                     K      D++S G+     A G  P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  131 bits (331), Expect = 4e-34
 Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 6/200 (3%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQ 413
            +   K+G+G  G V     + +   +AVK +    +Q  +   +EV I+   +H N+V+
Sbjct: 47  LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC 473
           +       +EL ++ EF+  G+L + +  +  L   +    + + +   L YL     Q 
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGAL-TDIVSQVRLNEEQIAT-VCEAVLQALAYLH---AQG 161

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASK 533
           V+HRDIKS +I+L  +   K+ DFG    +      + ++  GT  +MAPE  +    + 
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL-VGTPYWMAPEVISRSLYAT 220

Query: 534 ESDVYSFGIVALEIACGRKP 553
           E D++S GI+ +E+  G  P
Sbjct: 221 EVDIWSLGIMVIEMVDGEPP 240

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  130 bits (330), Expect = 5e-34
 Identities = 54/211 (25%), Positives = 106/211 (50%), Gaps = 12/211 (5%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQ 413
           +    +LG G FG VYK   +ET +  A K +   S++ +++Y  E++I++   H  +V+
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC 473
           LLG  +   +L ++ EF P G++D+ + + +  LT      + + +   L +L     + 
Sbjct: 81  LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKR 137

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASK 533
           ++HRD+K+ N+++    + ++ DFG++         + + + GT  +MAPE         
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMKD 196

Query: 534 ES-----DVYSFGIVALEIACGRKP---INP 556
                  D++S GI  +E+A    P   +NP
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHHELNP 227

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  130 bits (329), Expect = 6e-34
 Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 7/202 (3%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYASEVKIISRLRHRNL 411
            F   +K+G+G FG V+KG    T   +A+K +  + ++  I++   E+ ++S+     +
Sbjct: 23  LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
            +  G   +  +L ++ E++  GS    L +   L   +    I +++  GL YL     
Sbjct: 83  TKYYGSYLKDTKLWIIMEYLGGGSA-LDLLEPGPLDETQIAT-ILREILKGLDYLHS--- 137

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA 531
           +  +HRDIK++N++L  +   K+ DFG+A  +   +  + T   GT  +MAPE       
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF-VGTPFWMAPEVIKQSAY 196

Query: 532 SKESDVYSFGIVALEIACGRKP 553
             ++D++S GI A+E+A G  P
Sbjct: 197 DSKADIWSLGITAIELARGEPP 218

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  129 bits (327), Expect = 2e-33
 Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 15/221 (6%)

Query: 343 PYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRV-SQGSKQGIKEYASEVK 401
           P +       D  D  ++G+G +G V K   + +   +AVKR+ S   ++  K+   ++ 
Sbjct: 13  PEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLD 72

Query: 402 IISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFR----YKIA 456
           ++ R      +VQ  G    + +  +  E M + S D       S+L          KI 
Sbjct: 73  VVMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKIT 131

Query: 457 QDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG 516
                 L +L+E  +  ++HRDIK SNI+LD + N K+ DFG++  +  +         G
Sbjct: 132 LATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA--G 187

Query: 517 TMGYMAPE---CATTGKA-SKESDVYSFGIVALEIACGRKP 553
              YMAPE    + + +     SDV+S GI   E+A GR P
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  129 bits (327), Expect = 3e-33
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 18/212 (8%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS---QGSKQGIKEYASEVKIISRLRHRN 410
           F+D +++G G FG VY       +  +A+K++S   + S +  ++   EV+ + +LRH N
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
            +Q  G    +    LV E+    + D     +  L   E    +      GL YL    
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA-VTHGALQGLAYLHS-- 172

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK 530
              ++HRD+K+ NI+L      K+GDFG A     +  +      GT  +MAPE      
Sbjct: 173 -HNMIHRDVKAGNILLSEPGLVKLGDFGSA-----SIMAPANSFVGTPYWMAPEVILAMD 226

Query: 531 AS---KESDVYSFGIVALEIACGRKP---INP 556
                 + DV+S GI  +E+A  + P   +N 
Sbjct: 227 EGQYDGKVDVWSLGITCIELAERKPPLFNMNA 258

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  127 bits (322), Expect = 5e-33
 Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 16/220 (7%)

Query: 347 LALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRV-SQGSKQGIKEYASEVKIISR 405
           + +  +D     +LG+G +G V K     +   +AVKR+ +  + Q  K    ++ I  R
Sbjct: 2   MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61

Query: 406 L-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDS---HLFKENSLLTWEFRYKIAQDLAS 461
                  V   G    + ++ +  E M + SLD     +  +   +  +   KIA  +  
Sbjct: 62  TVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK 120

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL-ARLVEHAKGSQTTVLAGTMGY 520
            L +L  +    V+HRD+K SN+++++    K+ DFG+   LV     ++    AG   Y
Sbjct: 121 ALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV--DDVAKDID-AGCKPY 175

Query: 521 MAPE---CATTGKA-SKESDVYSFGIVALEIACGRKPINP 556
           MAPE        K  S +SD++S GI  +E+A  R P + 
Sbjct: 176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  128 bits (323), Expect = 5e-33
 Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 9/206 (4%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQ 413
           F+  +KLG+G +G VYK   +ET   +A+K+V    +  ++E   E+ I+ +    ++V+
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQEIIKEISIMQQCDSPHVVK 88

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC 473
             G   +  +L +V E+   GS+   +   N  LT +    I Q    GL YL       
Sbjct: 89  YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MR 145

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASK 533
            +HRDIK+ NI+L++  +AK+ DFG+A  +      + TV+ GT  +MAPE       + 
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVI-GTPFWMAPEVIQEIGYNC 204

Query: 534 ESDVYSFGIVALEIACGRKP---INP 556
            +D++S GI A+E+A G+ P   I+P
Sbjct: 205 VADIWSLGITAIEMAEGKPPYADIHP 230

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  127 bits (322), Expect = 7e-33
 Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 12/222 (5%)

Query: 345 KELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRV-SQGSKQGIKEYASEVKII 403
           +      ND  +  ++G G  G V+K  FR+T   IAVK++   G+K+  K    ++ ++
Sbjct: 18  QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV 77

Query: 404 SRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASG 462
            +      +VQ  G      ++ +  E M     +    +    +      K+   +   
Sbjct: 78  LKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKA 136

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
           L YL+E+    V+HRD+K SNI+LD     K+ DFG++  +   K    +   G   YMA
Sbjct: 137 LYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--GCAAYMA 192

Query: 523 PECATTGKASKE-----SDVYSFGIVALEIACGRKPINPKAP 559
           PE       +K      +DV+S GI  +E+A G+ P      
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT 234

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  127 bits (321), Expect = 3e-32
 Identities = 48/219 (21%), Positives = 82/219 (37%), Gaps = 22/219 (10%)

Query: 351 TNDFNDDQKLGQG--GFGGVYKGFFRETNSYIAVKRVS--QGSKQGIKEYASEVKIISRL 406
              +     +G+G      V    ++ T  Y+ V+R++    S + +     E+ +    
Sbjct: 24  GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF 83

Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIA---QDLASGL 463
            H N+V          EL +V  FM  GS    L   + +        IA   Q +   L
Sbjct: 84  NHPNIVPYRATFIADNELWVVTSFMAYGSA-KDLICTHFMDGMNELA-IAYILQGVLKAL 141

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL------AGT 517
            Y+        VHR +K+S+I++  +    +        +      Q  V          
Sbjct: 142 DYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKV 198

Query: 518 MGYMAPE---CATTGKASKESDVYSFGIVALEIACGRKP 553
           + +++PE       G  +K SD+YS GI A E+A G  P
Sbjct: 199 LPWLSPEVLQQNLQGYDAK-SDIYSVGITACELANGHVP 236

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  125 bits (316), Expect = 6e-32
 Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 20/217 (9%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHR 409
              F   + +G G +G VYKG   +T    A+K +   +    +E   E+ ++ +   HR
Sbjct: 23  AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-TGDEEEEIKQEINMLKKYSHHR 81

Query: 410 NLVQLLG------WCHEKKELLLVYEFMPNGSLDS--HLFKENSLLTWEFRYKIAQDLAS 461
           N+    G            +L LV EF   GS+       K N+L      Y I +++  
Sbjct: 82  NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY-ICREILR 140

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
           GL +L +     V+HRDIK  N++L  N   K+ DFG++  ++   G + T   GT  +M
Sbjct: 141 GLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF-IGTPYWM 196

Query: 522 APECATTGKASKES-----DVYSFGIVALEIACGRKP 553
           APE     +    +     D++S GI A+E+A G  P
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  123 bits (312), Expect = 1e-31
 Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 7/200 (3%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVK--RVSQGSKQG-IKEYASEVKIISRLRHRNLVQ 413
             KLG GG   VY       N  +A+K   +    K+  +K +  EV   S+L H+N+V 
Sbjct: 16  VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC 473
           ++    E     LV E++   +L  ++ + +  L+ +        +  G+ +  +     
Sbjct: 76  MIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAHD---MR 131

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASK 533
           +VHRDIK  NI++DSN   KI DFG+A+ +     +QT  + GT+ Y +PE A      +
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191

Query: 534 ESDVYSFGIVALEIACGRKP 553
            +D+YS GIV  E+  G  P
Sbjct: 192 CTDIYSIGIVLYEMLVGEPP 211

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  126 bits (317), Expect = 2e-31
 Identities = 47/378 (12%), Positives = 93/378 (24%), Gaps = 67/378 (17%)

Query: 311 GRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATN---DFNDDQKLGQGGFGG 367
            R  +      ++      D            P++  +              LGQ     
Sbjct: 34  NRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYA 93

Query: 368 VYKGFFRETNSYIAVK---RVSQGSKQGIKEYASEVKIISRLR----------------- 407
             +   +ET     V       +     IK+   EV  +  LR                 
Sbjct: 94  YLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFP 153

Query: 408 --------HRNLVQLLGW--CHEKKELLLVYEFMPN-----GSLDSHLFKENSLLTWEFR 452
                    + ++++              +Y  M +     G +       +  L    R
Sbjct: 154 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHAR 213

Query: 453 YKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT 512
            ++   +   L  L       +VH  ++  +I+LD      +  F        +  S   
Sbjct: 214 LQLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG 270

Query: 513 VLAGTMGYMAPECAT-----TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQ 567
                    A              +   D ++ G+    I C   P    A  G     +
Sbjct: 271 RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALG---GSE 327

Query: 568 WVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA 627
           W++             P+  R      +E  +         ++  R    Q +    +E 
Sbjct: 328 WIFR-------SCKNIPQPVRAL----LEGFLRY-----PKED--RLLPLQAMETPEYEQ 369

Query: 628 PLPALPPKMPVPTYLSPP 645
               L   +P+      P
Sbjct: 370 LRTELSAALPLYQTDGEP 387

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  125 bits (314), Expect = 2e-31
 Identities = 37/236 (15%), Positives = 75/236 (31%), Gaps = 24/236 (10%)

Query: 339 PKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS--QGSKQGIKEY 396
           P   P  E  L +        LG+G F  VY+    + N     ++            E+
Sbjct: 52  PAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEF 111

Query: 397 ASEVKIISRLR---HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL----FKENSLLTW 449
               +++ RL+       ++       +   +LV E    G+L + +         ++  
Sbjct: 112 YIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQ 171

Query: 450 EFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-----------DSNFNAKIGDFG 498
                 A  +   +  +    +  ++H DIK  N +L           D +    + D G
Sbjct: 172 GLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLG 228

Query: 499 LAR-LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
            +  +    KG+  T    T G+   E  +    + + D +        +  G   
Sbjct: 229 QSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYM 284

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  126 bits (318), Expect = 2e-31
 Identities = 55/287 (19%), Positives = 100/287 (34%), Gaps = 50/287 (17%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNL 411
            F     LG G  G +        N  +AVKR+     +       EV+++     H N+
Sbjct: 25  SFCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRIL---PECFSFADREVQLLRESDEHPNV 80

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           ++      +++   +  E     +L  ++ +++          + Q   SGL +L     
Sbjct: 81  IRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS--- 136

Query: 472 QCVVHRDIKSSNIML-----DSNFNAKIGDFGLARLVEHAKGSQTTV--LAGTMGYMAPE 524
             +VHRD+K  NI++          A I DFGL + +   + S +    + GT G++APE
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196

Query: 525 ---CATTGKASKESDVYSFGIVALEIACGRKP---------INPKAPQGQVSLLQWVWDL 572
                     +   D++S G V   +                N       +  L      
Sbjct: 197 MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKH- 255

Query: 573 YGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQV 619
                     +  + R+     IE+++         D   RPS + V
Sbjct: 256 ----------EDVIAREL----IEKMI-------AMDPQKRPSAKHV 281

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  123 bits (310), Expect = 2e-31
 Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 18/216 (8%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYASEVKIISRLRHRN 410
           +D+   + +G G    V   +       +A+KR++ +  +  + E   E++ +S+  H N
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK--------IAQDLASG 462
           +V        K EL LV + +  GS+   + K                    I +++  G
Sbjct: 75  IVSYYTSFVVKDELWLVMKLLSGGSV-LDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG----LARLVEHAKGSQTTVLAGTM 518
           L YL +      +HRD+K+ NI+L  + + +I DFG    LA   +  +        GT 
Sbjct: 134 LEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190

Query: 519 GYMAPECATTGKA-SKESDVYSFGIVALEIACGRKP 553
            +MAPE     +    ++D++SFGI A+E+A G  P
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  120 bits (302), Expect = 4e-30
 Identities = 59/338 (17%), Positives = 112/338 (33%), Gaps = 86/338 (25%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRN 410
            DF   Q +G+GGFG V++   +  +   A+KR+   +++  +E    EVK +++L H  
Sbjct: 6   TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65

Query: 411 LVQLLG------WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFR-----------Y 453
           +V+             ++E+  ++    +              + + R            
Sbjct: 66  IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125

Query: 454 KIAQDLASGLLYLQEEW---------------------------------------EQCV 474
           ++        LY+Q +                                         + +
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGL 185

Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA-----------GTMGYMAP 523
           +HRD+K SNI    +   K+GDFGL   ++  +  QT +             GT  YM+P
Sbjct: 186 MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP 245

Query: 524 ECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD 583
           E       S + D++S G++  E+         +       ++           +     
Sbjct: 246 EQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-----RIIT---------DVRNLKF 291

Query: 584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIH 621
           P L      Q  E +M+       P    RP    +I 
Sbjct: 292 PLLFTQKYPQ--EHMMV--QDMLSPSPTERPEATDIIE 325

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  123 bits (310), Expect = 8e-30
 Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 11/249 (4%)

Query: 311 GRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFND----DQKLGQGGFG 366
           G    E  +      +   + +       K++  + + +  +   D     ++LG G FG
Sbjct: 112 GYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFG 171

Query: 367 GVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL 426
            V++   R T +  A K V    +   +    E++ +S LRH  LV L     +  E+++
Sbjct: 172 VVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 231

Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           +YEFM  G L   +  E++ ++ +   +  + +  GL ++    E   VH D+K  NIM 
Sbjct: 232 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMF 288

Query: 487 DSNFNA--KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVA 544
            +  +   K+ DFGL   ++        V  GT  + APE A        +D++S G+++
Sbjct: 289 TTKRSNELKLIDFGLTAHLD--PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLS 346

Query: 545 LEIACGRKP 553
             +  G  P
Sbjct: 347 YILLSGLSP 355

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  120 bits (303), Expect = 8e-30
 Identities = 54/248 (21%), Positives = 104/248 (41%), Gaps = 17/248 (6%)

Query: 312 RKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFND----DQKLGQGGFGG 367
           + R + D      + ++ +D +      K++  + + +      D     ++LG G FG 
Sbjct: 13  KVRGKYDGPKINDYDKFYEDIW------KKYVPQPVEVKQGSVYDYYDILEELGSGAFGV 66

Query: 368 VYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV 427
           V++   + T      K ++           +E+ I+++L H  L+ L     +K E++L+
Sbjct: 67  VHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126

Query: 428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD 487
            EF+  G L   +  E+  ++        +    GL ++    E  +VH DIK  NIM +
Sbjct: 127 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCE 183

Query: 488 SNFNA--KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVAL 545
           +   +  KI DFGLA  +         V   T  + APE          +D+++ G++  
Sbjct: 184 TKKASSVKIIDFGLATKLNP--DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGY 241

Query: 546 EIACGRKP 553
            +  G  P
Sbjct: 242 VLLSGLSP 249

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  121 bits (306), Expect = 2e-29
 Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 28/226 (12%)

Query: 351 TNDFNDD----QKLGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKEYASEVKIIS 404
               ++     +KLG G +G V     + T+   A+K +  +  S     +   EV ++ 
Sbjct: 32  KGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLK 91

Query: 405 RLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY------KIAQD 458
            L H N+++L  +  +K+   LV E    G L   +           ++       I + 
Sbjct: 92  LLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM-------KFNEVDAAVIIKQ 144

Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLA 515
           + SG+ YL    +  +VHRD+K  N++L+S   +   KI DFGL+ + E     +     
Sbjct: 145 VLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE--NQKKMKERL 199

Query: 516 GTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQG 561
           GT  Y+APE     K  ++ DV+S G++   +  G  P   +  Q 
Sbjct: 200 GTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE 244

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  120 bits (304), Expect = 3e-29
 Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 29/219 (13%)

Query: 351 TNDFNDD----QKLGQGGFGGVYKGFFRETNSYIAVKRVSQ---GSKQGIKEYASEVKII 403
           T  F+D     + LG+G FG V     + T    AVK +S+     K   +    EV+++
Sbjct: 21  TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 80

Query: 404 SRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY------KIAQ 457
            +L H N+++L  +  +K    LV E    G L   +           R+      +I +
Sbjct: 81  KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-------RFSEVDAARIIR 133

Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVL 514
            + SG+ Y+    +  +VHRD+K  N++L+S   + N +I DFGL+   E     +    
Sbjct: 134 QVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDK 188

Query: 515 AGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
            GT  Y+APE    G   ++ DV+S G++   +  G  P
Sbjct: 189 IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPP 226

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  116 bits (294), Expect = 4e-29
 Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 21/207 (10%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS----------EVKIISRL 406
            + +G+GG G VY+         +A+K +S+         +S          E +   RL
Sbjct: 39  RRLVGRGGMGDVYEAEDTVRERIVALKLMSE-------TLSSDPVFRTRMQREARTAGRL 91

Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYL 466
           +  ++V +  +     +L +    +    L + L +    L       I + + S L   
Sbjct: 92  QEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAML-RRQGPLAPPRAVAIVRQIGSALDAA 150

Query: 467 QEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECA 526
                    HRD+K  NI++ ++  A + DFG+A      K +Q     GT+ YMAPE  
Sbjct: 151 HA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERF 207

Query: 527 TTGKASKESDVYSFGIVALEIACGRKP 553
           +   A+  +D+Y+   V  E   G  P
Sbjct: 208 SESHATYRADIYALTCVLYECLTGSPP 234

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  117 bits (295), Expect = 8e-29
 Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 13/214 (6%)

Query: 339 PKRFPYKELALATNDFNDD------QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQG 392
           P  F ++ +       N        + LG G FG V+K     T   +A K +     + 
Sbjct: 70  PAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD 129

Query: 393 IKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFR 452
            +E  +E+ ++++L H NL+QL      K +++LV E++  G L   +  E+  LT    
Sbjct: 130 KEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT 189

Query: 453 YKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA--KIGDFGLARLVEHAKGSQ 510
               + +  G+ ++    +  ++H D+K  NI+  +      KI DFGLAR  +     +
Sbjct: 190 ILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP--REK 244

Query: 511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVA 544
             V  GT  ++APE       S  +D++S G++A
Sbjct: 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIA 278

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  116 bits (292), Expect = 2e-28
 Identities = 50/376 (13%), Positives = 96/376 (25%), Gaps = 78/376 (20%)

Query: 312 RKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATN---DFNDDQKLGQGGFGGV 368
           R  +      ++      D            P++  +              LGQ      
Sbjct: 30  RIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAY 89

Query: 369 YKGFFRETNSYIAVKRVSQGSKQG---IKEYASEVKIISRLR------------------ 407
            +   +ET     V       +     IK+   EV  +  LR                  
Sbjct: 90  LEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 149

Query: 408 -------HRNLVQLLGWCHEK--KELLLVYEFM--PNGSLDSHLF---KENSLLTWEFRY 453
                   + ++++     +        +Y  M     +    L      +  L    R 
Sbjct: 150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARL 209

Query: 454 KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV 513
           ++   +   L  L       +VH  ++  +I+LD      +  F         +     V
Sbjct: 210 QLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLV-----RDGARVV 261

Query: 514 LAGTMGYMAPE-----------CATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ 562
            + + G+  PE                  +   D ++ G+V   I C   PI   A  G 
Sbjct: 262 SSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGG 321

Query: 563 VSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHV 622
                  W       +     P+  R      +E  +          +  R    Q +  
Sbjct: 322 SE-----WIFRSCKNI-----PQPVRAL----LEGFL-------RYPKEDRLLPLQAMET 360

Query: 623 LNFEAPLPALPPKMPV 638
             +E     L   +P+
Sbjct: 361 PEYEQLRTELSAALPL 376

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  118 bits (297), Expect = 2e-28
 Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 39/229 (17%)

Query: 351 TNDFNDD----QKLGQGGFGGVYKGFFRETNSYIAVKRVS-------------QGSKQGI 393
                +     +KLG G +G V     +  +S  A+K +              +  ++  
Sbjct: 31  EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFH 90

Query: 394 KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY 453
           +E  +E+ ++  L H N+++L     +KK   LV EF   G L   +   +       ++
Sbjct: 91  EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-------KF 143

Query: 454 ------KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVE 504
                  I + + SG+ YL    +  +VHRDIK  NI+L++     N KI DFGL+    
Sbjct: 144 DECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200

Query: 505 HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
             K  +     GT  Y+APE     K +++ DV+S G++   + CG  P
Sbjct: 201 --KDYKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPP 246

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  113 bits (286), Expect = 5e-28
 Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 13/206 (6%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVK--RVSQGSKQG-IKEYASEVKIISRLRHRNLVQ 413
            + LG GG   V+       +  +AVK  R            +  E +  + L H  +V 
Sbjct: 17  GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76

Query: 414 LL--GWCHEKKELL--LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
           +   G        L  +V E++   +L   +      +T +   ++  D    L      
Sbjct: 77  VYDTGEAETPAGPLPYIVMEYVDGVTLRDIV-HTEGPMTPKRAIEVIADACQAL---NFS 132

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS--QTTVLAGTMGYMAPECAT 527
            +  ++HRD+K +NIM+ +    K+ DFG+AR +  +  S  QT  + GT  Y++PE A 
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192

Query: 528 TGKASKESDVYSFGIVALEIACGRKP 553
                  SDVYS G V  E+  G  P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP 218

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  114 bits (287), Expect = 5e-28
 Identities = 51/258 (19%), Positives = 95/258 (36%), Gaps = 58/258 (22%)

Query: 351 TNDFNDD----QKLGQGGFGGVYKGFFRETNSYIAVK-----RVSQGSKQGIKEYASEVK 401
             +          +GQG +G V      +T +  A+K     ++ Q + + ++   +EV+
Sbjct: 21  LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVR 80

Query: 402 IISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL------------------------- 436
           ++ +L H N+ +L     +++ + LV E    G L                         
Sbjct: 81  LMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140

Query: 437 --------DSHLFKENSLLTWEFRY------KIAQDLASGLLYLQEEWEQCVVHRDIKSS 482
                     +        + +F         I + + S L YL     Q + HRDIK  
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPE 197

Query: 483 NIMLDSNFNA--KIGDFGLARLVEHAKGSQTTVL---AGTMGYMAPE--CATTGKASKES 535
           N +  +N +   K+ DFGL++        +   +   AGT  ++APE    T      + 
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257

Query: 536 DVYSFGIVALEIACGRKP 553
           D +S G++   +  G  P
Sbjct: 258 DAWSAGVLLHLLLMGAVP 275

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  113 bits (285), Expect = 6e-28
 Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 14/209 (6%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI---KEYA---SEVKIISR 405
            DF   + LG+G F  V       T+   A+K +    K+ I    +      E  ++SR
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVTRERDVMSR 86

Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
           L H   V+L     + ++L     +  NG L  ++ K  S      R+  A+ + S L Y
Sbjct: 87  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE-IVSALEY 145

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTV-LAGTMGYMAPE 524
           L     + ++HRD+K  NI+L+ + + +I DFG A+++             GT  Y++PE
Sbjct: 146 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 202

Query: 525 CATTGKASKESDVYSFGIVALEIACGRKP 553
             T   A K SD+++ G +  ++  G  P
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPP 231

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  116 bits (293), Expect = 6e-28
 Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 28/218 (12%)

Query: 351 TNDFNDD----QKLGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKEYASEVKIIS 404
              F +       LG+G FG V K   R T    AVK +  +    +       EV+++ 
Sbjct: 17  QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK 76

Query: 405 RLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY------KIAQD 458
           +L H N+++L     +     +V E    G L   + K         R+      +I + 
Sbjct: 77  KLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-------RFSEHDAARIIKQ 129

Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLA 515
           + SG+ Y+    +  +VHRD+K  NI+L+S   + + KI DFGL+   +  + ++     
Sbjct: 130 VFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRI 184

Query: 516 GTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           GT  Y+APE    G   ++ DV+S G++   +  G  P
Sbjct: 185 GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  117 bits (294), Expect = 1e-27
 Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 14/243 (5%)

Query: 318 DEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETN 377
                  F ++I+ +        +     + L  NDF+  + +G+GGFG VY     +T 
Sbjct: 155 QNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTG 214

Query: 378 SYIAVKRVSQG---SKQGIKEYASEVKI---ISRLRHRNLVQLLGWCHEKKELLLVYEFM 431
              A+K + +     KQG     +E  +   +S      +V +    H   +L  + + M
Sbjct: 215 KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM 274

Query: 432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN 491
             G L  HL +       + R+  A+ +  GL ++     + VV+RD+K +NI+LD + +
Sbjct: 275 NGGDLHYHLSQHGVFSEADMRFYAAE-IILGLEHMHN---RFVVYRDLKPANILLDEHGH 330

Query: 492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACG 550
            +I D GLA   + +K  +     GT GYMAPE    G A    +D +S G +  ++  G
Sbjct: 331 VRISDLGLA--CDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387

Query: 551 RKP 553
             P
Sbjct: 388 HSP 390

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  111 bits (280), Expect = 3e-27
 Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 26/216 (12%)

Query: 351 TNDFNDD----QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL 406
           T +        + LG G F  V+    R T    A+K + +          +E+ ++ ++
Sbjct: 4   TTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI 63

Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY------KIAQDLA 460
           +H N+V L           LV + +  G L   + +          Y       + Q + 
Sbjct: 64  KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV-------YTEKDASLVIQQVL 116

Query: 461 SGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLAGT 517
           S + YL    E  +VHRD+K  N++  +   N    I DFGL+++ +       +   GT
Sbjct: 117 SAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ---NGIMSTACGT 170

Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
            GY+APE       SK  D +S G++   + CG  P
Sbjct: 171 PGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  113 bits (285), Expect = 3e-27
 Identities = 54/238 (22%), Positives = 101/238 (42%), Gaps = 30/238 (12%)

Query: 339 PKRFPYKELA-----LATNDFNDD----QKLGQGGFGGVYKGFFRETNSYIAVK-----R 384
            K F + +L      +      D+    + LG G  G V   F R+T   +A++     +
Sbjct: 113 NKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRK 172

Query: 385 VSQGSKQGIKEYAS---EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF 441
            + GS +      +   E++I+ +L H  ++++  +  + ++  +V E M  G L   + 
Sbjct: 173 FAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVV 231

Query: 442 KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFG 498
               L     +      +   + YL    E  ++HRD+K  N++L S   +   KI DFG
Sbjct: 232 GNKRLKEATCK-LYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 287

Query: 499 LARLVEHAKGSQTTVLAGTMGYMAPE---CATTGKASKESDVYSFGIVALEIACGRKP 553
            ++++   + S    L GT  Y+APE      T   ++  D +S G++      G  P
Sbjct: 288 HSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  110 bits (278), Expect = 3e-27
 Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 22/215 (10%)

Query: 351 TNDFNDD----QKLGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKEYASEVKIIS 404
              F +       LG+G FG V K   R T    AVK +  +    +       EV+++ 
Sbjct: 17  QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK 76

Query: 405 RLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF---KENSLLTWEFRYKIAQDLAS 461
           +L H N+++L     +     +V E    G     LF    +    +     +I + + S
Sbjct: 77  KLDHPNIMKLFEILEDSSSFYIVGELYTGGE----LFDEIIKRKRFSEHDAARIIKQVFS 132

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLAGTM 518
           G+ Y+    +  +VHRD+K  NI+L+S   + + KI DFGL+   +  + ++     GT 
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRIGTA 187

Query: 519 GYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
            Y+APE    G   ++ DV+S G++   +  G  P
Sbjct: 188 YYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  113 bits (285), Expect = 4e-27
 Identities = 66/305 (21%), Positives = 114/305 (37%), Gaps = 63/305 (20%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRN 410
           N    ++ LG G  G V           +AVKR+             E+K+++    H N
Sbjct: 15  NLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRML---IDFCDIALMEIKLLTESDDHPN 70

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLD-----SHLFKENSLLTWEFRYK-IAQDLASGLL 464
           +++        + L +  E   N +L       ++  EN  L  E+    + + +ASG+ 
Sbjct: 71  VIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129

Query: 465 YLQEEWEQCVVHRDIKSSNIMLDS-------------NFNAKIGDFGLARLVEHAKGSQT 511
           +L       ++HRD+K  NI++ +             N    I DFGL + ++  + S  
Sbjct: 130 HLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR 186

Query: 512 TVL---AGTMGYMAPE-------CATTGKASKESDVYSFGIVALEIACGRKP-------I 554
           T L   +GT G+ APE         T  + ++  D++S G V   I    K         
Sbjct: 187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246

Query: 555 NPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRP 614
                +G  SL +    L+    + EA       D     I +++         D   RP
Sbjct: 247 ESNIIRGIFSLDEMKC-LHDRSLIAEA------TDL----ISQMI-------DHDPLKRP 288

Query: 615 SIRQV 619
           +  +V
Sbjct: 289 TAMKV 293

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  110 bits (276), Expect = 6e-27
 Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 25/218 (11%)

Query: 351 TNDFND----DQKLGQGGFGGVYKGFFRETNSYIAVKRVS-QGSKQGIKEYASEVKIISR 405
               +D     +KLG G FG V+    R +     +K ++   S+  +++  +E++++  
Sbjct: 17  QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKS 76

Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSL-DSHLFKENSLLTWEFRY------KIAQD 458
           L H N++++     +   + +V E    G L +  +  +                ++ + 
Sbjct: 77  LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQAR----GKALSEGYVAELMKQ 132

Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLA 515
           + + L Y      Q VVH+D+K  NI+      +   KI DFGLA L +      +T  A
Sbjct: 133 MMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK--SDEHSTNAA 187

Query: 516 GTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           GT  YMAPE       + + D++S G+V   +  G  P
Sbjct: 188 GTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTGCLP 224

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  109 bits (275), Expect = 6e-27
 Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 20/213 (9%)

Query: 351 TNDFND----DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL 406
             D N     +  +G+G +G V     + T    A K++ +   + +  +  E++I+  L
Sbjct: 4   KGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL 63

Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF---KENSLLTWEFRYKIAQDLASGL 463
            H N+++L     +  ++ LV E    G     LF       +       +I +D+ S +
Sbjct: 64  DHPNIIRLYETFEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAV 119

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGY 520
            Y     +  V HRD+K  N +  +   +   K+ DFGLA   +   G       GT  Y
Sbjct: 120 AYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK--PGKMMRTKVGTPYY 174

Query: 521 MAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           ++P+    G    E D +S G++   + CG  P
Sbjct: 175 VSPQ-VLEGLYGPECDEWSAGVMMYVLLCGYPP 206

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  110 bits (278), Expect = 6e-27
 Identities = 43/198 (21%), Positives = 79/198 (39%), Gaps = 12/198 (6%)

Query: 353 DFNDD----QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH 408
           +  +     + LG+G FG V++     +      K V             E+ I++  RH
Sbjct: 2   ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK-VKGTDQVLVKKEISILNIARH 60

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
           RN++ L       +EL++++EF+    +   +      L           +   L +L  
Sbjct: 61  RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH- 119

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNA--KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECA 526
                + H DI+  NI+  +  ++  KI +FG AR ++   G    +L     Y APE  
Sbjct: 120 --SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK--PGDNFRLLFTAPEYYAPEVH 175

Query: 527 TTGKASKESDVYSFGIVA 544
                S  +D++S G + 
Sbjct: 176 QHDVVSTATDMWSLGTLV 193

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  110 bits (276), Expect = 8e-27
 Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 26/224 (11%)

Query: 350 ATNDFNDD----QKLGQGGFGGVYKGFFRETNSYIAVK-----RVSQGSKQGIKE----Y 396
           +T+ F ++    + LG+G    V +   + T    AVK          S + ++E     
Sbjct: 11  STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70

Query: 397 ASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKI 455
             EV I+ ++  H N++QL           LV++ M  G L  +L ++ +L   E R KI
Sbjct: 71  LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KI 129

Query: 456 AQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA 515
            + L   +  L +     +VHRD+K  NI+LD + N K+ DFG +  ++   G +   + 
Sbjct: 130 MRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD--PGEKLREVC 184

Query: 516 GTMGYMAPE------CATTGKASKESDVYSFGIVALEIACGRKP 553
           GT  Y+APE              KE D++S G++   +  G  P
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  110 bits (277), Expect = 9e-27
 Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 17/201 (8%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVK-----RVSQGSKQGIKEYASEVKIISRLRHRNLVQL 414
           +G+G F  V       T   +A+K     +++  S Q +     EV+I+  L H N+V+L
Sbjct: 23  IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF---REVRIMKILNHPNIVKL 79

Query: 415 LGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCV 474
                 +K L L+ E+   G +  +L     +   E R    + + S + Y  +   + +
Sbjct: 80  FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR-SKFRQIVSAVQYCHQ---KRI 135

Query: 475 VHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK--AS 532
           VHRD+K+ N++LD++ N KI DFG +               G   Y APE    GK    
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC--GAPPYAAPE-LFQGKKYDG 192

Query: 533 KESDVYSFGIVALEIACGRKP 553
            E DV+S G++   +  G  P
Sbjct: 193 PEVDVWSLGVILYTLVSGSLP 213

>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 133

 Score =  104 bits (261), Expect = 9e-27
 Identities = 50/141 (35%), Positives = 71/141 (50%), Gaps = 12/141 (8%)

Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNL 206
            VAVEFD Y+N    DP + H+GID+NS++SK    W  D ++G+   A ISYNS +  L
Sbjct: 3   VVAVEFDTYLNPDYGDPNYIHIGIDVNSIRSKVTAKW--DWQNGKIATAHISYNSVSKRL 60

Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLEMD 266
           SV      +       L Y ++L   LPE+V  G S +TG D    +++SW F SSL   
Sbjct: 61  SVTSYYAGSKPAT---LSYDIELHTVLPEWVRVGLSASTGQDKERNTVHSWSFTSSLW-- 115

Query: 267 DETTNPVSNPKRRRKNRTALV 287
              TN        +     ++
Sbjct: 116 ---TNVAKKENENKYITRGVL 133

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  110 bits (278), Expect = 1e-26
 Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 18/218 (8%)

Query: 345 KELALATNDFNDD----QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEV 400
           ++L   +  F D     + +G G +    +   + TN   AVK + + SK+   E   E+
Sbjct: 11  QQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDK-SKRDPTE---EI 66

Query: 401 KIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDL 459
           +I+ R  +H N++ L     + K + +V E M  G L   + ++      E    +   +
Sbjct: 67  EILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREAS-AVLFTI 125

Query: 460 ASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA----KIGDFGLARLVEHAKGSQTTVLA 515
              + YL     Q VVHRD+K SNI+           +I DFG A+ +    G   T   
Sbjct: 126 TKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP-C 181

Query: 516 GTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
            T  ++APE           D++S G++   +  G  P
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  113 bits (285), Expect = 1e-26
 Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 12/246 (4%)

Query: 313 KRKEGDEEDNQGFSEYID-DEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKG 371
            R   +      F++Y+D   F R    K    + +    N F   + LG+GGFG V   
Sbjct: 146 TRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTK--NTFRQYRVLGKGGFGEVCAC 203

Query: 372 FFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY 428
             R T    A K++ +     ++G     +E +I+ ++  R +V L      K  L LV 
Sbjct: 204 QVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263

Query: 429 EFMPNGSLDSHLFKENSLLTWEFRYKI-AQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD 487
             M  G L  H++        E R    A ++  GL  L     + +V+RD+K  NI+LD
Sbjct: 264 TLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLD 320

Query: 488 SNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
            + + +I D GLA  V   +G       GT+GYMAPE     + +   D ++ G +  E+
Sbjct: 321 DHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378

Query: 548 ACGRKP 553
             G+ P
Sbjct: 379 IAGQSP 384

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  111 bits (279), Expect = 1e-26
 Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 18/211 (8%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEY------ASEVKIISR 405
           + F   + +G+G FG V      +T    A+K ++   KQ   E         E++I+  
Sbjct: 15  DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMN---KQKCVERNEVRNVFKELQIMQG 71

Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
           L H  LV L     +++++ +V + +  G L  HL +         +  I + L   L Y
Sbjct: 72  LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICE-LVMALDY 130

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           LQ    Q ++HRD+K  NI+LD + +  I DF +A ++   + +Q T +AGT  YMAPE 
Sbjct: 131 LQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP--RETQITTMAGTKPYMAPEM 185

Query: 526 ATTGKA---SKESDVYSFGIVALEIACGRKP 553
            ++ K    S   D +S G+ A E+  GR+P
Sbjct: 186 FSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  110 bits (276), Expect = 2e-26
 Identities = 62/256 (24%), Positives = 100/256 (39%), Gaps = 29/256 (11%)

Query: 312 RKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFND----DQKLGQGGFGG 367
                G E         +      G       Y       +  +D    + +LG+G    
Sbjct: 9   SGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSI 68

Query: 368 VYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV 427
           VY+   + T    A+K + +      K   +E+ ++ RL H N+++L        E+ LV
Sbjct: 69  VYRCKQKGTQKPYALKVLKK--TVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126

Query: 428 YEFMPNGSL-DSHLFKENSLLTWEFRY------KIAQDLASGLLYLQEEWEQCVVHRDIK 480
            E +  G L D  + K          Y         + +   + YL E     +VHRD+K
Sbjct: 127 LELVTGGELFDRIVEKG--------YYSERDAADAVKQILEAVAYLHE---NGIVHRDLK 175

Query: 481 SSNIML---DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDV 537
             N++      +   KI DFGL+++VEH        + GT GY APE         E D+
Sbjct: 176 PENLLYATPAPDAPLKIADFGLSKIVEH--QVLMKTVCGTPGYCAPEILRGCAYGPEVDM 233

Query: 538 YSFGIVALEIACGRKP 553
           +S GI+   + CG +P
Sbjct: 234 WSVGIITYILLCGFEP 249

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  108 bits (273), Expect = 3e-26
 Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 26/211 (12%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS---------EVKIISRLRH 408
             LG GGFG VY G     N  +A+K V    K  I ++           EV ++ ++  
Sbjct: 49  PLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEVVLLKKVSS 105

Query: 409 R--NLVQLLGWCHEKKELLLVYEF-MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
               +++LL W       +L+ E   P   L   + +  +L     R      +   + +
Sbjct: 106 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRH 164

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSN-FNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE 524
                   V+HRDIK  NI++D N    K+ DFG   L+   K +  T   GT  Y  PE
Sbjct: 165 CHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 218

Query: 525 CATTGK--ASKESDVYSFGIVALEIACGRKP 553
                     + + V+S GI+  ++ CG  P
Sbjct: 219 -WIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  108 bits (271), Expect = 3e-26
 Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 21/205 (10%)

Query: 351 TNDFNDD----QKLGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKEYASEVKIIS 404
           +  F+D+    ++LG+G F  V +   + T    A K +   + S +  ++   E +I  
Sbjct: 1   STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60

Query: 405 RLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF---KENSLLTWEFRYKIAQDLAS 461
           +L+H N+V+L     E+    LV++ +  G     LF         +        Q +  
Sbjct: 61  KLQHPNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQILE 116

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLAGTM 518
            + Y        +VHR++K  N++L S       K+ DFGLA  V           AGT 
Sbjct: 117 SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN--DSEAWHGFAGTP 171

Query: 519 GYMAPECATTGKASKESDVYSFGIV 543
           GY++PE       SK  D+++ G++
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVI 196

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  109 bits (275), Expect = 3e-26
 Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 39/230 (16%)

Query: 350 ATNDFND----DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-------- 397
           A  +F         +G+G    V +   R T    AVK +   +++   E          
Sbjct: 88  AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATR 147

Query: 398 SEVKIISRLR-HRNLVQLLGWCHEKKELLLVYEFMPNGSL-DSHLFKENSLLTWEFRY-- 453
            E  I+ ++  H +++ L+        + LV++ M  G L D    K             
Sbjct: 148 RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV--------ALSE 199

Query: 454 ----KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS 509
                I + L   + +L       +VHRD+K  NI+LD N   ++ DFG +  +E   G 
Sbjct: 200 KETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE--PGE 254

Query: 510 QTTVLAGTMGYMAPE------CATTGKASKESDVYSFGIVALEIACGRKP 553
           +   L GT GY+APE        T     KE D+++ G++   +  G  P
Sbjct: 255 KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  108 bits (272), Expect = 4e-26
 Identities = 53/222 (23%), Positives = 92/222 (41%), Gaps = 31/222 (13%)

Query: 349 LATNDFNDD-------QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVK 401
           +  + F          + LG+G F    K   +++N   AVK +S+  +   ++   E+ 
Sbjct: 1   MKDSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EIT 57

Query: 402 IISRLR-HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRY------K 454
            +     H N+V+L    H++    LV E +  G L   + K+         +       
Sbjct: 58  ALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKH-------FSETEASY 110

Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIML---DSNFNAKIGDFGLARLVEHAKGSQT 511
           I + L S + ++    +  VVHRD+K  N++    + N   KI DFG ARL         
Sbjct: 111 IMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167

Query: 512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           T    T+ Y APE        +  D++S G++   +  G+ P
Sbjct: 168 TP-CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  111 bits (278), Expect = 8e-26
 Identities = 69/247 (27%), Positives = 113/247 (45%), Gaps = 27/247 (10%)

Query: 321 DNQGFSEYID-DEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSY 379
               F E++D   F R    K    + +    + F D + LG+GGFG V+    + T   
Sbjct: 155 GQAPFQEFLDSLYFLRFLQWKWLEAQPMGE--DWFLDFRVLGRGGFGEVFACQMKATGKL 212

Query: 380 IAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSL 436
            A K++++     ++G +    E KI++++  R +V L      K +L LV   M  G +
Sbjct: 213 YACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDI 272

Query: 437 DSHL---------FKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD 487
             H+         F+E         +  AQ + SGL +L +   + +++RD+K  N++LD
Sbjct: 273 RYHIYNVDEDNPGFQEP-----RAIFYTAQ-IVSGLEHLHQ---RNIIYRDLKPENVLLD 323

Query: 488 SNFNAKIGDFGLARLVEHAKGSQTT-VLAGTMGYMAPECATTGKASKESDVYSFGIVALE 546
            + N +I D GLA  VE   G   T   AGT G+MAPE     +     D ++ G+   E
Sbjct: 324 DDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYE 381

Query: 547 IACGRKP 553
           +   R P
Sbjct: 382 MIAARGP 388

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  107 bits (269), Expect = 1e-25
 Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 24/210 (11%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-----------SEVKIISRL 406
             LG G FG V+    +E N  + VK +    K+ + E              E+ I+SR+
Sbjct: 30  SPLGSGAFGFVWTAVDKEKNKEVVVKFIK---KEKVLEDCWIEDPKLGKVTLEIAILSRV 86

Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGS-LDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
            H N++++L     +    LV E   +G  L + + +   L      Y   Q L S + Y
Sbjct: 87  EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ-LVSAVGY 145

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           L+    + ++HRDIK  NI++  +F  K+ DFG A  +E  K   T    GT+ Y APE 
Sbjct: 146 LRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC--GTIEYCAPE- 199

Query: 526 ATTGK--ASKESDVYSFGIVALEIACGRKP 553
              G      E +++S G+    +     P
Sbjct: 200 VLMGNPYRGPELEMWSLGVTLYTLVFEENP 229

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  107 bits (270), Expect = 1e-25
 Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 21/220 (9%)

Query: 336 GAGPKRFPYKELALATNDFNDD----QKLGQGGFGGVYKGFFRETNSYIAVKRV--SQGS 389
           G        + +  A+  F+D+    ++LG+G F  V +   + T    A K +   + S
Sbjct: 9   GGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS 68

Query: 390 KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF---KENSL 446
            +  ++   E +I  +L+H N+V+L     E+    LV++ +  G     LF        
Sbjct: 69  ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREF 124

Query: 447 LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLV 503
            +        Q +   + Y        +VHR++K  N++L S       K+ DFGLA  V
Sbjct: 125 YSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181

Query: 504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIV 543
                      AGT GY++PE       SK  D+++ G++
Sbjct: 182 N--DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVI 219

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  106 bits (267), Expect = 1e-25
 Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 28/211 (13%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS-------EVKIISRLRHRNLV 412
           LG+G +G V +    ET    AVK +    K+ ++   +       E++++ RLRH+N++
Sbjct: 13  LGEGSYGKVKEVLDSETLCRRAVKILK---KKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69

Query: 413 QLLG--WCHEKKELLLVYEFMPNGSLDSHLF---KENSLLTWEFRYKIAQDLASGLLYLQ 467
           QL+   +  EK+++ +V E+   G  +  +     E      +      Q L  GL YL 
Sbjct: 70  QLVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKRFPVCQAHGYFCQ-LIDGLEYLH 126

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS---QTTVLAGTMGYMAPE 524
               Q +VH+DIK  N++L +    KI   G+A  +         +T+   G+  +  PE
Sbjct: 127 S---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS--QGSPAFQPPE 181

Query: 525 CATTGK--ASKESDVYSFGIVALEIACGRKP 553
            A      +  + D++S G+    I  G  P
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  106 bits (268), Expect = 1e-25
 Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 20/208 (9%)

Query: 351 TNDFND----DQKLGQGGFGGVYKGFFRETNSYIAVKRVS------QGSKQGIKEYASEV 400
                D     ++LG G F  V K   + T    A K +              +E   EV
Sbjct: 7   QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66

Query: 401 KIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLA 460
            I+ ++ H N++ L      + +++L+ E +  G L   L ++ SL   E    I Q + 
Sbjct: 67  SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ-IL 125

Query: 461 SGLLYLQEEWEQCVVHRDIKSSNIMLDS----NFNAKIGDFGLARLVEHAKGSQTTVLAG 516
            G+ YL     + + H D+K  NIML        + K+ DFGLA  +E   G +   + G
Sbjct: 126 DGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED--GVEFKNIFG 180

Query: 517 TMGYMAPECATTGKASKESDVYSFGIVA 544
           T  ++APE         E+D++S G++ 
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVIT 208

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  106 bits (266), Expect = 2e-25
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 6/152 (3%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYAS-EVKIISRLRHR 409
             +    K+G+G +G V+K   R+T   +A+K+  +      IK+ A  E++++ +L+H 
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
           NLV LL     K+ L LV+E+  + ++   L +    +       I       + +  + 
Sbjct: 63  NLVNLLEVFRRKRRLHLVFEYCDH-TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR 501
                +HRD+K  NI++  +   K+ DFG AR
Sbjct: 122 N---CIHRDVKPENILITKHSVIKLCDFGFAR 150

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  106 bits (267), Expect = 2e-25
 Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 12/155 (7%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYAS-EVKIISRLRHR 409
             + +   +G+G +G V K   ++T   +A+K+  +    + +K+ A  E+K++ +LRH 
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE 84

Query: 410 NLVQLLGWCHEKKELLLVYEFMPN---GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYL 466
           NLV LL  C +KK   LV+EF+ +     L+      N L     +  + Q + +G+ + 
Sbjct: 85  NLVNLLEVCKKKKRWYLVFEFVDHTILDDLELF---PNGLDYQVVQKYLFQ-IINGIGFC 140

Query: 467 QEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR 501
                  ++HRDIK  NI++  +   K+ DFG AR
Sbjct: 141 HSHN---IIHRDIKPENILVSQSGVVKLCDFGFAR 172

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  105 bits (264), Expect = 2e-25
 Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 13/200 (6%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS-EVKIISRLRHRNLVQLLGWC 418
           LG+G +G V     R T   +AVK V         E    E+ I   L H N+V+  G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74

Query: 419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
            E     L  E+   G L   +  +  +   + +    Q L +G++YL       + HRD
Sbjct: 75  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHG---IGITHRD 130

Query: 479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA---GTMGYMAPECATTGK--ASK 533
           IK  N++LD   N KI DFGLA +  +   ++  +L    GT+ Y+APE     +   ++
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPE-LLKRREFHAE 187

Query: 534 ESDVYSFGIVALEIACGRKP 553
             DV+S GIV   +  G  P
Sbjct: 188 PVDVWSCGIVLTAMLAGELP 207

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  106 bits (266), Expect = 2e-25
 Identities = 65/308 (21%), Positives = 117/308 (37%), Gaps = 55/308 (17%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS---------EVKIISRLR- 407
             LG+GGFG V+ G        +A+K +    +  +  ++          EV ++ ++  
Sbjct: 37  PLLGKGGFGTVFAGHRLTDRLQVAIKVIP---RNRVLGWSPLSDSVTCPLEVALLWKVGA 93

Query: 408 ---HRNLVQLLGWCHEKKELLLVYEF-MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGL 463
              H  +++LL W   ++  +LV E  +P   L  ++ ++  L     R      + + +
Sbjct: 94  GGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSR-CFFGQVVAAI 152

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
            +      + VVHRDIK  NI++D     AK+ DFG   L+        T   GT  Y  
Sbjct: 153 QHCHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTDFDGTRVYSP 206

Query: 523 PECATTGK-ASKESDVYSFGIVALEIACGRKPIN--PKAPQGQVSLLQWVWDLYGNGKLL 579
           PE  +  +  +  + V+S GI+  ++ CG  P     +  + ++     V          
Sbjct: 207 PEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHV---------- 256

Query: 580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHV--LNFEAPLPALPPKMP 637
                  C       I R +        P    RPS+ +++    +   A    L P   
Sbjct: 257 ----SPDCCAL----IRRCLAP-----KPSS--RPSLEEILLDPWMQTPAEDVPLNPSKG 301

Query: 638 VPTYLSPP 645
            P  L+  
Sbjct: 302 GPAPLAWS 309

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  107 bits (268), Expect = 2e-25
 Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 20/208 (9%)

Query: 351 TNDFND----DQKLGQGGFGGVYKGFFRETNSYIAVK------RVSQGSKQGIKEYASEV 400
                D     ++LG G F  V K   + T    A K        +       +E   EV
Sbjct: 7   QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREV 66

Query: 401 KIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLA 460
            I+ ++ H N++ L      + +++L+ E +  G L   L ++ SL   E    I Q + 
Sbjct: 67  SILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ-IL 125

Query: 461 SGLLYLQEEWEQCVVHRDIKSSNIMLDS----NFNAKIGDFGLARLVEHAKGSQTTVLAG 516
            G+ YL     + + H D+K  NIML        + K+ DFGLA  +E   G +   + G
Sbjct: 126 DGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED--GVEFKNIFG 180

Query: 517 TMGYMAPECATTGKASKESDVYSFGIVA 544
           T  ++APE         E+D++S G++ 
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVIT 208

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  105 bits (265), Expect = 3e-25
 Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 17/176 (9%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRNLVQLLG 416
           +KLG G +  VYKG  + T  Y+A+K V   S++G    A  E+ ++  L+H N+V+L  
Sbjct: 11  EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70

Query: 417 WCHEKKELLLVYEFMPN---GSLDSH--LFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
             H + +L LV+EFM N     +DS         L     +Y   Q L  GL +  E   
Sbjct: 71  VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ-LLQGLAFCHENK- 128

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT---TVLAGTMGYMAPE 524
             ++HRD+K  N++++     K+GDFGLAR    A G      +    T+ Y AP+
Sbjct: 129 --ILHRDLKPQNLLINKRGQLKLGDFGLAR----AFGIPVNTFSSEVVTLWYRAPD 178

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  105 bits (265), Expect = 3e-25
 Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 31/216 (14%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVK-----RVSQGSKQGIKEYAS---EVKIISRLRH 408
            + LG G  G V   F R+T   +A+K     + + GS +      +   E++I+ +L H
Sbjct: 15  SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSL-----DSHLFKENSLLTWEFRYKIAQDLASGL 463
             ++++  +  + ++  +V E M  G L      +   KE        +      +   +
Sbjct: 75  PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA-----TCK-LYFYQMLLAV 127

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGY 520
            YL    E  ++HRD+K  N++L S   +   KI DFG ++++   + S    L GT  Y
Sbjct: 128 QYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTY 182

Query: 521 MAPE---CATTGKASKESDVYSFGIVALEIACGRKP 553
           +APE      T   ++  D +S G++      G  P
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  105 bits (265), Expect = 6e-25
 Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 23/211 (10%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVK-----RVSQGSKQGIKEYASEVKIISRLRHRNLV 412
           + +G+G F  V +   RET    AVK     + +       ++   E  I   L+H ++V
Sbjct: 30  EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89

Query: 413 QLLGWCHEKKELLLVYEFMPNGSL-DSHLFKENSLLTWEFRY------KIAQDLASGLLY 465
           +LL        L +V+EFM    L    + + ++     F Y         + +   L Y
Sbjct: 90  ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA----GFVYSEAVASHYMRQILEALRY 145

Query: 466 LQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
                +  ++HRD+K   ++L S   +   K+G FG+A  +  +         GT  +MA
Sbjct: 146 CH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR-VGTPHFMA 201

Query: 523 PECATTGKASKESDVYSFGIVALEIACGRKP 553
           PE        K  DV+  G++   +  G  P
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLP 232

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  104 bits (263), Expect = 6e-25
 Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 12/177 (6%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRN 410
             +    KLG+G +  VYKG  + T++ +A+K +    ++G    A  EV ++  L+H N
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           +V L    H +K L LV+E++    L  +L    +++           L  GL Y   + 
Sbjct: 62  IVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT---TVLAGTMGYMAPE 524
              V+HRD+K  N++++     K+ DFGLAR    AK   T        T+ Y  P+
Sbjct: 121 ---VLHRDLKPQNLLINERGELKLADFGLAR----AKSIPTKTYDNEVVTLWYRPPD 170

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  104 bits (262), Expect = 7e-25
 Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 13/200 (6%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS-EVKIISRLRHRNLVQLLGWC 418
           LG+G +G V     R T   +AVK V         E    E+ I   L H N+V+  G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74

Query: 419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD 478
            E     L  E+   G L   +  +  +   + +    Q L +G++YL       + HRD
Sbjct: 75  REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ-LMAGVVYLHG---IGITHRD 130

Query: 479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLA---GTMGYMAPECATTGK--ASK 533
           IK  N++LD   N KI DFGLA +  +   ++  +L    GT+ Y+APE     +   ++
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPE-LLKRREFHAE 187

Query: 534 ESDVYSFGIVALEIACGRKP 553
             DV+S GIV   +  G  P
Sbjct: 188 PVDVWSCGIVLTAMLAGELP 207

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  103 bits (260), Expect = 8e-25
 Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 51/234 (21%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVK--------RVSQGSKQGIKEYAS----------- 398
            ++G+G +G V   +    N+Y A+K        R +   ++                  
Sbjct: 19  DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRG 78

Query: 399 -------EVKIISRLRHRNLVQLLGWCHE------KKELLLVYEFMPNGSLDSHLF---K 442
                  E+ I+ +L H N+V+L     E      +  L +V+E +  G     +     
Sbjct: 79  PIEQVYQEIAILKKLDHPNVVKL----VEVLDDPNEDHLYMVFELVNQGP----VMEVPT 130

Query: 443 ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL 502
              L   + R    QDL  G+ YL     Q ++HRDIK SN+++  + + KI DFG++  
Sbjct: 131 LKPLSEDQAR-FYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186

Query: 503 VEHAKGSQTTVLAGTMGYMAPE-CATTGK--ASKESDVYSFGIVALEIACGRKP 553
            + +    +    GT  +MAPE  + T K  + K  DV++ G+       G+ P
Sbjct: 187 FKGSDALLSNT-VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  108 bits (271), Expect = 9e-25
 Identities = 41/212 (19%), Positives = 73/212 (34%), Gaps = 20/212 (9%)

Query: 357 DQKLGQGGFGGVYKGF-FRETNSYIAVKRV-SQGSKQGIKEYASEVKIISRLRHRNLVQL 414
              +  GG G +Y           + +K +   G  +      +E + ++ + H ++VQ+
Sbjct: 85  KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQI 144

Query: 415 L-----GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
                    H      +V E++   SL          L          ++   L YL   
Sbjct: 145 FNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK---GQKLPVAEAIAYLLEILPALSYLHS- 200

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG 529
               +V+ D+K  NIML      K+ D G    +     +    L GT G+ APE     
Sbjct: 201 --IGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI-----NSFGYLYGTPGFQAPEIVR-T 251

Query: 530 KASKESDVYSFGIVALEIACGRKPINPKAPQG 561
             +  +D+Y+ G     +       N +   G
Sbjct: 252 GPTVATDIYTVGRTLAALTLDLPTRNGRYVDG 283

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  103 bits (260), Expect = 1e-24
 Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 14/205 (6%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYA-SEVKIISRLRHRNLVQLL 415
           +K+G+G +G V+K   RET+  +A+KRV      +G+   A  E+ ++  L+H+N+V+L 
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67

Query: 416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVV 475
              H  K+L LV+EF     L  +    N  L  E        L  GL +        V+
Sbjct: 68  DVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VL 123

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT---TVLAGTMGYMAPECATTGKA- 531
           HRD+K  N++++ N   K+ +FGLAR    A G      +    T+ Y  P+     K  
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLAR----AFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179

Query: 532 SKESDVYSFGIVALEIACGRKPINP 556
           S   D++S G +  E+A   +P+ P
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFP 204

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  103 bits (259), Expect = 1e-24
 Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 20/206 (9%)

Query: 353 DFND----DQKLGQGGFGGVYKGFFRETNSYIAVK------RVSQGSKQGIKEYASEVKI 402
              D     ++LG G F  V K   + T    A K        S       +E   EV I
Sbjct: 2   MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61

Query: 403 ISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASG 462
           +  +RH N++ L      K +++L+ E +  G L   L ++ SL   E   +  + +  G
Sbjct: 62  LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT-QFLKQILDG 120

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDS----NFNAKIGDFGLARLVEHAKGSQTTVLAGTM 518
           + YL     + + H D+K  NIML      N   K+ DFG+A  +E   G++   + GT 
Sbjct: 121 VHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA--GNEFKNIFGTP 175

Query: 519 GYMAPECATTGKASKESDVYSFGIVA 544
            ++APE         E+D++S G++ 
Sbjct: 176 EFVAPEIVNYEPLGLEADMWSIGVIT 201

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  104 bits (261), Expect = 1e-24
 Identities = 56/223 (25%), Positives = 91/223 (40%), Gaps = 24/223 (10%)

Query: 351 TNDFNDD-----QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISR 405
           +  F D        LG+G    V       T+   AVK + +           EV+++ +
Sbjct: 7   SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQ 66

Query: 406 LR-HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLL 464
            + HRN+++L+ +  E+    LV+E M  GS+ SH+ K       E    + QD+AS L 
Sbjct: 67  CQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS-VVVQDVASALD 125

Query: 465 YLQEEWEQCVVHRDIKSSNIML---DSNFNAKIGDFGLARLVEHAKGSQTTV------LA 515
           +L     + + HRD+K  NI+    +     KI DF L   ++                 
Sbjct: 126 FLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC 182

Query: 516 GTMGYMAPE-----CATTGKASKESDVYSFGIVALEIACGRKP 553
           G+  YMAPE             K  D++S G++   +  G  P
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  105 bits (265), Expect = 1e-24
 Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 20/215 (9%)

Query: 351 TNDFNDD----QKLGQGGFGGVYKGFFRETNSYIAVK--RVSQGSKQGIKEYASEVKIIS 404
              F ++    ++LG+G F  V +          A       + S +  ++   E +I  
Sbjct: 6   CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICR 65

Query: 405 RLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF---KENSLLTWEFRYKIAQDLAS 461
            L+H N+V+L     E+    L+++ +  G L    F         +        Q +  
Sbjct: 66  LLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILE 121

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTTVLAGTM 518
            +L+  +     VVHR++K  N++L S       K+ DFGLA  VE  + +     AGT 
Sbjct: 122 AVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF-AGTP 177

Query: 519 GYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           GY++PE        K  D+++ G++   +  G  P
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  103 bits (259), Expect = 2e-24
 Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 17/206 (8%)

Query: 351 TNDFND-----DQKLGQGGFGGVYKGFFRETNSYIAVK--RVSQGSKQGIKEYASEVKII 403
             +FN+      ++LG+G F  V +   + T    A K  +  +  +    E   E+ ++
Sbjct: 23  MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVL 82

Query: 404 SRLRHR-NLVQLLGWCHEKKELLLVYEFMPNGSL-DSHLFKENSLLTWEFRYKIAQDLAS 461
              +    ++ L        E++L+ E+   G +    L +   +++     ++ + +  
Sbjct: 83  ELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILE 142

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIML---DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM 518
           G+ YL    +  +VH D+K  NI+L       + KI DFG++R + H    +   + GT 
Sbjct: 143 GVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH--ACELREIMGTP 197

Query: 519 GYMAPECATTGKASKESDVYSFGIVA 544
            Y+APE       +  +D+++ GI+A
Sbjct: 198 EYLAPEILNYDPITTATDMWNIGIIA 223

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  103 bits (259), Expect = 2e-24
 Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 25/217 (11%)

Query: 351 TNDFNDD-----QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISR 405
                DD     Q LG G  G V + F R T    A+K +        ++   EV    +
Sbjct: 23  KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYD--SPKARQ---EVDHHWQ 77

Query: 406 L-RHRNLVQLLGWC----HEKKELLLVYEFMPNGSL-DSHLFKENSLLTWEFRYKIAQDL 459
                ++V +L       H K+ LL++ E M  G L      + +   T     +I +D+
Sbjct: 78  ASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 137

Query: 460 ASGLLYLQEEWEQCVVHRDIKSSNIML---DSNFNAKIGDFGLARLVEHAKGSQTTVLAG 516
            + + +L       + HRD+K  N++    + +   K+ DFG A+       +  T    
Sbjct: 138 GTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ--NALQTP-CY 191

Query: 517 TMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           T  Y+APE     K  K  D++S G++   + CG  P
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 228

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  102 bits (256), Expect = 2e-24
 Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 26/206 (12%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS------EVKIISRLRHRNLVQ 413
           LG G FG V  G  + T   +AVK ++   +Q I+          E++ +   RH ++++
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75

Query: 414 LLGWCHE----KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
           L    ++      +  +V E++  G L  ++ K   +   E R    Q + S + Y    
Sbjct: 76  L----YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQ-ILSAVDYCHR- 129

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG 529
               VVHRD+K  N++LD++ NAKI DFGL+ ++   +  +T+   G+  Y APE   +G
Sbjct: 130 --HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPE-VISG 184

Query: 530 K--ASKESDVYSFGIVALEIACGRKP 553
           +  A  E D++S G++   + CG  P
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLP 210

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  103 bits (259), Expect = 3e-24
 Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 9/155 (5%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS-----EVKIISRL 406
             +     LG+G F  VYK   + TN  +A+K++  G +   K+  +     E+K++  L
Sbjct: 10  KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69

Query: 407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYL 466
            H N++ LL     K  + LV++FM    L+  +   + +LT             GL YL
Sbjct: 70  SHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL 128

Query: 467 QEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR 501
            + W   ++HRD+K +N++LD N   K+ DFGLA+
Sbjct: 129 HQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK 160

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  103 bits (258), Expect = 4e-24
 Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 21/246 (8%)

Query: 314 RKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFF 373
           +K  ++E  + F     ++F +          +L    + F+  + LG G FG V     
Sbjct: 7   KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKH 62

Query: 374 RETNSYIAVKRVSQGSKQGI---KEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLV 427
           +E+ ++ A+K +    KQ +   K+     +E +I+  +    LV+L     +   L +V
Sbjct: 63  KESGNHYAMKILD---KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119

Query: 428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD 487
            E++  G + SHL +         R+  AQ +     YL       +++RD+K  N+++D
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLID 175

Query: 488 SNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
                ++ DFG A+ V+     +T  L GT   +APE   +   +K  D ++ G++  E+
Sbjct: 176 QQGYIQVTDFGFAKRVK----GRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231

Query: 548 ACGRKP 553
           A G  P
Sbjct: 232 AAGYPP 237

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  102 bits (257), Expect = 4e-24
 Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 14/177 (7%)

Query: 334 ERGAGPKRFPYKELALATN--DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-K 390
            +  GP          AT+   +    KLG+G +G VYK     TN  +A+KR+     +
Sbjct: 14  AQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE 73

Query: 391 QGIKEYAS-EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTW 449
           +G+   A  EV ++  L+HRN+++L    H    L L++E+  N  L  ++ K   +   
Sbjct: 74  EGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMR 132

Query: 450 EFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA-----KIGDFGLAR 501
             +  + Q L +G+ +         +HRD+K  N++L  +  +     KIGDFGLAR
Sbjct: 133 VIKSFLYQ-LINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score =  101 bits (255), Expect = 6e-24
 Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 11/149 (7%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYA-SEVKIISRLRHRNLVQLL 415
           +K+G+G +G VYK   + T   +A+K++   +  +G+   A  E+ ++  L H N+V+LL
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68

Query: 416 GWCHEKKELLLVYEFMPN---GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
              H + +L LV+EF+       +D+       +     +  + Q L  GL +       
Sbjct: 69  DVIHTENKLYLVFEFLHQDLKKFMDAS--ALTGIPLPLIKSYLFQ-LLQGLAFCHSHR-- 123

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLAR 501
            V+HRD+K  N+++++    K+ DFGLAR
Sbjct: 124 -VLHRDLKPQNLLINTEGAIKLADFGLAR 151

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  100 bits (252), Expect = 2e-23
 Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 26/211 (12%)

Query: 351 TNDFND----DQKLGQGGFGGVYKGFFRETNSYIAVKRV------SQGSKQGIKEYASEV 400
             + +D     ++LG G F  V K   + T    A K +      S       ++   EV
Sbjct: 6   QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65

Query: 401 KIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF---KENSLLTWEFRYKIAQ 457
            I+  ++H N++ L      K +++L+ E +  G     LF    E   LT E   +  +
Sbjct: 66  SILKEIQHPNVITLHEVYENKTDVILILELVAGGE----LFDFLAEKESLTEEEATEFLK 121

Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDS----NFNAKIGDFGLARLVEHAKGSQTTV 513
            + +G+ YL       + H D+K  NIML          KI DFGLA  ++   G++   
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GNEFKN 176

Query: 514 LAGTMGYMAPECATTGKASKESDVYSFGIVA 544
           + GT  ++APE         E+D++S G++ 
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  100 bits (252), Expect = 3e-23
 Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 25/204 (12%)

Query: 339 PKRFPYKELAL--ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKE 395
            K++   E       + +    K+GQG FG V+K   R+T   +A+K+V   + K+G   
Sbjct: 2   AKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 61

Query: 396 YAS-EVKIISRLRHRNLVQLLGWCHEKKE--------LLLVYEFMPN---GSLDSHLFKE 443
            A  E+KI+  L+H N+V L+  C  K          + LV++F  +   G L + L K 
Sbjct: 62  TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK- 120

Query: 444 NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV 503
               T     ++ Q L +GL Y+       ++HRD+K++N+++  +   K+ DFGLAR  
Sbjct: 121 ---FTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF 174

Query: 504 EHAKGSQTTVLAG---TMGYMAPE 524
             AK SQ         T+ Y  PE
Sbjct: 175 SLAKNSQPNRYTNRVVTLWYRPPE 198

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237

 Score = 98.0 bits (243), Expect = 3e-23
 Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 7/135 (5%)

Query: 148 PFVAVEFDVYVNS--WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHN 205
             VAVE D Y N+   DP++ H+GIDI SV+SKK   W  ++++G+   A I YNS    
Sbjct: 3   TIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKW--NMQNGKVGTAHIIYNSVDKR 60

Query: 206 LSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLEM 265
           LS   +    +      + Y VDL   LPE+V  G S +TG+     +I SW F S L+ 
Sbjct: 61  LSAVVSYPNADSAT---VSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLKS 117

Query: 266 DDETTNPVSNPKRRR 280
           +        +    +
Sbjct: 118 NSTHETNALHFMFNQ 132

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237

 Score = 79.9 bits (196), Expect = 5e-17
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 9/129 (6%)

Query: 19  TITISFCLTIIPLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQL-------PANRET 71
           + T           +AL F +  FS    D I    A   ++  ++L            +
Sbjct: 110 SFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSS 169

Query: 72  AGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGG 131
            GRA +   + +W+ ++  +  F   F+F+I S +S   ADG+AFF++   S IP+   G
Sbjct: 170 VGRALFYAPVHIWE-SSAVVASFEATFTFLIKSPDSHP-ADGIAFFISNIDSSIPSGSTG 227

Query: 132 GSFGLTKDN 140
              GL  D 
Sbjct: 228 RLLGLFPDA 236

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  101 bits (253), Expect = 4e-23
 Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 19/235 (8%)

Query: 331 DEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK 390
            E+   A P     K++ L   DF   + +G+G FG V     +  +   A+K ++   K
Sbjct: 53  LEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILN---K 109

Query: 391 QGI---KEYA---SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKEN 444
             +    E A    E  ++     + +  L     +   L LV ++   G L + L K  
Sbjct: 110 WEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFE 169

Query: 445 SLLTWEF-RYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV 503
             L  E  R+ +A+ +   +  + +      VHRDIK  NI++D N + ++ DFG    +
Sbjct: 170 DRLPEEMARFYLAE-MVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKL 225

Query: 504 EHAKGSQTTVLAGTMGYMAPE-----CATTGKASKESDVYSFGIVALEIACGRKP 553
                 Q++V  GT  Y++PE         G+   E D +S G+   E+  G  P
Sbjct: 226 MEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  101 bits (253), Expect = 4e-23
 Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 15/234 (6%)

Query: 331 DEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-- 388
            +F + A P     KE+ L  +DF   + +G+G F  V     ++T    A+K +++   
Sbjct: 40  ADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM 99

Query: 389 -SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLL 447
             +  +  +  E  ++     R + QL     ++  L LV E+   G L + L K    +
Sbjct: 100 LKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERI 159

Query: 448 TWEF-RYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA 506
             E  R+ +A+ +   +  +        VHRDIK  NI+LD   + ++ DFG    +   
Sbjct: 160 PAEMARFYLAE-IVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215

Query: 507 KGSQTTVLAGTMGYMAPE-------CATTGKASKESDVYSFGIVALEIACGRKP 553
              ++ V  GT  Y++PE          TG    E D ++ G+ A E+  G+ P
Sbjct: 216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  100 bits (251), Expect = 5e-23
 Identities = 56/221 (25%), Positives = 90/221 (40%), Gaps = 24/221 (10%)

Query: 347 LALATNDFNDD-----QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVK 401
           L +  N   DD     Q LG G  G V + F + T    A+K +    K        EV+
Sbjct: 52  LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR-----REVE 106

Query: 402 IISRL-RHRNLVQLLGWCHE----KKELLLVYEFMPNGSL-DSHLFKENSLLTWEFRYKI 455
           +  R  +  ++V+++         +K LL+V E +  G L      + +   T     +I
Sbjct: 107 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 166

Query: 456 AQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVEHAKGSQTT 512
            + +   + YL       + HRD+K  N++  S   N   K+ DFG A+         T 
Sbjct: 167 MKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 223

Query: 513 VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
               T  Y+APE     K  K  D++S G++   + CG  P
Sbjct: 224 C--YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  101 bits (254), Expect = 5e-23
 Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 26/206 (12%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS------EVKIISRLRHRNLVQ 413
           LG G FG V  G    T   +AVK ++   +Q I+          E++ +   RH ++++
Sbjct: 24  LGVGTFGKVKVGKHELTGHKVAVKILN---RQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80

Query: 414 LLGWCHE----KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
           L    ++      ++ +V E++  G L  ++ K   L   E R    Q + SG+ Y    
Sbjct: 81  L----YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQ-ILSGVDYCHR- 134

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG 529
               VVHRD+K  N++LD++ NAKI DFGL+ ++   +  +T+   G+  Y APE   +G
Sbjct: 135 --HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC--GSPNYAAPE-VISG 189

Query: 530 K--ASKESDVYSFGIVALEIACGRKP 553
           +  A  E D++S G++   + CG  P
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLP 215

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  100 bits (252), Expect = 6e-23
 Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 20/234 (8%)

Query: 331 DEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-- 388
           D F           ++L +   D+   + +G+G FG V     + T    A+K +S+   
Sbjct: 48  DNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM 107

Query: 389 -SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHL----FKE 443
             +     +  E  I++      +VQL     + + L +V E+MP G L + +      E
Sbjct: 108 IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE 167

Query: 444 NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV 503
                   R+  A+ +   L  +        +HRD+K  N++LD + + K+ DFG    +
Sbjct: 168 KWA-----RFYTAE-VVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218

Query: 504 EHAKGSQTTVLAGTMGYMAPE----CATTGKASKESDVYSFGIVALEIACGRKP 553
                 +     GT  Y++PE        G   +E D +S G+   E+  G  P
Sbjct: 219 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 98.2 bits (245), Expect = 2e-22
 Identities = 56/203 (27%), Positives = 84/203 (41%), Gaps = 22/203 (10%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEY-ASEVKIISRLRHRNLVQLLGWC 418
           +G G FG       + T   +AVK + +G    I E    E+     LRH N+V+     
Sbjct: 28  IGSGNFGVARLMRDKLTKELVAVKYIERG--AAIDENVQREIINHRSLRHPNIVRF---- 81

Query: 419 HE----KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCV 474
            E       L ++ E+   G L   +         E R+   Q L SG+ Y        +
Sbjct: 82  KEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQ-LLSGVSYCHS---MQI 137

Query: 475 VHRDIKSSNIMLDSNF--NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-- 530
            HRD+K  N +LD +     KI DFG ++        ++TV  GT  Y+APE     +  
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPE-VLLRQEY 194

Query: 531 ASKESDVYSFGIVALEIACGRKP 553
             K +DV+S G+    +  G  P
Sbjct: 195 DGKIADVWSCGVTLYVMLVGAYP 217

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 96.4 bits (241), Expect = 3e-22
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 13/149 (8%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYA-SEVKIISRLRHRNLVQLL 415
           +K+G+G +G VYK          A+K++      +GI      E+ I+  L+H N+V+L 
Sbjct: 8   EKIGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66

Query: 416 GWCHEKKELLLVYEFMPN---GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
              H KK L+LV+E +       LD     E  L +   +  + Q L +G+ Y  +    
Sbjct: 67  DVIHTKKRLVLVFEHLDQDLKKLLDVC---EGGLESVTAKSFLLQ-LLNGIAYCHDRR-- 120

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLAR 501
            V+HRD+K  N++++     KI DFGLAR
Sbjct: 121 -VLHRDLKPQNLLINREGELKIADFGLAR 148

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 97.3 bits (243), Expect = 3e-22
 Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 27/206 (13%)

Query: 360 LGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS------EVKIISRLRHRNLVQ 413
           LG+G FG V      +T   +A+K +S   +Q +K+         E+  +  LRH ++++
Sbjct: 17  LGEGSFGKVKLATHYKTQQKVALKFIS---RQLLKKSDMHMRVEREISYLKLLRHPHIIK 73

Query: 414 LLGWCHE----KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
           L    ++      ++++V E+   G L  ++ ++  +   E R    Q +   + Y    
Sbjct: 74  L----YDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQ-IICAIEYCHR- 126

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG 529
               +VHRD+K  N++LD N N KI DFGL+ ++      +T+   G+  Y APE    G
Sbjct: 127 --HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VING 181

Query: 530 K--ASKESDVYSFGIVALEIACGRKP 553
           K  A  E DV+S GIV   +  GR P
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLP 207

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 96.8 bits (242), Expect = 4e-22
 Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 17/208 (8%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI---KEYA---SEVKIISR 405
            DF   + LG G FG V+    R    Y A+K +    K+ +   K+      E  ++S 
Sbjct: 6   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLK---KEIVVRLKQVEHTNDERLMLSI 62

Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
           + H  ++++ G   + +++ ++ +++  G L S L K         ++  A+ +   L Y
Sbjct: 63  VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAE-VCLALEY 121

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           L     + +++RD+K  NI+LD N + KI DFG A+ V       T  L GT  Y+APE 
Sbjct: 122 LHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYTLCGTPDYIAPEV 174

Query: 526 ATTGKASKESDVYSFGIVALEIACGRKP 553
            +T   +K  D +SFGI+  E+  G  P
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTP 202

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 97.5 bits (243), Expect = 7e-22
 Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 28/217 (12%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS-EVKIISRLRHRNLV 412
           + D + +G G FG VY+    ++   +A+K+V Q      K + + E++I+ +L H N+V
Sbjct: 56  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 110

Query: 413 QLLGWCHEKKE------LLLVYEFMP---NGSLDSHLFKENSLLTWEFRYKIAQDLASGL 463
           +L  + +   E      L LV +++P         +   + +L     +  + Q L   L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 169

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNA-KIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
            Y+       + HRDIK  N++LD +    K+ DFG A+ +   + + + +   +  Y A
Sbjct: 170 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRA 224

Query: 523 PE---CATTGKASKESDVYSFGIVALEIACGRKPINP 556
           PE    AT    +   DV+S G V  E+    +PI P
Sbjct: 225 PELIFGAT--DYTSSIDVWSAGCVLAEL-LLGQPIFP 258

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 96.6 bits (241), Expect = 8e-22
 Identities = 49/218 (22%), Positives = 101/218 (46%), Gaps = 18/218 (8%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN 410
            + F  ++  GQG FG V  G  + T   +A+K+V Q  +   +E    ++ ++ L H N
Sbjct: 22  MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL-QIMQDLAVLHHPN 80

Query: 411 LVQLLGWCH-----EKKE--LLLVYEFMP---NGSLDSHLFKENSLLTWEFRYKIAQDLA 460
           +VQL  + +     ++++  L +V E++P   +    ++  ++ +      +  + Q L 
Sbjct: 81  IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQ-LI 139

Query: 461 SGLLYLQEEWEQCVVHRDIKSSNIMLD-SNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG 519
             +  L       V HRDIK  N++++ ++   K+ DFG A+ +  ++ +   +   +  
Sbjct: 140 RSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC--SRY 196

Query: 520 YMAPE-CATTGKASKESDVYSFGIVALEIACGRKPINP 556
           Y APE        +   D++S G +  E+    +PI  
Sbjct: 197 YRAPELIFGNQHYTTAVDIWSVGCIFAEM-MLGEPIFR 233

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 95.3 bits (238), Expect = 9e-22
 Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYA-SEVKIISRLRHR 409
             +   +K+G+G +G VYK         +A+KR+   +  +GI   A  E+ ++  L H 
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
           N+V L+   H ++ L LV+EFM    L   L +  + L           L  G+ +  + 
Sbjct: 80  NIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR 501
               ++HRD+K  N++++S+   K+ DFGLAR
Sbjct: 139 R---ILHRDLKPQNLLINSDGALKLADFGLAR 167

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 95.1 bits (237), Expect = 2e-21
 Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 21/215 (9%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQ--GSKQGIKEYASEVKIISRLRH 408
              +     +G G +G V     + +   +A+K++S+   S+   K    E+ ++  ++H
Sbjct: 23  PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH 82

Query: 409 RNLVQLL------GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASG 462
            N++ LL             +  LV  FM     D            + +Y + Q L  G
Sbjct: 83  ENVIGLLDVFTPASSLRNFYDFYLVMPFMQT---DLQKIMGLKFSEEKIQYLVYQML-KG 138

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
           L Y+       VVHRD+K  N+ ++ +   KI DFGLAR  +    ++ T    T  Y A
Sbjct: 139 LKYI---HSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD----AEMTGYVVTRWYRA 191

Query: 523 PE-CATTGKASKESDVYSFGIVALEIACGRKPINP 556
           PE   +    ++  D++S G +  E+    K +  
Sbjct: 192 PEVILSWMHYNQTVDIWSVGCIMAEML-TGKTLFK 225

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 95.1 bits (237), Expect = 2e-21
 Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 22/216 (10%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQ--GSKQGIKEYASEVKIISRLRH 408
              + D Q +G G +G V       T + +A+K++ +   S+   K    E++++  +RH
Sbjct: 24  RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH 83

Query: 409 RNLVQLL------GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWE-FRYKIAQDLAS 461
            N++ LL          +  +  LV  FM     D     ++  L  +  ++ + Q L  
Sbjct: 84  ENVIGLLDVFTPDETLDDFTDFYLVMPFMGT---DLGKLMKHEKLGEDRIQFLVYQML-K 139

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
           GL Y+       ++HRD+K  N+ ++ +   KI DFGLAR  +    S+ T    T  Y 
Sbjct: 140 GLRYI---HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD----SEMTGYVVTRWYR 192

Query: 522 APE-CATTGKASKESDVYSFGIVALEIACGRKPINP 556
           APE      + ++  D++S G +  E+    K +  
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMI-TGKTLFK 227

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 96.0 bits (239), Expect = 3e-21
 Identities = 70/247 (28%), Positives = 105/247 (42%), Gaps = 15/247 (6%)

Query: 313 KRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGF 372
           K++   E D +  S   +   E        P   + +  N+F   + LG+G FG V    
Sbjct: 111 KKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTM--NEFEYLKLLGKGTFGKVILVK 168

Query: 373 FRETNSYIAVKRVSQGSKQGIKEY------ASEVKIISRLRHRNLVQLLGWCHEKKELLL 426
            + T  Y A+K +    K+ I          +E +++   RH  L  L         L  
Sbjct: 169 EKATGRYYAMKILK---KEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225

Query: 427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML 486
           V E+   G L  HL +E        R+  A+ + S L YL  E  + VV+RD+K  N+ML
Sbjct: 226 VMEYANGGELFFHLSRERVFSEDRARFYGAE-IVSALDYLHSE--KNVVYRDLKLENLML 282

Query: 487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALE 546
           D + + KI DFGL +      G+      GT  Y+APE        +  D +  G+V  E
Sbjct: 283 DKDGHIKITDFGLCKE-GIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 341

Query: 547 IACGRKP 553
           + CGR P
Sbjct: 342 MMCGRLP 348

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 93.5 bits (233), Expect = 8e-21
 Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 24/219 (10%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS----EVKIISRL 406
              + +   +G+G +G V   +       +A+K++S    Q    Y      E+KI+ R 
Sbjct: 26  GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ---TYCQRTLREIKILLRF 82

Query: 407 RHRNLVQLL-----GWCHEKKELLLVYEFMPNGSLDSH-LFKENSLLTWEFRYKIAQDLA 460
           RH N++ +          + K++ +V + M     D + L K   L      Y + Q L 
Sbjct: 83  RHENIIGINDIIRAPTIEQMKDVYIVQDLMET---DLYKLLKTQHLSNDHICYFLYQIL- 138

Query: 461 SGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV--EHAKGSQTTVLAGTM 518
            GL Y+       V+HRD+K SN++L++  + KI DFGLAR+   +H      T    T 
Sbjct: 139 RGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195

Query: 519 GYMAPE-CATTGKASKESDVYSFGIVALEIACGRKPINP 556
            Y APE    +   +K  D++S G +  E+    +PI P
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFP 233

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 93.2 bits (232), Expect = 1e-20
 Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 18/214 (8%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQ--GSKQGIKEYASEVKIISRLRH 408
              + + + +G G  G V   +       +A+K++S+   ++   K    E+ ++  + H
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83

Query: 409 RNLVQLL------GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASG 462
           +N++ LL          E +++ +V E M     +     +  L      Y + Q L  G
Sbjct: 84  KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA---NLCQVIQMELDHERMSYLLYQML-CG 139

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
           + +L       ++HRD+K SNI++ S+   KI DFGLAR          T    T  Y A
Sbjct: 140 IKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRA 194

Query: 523 PECATTGKASKESDVYSFGIVALEIACGRKPINP 556
           PE        +  D++S G +  E+      + P
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFP 227

>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Length = 260

 Score = 90.7 bits (224), Expect = 1e-20
 Identities = 37/242 (15%), Positives = 68/242 (28%), Gaps = 26/242 (10%)

Query: 30  PLASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATG 89
                  + Y SF   +         +          A++     +  +Q   +W K   
Sbjct: 25  LPHRRFEYKY-SFKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKTKA 83

Query: 90  NLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPF 149
              ++    +F +  R     ADGLA +             G  FG              
Sbjct: 84  AFENWEVEVTFRVTGRGRI-GADGLAIWYTENQGLD-----GPVFG-------SADMWNG 130

Query: 150 VAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVA 209
           V + FD + N        + +  N+   + N    +D  +         + +  + +   
Sbjct: 131 VGIFFDSFDNDGKKNNPAIVVVGNN--GQINYDHQNDGATQALASCQRDFRNKPYPVRAK 188

Query: 210 FTGFRNNLVVMQGLDYQVDLRQ----------HLPEFVTFGFSMATGVDFAIFSIYSWEF 259
            T ++  L VM    +  D              +P    FG S ATG       + S+  
Sbjct: 189 ITYYQKTLTVMINNGFTPDKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLT 248

Query: 260 NS 261
             
Sbjct: 249 FQ 250

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 93.8 bits (233), Expect = 2e-20
 Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 18/214 (8%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQ--GSKQGIKEYASEVKIISRLRH 408
              + + + +G G  G V   +    +  +A+K++S+   ++   K    E+ ++  + H
Sbjct: 61  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120

Query: 409 RNLVQLL------GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASG 462
           +N++ LL          E +++ LV E M     +     +  L      Y + Q L  G
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDA---NLCQVIQMELDHERMSYLLYQML-CG 176

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
           + +L       ++HRD+K SNI++ S+   KI DFGLAR          T    T  Y A
Sbjct: 177 IKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRA 231

Query: 523 PECATTGKASKESDVYSFGIVALEIACGRKPINP 556
           PE        +  D++S G +  E+    K + P
Sbjct: 232 PEVILGMGYKENVDIWSVGCIMGEMV-RHKILFP 264

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 93.7 bits (233), Expect = 2e-20
 Identities = 43/239 (17%), Positives = 94/239 (39%), Gaps = 26/239 (10%)

Query: 313 KRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQK------LGQGGFG 366
             ++ +       S    +  +R       P   +    +D+    +      +G G +G
Sbjct: 8   AAQQHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYG 67

Query: 367 GVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS----EVKIISRLRHRNLVQLL-----GW 417
            V + + +     +A+K++ +  +  I         E+ I++RL H ++V++L       
Sbjct: 68  HVCEAYDKLEKRVVAIKKILRVFEDLI--DCKRILREIAILNRLNHDHVVKVLDIVIPKD 125

Query: 418 CHEKKELLLVYEFMPNGSLDSH-LFKENSLLTWE-FRYKIAQDLASGLLYLQEEWEQCVV 475
             +  EL +V E       D   LF+    LT    +  +   L  G+ Y+       ++
Sbjct: 126 VEKFDELYVVLEIAD---SDFKKLFRTPVYLTELHIKTLLYNLL-VGVKYVHS---AGIL 178

Query: 476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKE 534
           HRD+K +N +++ + + K+ DFGLAR V++ +   + +                  + +
Sbjct: 179 HRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLK 237

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 92.4 bits (230), Expect = 3e-20
 Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 29/217 (13%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS-EVKIISRLRHRNLV 412
           + + + +G G FG V++    E++  +A+K+V Q      K + + E++I+  ++H N+V
Sbjct: 42  YTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQD-----KRFKNRELQIMRIVKHPNVV 95

Query: 413 QLL------GWCHEKKELLLVYEFMP---NGSLDSHLFKENSLLTWEFRYKIAQDLASGL 463
            L       G   ++  L LV E++P     +   +   + ++     +  + Q L   L
Sbjct: 96  DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQ-LLRSL 154

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNA-KIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
            Y+       + HRDIK  N++LD      K+ DFG A+++   + + + +   +  Y A
Sbjct: 155 AYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYIC--SRYYRA 209

Query: 523 PE---CATTGKASKESDVYSFGIVALEIACGRKPINP 556
           PE    AT    +   D++S G V  E+    +P+ P
Sbjct: 210 PELIFGAT--NYTTNIDIWSTGCVMAEL-MQGQPLFP 243

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 91.2 bits (227), Expect = 3e-20
 Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 29/226 (12%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN 410
            + + D + LG GG G V+     + +  +A+K++     Q +K    E+KII RL H N
Sbjct: 10  GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDN 69

Query: 411 LVQLL--------------GWCHEKKELLLVYEFMPNGSLDSH-LFKENSLLTWEFRYKI 455
           +V++               G   E   + +V E+M     D   + ++  LL    R  +
Sbjct: 70  IVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET---DLANVLEQGPLLEEHARLFM 126

Query: 456 AQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLARLVEHAKGSQTTVL 514
            Q L  GL Y+       V+HRD+K +N+ +++ +   KIGDFGLAR+++    S    L
Sbjct: 127 YQLL-RGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD-PHYSHKGHL 181

Query: 515 AG---TMGYMAPE-CATTGKASKESDVYSFGIVALEIACGRKPINP 556
           +    T  Y +P    +    +K  D+++ G +  E+    K +  
Sbjct: 182 SEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML-TGKTLFA 226

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 90.7 bits (226), Expect = 3e-20
 Identities = 52/203 (25%), Positives = 82/203 (40%), Gaps = 48/203 (23%)

Query: 350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYAS----EVKIIS 404
           AT+ +    ++G G +G VYK     +  ++A+K V   +   G          EV ++ 
Sbjct: 7   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66

Query: 405 RLR---HRNLVQLLGWCHEKKE-----LLLVYEFM-----------PNGSLDSHLFKENS 445
           RL    H N+V+L+  C   +      + LV+E +           P   L +   K   
Sbjct: 67  RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK--- 123

Query: 446 LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH 505
                    + +    GL +L       +VHRD+K  NI++ S    K+ DFGLAR    
Sbjct: 124 --------DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---- 168

Query: 506 AKGSQTT----VLAGTMGYMAPE 524
               Q      V+  T+ Y APE
Sbjct: 169 IYSYQMALTPVVV--TLWYRAPE 189

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 90.8 bits (226), Expect = 6e-20
 Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 31/226 (13%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS----EVKIISRL 406
           ++DF     LG+G +G V     + T   +A+K++    K     +A     E+KI+   
Sbjct: 10  SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP---LFALRTLREIKILKHF 66

Query: 407 RHRNLVQLL-----GWCHEKKELLLVYEFMPNGSLDSH-LFKENSLLTWEFRYKIAQDLA 460
           +H N++ +             E+ ++ E M     D H +     L     +Y I Q L 
Sbjct: 67  KHENIITIFNIQRPDSFENFNEVYIIQELMQT---DLHRVISTQMLSDDHIQYFIYQTL- 122

Query: 461 SGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG---- 516
             +  L       V+HRD+K SN++++SN + K+ DFGLAR+++ +    +         
Sbjct: 123 RAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179

Query: 517 -----TMGYMAPE-CATTGKASKESDVYSFGIVALEIACGRKPINP 556
                T  Y APE   T+ K S+  DV+S G +  E+   R+PI P
Sbjct: 180 VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPIFP 224

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 91.0 bits (226), Expect = 8e-20
 Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 24/186 (12%)

Query: 357 DQKLGQGGFGGVYKGFFRE--TNSYIAVKRVSQGSKQGIKEYAS-EVKIISRLRHRNLVQ 413
             K+G+G +G VYK   ++   +   A+K++      GI   A  E+ ++  L+H N++ 
Sbjct: 26  GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIE---GTGISMSACREIALLRELKHPNVIS 82

Query: 414 LLGWCHEKKE--LLLVYEFMPN---GSLDSHLFKENSLLTWEFRY----KIAQDLASGLL 464
           L        +  + L++++  +     +  H   + +    +        +   +  G+ 
Sbjct: 83  LQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142

Query: 465 YLQEEWEQCVVHRDIKSSNIMLDSNFNA----KIGDFGLARLVEHAKGSQTTVLAG--TM 518
           YL   W   V+HRD+K +NI++          KI D G ARL          +     T 
Sbjct: 143 YLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF 199

Query: 519 GYMAPE 524
            Y APE
Sbjct: 200 WYRAPE 205

>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Length = 253

 Score = 88.4 bits (218), Expect = 9e-20
 Identities = 38/245 (15%), Positives = 66/245 (26%), Gaps = 20/245 (8%)

Query: 41  SFSPQYDDNITYERAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSF 100
           S    Y    +      D      L +          ++   +W+     L D+  H  F
Sbjct: 11  SLIKPYQGVGSSSMPLWDFQGSTILTSQYVRLTPDERSKEGSIWNHQPCFLKDWEMHVHF 70

Query: 101 VIDSRNSSY-YADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVN 159
            +        + DG+A +             G  FG          +   +A+  D Y N
Sbjct: 71  KVHGTGKKNLHGDGIALWYTRD-----RLVPGPVFGSK-------DNFHGLAIFLDTYPN 118

Query: 160 SWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVV 219
                     I +       +     D +          + +  H+  +A    R  L V
Sbjct: 119 DETTERVFPYISVMVNNGSLSYDHSKDGRWTELAGCTADFRNRDHDTFLAVRYSRGRLTV 178

Query: 220 MQGLDYQVDLRQ-------HLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLEMDDETTNP 272
           M  L+ + + +         LP    FG S  TG       I S +    +         
Sbjct: 179 MTDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQLMVEHTPDEEN 238

Query: 273 VSNPK 277
           +   K
Sbjct: 239 IDWTK 243

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 90.5 bits (225), Expect = 1e-19
 Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 22/216 (10%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQ--GSKQGIKEYASEVKIISRLRH 408
              + +   +G G +G V   F  +T   +AVK++S+   S    K    E++++  ++H
Sbjct: 28  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 87

Query: 409 RNLVQLL------GWCHEKKELLLVYEFMPNGSLDSH-LFKENSLLTWEFRYKIAQDLAS 461
            N++ LL          E  ++ LV   M     D + + K   L     ++ I Q L  
Sbjct: 88  ENVIGLLDVFTPARSLEEFNDVYLVTHLMGA---DLNNIVKCQKLTDDHVQFLIYQIL-R 143

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
           GL Y+       ++HRD+K SN+ ++ +   KI DFGLAR        + T    T  Y 
Sbjct: 144 GLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA----DEMTGYVATRWYR 196

Query: 522 APE-CATTGKASKESDVYSFGIVALEIACGRKPINP 556
           APE        ++  D++S G +  E+    + + P
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFP 231

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 89.3 bits (222), Expect = 2e-19
 Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 30/253 (11%)

Query: 318 DEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVY---KGFFR 374
             +   G  + +  + E          +++ +   +F   + LG G +G V+   K    
Sbjct: 22  SADGGDGGEQLLTVKHELRTANLTGHAEKVGI--ENFELLKVLGTGAYGKVFLVRKISGH 79

Query: 375 ETNSYIAVKRVSQGSKQGIKEYASEV-------KIISRLRHRN-LVQLLGWC----HEKK 422
           +T    A+K +    K  I + A          +++  +R    LV L          K 
Sbjct: 80  DTGKLYAMKVLK---KATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL--HYAFQTETK- 133

Query: 423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS 482
            L L+ +++  G L +HL +       E +  + + +   L +L +     +++RDIK  
Sbjct: 134 -LHLILDYINGGELFTHLSQRERFTEHEVQIYVGE-IVLALEHLHK---LGIIYRDIKLE 188

Query: 483 NIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA--SKESDVYSF 540
           NI+LDSN +  + DFGL++     +  +     GT+ YMAP+    G +   K  D +S 
Sbjct: 189 NILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSL 248

Query: 541 GIVALEIACGRKP 553
           G++  E+  G  P
Sbjct: 249 GVLMYELLTGASP 261

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 88.8 bits (221), Expect = 2e-19
 Identities = 67/208 (32%), Positives = 95/208 (45%), Gaps = 14/208 (6%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI---KEYAS---EVKIISR 405
           NDF+  + LG+G FG V     + T  Y A+K +    K+ I    E A    E +++  
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILR---KEVIIAKDEVAHTVTESRVLQN 61

Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
            RH  L  L         L  V E+   G L  HL +E        R+  A+ + S L Y
Sbjct: 62  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE-IVSALEY 120

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           L     + VV+RDIK  N+MLD + + KI DFGL +    + G+      GT  Y+APE 
Sbjct: 121 LHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKTFCGTPEYLAPEV 176

Query: 526 ATTGKASKESDVYSFGIVALEIACGRKP 553
                  +  D +  G+V  E+ CGR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 88.4 bits (220), Expect = 2e-19
 Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 24/214 (11%)

Query: 352 NDFNDDQKLGQGGFGGVY---KGFFRETNSYIAVKRVSQGSKQGIK-----EYASEVKII 403
           + F   + LGQG FG V+   K    +     A+K +    K  +K         E  I+
Sbjct: 24  SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK---KATLKVRDRVRTKMERDIL 80

Query: 404 SRLRHRNLVQLLGWC---HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLA 460
             + H  +V+L  +      K  L L+ +F+  G L + L KE      + ++ +A+ LA
Sbjct: 81  VEVNHPFIVKLH-YAFQTEGK--LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE-LA 136

Query: 461 SGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL-VEHAKGSQTTVLAGTMG 519
             L +L       +++RD+K  NI+LD   + K+ DFGL++  ++H    +     GT+ 
Sbjct: 137 LALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH--EKKAYSFCGTVE 191

Query: 520 YMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
           YMAPE       ++ +D +SFG++  E+  G  P
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 88.0 bits (219), Expect = 4e-19
 Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 24/215 (11%)

Query: 352 NDFNDDQKLGQGGFGGVY---KGFFRETNSYIAVKRVSQGSKQGIKEYASEV-------K 401
             F   + LG+GG+G V+   K     T    A+K +    K  I   A +         
Sbjct: 17  ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK---KAMIVRNAKDTAHTKAERN 73

Query: 402 IISRLRHRNLVQLLGWC---HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
           I+  ++H  +V L+ +      K  L L+ E++  G L   L +E   +     + +A+ 
Sbjct: 74  ILEEVKHPFIVDLI-YAFQTGGK--LYLILEYLSGGELFMQLEREGIFMEDTACFYLAE- 129

Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM 518
           ++  L +L +   + +++RD+K  NIML+   + K+ DFGL +      G+ T    GT+
Sbjct: 130 ISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHTFCGTI 185

Query: 519 GYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
            YMAPE       ++  D +S G +  ++  G  P
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 86.9 bits (216), Expect = 8e-19
 Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 17/209 (8%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HR 409
            +D+   +KLG+G +  V++      N  + VK +    K+ IK    E+KI+  LR   
Sbjct: 35  QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKR---EIKILENLRGGP 91

Query: 410 NLVQLLGWCH--EKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
           N++ L         +   LV+E + N           +L  ++ R+ + + L   L Y  
Sbjct: 92  NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEIL-KALDYCH 147

Query: 468 EEWEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECA 526
                 ++HRD+K  N+M+D  +   ++ D+GLA       G +  V   +  +  PE  
Sbjct: 148 ---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPELL 202

Query: 527 TTGKA-SKESDVYSFGIVALEIACGRKPI 554
              +      D++S G +   +   ++P 
Sbjct: 203 VDYQMYDYSLDMWSLGCMLASMIFRKEPF 231

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 87.4 bits (217), Expect = 1e-18
 Identities = 54/223 (24%), Positives = 85/223 (38%), Gaps = 31/223 (13%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-----------SEVKI 402
           +   + +  G +G V  G        +A+KRV      G                 E+++
Sbjct: 24  YTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82

Query: 403 ISRLRHRNLVQLL-----GWCHEKKELLLVYEFMPNGSLDSH--LFKENSLLTWE-FRYK 454
           ++   H N++ L             +L LV E M     D    +  +  +++ +  +Y 
Sbjct: 83  LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT---DLAQVIHDQRIVISPQHIQYF 139

Query: 455 IAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVL 514
           +   L  GL  L E     VVHRD+   NI+L  N +  I DF LAR  E    +  T  
Sbjct: 140 MYHIL-LGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHY 193

Query: 515 AGTMGYMAPE-CATTGKASKESDVYSFGIVALEIACGRKPINP 556
                Y APE        +K  D++S G V  E+   RK +  
Sbjct: 194 VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKALFR 235

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 86.5 bits (215), Expect = 1e-18
 Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 46/199 (23%)

Query: 352 NDFNDDQKLGQGGFGGVYKGF-FRETNSYIAVKRVSQGS-KQGIKEYA-SEVKIISRLR- 407
             +    ++G+G +G V+K    +    ++A+KRV   + ++G+      EV ++  L  
Sbjct: 11  QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70

Query: 408 --HRNLVQLLGWCH-----EKKELLLVYEFM-----------PNGSLDSHLFKENSLLTW 449
             H N+V+L   C       + +L LV+E +           P   + +   K       
Sbjct: 71  FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK------- 123

Query: 450 EFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS 509
                +   L  GL +L       VVHRD+K  NI++ S+   K+ DFGLAR        
Sbjct: 124 ----DMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR----IYSF 172

Query: 510 QTT----VLAGTMGYMAPE 524
           Q      V+  T+ Y APE
Sbjct: 173 QMALTSVVV--TLWYRAPE 189

>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 113

 Score = 80.3 bits (198), Expect = 2e-18
 Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 11/113 (9%)

Query: 32  ASALTFNYTSFSPQYDDNITYERAYPDSNRVIQL-------PANRETAGRATYNQSMRLW 84
           A +L+F++T F P   +++ ++     +N V+Q+            +AGR  Y+  +RLW
Sbjct: 1   AQSLSFSFTKFDP-NQEDLIFQGHATSTNNVLQVTKLDSAGNPVSSSAGRVLYSAPLRLW 59

Query: 85  DKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLT 137
           +  +  LT F T  +F I +  +S  ADGLAFF+AP  S I     GG  GL 
Sbjct: 60  ED-SAVLTSFDTIINFEISTPYTSRIADGLAFFIAPPDSVISY--HGGFLGLF 109

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 87.1 bits (216), Expect = 2e-18
 Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 48/244 (19%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQ--GSKQGIKEYASEVKIISRLRHRNL 411
           +     +G+G +G VY  + + T   +A+K+V++        K    E+ I++RL+   +
Sbjct: 28  YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 87

Query: 412 VQLL-----GWCHEKKELLLVYEFMPNGSLDSH-LFKENSLLTWE-FRYKIAQDLASGLL 464
           ++L          +  EL +V E   +   D   LFK    LT E  +  +   L  G  
Sbjct: 88  IRLYDLIIPDDLLKFDELYIVLEIADS---DLKKLFKTPIFLTEEHIKTILYNLL-LGEN 143

Query: 465 YLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAG-------- 516
           ++ E     ++HRD+K +N +L+ + + K+ DFGLAR +   K +               
Sbjct: 144 FIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPH 200

Query: 517 -------------TMGYMAPE-CATTGKASKESDVYSFG-IVA---------LEIACGRK 552
                        T  Y APE        +K  D++S G I A         +     R 
Sbjct: 201 NKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRF 260

Query: 553 PINP 556
           P+ P
Sbjct: 261 PLFP 264

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 86.3 bits (214), Expect = 3e-18
 Identities = 56/252 (22%), Positives = 100/252 (39%), Gaps = 60/252 (23%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS-EVKIISRLRHR 409
           +  ++  + LG G FG V + F  E+    A+K+V Q        Y + E+ I+  L H 
Sbjct: 6   SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQ-----DPRYKNRELDIMKVLDHV 60

Query: 410 NLVQLL--------------------------------------GWCHEKKELLLVYEFM 431
           N+++L+                                          + K L ++ E++
Sbjct: 61  NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120

Query: 432 P---NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS 488
           P   +  L S +    S+        I Q L   + ++       + HRDIK  N++++S
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQ-LFRAVGFIHS---LGICHRDIKPQNLLVNS 176

Query: 489 NFNA-KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE---CATTGKASKESDVYSFGIVA 544
             N  K+ DFG A+ +  ++ S   +   +  Y APE    AT  + +   D++S G V 
Sbjct: 177 KDNTLKLCDFGSAKKLIPSEPSVAYIC--SRFYRAPELMLGAT--EYTPSIDLWSIGCVF 232

Query: 545 LEIACGRKPINP 556
            E+    KP+  
Sbjct: 233 GEL-ILGKPLFS 243

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 85.8 bits (212), Expect = 1e-17
 Identities = 61/246 (24%), Positives = 102/246 (41%), Gaps = 16/246 (6%)

Query: 315 KEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFR 374
           K    +  QG     +      +       ++  +   DFN    LG+G FG V     +
Sbjct: 305 KFERAKIGQGTKAPEEKTANTISKFDNNGNRD-RMKLTDFNFLMVLGKGSFGKVMLSERK 363

Query: 375 ETNSYIAVKRVSQGSKQGI---KEYAS---EVKIISR-LRHRNLVQLLGWCHEKKELLLV 427
            T+   AVK +    K  +    +      E ++++   +   L QL         L  V
Sbjct: 364 GTDELYAVKILK---KDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420

Query: 428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD 487
            E++  G L  H+ +          +  A+ +A GL +LQ    + +++RD+K  N+MLD
Sbjct: 421 MEYVNGGDLMYHIQQVGRFKEPHAVFYAAE-IAIGLFFLQS---KGIIYRDLKLDNVMLD 476

Query: 488 SNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI 547
           S  + KI DFG+ +      G  T    GT  Y+APE        K  D ++FG++  E+
Sbjct: 477 SEGHIKIADFGMCKE-NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 535

Query: 548 ACGRKP 553
             G+ P
Sbjct: 536 LAGQAP 541

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 83.0 bits (206), Expect = 2e-17
 Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 15/222 (6%)

Query: 339 PKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI---KE 395
            K  P  ++ L   DF   + LG+G FG V+   F++TN + A+K +    K  +    +
Sbjct: 4   NKERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALK---KDVVLMDDD 60

Query: 396 YAS---EVKIISR-LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEF 451
                 E +++S    H  L  +      K+ L  V E++  G L  H+   +       
Sbjct: 61  VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRA 120

Query: 452 RYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT 511
            +  A+ +  GL +L     + +V+RD+K  NI+LD + + KI DFG+ +       ++T
Sbjct: 121 TFYAAE-IILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKE-NMLGDAKT 175

Query: 512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
               GT  Y+APE     K +   D +SFG++  E+  G+ P
Sbjct: 176 NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 82.1 bits (203), Expect = 2e-17
 Identities = 37/294 (12%), Positives = 76/294 (25%), Gaps = 50/294 (17%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQ 413
               G       ++      +  +A+  V          ++E  S    +SR+    + +
Sbjct: 36  LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVAR 95

Query: 414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC 473
           +L   H +   L+V E++  GSL      + S        +  Q LA+            
Sbjct: 96  VLDVVHTRAGGLVVAEWIRGGSLQEVA--DTSPSPVG-AIRAMQSLAAAADAAHRAG--- 149

Query: 474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASK 533
           V       S + +  + +  +                          M         A+ 
Sbjct: 150 VALSIDHPSRVRVSIDGDVVLAYP---------------------ATMPD-------ANP 181

Query: 534 ESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ 593
           + D+   G     +   R P+     +  ++      D  G       +D  +       
Sbjct: 182 QDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA--ERDTAGQPIEPADIDRDIPFQISA- 238

Query: 594 QIERLMIVGLWCAHPDENLRPS---IRQVIHVLNFEAPLPALPPKMPVPTYLSP 644
                  V       D  +R +   +  +            L P    P   +P
Sbjct: 239 -------VAARSVQGDGGIRSASTLLNLMQQATAVADRTEVLGPIDEAPVSAAP 285

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 82.3 bits (203), Expect = 4e-17
 Identities = 75/375 (20%), Positives = 119/375 (31%), Gaps = 115/375 (30%)

Query: 328 YIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGF-----FRETNSYIAV 382
           Y   ++E       FP   L L        + LG+G FG V +          T   +AV
Sbjct: 12  YDASKWE-------FPRDRLKL-------GKPLGRGAFGQVIEADAFGIDKTATCRTVAV 57

Query: 383 KRVSQGSKQG-IKEYASEVK---------------------------IISRLRHRNLVQL 414
           K + +G+     +   SE+K                           I+   +  NL   
Sbjct: 58  KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 117

Query: 415 L------------------------GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWE 450
           L                        G      +  L        S  S   +E SL   E
Sbjct: 118 LRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVE 177

Query: 451 FRY----------------KIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKI 494
                                +  +A G+ +L     +  +HRD+ + NI+L      KI
Sbjct: 178 EEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKI 234

Query: 495 GDFGLARLVEHAKGSQTTVLAGTMG-----YMAPECATTGKASKESDVYSFGIVALEIAC 549
            DFGLAR +          +          +MAPE       + +SDV+SFG++  EI  
Sbjct: 235 CDFGLARDIYKDP----DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290

Query: 550 -GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHP 608
            G  P  P      V + +        G  + A  P         ++ + M   L C H 
Sbjct: 291 LGASPY-P-----GVKIDEEFCRRLKEGTRMRA--PDYTTP----EMYQTM---LDCWHG 335

Query: 609 DENLRPSIRQVIHVL 623
           + + RP+  +++  L
Sbjct: 336 EPSQRPTFSELVEHL 350

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 81.5 bits (202), Expect = 8e-17
 Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 15/209 (7%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI---KEYAS---EVKIISR 405
           ++F   + LG+G FG V     +ET    AVK +    K  I    +      E +I+S 
Sbjct: 23  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLK---KDVILQDDDVECTMTEKRILSL 79

Query: 406 -LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLL 464
              H  L QL         L  V EF+  G L  H+ K         R+  A+ + S L+
Sbjct: 80  ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAE-IISALM 138

Query: 465 YLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE 524
           +L +   + +++RD+K  N++LD   + K+ DFG+ +      G  T    GT  Y+APE
Sbjct: 139 FLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKE-GICNGVTTATFCGTPDYIAPE 194

Query: 525 CATTGKASKESDVYSFGIVALEIACGRKP 553
                      D ++ G++  E+ CG  P
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 81.6 bits (202), Expect = 9e-17
 Identities = 56/244 (22%), Positives = 107/244 (43%), Gaps = 18/244 (7%)

Query: 318 DEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETN 377
           +          I++E E     +       +L   DF+  + +G+G +  V     ++T+
Sbjct: 19  NLYFQGAMGSGIEEEKEAMNTRESGKASS-SLGLQDFDLLRVIGRGSYAKVLLVRLKKTD 77

Query: 378 SYIAVKRVSQGSKQGI---KEYAS---EVKIISR-LRHRNLVQLLGWCHEKKE-LLLVYE 429
              A++ V    K+ +   ++      E  +  +   H  LV L   C + +  L  V E
Sbjct: 78  RIYAMRVVK---KELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH-SCFQTESRLFFVIE 133

Query: 430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN 489
           ++  G L  H+ ++  L     R+  A+ ++  L YL E   + +++RD+K  N++LDS 
Sbjct: 134 YVNGGDLMFHMQRQRKLPEEHARFYSAE-ISLALNYLHE---RGIIYRDLKLDNVLLDSE 189

Query: 490 FNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC 549
            + K+ D+G+ +      G  T+   GT  Y+APE           D ++ G++  E+  
Sbjct: 190 GHIKLTDYGMCKE-GLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 248

Query: 550 GRKP 553
           GR P
Sbjct: 249 GRSP 252

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 81.2 bits (201), Expect = 1e-16
 Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 19/250 (7%)

Query: 311 GRKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYK 370
           G  + +  E  N   +       +   GP   P        +DF+  + +G+G FG V  
Sbjct: 1   GISQPQEPELMNANPAPPPAPSQQINLGPSSNP----HAKPSDFHFLKVIGKGSFGKVLL 56

Query: 371 GFFRETNSYIAVKRVSQGSKQGI---KEYAS---EVKIISR-LRHRNLVQLLGWCHEKKE 423
              +    + AVK +    K+ I   KE      E  ++ + ++H  LV L        +
Sbjct: 57  ARHKAEEVFYAVKVLQ---KKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK 113

Query: 424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSN 483
           L  V +++  G L  HL +E   L    R+  A+ +AS L YL       +V+RD+K  N
Sbjct: 114 LYFVLDYINGGELFYHLQRERCFLEPRARFYAAE-IASALGYLHS---LNIVYRDLKPEN 169

Query: 484 IMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIV 543
           I+LDS  +  + DFGL +       S T+   GT  Y+APE        +  D +  G V
Sbjct: 170 ILLDSQGHIVLTDFGLCKE-NIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAV 228

Query: 544 ALEIACGRKP 553
             E+  G  P
Sbjct: 229 LYEMLYGLPP 238

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 80.4 bits (199), Expect = 1e-16
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 17/210 (8%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI---KEYAS---EVKIISR 405
            DF+  + +G+G +  V     ++T+   A+K V    K+ +   ++      E  +  +
Sbjct: 9   QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVK---KELVNDDEDIDWVQTEKHVFEQ 65

Query: 406 -LRHRNLVQLLGWCHEKKE-LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGL 463
              H  LV L   C + +  L  V E++  G L  H+ ++  L     R+  A+ ++  L
Sbjct: 66  ASNHPFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE-ISLAL 123

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAP 523
            YL E   + +++RD+K  N++LDS  + K+ D+G+ +      G  T+   GT  Y+AP
Sbjct: 124 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSTFCGTPNYIAP 179

Query: 524 ECATTGKASKESDVYSFGIVALEIACGRKP 553
           E           D ++ G++  E+  GR P
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSP 209

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 80.4 bits (199), Expect = 2e-16
 Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 15/209 (7%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGI---KEYAS---EVKIISR 405
            DFN    LG+G FG V     + T+   AVK +    K  +    +      E ++++ 
Sbjct: 20  TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILK---KDVVIQDDDVECTMVEKRVLAL 76

Query: 406 -LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLL 464
             +   L QL         L  V E++  G L  H+ +          +  A+ +A GL 
Sbjct: 77  PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAE-IAIGLF 135

Query: 465 YLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE 524
           +LQ    + +++RD+K  N+MLDS  + KI DFG+ +      G  T    GT  Y+APE
Sbjct: 136 FLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKTFCGTPDYIAPE 191

Query: 525 CATTGKASKESDVYSFGIVALEIACGRKP 553
                   K  D ++FG++  E+  G+ P
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 79.3 bits (196), Expect = 5e-16
 Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 13/182 (7%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQ--GSKQGIKEYASEVKIISRLR-HRN 410
           +   +KLG+G +G V+K   R T   +AVK++     +    +    E+ I++ L  H N
Sbjct: 11  YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70

Query: 411 LVQLLGWCH--EKKELLLVYEFMPNGSLDSH-LFKENSLLTWEFRYKIAQDLASGLLYLQ 467
           +V LL        +++ LV+++M     D H + + N L     +Y + Q +   + YL 
Sbjct: 71  IVNLLNVLRADNDRDVYLVFDYMET---DLHAVIRANILEPVHKQYVVYQLI-KVIKYLH 126

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT 527
                 ++HRD+K SNI+L++  + K+ DFGL+R   + +     +              
Sbjct: 127 S---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183

Query: 528 TG 529
             
Sbjct: 184 QP 185

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 77.3 bits (191), Expect = 8e-16
 Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 22/171 (12%)

Query: 347 LALATNDFNDD-----QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVK 401
           L +  N   DD     Q LG G  G V + F + T    A+K +        +    EV+
Sbjct: 8   LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARR---EVE 62

Query: 402 IISRL-RHRNLVQLLGWCHE----KKELLLVYEFMPNGSL-DSHLFKENSLLTWEFRYKI 455
           +  R  +  ++V+++         +K LL+V E +  G L      + +   T     +I
Sbjct: 63  LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 122

Query: 456 AQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLV 503
            + +   + YL       + HRD+K  N++  S   N   K+ DFG A+  
Sbjct: 123 MKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 170

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 67.8 bits (166), Expect = 3e-12
 Identities = 44/227 (19%), Positives = 87/227 (38%), Gaps = 52/227 (22%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVK---RVSQGSKQGIKEYASEVKIISRLR------- 407
           +KLG G F  V+       N+++A+K        ++        E+K++ R+        
Sbjct: 25  RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED----EIKLLQRVNDADNTKE 80

Query: 408 ----HRNLVQLLGW--------CHEKKELLLVYEFMPNGSLDSHLF---KENSL--LTWE 450
                 ++++LL           H    +++V+E      L  +L    K+     +   
Sbjct: 81  DSMGANHILKLLDHFNHKGPNGVH----VVMVFE-----VLGENLLALIKKYEHRGIPLI 131

Query: 451 FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD------SNFNAKIGDFGLARLVE 504
           +  +I++ L  GL Y+       ++H DIK  N++++      +    KI D G A   +
Sbjct: 132 YVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD 189

Query: 505 HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
                 T  +  T  Y +PE          +D++S   +  E+  G 
Sbjct: 190 E---HYTNSIQ-TREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 67.2 bits (163), Expect = 3e-12
 Identities = 34/211 (16%), Positives = 63/211 (29%), Gaps = 56/211 (26%)

Query: 338 GPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK------- 390
           GP  F +    L T      +K+G+G FG V++      ++ +A+K ++           
Sbjct: 9   GPVPFSH---CLPTEKLQRCEKIGEGVFGEVFQT--IADHTPVAIKIIAIEGPDLVNGSH 63

Query: 391 -QGIKEYASEVKIISRL---------RHRNLVQLLGWCH--------------------- 419
            +  +E   E+ I   L         R    + L                          
Sbjct: 64  QKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKG 123

Query: 420 ---------EKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
                    +  +L +V EF   G     +  +  L +      I   L + L   +   
Sbjct: 124 SANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK--LSSLATAKSILHQLTASLAVAEASL 181

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR 501
                HRD+   N++L      K+      +
Sbjct: 182 R--FEHRDLHWGNVLLKKTSLKKLHYTLNGK 210

>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B Length = 52

 Score = 59.8 bits (145), Expect = 6e-12
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 223 LDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLEMDDET 269
           L   V L+  +PE+V  GFS  TG ++A   + SW F+S L     +
Sbjct: 6   LSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSELSGTSSS 52

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 64.0 bits (156), Expect = 6e-11
 Identities = 51/259 (19%), Positives = 98/259 (37%), Gaps = 52/259 (20%)

Query: 333 FERGAGPKRFPYKELALATNDFNDDQ-------------------KLGQGGFGGVYKGFF 373
           +  G   K+            ++DDQ                    +G+G FG V K + 
Sbjct: 59  YFLGLNAKKRQGMTGGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYD 118

Query: 374 RETNSYIAVK---RVSQGSKQGIKEYASEVKIISRLRHR------NLVQLLGWCHEKKEL 424
            + + ++A+K      +  +Q  +    E++I+  LR +      N++ +L     +  +
Sbjct: 119 HKVHQHVALKMVRNEKRFHRQAAE----EIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174

Query: 425 LLVYEFMPNGSLDSHLF---KENSL--LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDI 479
            + +E      L  +L+   K+N     +     K A  +   L  L    +  ++H D+
Sbjct: 175 CMTFE-----LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDL 226

Query: 480 KSSNIMLDSNFNA--KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDV 537
           K  NI+L     +  K+ DFG +           T +  +  Y APE     +     D+
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCYEHQ---RVYTYIQ-SRFYRAPEVILGARYGMPIDM 282

Query: 538 YSFGIVALEIACGRKPINP 556
           +S G +  E+  G  P+ P
Sbjct: 283 WSLGCILAELLTG-YPLLP 300

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 62.0 bits (151), Expect = 2e-10
 Identities = 47/215 (21%), Positives = 87/215 (40%), Gaps = 31/215 (14%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVK---RVSQGSKQGIKEYASEVKIISRLRHR----- 409
             +G+G FG V K + R    ++A+K          Q       EV+++  +        
Sbjct: 60  SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI----EVRLLELMNKHDTEMK 115

Query: 410 -NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF---KENSL--LTWEFRYKIAQDLASGL 463
             +V L      +  L LV+E      L  +L+   +  +   ++     K AQ + + L
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFE-----MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNA--KIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
           L+L    E  ++H D+K  NI+L +   +  KI DFG +  +          +  +  Y 
Sbjct: 171 LFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI---YQYIQ-SRFYR 225

Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKPINP 556
           +PE           D++S G + +E+  G +P+  
Sbjct: 226 SPEVLLGMPYDLAIDMWSLGCILVEMHTG-EPLFS 259

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 60.3 bits (145), Expect = 2e-09
 Identities = 61/458 (13%), Positives = 133/458 (29%), Gaps = 132/458 (28%)

Query: 223 LDYQVDLRQH---------LPEFVTFGFSMATGVDFAIFSIYSWEFN--SSLEMDDETTN 271
           +D++    Q+            FV          +F    +     +  S  E+D    +
Sbjct: 7   MDFETGEHQYQYKDILSVFEDAFVD---------NFDCKDVQDMPKSILSKEEIDHIIMS 57

Query: 272 PVSNPKRRRKNRTALVVGLSLGGG-----VLVGGVVLI--IWLAGIGRKRKEGDEEDNQG 324
                     + T  +    L          V  V+ I   +L    +  +       + 
Sbjct: 58  K------DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRM 111

Query: 325 FSEYID------DEFERGAGPKRFPYKELALATNDFNDDQKL---GQGGFGGVYKGFFRE 375
           + E  D        F +    +  PY +L  A  +    + +   G  G G   K     
Sbjct: 112 YIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG---K----- 163

Query: 376 TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL-----LVYEF 430
             +++A+        Q   +   ++  ++          L  C+  + +L     L+Y+ 
Sbjct: 164 --TWVALDVCLSYKVQ--CKMDFKIFWLN----------LKNCNSPETVLEMLQKLLYQI 209

Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC-VVHRDIKSSNIMLDS- 488
            PN +  S       L     + ++ +      L   + +E C +V  +++++    ++ 
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAELRR------LLKSKPYENCLLVLLNVQNAKA-WNAF 262

Query: 489 NFNAKI----GDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVA 544
           N + KI        +   +  A  +  ++   +M     E                 ++ 
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE--------------VKSLLL 308

Query: 545 --LEIACGRKP-----INPKAPQGQVSLL---------QW-VWDLYGNGKL-------LE 580
             L+      P      NP+     +S++          W  W      KL       L 
Sbjct: 309 KYLDCRPQDLPREVLTTNPRR----LSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364

Query: 581 AVDPRLCRD-------F-DGQQIERLMIVGLWCAHPDE 610
            ++P   R        F     I  +++  +W      
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKS 402

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 56.1 bits (135), Expect = 2e-08
 Identities = 50/280 (17%), Positives = 86/280 (30%), Gaps = 98/280 (35%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR--------HR 409
           +KLG G F  V+  +  +   ++A+K V + ++   +    E++++  +R          
Sbjct: 43  RKLGWGHFSTVWLSWDIQGKKFVAMK-VVKSAEHYTETALDEIRLLKSVRNSDPNDPNRE 101

Query: 410 NLVQLLGW--------CHEKKELLLVYEFM-----------PNGSLDSHLFKENSLLTWE 450
            +VQLL           H    + +V+E +               L     K+       
Sbjct: 102 MVVQLLDDFKISGVNGTH----ICMVFEVLGHHLLKWIIKSNYQGLPLPCVKK------- 150

Query: 451 FRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML------------------------ 486
               I Q +  GL YL  +    ++H DIK  NI+L                        
Sbjct: 151 ----IIQQVLQGLDYLHTKCR--IIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPP 204

Query: 487 -------------------------DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
                                          KI D G A  V        T    T  Y 
Sbjct: 205 PSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK----HFTEDIQTRQYR 260

Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQG 561
           + E       +  +D++S   +A E+A G     P + + 
Sbjct: 261 SLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEE 300

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 54.7 bits (132), Expect = 3e-08
 Identities = 43/177 (24%), Positives = 67/177 (37%), Gaps = 20/177 (11%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH-RNLVQLL 415
            +K+G G FG +Y G        +A+K     +K        E KI   ++    +  + 
Sbjct: 14  GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI--ESKIYKMMQGGVGIPTIR 71

Query: 416 GWCHEKKELLLVYEFMPNG-SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW-EQC 473
               E    ++V E +  G SL   LF   S    +F  K    LA  ++   E    + 
Sbjct: 72  WCGAEGDYNVMVMELL--GPSL-EDLFNFCSR---KFSLKTVLLLADQMISRIEYIHSKN 125

Query: 474 VVHRDIKSSNIMLDSNFNAK---IGDFGLARLV------EHAKGSQTTVLAGTMGYM 521
            +HRD+K  N ++          I DFGLA+        +H    +   L GT  Y 
Sbjct: 126 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 182

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 55.1 bits (133), Expect = 3e-08
 Identities = 39/193 (20%), Positives = 66/193 (34%), Gaps = 37/193 (19%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIA---VKRVSQGSKQGIKEY-----ASEVKIISRLRHR 409
           +K+G GGFG +Y  F        A   VK   Q +     E       ++   I +   R
Sbjct: 43  KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIER 102

Query: 410 NLVQLLG-----WC--HEKKELLLVYEFM------PNGSLDSHLFKENSLLTWEFRYKIA 456
             +  LG          E K     Y FM          L   +  +N         ++ 
Sbjct: 103 KQLDYLGIPLFYGSGLTEFKGRS--YRFMVMERLGI--DLQ-KISGQNGTFKKSTVLQLG 157

Query: 457 QDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKI--GDFGLARLV------EHAKG 508
             +   L Y+    E   VH DIK++N++L      ++   D+GL+         +  + 
Sbjct: 158 IRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQE 214

Query: 509 SQTTVLAGTMGYM 521
           +      GT+ + 
Sbjct: 215 NPRKGHNGTIEFT 227

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 53.9 bits (130), Expect = 6e-08
 Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 28/182 (15%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH-RNLVQLL 415
            +++G+G FG +++G     N  +A+K   + S         E +    L     +  + 
Sbjct: 15  GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRD--EYRTYKLLAGCTGIPNVY 72

Query: 416 GWCHEKKELLLVYEFMPNG-SLDSHLFKENSLLTWEFRYK----IAQDLASGLLYLQEEW 470
            +  E    +LV + +  G SL   L         +F  K     A+ + + +  +    
Sbjct: 73  YFGQEGLHNVLVIDLL--GPSL-EDLLDLCGR---KFSVKTVAMAAKQMLARVQSIH--- 123

Query: 471 EQCVVHRDIKSSNIMLDSNFNAK-----IGDFGLARL------VEHAKGSQTTVLAGTMG 519
           E+ +V+RDIK  N ++    +       + DFG+ +        +H    +   L+GT  
Sbjct: 124 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTAR 183

Query: 520 YM 521
           YM
Sbjct: 184 YM 185

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 53.9 bits (130), Expect = 7e-08
 Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 28/182 (15%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH-RNLVQLL 415
            +K+G G FG +  G    TN Y+A+K     S+        E +   +L     + Q+ 
Sbjct: 14  GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL--EYRFYKQLGSGDGIPQVY 71

Query: 416 GWCHEKKELLLVYEFMPNG-SLDSHLFKENSLLTWEFRYK----IAQDLASGLLYLQEEW 470
            +    K   +V E +  G SL   LF         F  K    IA  L S + Y+  + 
Sbjct: 72  YFGPCGKYNAMVLELL--GPSL-EDLFDLCDR---TFSLKTVLMIAIQLISRMEYVHSK- 124

Query: 471 EQCVVHRDIKSSNIML--DSNFNAKIG---DFGLARL------VEHAKGSQTTVLAGTMG 519
              +++RD+K  N ++    N   ++    DF LA+        +H    +   L GT  
Sbjct: 125 --NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTAR 182

Query: 520 YM 521
           YM
Sbjct: 183 YM 184

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 53.9 bits (129), Expect = 9e-08
 Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 20/177 (11%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLG 416
            +K+G G FG +Y G   +TN  +A+K  +  +K     Y  E KI   L+    +  + 
Sbjct: 12  GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLY--ESKIYRILQGGTGIPNVR 69

Query: 417 WC-HEKKELLLVYEFMPNG-SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW-EQC 473
           W   E    +LV + +  G SL   LF   S    +   K    LA  ++   E    + 
Sbjct: 70  WFGVEGDYNVLVMDLL--GPSL-EDLFNFCSR---KLSLKTVLMLADQMINRVEFVHSKS 123

Query: 474 VVHRDIKSSNIMLDSNFNAK---IGDFGLARLV------EHAKGSQTTVLAGTMGYM 521
            +HRDIK  N ++     A    I DFGLA+        +H    +   L GT  Y 
Sbjct: 124 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 180

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 53.2 bits (128), Expect = 1e-07
 Identities = 38/197 (19%), Positives = 70/197 (35%), Gaps = 42/197 (21%)

Query: 358 QKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGSKQGIKEY-----ASEVKIISRLR 407
             +GQGGFG +Y           +++   VK     +     E      A++ + I +  
Sbjct: 41  LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWI 100

Query: 408 HRNLVQLLG-----WCHEKKELLLVYEFM------PNGSLDSHLFKEN----SLLTWEFR 452
               ++ LG           +    Y FM          L   +++ N    S  T    
Sbjct: 101 RTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGS--DLQ-KIYEANAKRFSRKT---V 154

Query: 453 YKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKI--GDFGLA------RLVE 504
            +++  +   L Y+ E      VH DIK+SN++L+     ++   D+GLA       + +
Sbjct: 155 LQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHK 211

Query: 505 HAKGSQTTVLAGTMGYM 521
                      GT+ + 
Sbjct: 212 AYAADPKRCHDGTIEFT 228

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 52.3 bits (126), Expect = 2e-07
 Identities = 30/150 (20%), Positives = 57/150 (38%), Gaps = 35/150 (23%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVK---RVSQGSKQGIKEYASEVKIISRLRHR----- 409
           +K+G G FG V      +   Y AVK    + + ++        E  I+ ++++      
Sbjct: 41  RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKI----EADILKKIQNDDINNN 96

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF---KENSLLTWEFRY-------KIAQDL 459
           N+V+  G       + L++E      L   L+     N+     +             ++
Sbjct: 97  NIVKYHGKFMYYDHMCLIFE-----PLGPSLYEIITRNN-----YNGFHIEDIKLYCIEI 146

Query: 460 ASGLLYLQEEWEQCVVHRDIKSSNIMLDSN 489
              L YL++     + H D+K  NI+LD  
Sbjct: 147 LKALNYLRKM---SLTHTDLKPENILLDDP 173

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 50.1 bits (120), Expect = 1e-06
 Identities = 27/168 (16%), Positives = 58/168 (34%), Gaps = 30/168 (17%)

Query: 358 QKLGQGGFGGVYKGF--------FRETNSYIAVKRVSQGSK----QGIKEYASEVKIISR 405
               +   G +Y+                  ++K  ++  +    Q   + A++   +++
Sbjct: 48  SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNK 107

Query: 406 LRHRNLVQLLG-----WC--HEKKELLLVYEFMPNG-SLDSHLFKENS--LLTWEFRYKI 455
            +      LL          H+ K   LV   +  G SL       +   +L+     ++
Sbjct: 108 WKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL--GRSL-QSALDVSPKHVLSERSVLQV 164

Query: 456 AQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKI--GDFGLAR 501
           A  L   L +L E      VH ++ + NI +D    +++    +G A 
Sbjct: 165 ACRLLDALEFLHE---NEYVHGNVTAENIFVDPEDQSQVTLAGYGFAF 209

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 46.9 bits (112), Expect = 1e-05
 Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 27/168 (16%)

Query: 358 QKLGQGGFGGVYKGF-FRETNSYIAVK---RVSQGSKQGIKEYASEVKIISRLRHR---- 409
             LG+G FG V +        S +A+K    V +  +    E    + ++ +++ +    
Sbjct: 25  GNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLE----INVLKKIKEKDKEN 80

Query: 410 --NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF---KENSL--LTWEFRYKIAQDLASG 462
               V +  W +    + + +E      L  + F   KEN+           +A  L   
Sbjct: 81  KFLCVLMSDWFNFHGHMCIAFE-----LLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 135

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ 510
           L +L E     + H D+K  NI+  ++    + +   +   +  K + 
Sbjct: 136 LRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 180

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 46.9 bits (112), Expect = 1e-05
 Identities = 32/173 (18%), Positives = 59/173 (34%), Gaps = 37/173 (21%)

Query: 358 QKLGQGGFGGVYKGFFRETNS-YIAVK---RVSQGSKQGIKEYASEVKIISRLRHR---- 409
             LG+G FG V +    +    ++AVK    V +  +        E++++  L       
Sbjct: 20  DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS----EIQVLEHLNTTDPNS 75

Query: 410 --NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF---KENSLLTWEFRY-------KIAQ 457
               VQ+L W      + +V+E      L    +   KEN      F         K+A 
Sbjct: 76  TFRCVQMLEWFEHHGHICIVFE-----LLGLSTYDFIKENG-----FLPFRLDHIRKMAY 125

Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ 510
            +   + +L       + H D+K  NI+   +   +  +  + R         
Sbjct: 126 QICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD 175

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	645
3ujo_A	281	Legume lectin; carbohydrate-binding, galactose, ad	100.0
3zyr_A	261	Lectin; sugar binding protein, N-glycan; HET: NAG	100.0
3ipv_A	251	Lectin alpha chain; galactose binding, SEED lectin	100.0
1dbn_A	239	MAL, protein (leukoagglutinin); plant lectin, carb	100.0
1qnw_A	242	Chitin binding lectin, UEA-II; carbohydrate bindin	100.0
1fny_A	237	BARK lectin, BARK agglutinin I,polypeptide A; legu	100.0
1v6i_A	232	Agglutinin, PNA, galactose-binding lectin; open qu	100.0
2eig_A	234	Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin	100.0
1fx5_A	242	UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO	100.0
1sbf_A	253	Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G	100.0
1gzc_A	239	Erythrina crista-galli lectin; carbohydrate, sugar	100.0
1n47_A	233	Isolectin B4; cancer antigen, vicia villosa lectin	100.0
1wbf_A	242	Protein (agglutinin); lectin (agglutinin), legume	100.0
2bqp_A	234	Protein (PEA lectin); D-glucopyranose complex, sug	100.0
1f9k_A	238	Acidic lectin; legume lectin, glycosylated protein	100.0
2fmd_A	240	Lectin, agglutinin, BMA; legume lectin, beta sandw	100.0
1g7y_A	253	Stem/LEAF lectin DB58; jelly roll fold, sugar bind	100.0
1hql_A	257	Lectin; xenograft antigen, sugar BI protein; HET:	100.0
1fat_A	252	Phytohemagglutinin-L; glycoprotein, plant defense	100.0
1gsl_A	243	Griffonia simplicifolia lectin 4; glycoprotein, ma	100.0
1avb_A	226	Arcelin-1; lectin-like glycoprotein, plant defense	100.0
1ioa_A	240	Arcelin-5A, ARC5A; lectin-like proteins, plant def	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1dhk_B	223	Bean lectin-like inhibitor, porcine pancreatic alp	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
2ltn_A	181	PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
1qmo_E	133	Mannose binding lectin, FRIL; crosslink, hematopoi	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
2dur_A	253	VIP36;, vesicular integral-membrane protein VIP36;	100.0
1gv9_A	260	P58/ergic-53; lectin, carbohydrate binding; 1.46A	100.0
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	99.98
1qmo_A	113	Mannose binding lectin, FRIL; crosslink, hematopoi	99.95
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.95
2a6y_A	256	EMP47P (FORM1); beta sandwich, carbohydrate bindin	99.92
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.92
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	99.91
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.87
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.77
2a6z_A	222	EMP47P (FORM2); beta sandwich, carbohydrate bindin	99.71
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.59
2ltn_B	52	PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP	99.36
2a6v_A	226	EMP46P; beta sandwich, carbohydrate binding protei	99.25
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.23
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.05
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.93
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.86
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.46
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.29
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.25
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.2
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.12
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.06
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.98
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.8
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.47
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.46
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.36
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.01
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	96.88
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	96.81
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	96.78
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	96.74
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	96.51
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	96.48
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	96.46
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	96.37
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.45
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	95.23
3mes_A	424	Choline kinase; malaria, structural genomics, stru	93.65
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	88.35
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	84.47
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	83.56

>3ujo_A Legume lectin; carbohydrate-binding, galactose, adenine binding protein; HET: ADE GAL; 2.00A {Dolichos lablab} PDB: 3ujq_A* 3uk9_A* 3ul2_A* 1fat_A* 1g8w_A*

Probab=100.00  E-value=3.4e-64  Score=502.72  Aligned_cols=241  Identities=34%  Similarity=0.576  Sum_probs=204.0

Q ss_pred             HHHHHHHHHHHHhhcCCCCceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CCC------ceEEEEeCCceeccc
Q 042831           14 LLSFFTITISFCLTIIPLASALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NRE------TAGRATYNQSMRLWD   85 (645)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~~------~~G~~~y~~pv~l~~   85 (645)
                      ++++++++++++++.++++.+++|+|++|..   .++.++ ||.+. +|.|+||+ ...      +.|||+|++||+|||
T Consensus         6 ~~~~~~~~fl~l~~~~~sa~~~sF~f~~F~~---~nL~l~GdA~i~-~g~L~LT~~~~~~~p~~~s~Gra~Y~~Pi~l~d   81 (281)
T 3ujo_A            6 FTMKRIVLFLILLTKAASANLISFTFKKFNE---TNLILQRDATVS-SGKLRITKAAENGVPTAGSLGRAFYSTPIQIWD   81 (281)
T ss_dssp             ------------------CEEEEEEESSCCS---TTEEECSSCCCB-TTBEECSCCCSSCCCCSSCEEEEEESSCEECBC
T ss_pred             HHHHHHHHHHHHHcccCcCCcceEEcCCCCc---cCEEEecceEEe-CCEEEeCCCCCCCcccCCceEEEEECCCEEccc
Confidence            3445555666667788889999999999973   479999 99995 99999999 433      899999999999999


Q ss_pred             CCCCCccceeEEEEEEEeeCCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC-CCCC
Q 042831           86 KATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS-WDPT  164 (645)
Q Consensus        86 ~~~~~~~sF~t~F~f~i~~~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~-~d~~  164 (645)
                      +.+|+++||+|+|+|.|.+++...+||||||||+|.++. |. +.||||||+|..++ +.++|+|||||||++|. |||+
T Consensus        82 ~~tg~vaSFsTsFsF~I~~~~~~~~gdGlAF~laP~~~~-p~-~~gg~LGL~n~~~~-~~~n~~vAVEFDT~~N~e~Dp~  158 (281)
T 3ujo_A           82 NTTGTVASWATSFTFNLQAPNAASPADGLAFALVPVGSQ-PK-DKGGFLGLFDSKNY-ASSNQTVAVEFDTFYNGGWDPT  158 (281)
T ss_dssp             SSSCCBEEEEEEEEEECCCSSTTSCCEEEEEEEEETTCC-CC-CCGGGTTTCSCSSC-CTTSCCEEEEECCSCCCSSCCS
T ss_pred             CCCCCceeEEEEEEEEEecCCCCCCCCceEEEEecCCCC-CC-CCcceeeeccccCC-CccCcEEEEEEeccccccCCCC
Confidence            999999999999999999887778899999999999864 54 68999999998766 77899999999999994 9999


Q ss_pred             CCceeeecCCCcccceeeecccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeec
Q 042831          165 FSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMA  244 (645)
Q Consensus       165 ~~hvgidvns~~s~~~~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsas  244 (645)
                      +|||||||||+.|.++++|+  +.+|+.++|||+||+.+++|+|+|++.+.  +..|+|++.|||+++|||+|||||||+
T Consensus       159 ~nHVGIDvNSi~S~~t~~~~--l~~G~~~~vwI~Yd~~tk~L~V~l~~~~~--~~~~~lS~~vDL~~~L~e~v~VGFSAs  234 (281)
T 3ujo_A          159 ERHIGIDVNSIKSIKTTSWD--FANGENAEVLITYDSSTNLLVASLVHPSQ--KTSFIVSERVDLTSVLPEWVSVGFSAT  234 (281)
T ss_dssp             SSEEEEEESSSCCSCEEECC--CCSSCCEEEEEEECTTTCEEEEEEECTTT--CCCEEEEEECCSTTTSCSEEEEEEEEE
T ss_pred             CCeEEEEcCCCCcccccccc--ccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCCceEEEEechHHhccCcEEEEEEee
Confidence            99999999999999999985  67999999999999999999999998764  447899999999999999999999999


Q ss_pred             ccc---eeeeEEEEEeeccCcccc
Q 042831          245 TGV---DFAIFSIYSWEFNSSLEM  265 (645)
Q Consensus       245 tg~---~~~~~~i~~wsf~~~~~~  265 (645)
                      ||.   ..|.|+|++|+|++.+..
T Consensus       235 TG~~~~~~e~H~IlsWSFss~l~~  258 (281)
T 3ujo_A          235 TGLSKGYVETNEVLSWSFASKLSI  258 (281)
T ss_dssp             ECSSTTSCCCCEEEEEEEEEEECS
T ss_pred             cCCCCcccceeEEEEEEEEEEcCC
Confidence            996   589999999999988765

>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} SCOP: b.29.1.1 PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ...

Probab=100.00  E-value=1.1e-63  Score=495.45  Aligned_cols=233  Identities=36%  Similarity=0.654  Sum_probs=209.1

Q ss_pred             hhcCCCCceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CC------CceEEEEeCCceecccCCCCCccceeEE
Q 042831           26 LTIIPLASALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NR------ETAGRATYNQSMRLWDKATGNLTDFTTH   97 (645)
Q Consensus        26 ~~~~~~~~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~------~~~G~~~y~~pv~l~~~~~~~~~sF~t~   97 (645)
                      +++++++.+++|+|++|.++ ..+|.++ ||.+.++|.|+||+ ..      .+.|||+|++||+|||+.+|+++||+|+
T Consensus         3 ~~~~~sa~~~sF~f~~F~~~-~~~l~l~GdA~i~~~g~L~LT~~~~~~~~~~~s~Gra~Y~~Pv~l~d~~tg~vaSFsT~   81 (261)
T 3zyr_A            3 LNRANSTDSLSFSFINFDRD-ERNLIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGRILHSAQVRLWEKSTNRVANLQTQ   81 (261)
T ss_dssp             -----CCEEEEEEESSCCSC-CTTEEEEETCEECTTSCEECSCBCTTSCBCSSEEEEEEESSCEECBCTTTCCBEEEEEE
T ss_pred             ccccCcCcccEEEcCCCCCC-CCCeEEeccEEecCCCeEEeCCCCCCCccccCCEEEEEECCCEEeecCCCCCceeEEEE
Confidence            34677889999999999865 5689999 99997899999999 43      5899999999999999999999999999


Q ss_pred             EEEEEeeCCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCC-CCCCEEEEEEecc---cC-CCCCCCCceeeec
Q 042831           98 FSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN-SSIPFVAVEFDVY---VN-SWDPTFSHVGIDI  172 (645)
Q Consensus        98 F~f~i~~~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~-~~~~~vaVEfDt~---~n-~~d~~~~hvgidv  172 (645)
                      |+|.|.+. ...+||||||||+|.++.+|.+++||||||+|..++++ ..||+|||||||+   +| +|||++|||||||
T Consensus        82 F~F~I~~~-~~~~gdGlAF~lap~~~~~p~~~~g~~LGL~n~~~~g~~~~n~~vAVEFDT~~~~~n~~~Dp~~nHVGIdv  160 (261)
T 3zyr_A           82 FSFFLSSP-LSNPADGIAFFIAPPDTTIPSGSAGGLLGLFNPRTALNESANQVLAVEFDTFFAQNSNTWDPNYQHIGIDV  160 (261)
T ss_dssp             EEEEEECS-SSSCCCEEEEEEECTTCCCCTTCCGGGTTTCCTTTTTCGGGCCCEEEEEECCCCTTTCTTSCSSCEEEEEE
T ss_pred             EEEEEecC-CCCCCccEEEEEccCCCCCCCCCCCceeeeecccccCCCccCcEEEEEEeccccccCcCCCCCCCeEEEEc
Confidence            99999987 56789999999999988778889999999999877644 5689999999999   88 4999999999999


Q ss_pred             CCCcccceeeecccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccceeeeE
Q 042831          173 NSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIF  252 (645)
Q Consensus       173 ns~~s~~~~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~  252 (645)
                      ||+.|.+++.|.  +.+|+.++|||+||+.+++|+|+|++.+.   ..|+|++.|||+++|+|+|||||||+||...|.|
T Consensus       161 Nsi~S~~s~~~~--l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~e~h  235 (261)
T 3zyr_A          161 NSIRSSKVVRWE--RREGKTLNVLVTYNPSTRTIDVVATYPDG---QRYQLSHVVDLTTILPEWVRVGFSAASGEQFQTH  235 (261)
T ss_dssp             SSSSCSEEEECC--CCTTCCEEEEEEEETTTTEEEEEEECTTC---CEEEEEEECCGGGTSCSEEEEEEEEEESSSCCEE
T ss_pred             CCCCcccccccc--ccCCceEEEEEEEcCCCCEEEEEEEcCCC---CCeEEEEEechHHhCcCcEEEEEEecCCCccceE
Confidence            999999999984  67999999999999999999999998663   2789999999999999999999999999999999


Q ss_pred             EEEEeeccCcccc
Q 042831          253 SIYSWEFNSSLEM  265 (645)
Q Consensus       253 ~i~~wsf~~~~~~  265 (645)
                      +|++|+|++.+.+
T Consensus       236 ~IlsWsF~s~l~~  248 (261)
T 3zyr_A          236 NLESWSFTSTLLY  248 (261)
T ss_dssp             EEEEEEEEEEECC
T ss_pred             EEEEEEEEEEcCC
Confidence            9999999988765

>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A*

Probab=100.00  E-value=1.6e-62  Score=485.62  Aligned_cols=225  Identities=38%  Similarity=0.655  Sum_probs=205.2

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CCC------ceEEEEeCCceecccCCCCCccceeEEEEEEEee
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NRE------TAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDS  104 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~~------~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~  104 (645)
                      .+++|+|++|.++ ..+|.++ ||.+.++|.|+||+ ..+      ++|||+|++||+|||+.+|+++||+|+|+|.|.+
T Consensus         2 ~~~sF~f~~F~~~-~~nl~l~GdA~v~~~g~L~LT~~~~~~~~~~~s~Gra~Y~~Pi~l~d~~tg~vaSFsT~F~F~I~~   80 (251)
T 3ipv_A            2 EETSFVFSKFKPL-EPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIWDSATGLVASFATSFRFTIYA   80 (251)
T ss_dssp             EEEEEEESSCCSS-CTTEEEEETCEECTTSCEESSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCC
T ss_pred             cceEEEeCCCCCC-CCCeEEeccEEecCCCeEEcCCCCCCCcccCCcEEEEEECCCEEeecCCCCceeeEEEEEEEEEeC
Confidence            4689999999865 5689999 99997899999999 443      8999999999999999999999999999999998


Q ss_pred             CCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC-C-CCCCCceeeecCCCcccceee
Q 042831          105 RNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS-W-DPTFSHVGIDINSVKSKKNVS  182 (645)
Q Consensus       105 ~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~-~-d~~~~hvgidvns~~s~~~~~  182 (645)
                      ++...+||||||||+|.+.. |. +.||||||+|..++ +..+|+|||||||++|. | ||++|||||||||+.|.+++.
T Consensus        81 ~~~~~~gdGlAF~lap~~~~-~~-~~gg~LGL~n~~~~-~~~n~~vAVEFDT~~n~~~~Dp~~nHVGIdvNsi~S~~t~~  157 (251)
T 3ipv_A           81 PNIATIADGLAFFLAPVASA-PD-SGGGFLGLFDSAVS-GSTYQTVAVEFDTYENTVFTDPPYTHIGFDVNSISSIKTVK  157 (251)
T ss_dssp             SSTTSCCEEEEEEEEETTCC-CC-CCGGGTTTCSSSSC-CTTSCCEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEE
T ss_pred             CCCCCCCCceEEEEecCCCC-CC-CCCceeeeccccCC-CccCcEEEEEEecccccccCCCCCCeEEEEcCCCcccccce
Confidence            87778899999999999865 54 57999999998765 77899999999999995 6 999999999999999999999


Q ss_pred             ecccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccce---eeeEEEEEeec
Q 042831          183 WWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD---FAIFSIYSWEF  259 (645)
Q Consensus       183 ~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~~wsf  259 (645)
                      |+  +.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|++.|||+++|+|+|||||||+||..   .|.|+|++|+|
T Consensus       158 ~~--l~~G~~~~v~I~Yd~~tk~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~e~h~IlsWsF  233 (251)
T 3ipv_A          158 WS--LANGEAAKVLITYNSAVKLLVASLVYPSS--KTSFILADIVDLSSVLPEWVRVGFSAATGASGGKIETHDVFSWSF  233 (251)
T ss_dssp             CC--CCTTCEEEEEEEEETTTTEEEEEEECTTT--CCEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEEE
T ss_pred             eE--ecCCCEEEEEEEEeCCCCEEEEEEecCCC--CccceEEEEechHHhCCCcEEEEEEEecCCCccccceeEEEEEEE
Confidence            84  78999999999999999999999998664  4578999999999999999999999999998   89999999999


Q ss_pred             cCcccc
Q 042831          260 NSSLEM  265 (645)
Q Consensus       260 ~~~~~~  265 (645)
                      ++.+..
T Consensus       234 ~s~l~~  239 (251)
T 3ipv_A          234 ASKLAG  239 (251)
T ss_dssp             EEEECC
T ss_pred             EEECCC
Confidence            988664

>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1

Probab=100.00  E-value=2e-61  Score=477.39  Aligned_cols=224  Identities=36%  Similarity=0.653  Sum_probs=205.8

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C-----CCceEEEEeCCceecccCCCCCccceeEEEEEEEeeC
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N-----RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSR  105 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~-----~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~  105 (645)
                      .+++|+|++|.++ ..+|.++ ||.+.++|.|+||+ .     ..+.|||+|++||+|||+.+|+++||+|+|+|.|.++
T Consensus         2 ~~~~F~f~~F~~~-~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pi~l~~~~tg~vaSFsT~F~F~I~~~   80 (239)
T 1dbn_A            2 DELSFTINNFVPN-EADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNTTGSVASFSTSFTFVVKAP   80 (239)
T ss_dssp             CEEEEEESSCCTT-CTTEEEEETCEECTTSCEESSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCS
T ss_pred             cceEEEcCCCCCC-CCCeEEcccEEecCCCcEEeCCCCCCCcccCceEEEEeCCCEecccCCCCCccceEEEEEEEEeCC
Confidence            4689999999865 5689999 99997789999998 4     4689999999999999999999999999999999988


Q ss_pred             CCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccC---C-CCCCCCceeeecCCCccccee
Q 042831          106 NSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVN---S-WDPTFSHVGIDINSVKSKKNV  181 (645)
Q Consensus       106 ~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n---~-~d~~~~hvgidvns~~s~~~~  181 (645)
                      +...+||||||||+|.++.+|.++.||||||+|..+ ++..+|+|||||||++|   . |||++|||||||||++|++++
T Consensus        81 ~~~~~gdGlAF~l~p~~~~~p~~~~g~~LGl~n~~~-~~~~~~~vAVEFDT~~n~~~~~~Dp~~nHVGIdvNs~~S~~~~  159 (239)
T 1dbn_A           81 NPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSN-SDSSNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTV  159 (239)
T ss_dssp             STTSCCEEEEEEEECTTCCCCSSSCGGGTTSCSSSC-CCTTSCCEEEEEECCCCTTTCTTSCSSCEEEEEESSSSCSEEE
T ss_pred             CCCCCCCCEEEEEecCCCCCCcCCCCCcccccccCC-CCccccEEEEEEeccccCcccccCCCCCcEEEecCCccccceE
Confidence            767789999999999987788889999999998764 46789999999999999   6 999999999999999999999


Q ss_pred             eecccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccce--eeeEEEEEeec
Q 042831          182 SWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD--FAIFSIYSWEF  259 (645)
Q Consensus       182 ~~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~--~~~~~i~~wsf  259 (645)
                      .|+  +.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|++.|||+++|+|+|||||||+||..  .|.|+|++|+|
T Consensus       160 ~~~--l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~h~IlsWsF  235 (239)
T 1dbn_A          160 QWD--WINGGVAFATITYLAPNKTLIASLVYPSN--QTTFSVAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWSF  235 (239)
T ss_dssp             ECC--CCTTCCEEEEEEEEGGGTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSGGGCCCCEEEEEEE
T ss_pred             ccc--ccCCCEEEEEEEEeCCCcEEEEEEccCCC--CCcceEEEEechHHhCCccEEEEEEeccCCCccceeeEEEEEEe
Confidence            984  88999999999999999999999998654  4578999999999999999999999999999  99999999999


Q ss_pred             cCc
Q 042831          260 NSS  262 (645)
Q Consensus       260 ~~~  262 (645)
                      ++.
T Consensus       236 ~s~  238 (239)
T 1dbn_A          236 TST  238 (239)
T ss_dssp             EEE
T ss_pred             Eec
Confidence            865

>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A*

Probab=100.00  E-value=1.2e-60  Score=472.23  Aligned_cols=227  Identities=40%  Similarity=0.734  Sum_probs=207.2

Q ss_pred             CCceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C---CCceEEEEeCCceecccCCCCCccceeEEEEEEEeeC
Q 042831           31 LASALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N---RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSR  105 (645)
Q Consensus        31 ~~~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~---~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~  105 (645)
                      ++.+++|+|++|.++ ..++.++ ||.+.++|.|+||+ .   .++.|||+|++||+|||+.+|+++||+|+|+|.|.++
T Consensus         2 s~~~~~F~f~~F~~~-~~~l~l~G~A~i~~~g~l~LT~~~~~~~~~~Gra~y~~Pv~l~~~~tg~vasFsT~F~F~I~~~   80 (242)
T 1qnw_A            2 LSDDLSFNFDKFVPN-QKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITGKVASFATSFSFVVKAD   80 (242)
T ss_dssp             -CCSEEEEESSCCTT-CTTEEEEETCEECTTSCEESSCCC--CCCEEEEEEESSCEECBCTTTCCBCEEEEEEEEECCBS
T ss_pred             CccceEEEcCCCCCC-CCCeEEccceEEccCCcEEecCCCCcccCCeEEEEeCCCEeeecCCCCCcccEEEEEEEEEecC
Confidence            456789999999965 5689999 99997789999999 4   5689999999999999999999999999999999987


Q ss_pred             CCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecc----cCCCCCCCCceeeecCCCccccee
Q 042831          106 NSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVY----VNSWDPTFSHVGIDINSVKSKKNV  181 (645)
Q Consensus       106 ~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~----~n~~d~~~~hvgidvns~~s~~~~  181 (645)
                       ...+||||||||+|.++.+|.++.||||||+|..+ ++..+|+|||||||+    +|.|||++|||||||||+.|.+++
T Consensus        81 -~~~~gdGlAF~l~p~~~~~p~~~~g~~LGl~n~~~-~~~~~~~vAVEFDT~~~~~~N~~Dp~~nHVGIdvNs~~S~~~~  158 (242)
T 1qnw_A           81 -KSDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSD-SKSSNQIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTV  158 (242)
T ss_dssp             -SSCCCCEEEEEEEETTCCCCTTCCGGGTTTCSSSS-CCTTSCCEEEEEECCCCTTTCTTSCSSCEEEEEESSSSCSEEE
T ss_pred             -CCCCCCCEEEEEecCCCCCCcCCCCCcccccccCC-CCccccEEEEEeecccccccCCCCCCCCcEEEecCCcccccee
Confidence             67789999999999987788889999999998764 577899999999999    998999999999999999999999


Q ss_pred             eecccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccce--eeeEEEEEeec
Q 042831          182 SWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD--FAIFSIYSWEF  259 (645)
Q Consensus       182 ~~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~--~~~~~i~~wsf  259 (645)
                      .|  ++.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|++.+||+++|+|+|||||||+||..  .|.|+|++|+|
T Consensus       159 ~~--~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~h~IlsWsF  234 (242)
T 1qnw_A          159 KW--DWRNGEVADVVITYRAPTKSLTVCLSYPSD--GTSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYF  234 (242)
T ss_dssp             EC--CCCTTCCEEEEEEEEGGGTEEEEEEECTTT--CCEEEEEEECCHHHHSCSEEEEEEEEEESCGGGCBCCEEEEEEE
T ss_pred             cc--cccCCCEEEEEEEEeCCCcEEEEEEecCCC--CcceeEEEeechHHhcCCceEEEEEeccCCCccceEEEEEEEEe
Confidence            98  488999999999999999999999998654  5578999999999999999999999999999  99999999999


Q ss_pred             cCccc
Q 042831          260 NSSLE  264 (645)
Q Consensus       260 ~~~~~  264 (645)
                      ++.+.
T Consensus       235 ~s~l~  239 (242)
T 1qnw_A          235 TSNLE  239 (242)
T ss_dssp             EEEC-
T ss_pred             EeecC
Confidence            88753

>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A*

Probab=100.00  E-value=9.4e-61  Score=471.51  Aligned_cols=222  Identities=39%  Similarity=0.698  Sum_probs=201.0

Q ss_pred             eeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C-----CCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCC
Q 042831           34 ALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N-----RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRN  106 (645)
Q Consensus        34 ~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~-----~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~  106 (645)
                      +++|+|++|.++ ..+|.++ ||.+.++|.|+||+ .     ..+.|||+|++||+|||+.+|+++||+|+|+|.|.++.
T Consensus         3 ~~~F~f~~F~~~-~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pi~l~d~~tg~vaSFsT~F~F~I~~~~   81 (237)
T 1fny_A            3 SLSFSFPKFAPN-QPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTGNVASFVTSFTFIIQAPN   81 (237)
T ss_dssp             EEEEEESSCCTT-CTTEEEEETCEECTTSCEECSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSS
T ss_pred             ceEEEcCCCCCC-CCCeEEcccEEeccCCeEEecCCcCCCcccCceEEEEeCCCEecccCCCCCccceEEEEEEEEeCCC
Confidence            578999999965 5689999 99997789999998 4     46899999999999999999999999999999999887


Q ss_pred             CCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC-CCCCCCceeeecCCCcccceeeecc
Q 042831          107 SSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS-WDPTFSHVGIDINSVKSKKNVSWWS  185 (645)
Q Consensus       107 ~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~-~d~~~~hvgidvns~~s~~~~~~~~  185 (645)
                      ...+||||||||+|.... | ++.||||||+|..+ ++..+|+|||||||++|. |||++|||||||||+.|.++++|  
T Consensus        82 ~~~~gdGlAF~l~p~~~~-~-~~~g~~LGl~n~~~-~~~~~~~vAVEFDT~~n~~~Dp~~nHVGIdvNsi~S~~~~~~--  156 (237)
T 1fny_A           82 PATTADGLAFFLAPVDTQ-P-LDLGGMLGIFKDGY-FNKSNQIVAVEFDTFSNGDWDPKGRHLGINVNSIESIKTVPW--  156 (237)
T ss_dssp             TTSCCEEEEEEEEETTCC-C-CCCGGGTTTCC----CCTTSCCEEEEEECSCCTTTCCSSSEEEEEESSSSCSEEEEC--
T ss_pred             CCCCCCCEEEEeccCCCC-C-CCCCCcccccccCC-CCccccEEEEEeecccCcccCCCCCceEEecCCccccccccc--
Confidence            777899999999998753 4 48899999998764 577899999999999998 99999999999999999999998  


Q ss_pred             cCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccce---eeeEEEEEeeccCc
Q 042831          186 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD---FAIFSIYSWEFNSS  262 (645)
Q Consensus       186 ~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~~wsf~~~  262 (645)
                      ++.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|++.|||+++|+|+|||||||+||..   .|.|+|++|+|++.
T Consensus       157 ~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~~h~IlsWsF~s~  234 (237)
T 1fny_A          157 NWTNGEVANVFISYEASTKSLTASLVYPSL--ETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFESN  234 (237)
T ss_dssp             CCCTTCCEEEEEEEEGGGTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             cccCCCEEEEEEEEeCCCcEEEEEEecCCC--CCcceEEEEechHHhCCCcEEEEEEEeeCCCCcccceeEEEEEEEEEe
Confidence            488999999999999999999999998654  5578999999999999999999999999998   99999999999876


Q ss_pred             c
Q 042831          263 L  263 (645)
Q Consensus       263 ~  263 (645)
                      +
T Consensus       235 l  235 (237)
T 1fny_A          235 L  235 (237)
T ss_dssp             E
T ss_pred             c
Confidence            4

>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ...

Probab=100.00  E-value=8.4e-60  Score=463.23  Aligned_cols=220  Identities=42%  Similarity=0.664  Sum_probs=202.2

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCCC--CCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCC
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPAN--RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSY  109 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~~--~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~  109 (645)
                      .+++|+|++|.++ ..++.++ ||.+.++|.|+||+.  ..+.|||+|++||+|||+.+|+++||+|+|+|.|.+++...
T Consensus         2 ~~~~F~f~~F~~~-~~~l~l~G~A~v~~~g~l~LT~~~~~~~~Gra~y~~Pi~l~~~~tg~vaSFsT~F~F~I~~~~~~~   80 (232)
T 1v6i_A            2 ETVSFNFNSFSEG-NPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYD   80 (232)
T ss_dssp             EEEEEEESSCCTT-CTTEEEEESCEECTTSCEECSCTTSTTCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECCSSSB
T ss_pred             cceEEEcCCCCCC-CCCeEEcccEEEccCCcEEeCCCCCCCceEEEEeCCCEEeecCCCCCccceEEEEEEEEecCCCCC
Confidence            4689999999865 5689999 999977899999984  46899999999999999999999999999999999887677


Q ss_pred             CCCeEEEEEccCCCCCCCCC-CCCcccCccCCCCCCCCCCEEEEEEecccCC--CCCCCCceeeecCCCcccceeeeccc
Q 042831          110 YADGLAFFLAPQGSKIPTNK-GGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS--WDPTFSHVGIDINSVKSKKNVSWWSD  186 (645)
Q Consensus       110 ~g~GlaF~l~p~~~~~~~~~-~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~--~d~~~~hvgidvns~~s~~~~~~~~~  186 (645)
                      +||||||||+|.++.+|.++ .||||||+|.    +..+|+|||||||++|.  |||++|||||||||++|.+++.|+  
T Consensus        81 ~gdGlAF~l~p~~~~~p~~~~~g~~LGl~n~----~~~~~~vAVEFDT~~n~~~~Dp~~nHVGIdvns~~S~~~~~~~--  154 (232)
T 1v6i_A           81 PADGIIFFIAPEDTQIPAGSIGGGTLGVSDT----KGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWN--  154 (232)
T ss_dssp             CCCEEEEEEEETTCCCCTTCCCGGGTTTSCT----TSEEEEEEEEEECSCCGGGTCCSSCEEEEEEEESSCSEEEECC--
T ss_pred             CCCCEEEEEecCCCCCCCCcCCCcccccccC----CCcccEEEEEeecccccccCCCCCCeEEEEcCCcccccccccc--
Confidence            89999999999987788888 9999999985    56789999999999997  999999999999999999999984  


Q ss_pred             CCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccc--eeeeEEEEEeeccCcc
Q 042831          187 VKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV--DFAIFSIYSWEFNSSL  263 (645)
Q Consensus       187 ~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~--~~~~~~i~~wsf~~~~  263 (645)
                      +.+|+.++|||+||+.+++|+|+|++ +  +|..|+|++.|||+++|+|+|||||| +||.  ..|.|+|++|+|++.+
T Consensus       155 l~~G~~~~v~I~Yd~~~~~L~V~l~~-~--~~~~~~ls~~vdL~~~l~e~v~VGFS-sTG~~~~~~~h~IlsWsF~s~l  229 (232)
T 1v6i_A          155 SVSGAVVKVTVIYDSSTKTLSVAVTN-D--NGDITTIAQVVDLKAKLPERVKFGFS-ASGSLGGRQIHLIRSWSFTSTL  229 (232)
T ss_dssp             CCTTCEEEEEEEEETTTTEEEEEEEC-T--TSCEEEEEEECCHHHHSCSEEEEEEE-EECCSSBCCEEEEEEEEEEEEE
T ss_pred             ccCCCEEEEEEEEeCCCcEEEEEEec-C--CCCcceEEEEechHHhCCccEEEEEE-ecCCCccccEEEEEEEEEEeec
Confidence            88999999999999999999999998 4  36689999999999999999999999 9999  6899999999998765

>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus}

Probab=100.00  E-value=1.1e-59  Score=462.41  Aligned_cols=219  Identities=40%  Similarity=0.694  Sum_probs=201.3

Q ss_pred             eeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCCC---CCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCC
Q 042831           35 LTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPAN---RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYY  110 (645)
Q Consensus        35 ~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~~---~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~  110 (645)
                      ++|+|++|. + ..++.++ ||.+.++|.|+||+.   .++.|||+|++||+|||+.+|+++||+|+|+|.|.++....+
T Consensus         1 ~sF~f~~F~-~-~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~Gra~y~~Pv~l~~~~tg~vaSFsT~F~F~I~~~~~~~~   78 (234)
T 2eig_A            1 VSFNYTRFK-D-DGSLIFQGDAKIWTDGRLAMPTDPLVNRTTSHALYATPVPIWDSATGNVASFITSFSFIVSNVQRYPP   78 (234)
T ss_dssp             CEEEESSCC-S-SSSEEEEETCEEEGGGEEESSSCGGGSSEEEEEEESSCEECBCTTTCCBCEEEEEEEEEEEECTTSCC
T ss_pred             CeEEcCCCC-C-CCCeEEcccEEEcCCCCeeeCCCCCccCceEEEEeCCCEEeecCCCCCccceEEEEEEEEeCCCCCCC
Confidence            479999998 2 4589999 999977899999984   468999999999999999999999999999999999877778


Q ss_pred             CCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCC---CceeeecCCCcccceeeecccC
Q 042831          111 ADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTF---SHVGIDINSVKSKKNVSWWSDV  187 (645)
Q Consensus       111 g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~---~hvgidvns~~s~~~~~~~~~~  187 (645)
                      ||||||||+|.++.+|.++.||||||+|..   +..+|+|||||||++|.|||++   |||||||||+.|.+++.|  ++
T Consensus        79 gdGlAF~l~p~~~~~p~~~~g~~LGl~n~~---~~~~~~vAVEFDT~~N~~Dp~~~~~nHVGIdvNsi~S~~~~~~--~l  153 (234)
T 2eig_A           79 TDGVVFFLAPWGTEIPPNSQGGYLGITDSS---NSQNQFVAVEFDSHPNVWDPKSLRSSHIGIDVNSIMSLKAVNW--NR  153 (234)
T ss_dssp             CCEEEEEEEETTCCCCTTCCGGGTTTCCTT---CSCCCCEEEEEECSCCTTSCTTTCSSEEEEEESSSSCSEEEEC--CC
T ss_pred             CCcEEEEEecCCCCCCcCCCCCccccccCC---CccccEEEEEeccccCccCCCCCCCCceEEecCCccccceecc--cc
Confidence            999999999998778888999999999864   5678999999999999999999   999999999999999998  48


Q ss_pred             CCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecc--cceeeeEEEEEeeccCccc
Q 042831          188 KSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMAT--GVDFAIFSIYSWEFNSSLE  264 (645)
Q Consensus       188 ~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsast--g~~~~~~~i~~wsf~~~~~  264 (645)
                      .+|+.++|||+||+.+++|+|+|++ +  +|..|+|++.+||+++|+|+|||||||+|  |.. |.|+|++|+|++.+.
T Consensus       154 ~~g~~~~v~I~Yd~~~~~L~V~l~~-~--~~~~~~ls~~vdL~~~l~e~v~VGFSAsT~~G~~-~~h~IlsWsF~s~l~  228 (234)
T 2eig_A          154 VSGSLEKATIIYDSDTKILTVVMTH-Q--NGQITTISQEIDLKTVLPEKVSVGFSATTWNPER-ERHDIYSWSFTSTLK  228 (234)
T ss_dssp             CTTCCEEEEEEEETTTTEEEEEEEE-T--TSCEEEEEEECCHHHHSCSEEEEEEEEEECSSCC-EEEEEEEEEEEEECC
T ss_pred             cCCCEEEEEEEEeCCCcEEEEEEec-C--CCCcceEeEeechHHhcCCceEEEEEeeecCCCc-ceeEEEEEEEEecCC
Confidence            8999999999999999999999998 4  36678999999999999999999999999  998 999999999988764

>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A*

Probab=100.00  E-value=1.6e-59  Score=464.08  Aligned_cols=223  Identities=35%  Similarity=0.636  Sum_probs=202.2

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C---CCceEE-EEeCCceecccCCCCCccceeEEEEEEEeeC-
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N---RETAGR-ATYNQSMRLWDKATGNLTDFTTHFSFVIDSR-  105 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~---~~~~G~-~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~-  105 (645)
                      .+++|+|++|.++ ..+|.++ ||.+.++|.|+||+ .   ..+.|| |+|++||+|||+.+|+++||+|+|+|.|.++ 
T Consensus         2 ~~~~F~f~~F~~~-~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~Gr~a~y~~Pv~l~~~~tg~vaSFsT~F~F~I~~~~   80 (242)
T 1fx5_A            2 DDLSFKFKNFSQN-GKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNCNTGELASFITSFSFFMETSA   80 (242)
T ss_dssp             CEEEEEESSCCTT-CSSEEEEETCEECTTSCEESCCCSSSSCSEEEEEEEESSCEECEETTTTEECEEEEEEEEEEEESS
T ss_pred             cceEEEcCCCCCC-CCCeEEcccEEeccCCcEEecCCCCcccCCccCEEEeCCCEEeecCCCCCccceEEEEEEEEecCC
Confidence            4689999999865 5689999 99997789999999 4   468999 9999999999999999999999999999987 


Q ss_pred             CCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC---CCCCCCceeeecCCCcccceee
Q 042831          106 NSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS---WDPTFSHVGIDINSVKSKKNVS  182 (645)
Q Consensus       106 ~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~---~d~~~~hvgidvns~~s~~~~~  182 (645)
                      ....+||||||||+|.... | ++.||||||+|..+ ++..+|+|||||||++|.   |||++|||||||||+.|.+++.
T Consensus        81 ~~~~~gdGlAF~l~p~~~~-~-~~~g~~LGl~n~~~-~~~~n~~vAVEFDT~~N~~~~~Dp~~nHVGIdvNs~~S~~~~~  157 (242)
T 1fx5_A           81 NPKAATDGLTFFLAPPDSP-L-RRAGGYFGLFNDTK-CDSSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAER  157 (242)
T ss_dssp             CGGGCCCEEEEEEECTTCC-C-CBCGGGTTTBSSSC-CCGGGCCEEEEEECCCTTTSTTSCSSCEEEEEESSSSCSEEEE
T ss_pred             CCCCCCCcEEEEEecCCCC-C-CCCCCcccccccCC-CCccCcEEEEEeccccCcccccCCCCCeEEEecCCccccceec
Confidence            5667899999999998753 4 47899999999764 577899999999999997   8999999999999999999999


Q ss_pred             ecccCCCC--ceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecc--cceeeeEEEEEee
Q 042831          183 WWSDVKSG--RRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMAT--GVDFAIFSIYSWE  258 (645)
Q Consensus       183 ~~~~~~~g--~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsast--g~~~~~~~i~~ws  258 (645)
                      |  ++.+|  +.++|||+||+.+++|+|+|.+.+.  |..|+|++.+||+++|+|+|||||||+|  |.. |.|+|++|+
T Consensus       158 ~--~l~~G~~~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsT~~G~~-~~h~IlsWs  232 (242)
T 1fx5_A          158 W--NKRYGLNNVANVEIIYEASSKTLTASLTYPSD--QTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQ-ATHEVLNWY  232 (242)
T ss_dssp             C--CCCCSGGGCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCGGGTSCSEEEEEEEEEEETTSC-EEEEEEEEE
T ss_pred             c--cccCCCceeEEEEEEEeCCCCEEEEEEecCCC--CccceeeEEechHHhCCccEEEEEEecccCCCc-ceeEEEEEE
Confidence            8  47899  9999999999999999999998654  5578999999999999999999999999  999 999999999


Q ss_pred             ccCccc
Q 042831          259 FNSSLE  264 (645)
Q Consensus       259 f~~~~~  264 (645)
                      |++.+.
T Consensus       233 F~s~l~  238 (242)
T 1fx5_A          233 FTSTFI  238 (242)
T ss_dssp             EEEESS
T ss_pred             eEeecc
Confidence            988754

>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A*

Probab=100.00  E-value=2.2e-59  Score=465.65  Aligned_cols=223  Identities=37%  Similarity=0.650  Sum_probs=203.0

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C------CCceEEEEeCCceecccCCCCCccceeEEEEEEEee
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N------RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDS  104 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~------~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~  104 (645)
                      .+++|+|++|.++ ..++.++ ||.+.++|.|+||+ .      .++.|||+|++||+|||+.+|+++||+|+|+|.|.+
T Consensus         2 ~~~~F~f~~F~~~-~~~l~l~GdA~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~   80 (253)
T 1sbf_A            2 ETVSFSWNKFVPK-QPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYA   80 (253)
T ss_dssp             EEEEEEESSCCTT-CTTEEEEETCEECTTSCEECSCBCTTSCBCTTCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEEC
T ss_pred             cceEEEcCCCCCC-CCCeEEcccEEEcCCCeEEeCCCccCCcccCCCeEEEEECCCEecccCCCCcccceEEEEEEEEeC
Confidence            4689999999865 5689999 99997789999999 4      358999999999999999999999999999999998


Q ss_pred             CCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCcccceeeec
Q 042831          105 RNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWW  184 (645)
Q Consensus       105 ~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~s~~~~~~~  184 (645)
                      ++...+||||||||+|.... | ++.||||||+|..   +..+|+|||||||++|.|||++|||||||||+.|.++..|+
T Consensus        81 ~~~~~~gdGlAF~l~p~~~~-~-~~~g~~LGL~n~~---~~~n~~vAVEFDT~~N~~Dp~~nHVGIdvNs~~S~~t~~~~  155 (253)
T 1sbf_A           81 PDTKRLADGLAFFLAPIDTK-P-QTHAGYLGLFNEN---ESGDQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSWD  155 (253)
T ss_dssp             SSTTSCCEEEEEEEEETTCC-C-CCCGGGTTTCCTT---SCCCSCEEEEEECSCCTTCCSSSEEEEEESSSSCSEEEECC
T ss_pred             CCCCCCCCcEEEEEecCCCC-C-CCCCCccccccCC---CcccceEEEEeccccCCCCCCCCcEEEEcCCccccceeccc
Confidence            87677899999999998753 4 5889999999864   66889999999999999999999999999999999999984


Q ss_pred             ccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccce--eeeEEEEEeeccCc
Q 042831          185 SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD--FAIFSIYSWEFNSS  262 (645)
Q Consensus       185 ~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~--~~~~~i~~wsf~~~  262 (645)
                        +.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|++.+||+++|||+|||||||+||..  .+.|+|++|+|++.
T Consensus       156 --l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~H~IlsWsF~s~  231 (253)
T 1sbf_A          156 --LANNKVAKVLITYDASTSLLVASLVYPSQ--RTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASN  231 (253)
T ss_dssp             --CCTTCCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSSSCCCEEEEEEEEEEEE
T ss_pred             --ccCCCeeEEEEEEeCCCcEEEEEEecCCC--CCcceEEEEechHHhCCCceEEEEEeccCCCccceeeEEEEEEeEee
Confidence              88999999999999999999999998654  5578999999999999999999999999999  99999999999887


Q ss_pred             ccc
Q 042831          263 LEM  265 (645)
Q Consensus       263 ~~~  265 (645)
                      +..
T Consensus       232 l~~  234 (253)
T 1sbf_A          232 LPH  234 (253)
T ss_dssp             ECC
T ss_pred             cCC
Confidence            643

>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A*

Probab=100.00  E-value=1.3e-59  Score=464.42  Aligned_cols=223  Identities=35%  Similarity=0.671  Sum_probs=201.0

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C------CCceEEEEeCCceecccCCCCCccceeEEEEEEEee
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N------RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDS  104 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~------~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~  104 (645)
                      .+++|+|++|.++ ..++.++ ||.+.++|.|+||+ .      ..+.|||+|++||+|||+.+|+++||+|+|+|.|.+
T Consensus         2 ~~~~F~f~~F~~~-~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pi~l~~~~tg~vaSFsT~F~F~I~~   80 (239)
T 1gzc_A            2 ETISFSFSEFEPG-NDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFSIEQ   80 (239)
T ss_dssp             EEEEEEESSCCTT-CTTEEEEETCEECTTSCEESSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCC
T ss_pred             eeEEEEeCCCCCC-CCCeEEcccEEEcCCCcEEeCCCCcCCcccCCceEEEEeCCCEecccCCCCCccceEEEEEEEEeC
Confidence            3678999999965 5689999 99997789999999 4      358999999999999999999999999999999998


Q ss_pred             CC-CCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCC-CCCCceeeecCCCcccceee
Q 042831          105 RN-SSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWD-PTFSHVGIDINSVKSKKNVS  182 (645)
Q Consensus       105 ~~-~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d-~~~~hvgidvns~~s~~~~~  182 (645)
                      +. ...+||||||||+|.... | ++.||||||+|..+ ++..+|+|||||||++|.|| |++|||||||||+.|.+++.
T Consensus        81 ~~~~~~~gdGlAF~l~p~~~~-~-~~~g~~LGl~n~~~-~~~~~~~vAVEFDT~~n~~dDp~~nHVGIdvns~~S~~~~~  157 (239)
T 1gzc_A           81 PYTRPLPADGLVFFMGPTKSK-P-AQGYGYLGVFNNSK-QDNSYQTLAVEFDTFSNPWDPPQVPHIGIDVNSIRSIKTQP  157 (239)
T ss_dssp             CCSSSCCCEEEEEEEECSSCC-C-CCCGGGTTTCSSSS-CCGGGCCEEEEEECSCCTTSCSSSSEEEEEESSSSCSEEEE
T ss_pred             CCCCCCCCCcEEEEEecCCCC-C-CCCCCcccccccCC-CCccccEEEEEEecccccCCCCCCCeEEEecCCcccccccc
Confidence            76 677899999999998753 4 48899999998764 57789999999999999865 99999999999999999999


Q ss_pred             ecccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccc---eeeeEEEEEeec
Q 042831          183 WWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV---DFAIFSIYSWEF  259 (645)
Q Consensus       183 ~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~---~~~~~~i~~wsf  259 (645)
                      |  ++.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|++.+||+++|+|+|||||||+||.   ..|.|+|++|+|
T Consensus       158 ~--~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~~h~IlsWsF  233 (239)
T 1gzc_A          158 F--QLDNGQVANVVIKYDAPSKILHVVLVYPSS--GAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSF  233 (239)
T ss_dssp             C--CCCTTCEEEEEEEEETTTTEEEEEEECTTT--CCEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEEE
T ss_pred             c--cccCCCEEEEEEEEeCCCcEEEEEEecCCC--CccceEEEEechHHhCCCceEEEEEeccCCCccccceEEEEEEEe
Confidence            8  488999999999999999999999998654  457899999999999999999999999997   489999999999


Q ss_pred             cCcc
Q 042831          260 NSSL  263 (645)
Q Consensus       260 ~~~~  263 (645)
                      ++.+
T Consensus       234 ~s~l  237 (239)
T 1gzc_A          234 QASL  237 (239)
T ss_dssp             EEEE
T ss_pred             EEec
Confidence            8764

>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1

Probab=100.00  E-value=8.7e-59  Score=457.40  Aligned_cols=221  Identities=38%  Similarity=0.690  Sum_probs=200.4

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C-----CCceEEEEeCCceecccCCCCCccceeEEEEEEEeeC
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N-----RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSR  105 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~-----~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~  105 (645)
                      .+++|+|++|.++ ..++.++ ||.+.++|.|+||+ .     .++.|||+|++||+|||+.+  ++||+|+|+|.|.++
T Consensus         2 ~~~~F~f~~F~~~-~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pi~l~d~~~--~~sFsT~F~F~I~~~   78 (233)
T 1n47_A            2 ESTSFSFTNFNPN-QNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDNTT--LASFTTSFSFVMAAP   78 (233)
T ss_dssp             EEEEEEESSCCTT-CTTEEEEETCEECTTSCEESSCBSSSSBCTTCEEEEEESSCEECBCSSC--BCEEEEEEEEECCCS
T ss_pred             cceEEEcCCCCCC-CCCeEEccceEEccCCcEEeccCcCCCccCCCeEEEEECCCEeccCCCC--cCCEEEEEEEEEeCC
Confidence            4689999999965 5689999 99997789999999 4     36899999999999999877  999999999999988


Q ss_pred             CCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCcccceeeecc
Q 042831          106 NSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWS  185 (645)
Q Consensus       106 ~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~s~~~~~~~~  185 (645)
                      +...+||||||||+|.... |. +.||||||++..+ ++..+|+|||||||++|.|||++|||||||||+.|.++..|  
T Consensus        79 ~~~~~gdGlAF~l~p~~~~-p~-~~g~~LGl~n~~~-~~~~n~~vAVEFDT~~N~~Dp~~nHvGIdvns~~S~~~~~~--  153 (233)
T 1n47_A           79 AAAAVADGLAFFLAPPDTQ-PQ-ARGGFLGLFADRA-HDASYQTVAVEFDTYSNAWDPNYTHIGIDTNGIESKKTTPF--  153 (233)
T ss_dssp             STTSCCEEEEEEEECTTCC-CC-CCGGGTTTCSSSS-CCGGGCCEEEEEECSCCTTSCSSCEEEEEESSSSCSEEEEC--
T ss_pred             CCCCCCCcEEEEEecCCCC-CC-CCCCcccccccCC-CCccCceEEEEeccccCCCCCCCCcEEEccCCccccccccc--
Confidence            7677899999999999865 65 8899999999764 57789999999999999999999999999999999999988  


Q ss_pred             cCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccce---eeeEEEEEeeccCc
Q 042831          186 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD---FAIFSIYSWEFNSS  262 (645)
Q Consensus       186 ~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~~wsf~~~  262 (645)
                      ++.+|+.++|||+||+.+++|+|+|.+.+..  ..|+|++.+||+++|||+|||||||+||..   .|.|+|++|+|++.
T Consensus       154 ~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~~--~~~~ls~~vdL~~~l~~~~~vGFSAsTG~~~~~~~~h~IlsWsF~s~  231 (233)
T 1n47_A          154 DMVYGEKANIVITYQASTKALAASLVFPVSQ--TSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWSFAVS  231 (233)
T ss_dssp             CCCTTSCEEEEEEEETTTTEEEEEEEETTTT--EEEEEEEECCGGGTSCSEEEEEEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             cccCCCEEEEEEEEeCCCCEEEEEEecCCCC--CcceEEEEechHHhCCCceEEEEEeccCCCccccceeEEEEEEEEee
Confidence            4779999999999999999999999986543  478999999999999999999999999998   99999999999875


Q ss_pred             c
Q 042831          263 L  263 (645)
Q Consensus       263 ~  263 (645)
                      +
T Consensus       232 l  232 (233)
T 1n47_A          232 L  232 (233)
T ss_dssp             E
T ss_pred             c
Confidence            3

>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A*

Probab=100.00  E-value=8.5e-59  Score=459.00  Aligned_cols=221  Identities=39%  Similarity=0.678  Sum_probs=200.6

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C-----CCceEEEEeCCceecccCCCCCccceeEEEEEEEeeC
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N-----RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSR  105 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~-----~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~  105 (645)
                      .+++|+|++|.++ ..+|.++ ||.+.++|.|+||+ .     ..+.|||+|++||+|||+.+|+++||+|+|+|.|.++
T Consensus         2 ~~~~F~f~~F~~~-~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~   80 (242)
T 1wbf_A            2 KTISFNFNQFHQN-EEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNVASFETRFSFSIRQP   80 (242)
T ss_dssp             CEEEEEESSCCTT-CTTEEEEETCEECTTSCEESSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCS
T ss_pred             cceEEEcCCCCCC-CCCeEEccceEEccCCcEEecCcccCCcccCCeEEEEECCCEecccCCCCCeeeEEEEEEEEEeCC
Confidence            3678999999865 5689999 99997789999999 4     4689999999999999999999999999999999987


Q ss_pred             -CCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCcccceeeec
Q 042831          106 -NSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWW  184 (645)
Q Consensus       106 -~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~s~~~~~~~  184 (645)
                       ....+||||||||+|....  .++.||||||+|..    ..+|+|||||||++|.|||++|||||||||+.|.++..| 
T Consensus        81 ~~~~~~gdGlAF~l~p~~~~--~~~~g~~LGl~n~~----~~~~~vAVEFDT~~N~~Dp~~nHVGIdvNs~~S~~~~~~-  153 (242)
T 1wbf_A           81 FPRPHPADGLVFFIAPPNTQ--TGEGGGYFGIYNPL----SPYPFVAVEFDTFRNTWDPQIPHIGIDVNSVISTKTVPF-  153 (242)
T ss_dssp             CCSSCCCEEEEEEEECSSCC--CCCCGGGTTTCCTT----SCCCCEEEEEECSCCTTCCSSSEEEEEESSSSCSEEEEC-
T ss_pred             CCCCCCCCcEEEEEecCCCC--CCCCCCccccccCC----CcCcEEEEEeccccCCCCCCCCeEEEECCCccccceeee-
Confidence             5677899999999998753  44789999999864    578999999999999999999999999999999999988 


Q ss_pred             ccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecc----cce---eeeEEEEEe
Q 042831          185 SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMAT----GVD---FAIFSIYSW  257 (645)
Q Consensus       185 ~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsast----g~~---~~~~~i~~w  257 (645)
                       ++.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|++.|||+++|+|+|||||||+|    |..   .|.|+|++|
T Consensus       154 -~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTg~~~G~~~~~~~~h~IlsW  230 (242)
T 1wbf_A          154 -TLDNGGIANVVIKYDASTKILHVVLVFPSL--GTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSW  230 (242)
T ss_dssp             -CCCTTSCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECCGGGCCTTCCCCCEEEEE
T ss_pred             -EecCCCEEEEEEEEeCCCCEEEEEEccCCC--CCcceEEEEechHHhcCCceEEEEEEeecCcCCccccccceEEEEEE
Confidence             488999999999999999999999998654  4578999999999999999999999999    988   899999999


Q ss_pred             eccCccc
Q 042831          258 EFNSSLE  264 (645)
Q Consensus       258 sf~~~~~  264 (645)
                      +|++.+.
T Consensus       231 sF~s~l~  237 (242)
T 1wbf_A          231 SFSASLP  237 (242)
T ss_dssp             EEEEECC
T ss_pred             EeEecCC
Confidence            9988754

>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1

Probab=100.00  E-value=2.1e-58  Score=456.03  Aligned_cols=224  Identities=38%  Similarity=0.737  Sum_probs=203.0

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCC
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYY  110 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~  110 (645)
                      .+++|+|++|.++ ..++.++ ||. .++|.|+||+ ..++.|||+|++||+|||+.+|+++||+|+|+|.|.++....+
T Consensus         2 ~~~~F~f~~F~~~-~~~l~l~G~A~-~~~g~l~LT~~~~~~~G~a~y~~Pv~l~~~~~~~~~sFst~F~F~I~~~~~~~~   79 (234)
T 2bqp_A            2 ETTSFLITKFSPD-QQNLIFQGDGY-TTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANFVTSFTFVINAPNSYNV   79 (234)
T ss_dssp             EEEEEEESSBCTT-CTTEEEEETCE-EETBEEEEECSCTTCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECSSTTSC
T ss_pred             cceEEEcCCCCCC-CCCEEEeecee-cCCCEEEeCCCCCCCEEEEEECCCEEcccCCCCceeeEEEEEEEEEeCCCCCCC
Confidence            4689999999865 5689999 999 5889999999 6679999999999999999999999999999999998876778


Q ss_pred             CCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC-CCCC--CCceeeecCCCcccceeeecccC
Q 042831          111 ADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS-WDPT--FSHVGIDINSVKSKKNVSWWSDV  187 (645)
Q Consensus       111 g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~-~d~~--~~hvgidvns~~s~~~~~~~~~~  187 (645)
                      ||||||||+|.... |. +.||||||++..+ ++..+|+|||||||++|. |||+  +|||||||||+.|.++..|  ++
T Consensus        80 gdGlAF~l~p~~~~-p~-~~g~~LGl~n~~~-~~~~~~~vAVEFDT~~N~~~Dp~~~~nHVgIdvns~~S~~s~~~--~l  154 (234)
T 2bqp_A           80 ADGFTFFIAPVDTK-PQ-TGGGYLGVFNSAE-YDKTTQTVAVEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKSW--KL  154 (234)
T ss_dssp             CCEEEEEEEETTCC-CC-CCGGGTTTCSCSS-CCGGGCCEEEEEECSCCTTTSCTTCCCEEEEEESSSSCSEEEEC--CC
T ss_pred             CCcEEEEEecCCCC-CC-CCCCccccccccC-CCCCCcEEEEEEecccCcccCCCCCCCceeEeeCCccccceEee--EE
Confidence            99999999999865 65 8899999998764 567899999999999997 8999  9999999999999999998  47


Q ss_pred             CCCceeEEEEEEcCCCceEEEEEecCCCc---ccccceeeEeeccCcCCCCceEEEEeecccceeeeEEEEEeeccCcc
Q 042831          188 KSGRRNEAWISYNSSTHNLSVAFTGFRNN---LVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSL  263 (645)
Q Consensus       188 ~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~---~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~wsf~~~~  263 (645)
                      .+|+.++|||+||+.+++|+|+|.+.+..   +|..|+|++.+||+.+|||+|||||||+||...+.|+|++|+|++.+
T Consensus       155 ~~g~~~~v~I~Yd~~~~~L~V~l~~~~~~~~~~p~~~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~H~IlsWsF~s~l  233 (234)
T 2bqp_A          155 QNGEEANVVIAFNAATNVLTVSLTYPNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSEL  233 (234)
T ss_dssp             CTTCEEEEEEEEETTTTEEEEEEEECC------CEEEEEEEECCGGGTSCSEEEEEEEEECSSSCCEEEEEEEEEEEEE
T ss_pred             cCCCEEEEEEEEeCCCCEEEEEEecCCCCcccCCCcceEEEEechHHhCCCceEEEEEeccCCCcccEEEEEEEEEeec
Confidence            79999999999999999999999987665   67789999999999999999999999999999999999999998753

>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A*

Probab=100.00  E-value=2.2e-58  Score=455.95  Aligned_cols=220  Identities=35%  Similarity=0.634  Sum_probs=199.6

Q ss_pred             eeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C------CCceEEEEeCCceecccCCCCCccceeEEEEEEEeeC
Q 042831           34 ALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N------RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSR  105 (645)
Q Consensus        34 ~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~------~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~  105 (645)
                      +++|+|++|.++ ..++.++ ||.+.++|.|+||+ .      .++.|||+|++||+|||+.+|+++||+|+|+|.|.++
T Consensus         2 ~~~F~f~~F~~~-~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~~g~vasFsT~F~F~I~~~   80 (238)
T 1f9k_A            2 TQSFNFDHFEEN-SKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQP   80 (238)
T ss_dssp             EEEEEESSCCSS-CTTEEEEETCEECTTSCEECSCSEETTEECCSCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECC
T ss_pred             CeEEEcCCCCCC-CCCeEEccceEECcCCcEEecCccccCccccCCEEEEEECCCEEeecCCCCCeeeEEEEEEEEEecC
Confidence            578999999865 5689999 99997789999999 4      4689999999999999999999999999999999987


Q ss_pred             -CCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCcccceeeec
Q 042831          106 -NSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWW  184 (645)
Q Consensus       106 -~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~s~~~~~~~  184 (645)
                       ....+||||||||+|.... | ++.||||||+|..   +. +|+|||||||++|.|||++|||||||||+.|.++..| 
T Consensus        81 ~~~~~~gdGlAF~l~p~~~~-~-~~~g~~LGl~n~~---~~-~~~vAVEFDT~~N~~Dp~~nHVgIdvns~~S~~s~~~-  153 (238)
T 1f9k_A           81 YAYPEPADGLTFFMVPPNSP-Q-GEDGGNLGVFKPP---EG-DNAFAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHF-  153 (238)
T ss_dssp             CSSSCCCEEEEEEEECTTCC-C-CCSGGGTTTCCSS---CC-SCCEEEEEECSCCTTCCSSSEEEEEESSSSCSEEEEC-
T ss_pred             CCCCCCCCcEEEEEccCCCC-C-CCCCCcccccccC---CC-CcEEEEEEecccCCCCCCCCeEEEecCCccccceEee-
Confidence             6677899999999998753 4 5789999999865   45 8999999999999999999999999999999999988 


Q ss_pred             ccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCC--ceEEEEeecccce---eeeEEEEEeec
Q 042831          185 SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPE--FVTFGFSMATGVD---FAIFSIYSWEF  259 (645)
Q Consensus       185 ~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~--~~~vGfsastg~~---~~~~~i~~wsf  259 (645)
                       ++.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|++.|||+++|||  +|||||||+||..   .|.|+|++|+|
T Consensus       154 -~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~~~~~~~vGFSAsTG~~~~~~~~h~IlsWsF  230 (238)
T 1f9k_A          154 -QLENGGVANVVIKYDSPTKILNVVLAFHSV--GTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSF  230 (238)
T ss_dssp             -CCCTTCCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSTTCSEEEEEEEEEECSSTTCCCEEEEEEEEE
T ss_pred             -cccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCceeEEEEechHHhCCCCceEEEEEEeCcCCCCcccceEEEEEeEe
Confidence             488999999999999999999999998654  557899999999999999  9999999999999   99999999999


Q ss_pred             cCccc
Q 042831          260 NSSLE  264 (645)
Q Consensus       260 ~~~~~  264 (645)
                      ++.+.
T Consensus       231 ~s~~~  235 (238)
T 1f9k_A          231 TSSLQ  235 (238)
T ss_dssp             EEEC-
T ss_pred             Eeecc
Confidence            88753

>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii}

Probab=100.00  E-value=6.8e-58  Score=453.54  Aligned_cols=223  Identities=35%  Similarity=0.603  Sum_probs=200.6

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CC------CceEEEEeCCceecccCCCCCccceeEEEEEEEee
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NR------ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDS  104 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~------~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~  104 (645)
                      .+++|+|++|.++ ..++.++ ||.+.++|.|+||+ ..      ++.|||+|++||+|||+ +|+++||+|+|+|.|.+
T Consensus         2 ~~~~F~f~~F~~~-~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~G~a~y~~Pv~l~~~-~g~~~sFst~F~F~I~~   79 (240)
T 2fmd_A            2 NSVCFTFTDFESG-QQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLWQS-SSLVASFETTFTFSISQ   79 (240)
T ss_dssp             CEEEEEESSCCTT-CTTEEEEETCEECTTSCEECSCBCTTSCBCSSCEEEEEESSCEECCCT-TCSEEEEEEEEEEECCB
T ss_pred             cceEEEcCCCCCC-CCCeEEccceEEcCCCCEEeCCCCcCCcccCCCeEEEEECCCEEeeCC-CCCcCcEEEEEEEEEec
Confidence            4689999999865 5689999 99997789999999 44      68999999999999999 99999999999999998


Q ss_pred             CCCCCCCCeEEEEEccCCCCCCCC-CCCCcccCccCCCCCCCCCCEEEEEEecccCC--CCCCCCceeeecCCCccccee
Q 042831          105 RNSSYYADGLAFFLAPQGSKIPTN-KGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS--WDPTFSHVGIDINSVKSKKNV  181 (645)
Q Consensus       105 ~~~~~~g~GlaF~l~p~~~~~~~~-~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~--~d~~~~hvgidvns~~s~~~~  181 (645)
                      + ...+||||||||+|.... |.+ +.||||||++.+++++..+|+|||||||++|.  |||++|||||||||+.|.++.
T Consensus        80 ~-~~~~gdGlAF~l~p~~~~-p~~g~~g~~LGl~n~~~~~~~~n~~vAVEfDT~~N~~~~Dp~~nHvgIdvns~~S~~s~  157 (240)
T 2fmd_A           80 G-SSTPADALTFFIASPDTK-IPSGSGGRLLGLFGSSNNAGSDNGVVSVEFDTYPNTDIGDPNYRHIGIDVNSIRSKAAS  157 (240)
T ss_dssp             S-SSSCCCEEEEEEECTTCC-CCTTCCGGGTTTCSCCC----CCCEEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEE
T ss_pred             C-CCCCCCcEEEEEecCCCC-CCccCCCCcccccccCcCCCCcCcEEEEEeccccccccCCCCCCceeecccccccccee
Confidence            7 677899999999999865 655 88999999998766778899999999999996  899999999999999999999


Q ss_pred             eecccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccceeeeEEEEEeeccC
Q 042831          182 SWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNS  261 (645)
Q Consensus       182 ~~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~wsf~~  261 (645)
                      .|  ++.+|+.++|||+||+.+++|+|+|++.+.   ..|+|++.+||+.+||++|||||||+||...+.|+|++|+|++
T Consensus       158 ~~--~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~H~IlsWsF~s  232 (240)
T 2fmd_A          158 KW--DWQNGKTATAHISYNSASKRLSVVSSYPNS---SPVVVSFDVELNNVBPBWVRVGFSATTGQYTQTNNILAWSFRS  232 (240)
T ss_dssp             EC--CCCSSCEEEEEEEEETTTTEEEEEEECTTS---CCEEEEEECCGGGTSCSEEEEEEEEECCSSCBCCEEEEEEEEE
T ss_pred             EE--EeeCCCEEEEEEEEeCCCCEEEEEEecCCC---CceEEEEEechHHhCCCceEEEEEeccCCccccEEEEEEEeEe
Confidence            88  477999999999999999999999998664   4789999999999999999999999999999999999999988


Q ss_pred             ccc
Q 042831          262 SLE  264 (645)
Q Consensus       262 ~~~  264 (645)
                      .+.
T Consensus       233 ~~~  235 (240)
T 2fmd_A          233 SLM  235 (240)
T ss_dssp             EEE
T ss_pred             cCC
Confidence            764

>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A*

Probab=100.00  E-value=2.1e-58  Score=459.13  Aligned_cols=222  Identities=33%  Similarity=0.593  Sum_probs=201.2

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C------CCceEEEEeCCceecccCCCCCccceeEEEEEEEee
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N------RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDS  104 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~------~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~  104 (645)
                      .+++|+|++|..   .++.++ ||.+. +|.|+||+ .      .++.|||+|++||+|||+.+|+++||+|+|+|.|.+
T Consensus         2 ~~~~F~f~~F~~---~~l~l~GdA~v~-~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~   77 (253)
T 1g7y_A            2 DIQSFSFKNFNS---SSFILQGDATVS-SSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFA   77 (253)
T ss_dssp             EEEEEEESSCCS---SCEEEEETCEEE-TTEEECSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCC
T ss_pred             cceEEEcCCCCc---CCEEEecceEEe-CCEEEeCCCCCCCccccCCeEEEEECCCEEeecCCCCCccceEEEEEEEEec
Confidence            468999999984   479999 99995 89999999 4      358999999999999999999999999999999998


Q ss_pred             CCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC-CCCCCCceeeecCCCcccceeee
Q 042831          105 RNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS-WDPTFSHVGIDINSVKSKKNVSW  183 (645)
Q Consensus       105 ~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~-~d~~~~hvgidvns~~s~~~~~~  183 (645)
                      +....+||||||||+|.... | ++.||||||++..+ ++..+|+|||||||++|. |||++|||||||||+.|.++..|
T Consensus        78 ~~~~~~gdGlAF~l~p~~~~-~-~~~g~~LGl~n~~~-~~~~n~~vAVEFDT~~N~~~Dp~~nHVGIdvns~~S~~t~~~  154 (253)
T 1g7y_A           78 PNKSSSADGIAFALVPVGSE-P-KSNSGFLGVFDSDV-YDNSAQTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASW  154 (253)
T ss_dssp             SSGGGCCCEEEEEEEETTCC-C-CCCGGGTTTCSCSS-CCGGGCCEEEEEECSCCTTTCCSSCEEEEEESSSSCSEEEEC
T ss_pred             CCCCCCCCcEEEEEecCCCC-C-CCCCCcccccccCC-CCccCceEEEEecceeccCcCCCCCcEeeccCCccccceecc
Confidence            76667899999999998753 4 58899999998764 467899999999999997 99999999999999999999998


Q ss_pred             cccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccce---eeeEEEEEeecc
Q 042831          184 WSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD---FAIFSIYSWEFN  260 (645)
Q Consensus       184 ~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~~wsf~  260 (645)
                      +  +.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|++.+||+++|||+|||||||+||..   .+.|+|++|+|+
T Consensus       155 ~--l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~H~IlsWsF~  230 (253)
T 1g7y_A          155 G--LANGQNAEILITYNAATSLLVASLVHPSR--RTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFA  230 (253)
T ss_dssp             C--CCTTSEEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEECCSSSSCCCCCEEEEEEEE
T ss_pred             c--cCCCCeEEEEEEEeCCCCEEEEEEecCCC--CCcceEEEEechHHhCCCceEEEEEeCcCCCCcccceeEEEEEEEE
Confidence            4  78999999999999999999999997654  5578999999999999999999999999998   999999999998


Q ss_pred             Ccccc
Q 042831          261 SSLEM  265 (645)
Q Consensus       261 ~~~~~  265 (645)
                      +.+..
T Consensus       231 s~l~~  235 (253)
T 1g7y_A          231 SKLPD  235 (253)
T ss_dssp             EEECS
T ss_pred             eeCCC
Confidence            87643

>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A*

Probab=100.00  E-value=3.9e-58  Score=458.30  Aligned_cols=226  Identities=35%  Similarity=0.590  Sum_probs=200.1

Q ss_pred             ceeeEEeCCCC-CCCCCCeEEe-ecccCCCCcEecCC-C------CCceEEEEeCCceecccCCCCCccceeEEEEEEEe
Q 042831           33 SALTFNYTSFS-PQYDDNITYE-RAYPDSNRVIQLPA-N------RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVID  103 (645)
Q Consensus        33 ~~~~f~f~~f~-~~~~~~~~~~-~a~~~~~~~~~Lt~-~------~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~  103 (645)
                      .+++|+|++|. ++ ..++.++ ||.+. +|.|+||+ .      .++.|||+|++||+|||+.+|+++||+|+|+|.|.
T Consensus         3 ~~~~F~f~~F~~~~-~~~l~l~GdA~v~-~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vasFsT~F~F~I~   80 (257)
T 1hql_A            3 DSVSFTFPNFWSDV-EDSIIFQGDANTT-AGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFFLK   80 (257)
T ss_dssp             -CCEEEESCSCSCG-GGTEEEEETCEEE-TTEEECSCBCTTSCBCSSCEEEEEESSCEECCCSTTCCCCEEEEEEEEEEE
T ss_pred             cceEEEcCCCCCCC-CCCEEEccceEec-CCcEEecCCccCCcccCCCeEEEEECCCEecccCCCCCeeceEEEEEEEEe
Confidence            46789999998 43 4589999 99995 89999999 4      35899999999999999999999999999999999


Q ss_pred             eCCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCC-CCCCCCCEEEEEEecccCC-C-CCCCCceeeecCCCcccce
Q 042831          104 SRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNE-PLNSSIPFVAVEFDVYVNS-W-DPTFSHVGIDINSVKSKKN  180 (645)
Q Consensus       104 ~~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~-~~~~~~~~vaVEfDt~~n~-~-d~~~~hvgidvns~~s~~~  180 (645)
                      ++ ...+||||||||+|....  .++.||||||++.++ +++..+|+|||||||++|. | ||++|||||||||+.|.++
T Consensus        81 ~~-~~~~gdGlAF~l~p~~~~--~~~~g~~LGl~n~~~~~~~~~n~~vAVEFDT~~N~~~~Dp~~nHVGIdvNs~~S~~s  157 (257)
T 1hql_A           81 IT-GNGPADGLAFFLAPPDSD--VKDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVAT  157 (257)
T ss_dssp             EC-SSCCCCEEEEEEECTTCC--CCCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCCSSSCCCSSCEEEEEESSSSCSEE
T ss_pred             cC-CCCCCCcEEEEEecCCCC--CCCCCccccccccccccCCccCceEEEEecccccccccCCCCCceeeeeCCccccce
Confidence            87 677899999999998753  458899999998765 3677899999999999997 6 9999999999999999999


Q ss_pred             eeeccc-CCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeeccc-ceeeeEEEEEee
Q 042831          181 VSWWSD-VKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATG-VDFAIFSIYSWE  258 (645)
Q Consensus       181 ~~~~~~-~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg-~~~~~~~i~~ws  258 (645)
                      ..|++. +.+|+.++|||+||+.+++|+|+|.+.+.   ..|+|++.+||+.+|+|+|||||||+|| ...+.|+|++|+
T Consensus       158 ~~~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~e~~~vGFSAsTG~~~~~~H~IlsWs  234 (257)
T 1hql_A          158 KRWEDSDIFSGKIATARISYDGSAEILTVVLSYPDG---SDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWR  234 (257)
T ss_dssp             EECCHHHHTSCSCEEEEEEEETTTTEEEEEEEETTT---EEEEEEEECCGGGTSCSEEEEEEEEECCSCCCEEEEEEEEE
T ss_pred             eccCcccccCCceEEEEEEEeCCCCEEEEEEecCCC---CceeeEEeechHHhcCCceEEEEEeccCCCccceeEEEEEE
Confidence            998654 55699999999999999999999998654   4689999999999999999999999999 899999999999


Q ss_pred             ccCccccc
Q 042831          259 FNSSLEMD  266 (645)
Q Consensus       259 f~~~~~~~  266 (645)
                      |++.+...
T Consensus       235 F~s~~~~~  242 (257)
T 1hql_A          235 FSSNLQST  242 (257)
T ss_dssp             EEEEC---
T ss_pred             eEecCCCC
Confidence            98876543

>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A*

Probab=100.00  E-value=2.5e-58  Score=458.36  Aligned_cols=221  Identities=38%  Similarity=0.637  Sum_probs=200.3

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C------CCceEEEEeCCceecccCCCCCccceeEEEEEEEee
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N------RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDS  104 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~------~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~  104 (645)
                      .+++|+|++|..   .++.++ ||.+.++|.|+||+ .      .++.|||+|++||+|||+.+|+++||+|+|+|.|.+
T Consensus         2 ~~~~F~f~~F~~---~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~   78 (252)
T 1fat_A            2 NDIYFNFQRFNE---TNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTVASFATSFTFNIQV   78 (252)
T ss_dssp             CCEEEEESSCCG---GGEEEEETCEECTTSCEECSCCC-CCCCCTTCEEEEEEEEEEECEETTTTEEEEEEEEEEEECCC
T ss_pred             cceEEEcCCCCc---CCEEEeccEEECCCCEEEeCCCCCCCccccCCEEEEEECCCEecccCCCCcccceEEEEEEEEeC
Confidence            468899999984   489999 99997789999999 4      358999999999999999999999999999999998


Q ss_pred             CCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC-CCCCCCceeeecCCCcccceeee
Q 042831          105 RNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS-WDPTFSHVGIDINSVKSKKNVSW  183 (645)
Q Consensus       105 ~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~-~d~~~~hvgidvns~~s~~~~~~  183 (645)
                      ++...+||||||||+|.... | ++.||||||+|..   +..+|+|||||||++|. |||++|||||||||+.|.++..|
T Consensus        79 ~~~~~~gdGlAF~l~p~~~~-~-~~~g~~LGl~n~~---~~~~~~vAVEFDT~~N~~~Dp~~nHVGIdvNs~~S~~~~~~  153 (252)
T 1fat_A           79 PNNAGPADGLAFALVPVGSQ-P-KDKGGFLGLFDGS---NSNFHTVAVEFDTLYNKDWDPTERHIGIDVNSIRSIKTTRW  153 (252)
T ss_dssp             CSSCBCCEEEEEEEEETTCC-C-CCSGGGTTTCCSS---CCCCCCEEEEEECSCCTTTCCSSCEEEEEESSSSCSEEEEC
T ss_pred             CCCCCCCCcEEEEEccCCCC-C-CCCCccccccccC---CccCcEEEEEeecccCCCCCCCCCeEEEecCCccccceecc
Confidence            76677899999999998753 4 5789999999864   56899999999999998 99999999999999999999998


Q ss_pred             cccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccce---eeeEEEEEeecc
Q 042831          184 WSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD---FAIFSIYSWEFN  260 (645)
Q Consensus       184 ~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~~wsf~  260 (645)
                      +  +.+|+.++|||+||+.+++|+|+|.+.+.  |..|+|++.+||+++|||+|||||||+||..   .+.|+|++|+|+
T Consensus       154 ~--l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~H~IlsWsF~  229 (252)
T 1fat_A          154 D--FVNGENAEVLITYDSSTNLLVASLVYPSQ--KTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSFA  229 (252)
T ss_dssp             C--CCTTCEEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTBCCCCEEEEEEEE
T ss_pred             c--ccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCcceEEEEechHHhCCCceEEEEEeccCCCCcccceEEEEEEEEE
Confidence            4  78999999999999999999999998654  5578999999999999999999999999999   999999999998


Q ss_pred             Ccccc
Q 042831          261 SSLEM  265 (645)
Q Consensus       261 ~~~~~  265 (645)
                      +.+..
T Consensus       230 s~l~~  234 (252)
T 1fat_A          230 SKLSD  234 (252)
T ss_dssp             EEEC-
T ss_pred             eeCCC
Confidence            87653

>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A*

Probab=100.00  E-value=1.7e-57  Score=450.51  Aligned_cols=220  Identities=35%  Similarity=0.587  Sum_probs=197.4

Q ss_pred             ceeeEEeCCC----CCCCCCCeEEe-ecccCCCCcEecCC-C------CCceEEEEeCCceecccCCCCCccceeEEEEE
Q 042831           33 SALTFNYTSF----SPQYDDNITYE-RAYPDSNRVIQLPA-N------RETAGRATYNQSMRLWDKATGNLTDFTTHFSF  100 (645)
Q Consensus        33 ~~~~f~f~~f----~~~~~~~~~~~-~a~~~~~~~~~Lt~-~------~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f  100 (645)
                      .+++|+|++|    .++ ..++.++ ||.+. +|.|+||+ .      .++.|||+|++||+||| .+|+++||+|+|+|
T Consensus         2 ~~~~F~f~~F~~~~~~~-~~~l~l~GdA~i~-~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~~-~tg~vasFsT~F~F   78 (243)
T 1gsl_A            2 NTVNFTYPDFWSYSLKN-GTEITFLGDATRI-PGALQLTKTDANGNPVRSSAGQASYSEPVFLWD-STGKAASFYTSFTF   78 (243)
T ss_dssp             CCCEEEESCCCCTTCCT-TSSEEEEETCEEE-TTEEECSCBCTTSCBCSSEEEEEEESSCEECBC-TTSCBCEEEEEEEE
T ss_pred             cceEEEcCCCccccCCC-CCCEEEccceEec-CCcEEecCCccCCcccCCCeEEEEECCCEEccC-CCCCcCceEEEEEE
Confidence            3578999999    543 4689999 99995 89999999 4      35899999999999999 99999999999999


Q ss_pred             EEeeCCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCC-CCCCCCEEEEEEecccCC-C-CCCCCceeeecCCCcc
Q 042831          101 VIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEP-LNSSIPFVAVEFDVYVNS-W-DPTFSHVGIDINSVKS  177 (645)
Q Consensus       101 ~i~~~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~-~~~~~~~vaVEfDt~~n~-~-d~~~~hvgidvns~~s  177 (645)
                      .|.++ ...+||||||||+|....  .++.||||||++.+++ ++..+|+|||||||++|. | ||++|||||||||+.|
T Consensus        79 ~I~~~-~~~~gdGlAF~l~p~~~~--~~~~g~~LGl~n~~~~~~~~~n~~vAVEFDT~~N~~~~Dp~~nHvGIdvns~~S  155 (243)
T 1gsl_A           79 LLKNY-GAPTADGLAFFLAPVDSS--VKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVS  155 (243)
T ss_dssp             EEEES-SSSCBCEEEEEEEETTCC--CCCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCCGGGTCCSSCEEEEEESSSSC
T ss_pred             EEecC-CCCCCCCEEEEEecCCCC--CCCCCCcccccccccccCCccCcEEEEEeccccccccCCCCCCceeeccCCccc
Confidence            99987 667899999999998753  4588999999988653 677899999999999997 6 9999999999999999


Q ss_pred             cceeeecccCCC---CceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccceeeeEEE
Q 042831          178 KKNVSWWSDVKS---GRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSI  254 (645)
Q Consensus       178 ~~~~~~~~~~~~---g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i  254 (645)
                      .++..|+  +.+   |+.++|||+||+.+++|+|+|.+.+.   ..|+|++.+||+.+|||+|||||||+|| ..+.|+|
T Consensus       156 ~~~~~~~--l~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~~~~~vGFSAsTG-~~~~h~I  229 (243)
T 1gsl_A          156 VATTRWE--NDDAYGSSIATAHITYDARSKILTVLLSYEHG---RDYILSHVVDLAKVLPQKVRIGFSAGVG-YDEVTYI  229 (243)
T ss_dssp             SEEEECC--HHHHTSCCEEEEEEEEETTTTEEEEEEEETTS---CEEEEEEECCHHHHSCSEEEEEEEEEEC-BSEEEEE
T ss_pred             cceeeeE--EeccCCCcEEEEEEEEeCCCCEEEEEEecCCC---CceeEEEEechHHhCCCceEEEEEeccC-CcceeEE
Confidence            9999884  666   99999999999999999999998654   3689999999999999999999999999 9999999


Q ss_pred             EEeeccCccc
Q 042831          255 YSWEFNSSLE  264 (645)
Q Consensus       255 ~~wsf~~~~~  264 (645)
                      ++|+|++.+.
T Consensus       230 lsWsF~s~l~  239 (243)
T 1gsl_A          230 LSWHFFSTLD  239 (243)
T ss_dssp             EEEEEEEECT
T ss_pred             EEEEEEeecc
Confidence            9999988754

>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1

Probab=100.00  E-value=1.7e-57  Score=445.56  Aligned_cols=216  Identities=28%  Similarity=0.467  Sum_probs=196.2

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCCC----CCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCC
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPAN----RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNS  107 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~~----~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~  107 (645)
                      .+++|+|++|..   .++.++ ||.+.++|.|+||+.    .++.|||+|++||+|||+.+|+++||+|+|+|.|.+++.
T Consensus         2 ~~~~F~f~~F~~---~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~Gra~y~~Pv~l~~~~~g~vaSFsT~F~F~I~~~~~   78 (226)
T 1avb_A            2 NDASFNVETFNK---TNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTIDNLASFSTNFTFRINAKNI   78 (226)
T ss_dssp             EEEEEEESSCCG---GGEEEEETCEECTTSCEECSCSSSCCTTCEEEEEESSCEECEEGGGTEEEEEEEEEEEEEEESST
T ss_pred             cceEEEcCCCCc---cCEEEeccEEECCCCEEEeCCCCCCccCCeEEEEeCCCEEeecCCCCCcccEEEEEEEEEeCCCC
Confidence            467899999984   489999 999977899999983    358999999999999999999999999999999999877


Q ss_pred             CCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCcccceeeecccC
Q 042831          108 SYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDV  187 (645)
Q Consensus       108 ~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~s~~~~~~~~~~  187 (645)
                      ..+||||||||+|.++. |. +.||||||+|.. +++..+|+|||||||+       +|||||||||+.|.+++.|+..+
T Consensus        79 ~~~gdGlAF~l~p~~~~-p~-~~g~~LGl~n~~-~~~~~~~~vAVEFDT~-------~nHVGIdvNs~~S~~t~~~~~~l  148 (226)
T 1avb_A           79 ENSAYGLAFALVPVGSR-PK-LKGRYLGLFNTT-NYDRDAHTVAVVFDTV-------SNRIEIDVNSIRPIATESCNFGH  148 (226)
T ss_dssp             TSCCEEEEEEEEETTCC-CC-CCGGGTTTCSCS-SCCGGGCCEEEEEETT-------TTEEEEEESSSSCSEEEECCSGG
T ss_pred             CCCCCcEEEEEecCCCC-CC-CCCCcccccccC-CCCCcccEEEEEecCc-------CCccceeecCcccCccccCCccc
Confidence            78899999999999865 65 889999999875 4567899999999999       69999999999999999998888


Q ss_pred             CCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccce---eeeEEEEEeeccCcc
Q 042831          188 KSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD---FAIFSIYSWEFNSSL  263 (645)
Q Consensus       188 ~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~~wsf~~~~  263 (645)
                      .+|+.++|||+||+.+++|+|+|++.+..  ..|+|++.+||+++|||+|||||||+||..   .|.|+|++|+|++.+
T Consensus       149 ~~g~~~~v~I~Yd~~~~~L~V~l~~~~~~--~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~h~IlsWsF~s~l  225 (226)
T 1avb_A          149 NNGEKAEVRITYDSPKNDLRVSLLYPSSE--EKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWSFSSNF  225 (226)
T ss_dssp             GTTCEEEEEEEEEGGGTEEEEEEEETTTT--EEEEEEEECCHHHHSCSEEEEEEEEEECSSGGGCEEEEEEEEEEEEEE
T ss_pred             cCCCeEEEEEEEeCCCcEEEEEEeecCCC--ccceEEEEechHHhCCCceEEEEEeccCCCCcccceeEEEEEEEEeec
Confidence            89999999999999999999999986643  378999999999999999999999999999   999999999998754

>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1

Probab=100.00  E-value=2e-56  Score=441.56  Aligned_cols=215  Identities=28%  Similarity=0.468  Sum_probs=194.1

Q ss_pred             ceeeEEeCCCCCCCCCC-eEEe-ecccCCCCcEecCC-CC------CceEEEEeCCceecccCCCCCccceeEEEEEEEe
Q 042831           33 SALTFNYTSFSPQYDDN-ITYE-RAYPDSNRVIQLPA-NR------ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVID  103 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~-~~~~-~a~~~~~~~~~Lt~-~~------~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~  103 (645)
                      .+++|+|++|..   .+ +.++ ||.+.++|.|+||+ ..      .+.|||+|++||+|||+.  +++||+|+|+|.|.
T Consensus         2 ~~~~F~f~~F~~---~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~s~Gra~y~~Pi~l~d~~--~vaSFsT~F~F~I~   76 (240)
T 1ioa_A            2 TETSFNFPNFHT---DDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKDSN--NVASFNTNFTFIIR   76 (240)
T ss_dssp             CCCEEEESSCCT---TSSEEEEETCEECTTSCEETTCBCTTSSBCSSCBEEEEESSCEECBCSS--CBEEEEEEEEEECC
T ss_pred             cceEEEcCCCCC---CCcEEEccceEECCCCeEEeCCCCCCCccccCceEEEEECCCEEccCCC--ccccEEEEEEEEEe
Confidence            457899999984   37 9999 99997789999999 43      589999999999999986  89999999999999


Q ss_pred             eCCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCcccceeee
Q 042831          104 SRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSW  183 (645)
Q Consensus       104 ~~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~s~~~~~~  183 (645)
                      +++...+||||||||+|.++. |. +.||||||+|.. +++..+|+|||||||+       +|||||||||+.|.+++.|
T Consensus        77 ~~~~~~~gdGlAF~l~p~~~~-p~-~~g~~LGL~n~~-~~~~~~~~vAVEFDT~-------~nHVGIdvNs~~S~~t~~~  146 (240)
T 1ioa_A           77 AKNQSISAYGLAFALVPVNSP-PQ-KKQEFLGIFNTN-NPEPNARTVAVVFNTF-------KNRIDFDKNFIKPYVNENC  146 (240)
T ss_dssp             BSCTTSCCEEEEEEEEETTCC-CC-CCGGGTTTCCCS-SCCGGGCCEEEEEETT-------TTEEEEEESSSSCSEEEEC
T ss_pred             CCCCCCCCCcEEEEEecCCCC-CC-CCCCcccccccC-CCCCcCcEEEEEecCc-------CCceeeeeCCccccccccC
Confidence            887777899999999999865 66 889999999875 4567899999999999       5999999999999999999


Q ss_pred             cccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccce---eeeEEEEEeecc
Q 042831          184 WSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD---FAIFSIYSWEFN  260 (645)
Q Consensus       184 ~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~~wsf~  260 (645)
                      +..+.+|+.++|||+||+.+++|+|+|++.+..  ..|+|++.|||+++|||+|||||||+||..   .|.|+|++|+|+
T Consensus       147 ~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~~--~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~~H~IlsWsF~  224 (240)
T 1ioa_A          147 DFHKYNGEKTDVQITYDSSNNDLRVFLHFTVSQ--VKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDVLSWSFS  224 (240)
T ss_dssp             CHHHHCSSCEEEEEEEETTTTEEEEEEEETTTC--CEEEEEEECCGGGTSCSEEEEEEEEEECSSTTTCBCCEEEEEEEE
T ss_pred             CccccCCCEEEEEEEEeCCCcEEEEEEecCCCC--ccceeEEEechHHhCCCceEEEEEeccCCCCcccceeEEEEEEEE
Confidence            877779999999999999999999999986643  378999999999999999999999999999   999999999998


Q ss_pred             Cccc
Q 042831          261 SSLE  264 (645)
Q Consensus       261 ~~~~  264 (645)
                      +.+.
T Consensus       225 s~~~  228 (240)
T 1ioa_A          225 SKFR  228 (240)
T ss_dssp             EEEC
T ss_pred             eeCC
Confidence            7653

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.2e-53  Score=447.33  Aligned_cols=258  Identities=27%  Similarity=0.431  Sum_probs=207.2

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEc-----CCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ++|...++||+|+||.||+|++.     .+++.||||+++..+....++|.+|+++|++++|||||+++|+|.+.+.++|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            45667789999999999999975     3578999999988777778899999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcE
Q 042831          427 VYEFMPNGSLDSHLFKEN--------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA  492 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~  492 (645)
                      |||||++|+|.+++.+..              ..++|.+++.|+.|||+||.|||+   ++|+||||||+||||++++.+
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcE
Confidence            999999999999996532              369999999999999999999998   899999999999999999999


Q ss_pred             EEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHH
Q 042831          493 KIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVW  570 (645)
Q Consensus       493 kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~  570 (645)
                      ||+|||+++........ ......||+.|||||++.+..++.++|||||||+||||+| |+.||.....   ..+..   
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~---~~~~~---  271 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN---TEAID---  271 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH---HHHHH---
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH---HHHHH---
Confidence            99999999876543322 2344679999999999999999999999999999999999 9999975432   12222   


Q ss_pred             HHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          571 DLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       571 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                       .+.++..     +.....+    ...+.+|+.+||+.||++||||+||+++|+.-..
T Consensus       272 -~i~~g~~-----~~~p~~~----~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~  319 (329)
T 4aoj_A          272 -CITQGRE-----LERPRAC----PPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ  319 (329)
T ss_dssp             -HHHHTCC-----CCCCTTC----CHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             -HHHcCCC-----CCCcccc----cHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence             2222221     1111122    2457788899999999999999999999986433

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=7.1e-54  Score=443.12  Aligned_cols=255  Identities=28%  Similarity=0.479  Sum_probs=211.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEc-----CCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ++|...++||+|+||+||+|++.     .++..||||+++..+.+..++|.+|+++|++++|||||+++|+|.+++.++|
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            45677889999999999999875     3578999999988777778899999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhc------------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEE
Q 042831          427 VYEFMPNGSLDSHLFKE------------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKI  494 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl  494 (645)
                      |||||++|+|.++|...            ...++|.+++.|+.|||+||.|||+   ++|+||||||+|||+++++.+||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEE
Confidence            99999999999999753            2479999999999999999999999   89999999999999999999999


Q ss_pred             eeccCcccccccCCcc-eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHH
Q 042831          495 GDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDL  572 (645)
Q Consensus       495 ~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~  572 (645)
                      +|||+++......... .....||+.|||||++.++.++.++|||||||+||||+| |+.||.....   ..+..    .
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~---~~~~~----~  242 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NEVIE----C  242 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH---HHHHH----H
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHH----H
Confidence            9999998765433322 223568999999999999999999999999999999998 9999975432   12222    2


Q ss_pred             hcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          573 YGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       573 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..++....     ....    ..+.+.+|+.+||+.||++||||+||++.|+.
T Consensus       243 i~~~~~~~-----~p~~----~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~  286 (299)
T 4asz_A          243 ITQGRVLQ-----RPRT----CPQEVYELMLGCWQREPHMRKNIKGIHTLLQN  286 (299)
T ss_dssp             HHHTCCCC-----CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHcCCCCC-----CCcc----chHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            22332211     1112    23467788899999999999999999999874

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=3.7e-53  Score=438.15  Aligned_cols=266  Identities=28%  Similarity=0.474  Sum_probs=208.6

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ...+++...++||+|+||+||+|++.+   .||||+++..  +.+..++|.+|++++++++|||||+++|+|.+ +.++|
T Consensus        33 i~~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~i  108 (307)
T 3omv_A           33 IEASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI  108 (307)
T ss_dssp             CCTTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred             EcHHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEE
Confidence            344677788999999999999998753   4999998643  45567889999999999999999999999865 56899


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      |||||++|+|.++|......++|.++..|+.|||+||.|||+   ++||||||||+||||++++++||+|||+|+.....
T Consensus       109 VmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~  185 (307)
T 3omv_A          109 VTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW  185 (307)
T ss_dssp             EEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred             EEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence            999999999999998777789999999999999999999998   89999999999999999999999999999876543


Q ss_pred             CC-cceeecccCccccCcccccc---CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          507 KG-SQTTVLAGTMGYMAPECATT---GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       507 ~~-~~~~~~~gt~~y~aPE~~~~---~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      .. .......||+.|||||++..   +.++.++|||||||+||||+||+.||......      ..+......+..    
T Consensus       186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~------~~~~~~~~~~~~----  255 (307)
T 3omv_A          186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRGYA----  255 (307)
T ss_dssp             --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHTTCC----
T ss_pred             CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcCCC----
Confidence            32 23455789999999999863   46899999999999999999999999754432      112222222221    


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc-CCCCCCC
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF-EAPLPAL  632 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~-~~~~p~~  632 (645)
                      .|.+. .........+.+|+.+||+.||++||||.||+++|+. +.++|.+
T Consensus       256 ~p~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk~  305 (307)
T 3omv_A          256 SPDLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKI  305 (307)
T ss_dssp             CCCST-TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC-
T ss_pred             CCCcc-cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCCCC
Confidence            11111 1111223467788899999999999999999999874 3455554

>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B*

Probab=100.00  E-value=1.5e-52  Score=408.25  Aligned_cols=199  Identities=29%  Similarity=0.497  Sum_probs=175.2

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCC
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYY  110 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~  110 (645)
                      .+++|+|++|..   .++.++ ||.+.++|.|+||+ ..++.|||+|++||+|||+.+|+++||+|+|+|.|.+++...+
T Consensus         2 ~~~~F~f~~F~~---~~l~l~G~A~v~~~g~l~LT~~~~~~~Gra~y~~Pi~l~~~~~g~vaSFsT~F~F~I~~~~~~~~   78 (223)
T 1dhk_B            2 TETSFIIDAFNK---TNLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVASFDTNFTMNIRTHRQANS   78 (223)
T ss_dssp             CCCEEEESSCCG---GGEEEESSEEECTTSCEEESSSCSSEEEEEEESSCEESEETTTTEECEEEEEEEEEEECCC---C
T ss_pred             cceEEEcCCCCc---CCEEEeccEEECCCCEEEcCCCCCCCEEEEEECCCEEeecCCCCCccceEEEEEEEEeCCCCCCC
Confidence            457899999984   489999 99997789999999 6678999999999999999999999999999999998876778


Q ss_pred             CCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCcccceeeecccCCCC
Q 042831          111 ADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSG  190 (645)
Q Consensus       111 g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~s~~~~~~~~~~~~g  190 (645)
                      ||||||||+|.... |.                   +++|||||||+       +|||||||||+ |.++++|+..+.+|
T Consensus        79 gdGlAF~l~p~~~~-p~-------------------~~~vAVEFDT~-------~nHVGIdvNsi-S~~~~~~~~~l~~g  130 (223)
T 1dhk_B           79 AVGLDFVLVPVQPE-SK-------------------GDTVTVEFDTF-------LSRISIDVNNN-DIKSVPWDVHDYDG  130 (223)
T ss_dssp             CSEEEEEEEEC--------------------------CCEEEEEETT-------TTEEEEEETTE-EEEEEECCGGGTTT
T ss_pred             CCceEEEEecCCCC-CC-------------------ccEEEEEecCC-------CCcccccCCcc-ccccccCCccccCC
Confidence            99999999998643 22                   23799999999       59999999999 99999998888899


Q ss_pred             ceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccce---eeeEEEEEeeccCccc
Q 042831          191 RRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD---FAIFSIYSWEFNSSLE  264 (645)
Q Consensus       191 ~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~~wsf~~~~~  264 (645)
                      +.++|||+||+.+++|+|+|++.+..  .+|+|++.+||+++|||+|||||||+||..   .+.|+|++|+|++.+.
T Consensus       131 ~~~~v~I~Yd~~~~~L~V~l~~~~~~--~~~~ls~~vdLs~~l~e~~~VGFSAsTG~~~~~~~~H~IlsWsF~s~~~  205 (223)
T 1dhk_B          131 QNAEVRITYNSSTKVFSVSLSNPSTG--KSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLSWSFSSKFI  205 (223)
T ss_dssp             SCEEEEEEEETTTTEEEEEEECTTTC--CEEEEEEECCCCSGGGSEEEEEEEEEECSGGGSCCEEEEEEEEEEEEC-
T ss_pred             CEEEEEEEEeCCCCEEEEEEecCCCC--ccceEEEEechHHhCCCceEEEEEeccCCCccccceEEEEEEEEEeccc
Confidence            99999999999999999999987543  378999999999999999999999999999   9999999999988754

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=4.6e-53  Score=438.89  Aligned_cols=253  Identities=26%  Similarity=0.401  Sum_probs=208.8

Q ss_pred             CCCCCccCcCCcEEEEEEEEc-----CCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          354 FNDDQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      +...++||+|+||+||+|++.     .+++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++.++||
T Consensus        28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  107 (308)
T 4gt4_A           28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI  107 (308)
T ss_dssp             EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence            445678999999999999974     356899999997543 34467899999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhc---------------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcE
Q 042831          428 YEFMPNGSLDSHLFKE---------------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA  492 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~  492 (645)
                      ||||++|+|.++|...               ...++|..+..|+.|||+||.|||+   ++||||||||+||||++++++
T Consensus       108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~~  184 (308)
T 4gt4_A          108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNV  184 (308)
T ss_dssp             EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCE
T ss_pred             EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCCCE
Confidence            9999999999999643               2368999999999999999999999   899999999999999999999


Q ss_pred             EEeeccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHH
Q 042831          493 KIGDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVW  570 (645)
Q Consensus       493 kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~  570 (645)
                      ||+|||+++....... .......||+.|||||++.++.++.++|||||||+||||+| |+.||.....   ..+.    
T Consensus       185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~---~~~~----  257 (308)
T 4gt4_A          185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN---QDVV----  257 (308)
T ss_dssp             EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH---HHHH----
T ss_pred             EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH---HHHH----
Confidence            9999999987654332 23345679999999999999999999999999999999998 8999975432   2222    


Q ss_pred             HHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          571 DLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       571 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....++.....         +......+.+|+.+||+.||++||||+||+++|+.
T Consensus       258 ~~i~~~~~~~~---------p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a  303 (308)
T 4gt4_A          258 EMIRNRQVLPC---------PDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA  303 (308)
T ss_dssp             HHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             HHHHcCCCCCC---------cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            22333332211         11223467788899999999999999999999974

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=2.2e-52  Score=437.91  Aligned_cols=256  Identities=25%  Similarity=0.331  Sum_probs=215.2

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ..|+..++||+|+||.||+|+++.+|+.||||++........+.+.+|+++|++++|||||++++++.+++.+|||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            45788899999999999999999999999999997665555667889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++|+|.+++.+  ..+++..+..++.||+.||.|||+   ++|+||||||+||||+.++.+||+|||+|+.+.... ...
T Consensus       154 ~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~  227 (346)
T 4fih_A          154 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR  227 (346)
T ss_dssp             TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCB
T ss_pred             CCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCC-Ccc
Confidence            99999998864  458999999999999999999999   999999999999999999999999999998765432 234


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ...+||+.|||||++.+..++.++|||||||++|||++|+.||.....   ..+...+    .++     ..+.+..  .
T Consensus       228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~---~~~~~~i----~~~-----~~~~~~~--~  293 (346)
T 4fih_A          228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---LKAMKMI----RDN-----LPPRLKN--L  293 (346)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHHHHH----HHS-----SCCCCSC--G
T ss_pred             cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH---HHHHHHH----HcC-----CCCCCCc--c
Confidence            457899999999999999999999999999999999999999975432   1222211    111     1111110  0


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          592 GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ......+.+|+.+||+.||++|||++|+++|.|+..
T Consensus       294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~  329 (346)
T 4fih_A          294 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK  329 (346)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcC
Confidence            112245677889999999999999999999999864

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.8e-52  Score=439.28  Aligned_cols=254  Identities=22%  Similarity=0.326  Sum_probs=208.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ++|...++||+|+||.||+|++..+|+.||||++...  .....+.+.+|+++|++++|||||++++++.+++.+|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            5799999999999999999999999999999999754  34556789999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          430 FMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       430 y~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||++|+|.+++... ...+++.+.+.|+.||+.||.|||+   ++|+||||||+||||+.++.+||+|||+|+...... 
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-  179 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV-  179 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence            99999999999754 4567999999999999999999999   999999999999999999999999999998764321 


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ......+||+.|||||++.+..++.++|||||||+||||++|+.||.....   ..+...    +.++..     +.+..
T Consensus       180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~---~~~~~~----i~~~~~-----~~~~~  247 (350)
T 4b9d_A          180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM---KNLVLK----IISGSF-----PPVSL  247 (350)
T ss_dssp             HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHH----HHHTCC-----CCCCT
T ss_pred             ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH---HHHHHH----HHcCCC-----CCCCc
Confidence            223446799999999999999999999999999999999999999975432   122211    112221     11112


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .+    ...+.+|+.+||+.||++|||++|+++|.|+
T Consensus       248 ~~----s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~  280 (350)
T 4b9d_A          248 HY----SYDLRSLVSQLFKRNPRDRPSVNSILEKGFI  280 (350)
T ss_dssp             TS----CHHHHHHHHHHTCSSGGGSCCHHHHHTSHHH
T ss_pred             cC----CHHHHHHHHHHccCChhHCcCHHHHhcCHHh
Confidence            22    2456788899999999999999999998765

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=3.4e-51  Score=420.37  Aligned_cols=250  Identities=26%  Similarity=0.411  Sum_probs=204.4

Q ss_pred             CCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee----CCeEEEEE
Q 042831          355 NDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE----KKELLLVY  428 (645)
Q Consensus       355 ~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~----~~~~~lV~  428 (645)
                      ...++||+|+||.||+|.+..++..||+|++...  .....+.|.+|++++++++|||||+++++|..    ++.++|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            4456799999999999999999999999998643  44556789999999999999999999999865    35689999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCC--eeeccCCCCCeEECC-CCcEEEeeccCcccccc
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC--VVHRDIKSSNIMLDS-NFNAKIGDFGLARLVEH  505 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dlkp~NILld~-~~~~kl~DfGla~~~~~  505 (645)
                      |||++|+|.+++.+. ..+++..+..++.||+.||.|||+   ++  |+||||||+||||+. ++.+||+|||+|+....
T Consensus       109 Ey~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             eCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence            999999999999654 568999999999999999999998   66  999999999999984 79999999999985432


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                         ......+||+.|||||++.+ .++.++|||||||+||||+||+.||......      ..+......+....    .
T Consensus       185 ---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~------~~~~~~i~~~~~~~----~  250 (290)
T 3fpq_A          185 ---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA------AQIYRRVTSGVKPA----S  250 (290)
T ss_dssp             ---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH------HHHHHHHTTTCCCG----G
T ss_pred             ---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH------HHHHHHHHcCCCCC----C
Confidence               33455789999999998864 6999999999999999999999999743321      11222222322111    1


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      +....+    ..+.+|+.+||+.||++|||++|+++|.|+.
T Consensus       251 ~~~~~~----~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~  287 (290)
T 3fpq_A          251 FDKVAI----PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  287 (290)
T ss_dssp             GGGCCC----HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             CCccCC----HHHHHHHHHHccCChhHCcCHHHHhcCcccc
Confidence            111222    3467788999999999999999999999875

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=9.5e-52  Score=426.85  Aligned_cols=254  Identities=22%  Similarity=0.296  Sum_probs=214.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|+..++||+|+||+||+|++..+|+.||||++...   .....+.+.+|+++|++++|||||++++++++++.++|||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4689999999999999999999999999999999653   2334678999999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC-
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK-  507 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~-  507 (645)
                      |||++|+|.+++.+. +.+++.....++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+|+.+.... 
T Consensus       112 Ey~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~  187 (311)
T 4aw0_A          112 SYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK  187 (311)
T ss_dssp             CCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred             ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence            999999999999654 569999999999999999999999   999999999999999999999999999999765432 


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      .......+||+.|||||++.+..++.++||||+||+||||++|+.||...+.   ..+...    +.++..      .+.
T Consensus       188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~---~~~~~~----i~~~~~------~~p  254 (311)
T 4aw0_A          188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE---GLIFAK----IIKLEY------DFP  254 (311)
T ss_dssp             CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHH----HHHTCC------CCC
T ss_pred             cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHH----HHcCCC------CCC
Confidence            2344567899999999999999999999999999999999999999975432   222221    222221      111


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHH------HHHHhccC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQ------VIHVLNFE  626 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e------vl~~L~~~  626 (645)
                      ..++    ..+.+|+.+||+.||++|||++|      +++|.|+.
T Consensus       255 ~~~s----~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~  295 (311)
T 4aw0_A          255 EKFF----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE  295 (311)
T ss_dssp             TTCC----HHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGT
T ss_pred             cccC----HHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcC
Confidence            2222    35677889999999999999998      57888875

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=3.1e-51  Score=417.14  Aligned_cols=256  Identities=23%  Similarity=0.373  Sum_probs=201.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|+..+.||+|+||.||+|++..+|+.||||+++..   .....+.+.+|++++++++||||+++++++.+++.+++||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            5799999999999999999999999999999999754   2334567999999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+ +|+|.+++.+. ..+++.....++.||+.||.|||+   ++|+||||||+|||+++++++||+|||+|+.....  
T Consensus        93 Ey~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~--  165 (275)
T 3hyh_A           93 EYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--  165 (275)
T ss_dssp             ECC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred             eCC-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCC--
Confidence            999 68999988654 569999999999999999999999   99999999999999999999999999999865432  


Q ss_pred             cceeecccCccccCccccccCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          509 SQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~-t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      .......||+.|||||++.+..+ +.++||||+||++|||++|+.||.....   ..+..    ...++..      .+.
T Consensus       166 ~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~---~~~~~----~i~~~~~------~~p  232 (275)
T 3hyh_A          166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI---PVLFK----NISNGVY------TLP  232 (275)
T ss_dssp             ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHH----HHHHTCC------CCC
T ss_pred             CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH---HHHHH----HHHcCCC------CCC
Confidence            23345689999999999988775 5899999999999999999999975321   11221    2222221      111


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCCC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPA  631 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p~  631 (645)
                      ...+    ..+.+++.+||+.||++|||++|+++|.|+...+|.
T Consensus       233 ~~~s----~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~~p~  272 (275)
T 3hyh_A          233 KFLS----PGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPE  272 (275)
T ss_dssp             TTSC----HHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTTCCG
T ss_pred             CCCC----HHHHHHHHHHccCChhHCcCHHHHHcCcccccCCCh
Confidence            1222    356678899999999999999999999999776654

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=4e-51  Score=438.70  Aligned_cols=256  Identities=25%  Similarity=0.326  Sum_probs=215.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      +.|+..++||+|+||.||+|++..+|+.||||++........+.+.+|+.+|++++|||||++++++.+++.+|||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            46888999999999999999999999999999998766556677899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++|+|.+++..  ..+++.++..++.||+.||.|||+   ++|+||||||+||||+.++.+||+|||+|+.+.... ...
T Consensus       231 ~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~  304 (423)
T 4fie_A          231 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRR  304 (423)
T ss_dssp             TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-CCB
T ss_pred             CCCcHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCC-ccc
Confidence            99999998854  358999999999999999999999   999999999999999999999999999998765432 234


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ...+||+.|||||++.+..|+.++|||||||++|||++|+.||.....   ..+...    +.++     ..+.+..  .
T Consensus       305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~---~~~~~~----i~~~-----~~~~~~~--~  370 (423)
T 4fie_A          305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---LKAMKM----IRDN-----LPPRLKN--L  370 (423)
T ss_dssp             CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHHHH----HHHS-----CCCCCSC--T
T ss_pred             cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH---HHHHHH----HHcC-----CCCCCcc--c
Confidence            457899999999999999999999999999999999999999975432   122221    1111     1111111  0


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          592 GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ......+.+|+.+||+.||++|||++|+++|.|+..
T Consensus       371 ~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~  406 (423)
T 4fie_A          371 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK  406 (423)
T ss_dssp             TSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcC
Confidence            111245677889999999999999999999999864

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=6.4e-51  Score=425.55  Aligned_cols=252  Identities=19%  Similarity=0.187  Sum_probs=205.9

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .+.|...++||+|+||.||+|+++.+|+.||||+++....     ..+|+.++++++|||||++++++.+++.++|||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            3467778899999999999999999999999999975432     24699999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC-cEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF-NAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~-~~kl~DfGla~~~~~~~~~  509 (645)
                      |++|+|.+++.+. ..+++.....++.||+.||.|||+   ++|+||||||+||||+.++ .+||+|||+|+........
T Consensus       132 ~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~  207 (336)
T 4g3f_A          132 LEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG  207 (336)
T ss_dssp             CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred             cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence            9999999999654 469999999999999999999998   9999999999999999987 5999999999876543221


Q ss_pred             ----ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          510 ----QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       510 ----~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                          .....+||+.|||||++.+..++.++|||||||+||||++|+.||.........   ..+.   ....-..    .
T Consensus       208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~---~~i~---~~~~~~~----~  277 (336)
T 4g3f_A          208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC---LKIA---SEPPPIR----E  277 (336)
T ss_dssp             ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH---HHHH---HSCCGGG----G
T ss_pred             cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH---HHHH---cCCCCch----h
Confidence                123367999999999999999999999999999999999999999865543321   1111   1111000    1


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      +...+    ...+.+++.+||+.||++|||+.|++++|..
T Consensus       278 ~~~~~----s~~~~~li~~~L~~dP~~R~sa~el~~~l~~  313 (336)
T 4g3f_A          278 IPPSC----APLTAQAIQEGLRKEPVHRASAMELRRKVGK  313 (336)
T ss_dssp             SCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cCccC----CHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence            11222    2456778899999999999999999999864

>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A*

Probab=100.00  E-value=6.7e-50  Score=376.48  Aligned_cols=174  Identities=38%  Similarity=0.741  Sum_probs=158.7

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCC
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYY  110 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~  110 (645)
                      .+++|+|++|.++ ..+|.++ ||. .++|.|+||+ ...+.|||+|++||+|||+.+|+++||+|+|+|.|.+.....+
T Consensus         2 ~~~sF~f~~F~~~-~~~l~l~G~A~-~~~g~l~LT~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~~~~~~   79 (181)
T 2ltn_A            2 ETTSFLITKFSPD-QQNLIFQGDGY-TTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANFVTSFTFVINAPNSYNV   79 (181)
T ss_dssp             EEEEEEESSCCSS-CTTEEEEETCE-ECSSSEEEECSCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECSSTTSC
T ss_pred             cceEEEcCCCCCC-CCCEEEecccc-CCCCCeEcCCCCCCCEEEEEECCCEEeecCCCCCccceEEEEEEEEecCCCCCC
Confidence            4689999999965 5689999 999 5899999999 6678999999999999999999999999999999998876778


Q ss_pred             CCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC-CCCC--CCceeeecCCCcccceeeecccC
Q 042831          111 ADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS-WDPT--FSHVGIDINSVKSKKNVSWWSDV  187 (645)
Q Consensus       111 g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~-~d~~--~~hvgidvns~~s~~~~~~~~~~  187 (645)
                      ||||||||+|.++. |. +.||||||+|.. +++..+|+|||||||++|. |||+  +|||||||||+.|++++.|+  +
T Consensus        80 gdGlAF~l~p~~~~-p~-~~g~~LGL~n~~-~~~~~n~~vAVEFDT~~n~~~Dp~~~~nHVGIdvNs~~S~~t~~~~--l  154 (181)
T 2ltn_A           80 ADGFTFFIAPVDTK-PQ-TGGGYLGVFNSA-EYDKTTQTVAVEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKSWK--L  154 (181)
T ss_dssp             CCEEEEEEEETTCC-CC-CCGGGTTTCSCS-SCCTTSCCEEEEEECSCCTTTSCTTCCCEEEEEESSSSCSEEEECC--C
T ss_pred             CCceEEEEecCCCC-CC-CCCccccccccC-CCCccccEEEEEeccccccccCCCCCCCEEEEEcCCccccceeccc--c
Confidence            99999999999865 65 889999999876 3577899999999999998 9999  99999999999999999984  7


Q ss_pred             CCCceeEEEEEEcCCCceEEEEEecC
Q 042831          188 KSGRRNEAWISYNSSTHNLSVAFTGF  213 (645)
Q Consensus       188 ~~g~~~~~~I~Y~~~~~~l~v~l~~~  213 (645)
                      .+|+.++|||+||+.+++|+|+|++.
T Consensus       155 ~~G~~~~v~I~Yd~~~~~L~V~l~~~  180 (181)
T 2ltn_A          155 QNGEEANVVIAFNAATNVLTVSLTYP  180 (181)
T ss_dssp             CTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred             CCCCEEEEEEEEECCCCEEEEEEecC
Confidence            89999999999999999999999863

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=8.9e-51  Score=429.11  Aligned_cols=264  Identities=26%  Similarity=0.368  Sum_probs=215.5

Q ss_pred             hHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCC-----CeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCC-CCccEEEe
Q 042831          344 YKELALATNDFNDDQKLGQGGFGGVYKGFFRET-----NSYIAVKRVSQGS-KQGIKEYASEVKIISRLRH-RNLVQLLG  416 (645)
Q Consensus       344 ~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~-----~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H-~nlv~l~~  416 (645)
                      ..+++...++|...++||+|+||.||+|.+..+     ++.||||++.... ....++|.+|+++|.+++| ||||+++|
T Consensus        56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g  135 (353)
T 4ase_A           56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG  135 (353)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence            345666778899999999999999999998653     3689999997653 3456789999999999976 89999999


Q ss_pred             eeeeC-CeEEEEEEecCCCChhhhhhhc---------------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCC
Q 042831          417 WCHEK-KELLLVYEFMPNGSLDSHLFKE---------------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIK  480 (645)
Q Consensus       417 ~~~~~-~~~~lV~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk  480 (645)
                      +|.+. +.++||||||++|+|.++|...               ...++|..+..++.|||+||.|||+   ++|||||||
T Consensus       136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK  212 (353)
T 4ase_A          136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLA  212 (353)
T ss_dssp             EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred             EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccC
Confidence            99764 5789999999999999999642               2458999999999999999999999   999999999


Q ss_pred             CCCeEECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCC
Q 042831          481 SSNIMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKA  558 (645)
Q Consensus       481 p~NILld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~  558 (645)
                      |+|||+++++.+||+|||+|+........ ......||+.|||||++.++.++.++|||||||+||||+| |+.||....
T Consensus       213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~  292 (353)
T 4ase_A          213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  292 (353)
T ss_dssp             GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence            99999999999999999999876543332 3344678999999999999999999999999999999998 999997644


Q ss_pred             CCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          559 PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       559 ~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ...      .+.....++...     ......    ...+.+++..||+.||++|||+.|++++|+.
T Consensus       293 ~~~------~~~~~i~~g~~~-----~~p~~~----~~~~~~li~~c~~~dP~~RPt~~eil~~L~~  344 (353)
T 4ase_A          293 IDE------EFCRRLKEGTRM-----RAPDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  344 (353)
T ss_dssp             CSH------HHHHHHHHTCCC-----CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHH------HHHHHHHcCCCC-----CCCccC----CHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence            321      122222233211     111112    2456778899999999999999999999863

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=6.2e-50  Score=415.60  Aligned_cols=265  Identities=26%  Similarity=0.311  Sum_probs=200.4

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC----eEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK----ELLLV  427 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~----~~~lV  427 (645)
                      ++|...++||+|+||+||+|++.  |+.||||+++..... ...+..|+..+.+++|||||+++|+|.+++    .++||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV   79 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET--TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence            35667889999999999999984  789999999654322 222345666667899999999999998654    68999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhc-----CCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW-----EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      ||||++|+|.+++..  ..++|+.+.+++.|+++||+|||+.+     .++|+||||||+|||||.++++||+|||+++.
T Consensus        80 ~Ey~~~gsL~~~l~~--~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~  157 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  157 (303)
T ss_dssp             EECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             ecCCCCCcHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence            999999999999965  35899999999999999999999742     34899999999999999999999999999987


Q ss_pred             ccccCCc---ceeecccCccccCccccccC------CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc--------hhH
Q 042831          503 VEHAKGS---QTTVLAGTMGYMAPECATTG------KASKESDVYSFGIVALEIACGRKPINPKAPQGQ--------VSL  565 (645)
Q Consensus       503 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~--------~~l  565 (645)
                      .......   ......||+.|||||++.+.      .++.++|||||||+||||+||+.|+........        ...
T Consensus       158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~  237 (303)
T 3hmm_A          158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  237 (303)
T ss_dssp             EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence            6544322   22346799999999998754      367899999999999999999887753322110        001


Q ss_pred             HHHHHHHhcCCccccccCccccCC-CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          566 LQWVWDLYGNGKLLEAVDPRLCRD-FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       566 ~~~~~~~~~~~~l~~~~d~~l~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ...+.....++.+    +|.+... .+.+..+.+.+|+.+||+.||++||||.||++.|+.
T Consensus       238 ~~~~~~~~~~~~~----rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  294 (303)
T 3hmm_A          238 VEEMRKVVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             HHHHHHHHTTSCC----CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHhcccC----CCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            1222222222222    2222111 123566778899999999999999999999999864

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=5.7e-51  Score=420.87  Aligned_cols=253  Identities=24%  Similarity=0.307  Sum_probs=203.1

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEc---CCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFR---ETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~---~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ++|+..+.||+|+||+||+|+..   .+++.||||+++...  ......+.+|++++++++|||||++++++.+++.++|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            56889999999999999999874   467899999986542  2234468899999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      |||||++|+|.+++.+. ..+++.....++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+|+.....
T Consensus       104 vmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~  179 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH  179 (304)
T ss_dssp             EECCCTTCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred             EEEcCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence            99999999999999654 469999999999999999999999   99999999999999999999999999999865332


Q ss_pred             CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                      . ......+||+.|||||++.+..++.++|||||||+||||++|+.||...+.   ..+...+    .++..      .+
T Consensus       180 ~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~---~~~~~~i----~~~~~------~~  245 (304)
T 3ubd_A          180 E-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR---KETMTMI----LKAKL------GM  245 (304)
T ss_dssp             --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHH----HHCCC------CC
T ss_pred             C-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH---HHHHHHH----HcCCC------CC
Confidence            2 233456899999999999999999999999999999999999999975432   1222211    12211      11


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHhccC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPS-----IRQVIHVLNFE  626 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~~  626 (645)
                      ....    ...+.+++.+||+.||++|||     ++|+++|.|+.
T Consensus       246 p~~~----s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~  286 (304)
T 3ubd_A          246 PQFL----SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFS  286 (304)
T ss_dssp             CTTS----CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGT
T ss_pred             CCcC----CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCcccc
Confidence            1122    235677889999999999998     58999999985

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.7e-48  Score=401.87  Aligned_cols=254  Identities=25%  Similarity=0.359  Sum_probs=195.2

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC--------
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK--------  422 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~--------  422 (645)
                      ++|+..+.||+|+||.||+|+++.+|+.||||+++... ....+.+.+|+++|++++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            35888899999999999999999999999999997543 345578999999999999999999999987543        


Q ss_pred             ----eEEEEEEecCCCChhhhhhhcC--CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEee
Q 042831          423 ----ELLLVYEFMPNGSLDSHLFKEN--SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD  496 (645)
Q Consensus       423 ----~~~lV~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~D  496 (645)
                          .+++|||||++|+|.+++....  ...++...+.|+.||++||.|||+   ++|+||||||+|||++.++.+||+|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEcc
Confidence                3799999999999999997543  245677889999999999999999   8999999999999999999999999


Q ss_pred             ccCcccccccCCc-----------ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhH
Q 042831          497 FGLARLVEHAKGS-----------QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSL  565 (645)
Q Consensus       497 fGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l  565 (645)
                      ||+|+........           ..+..+||+.|||||++.+..++.++|||||||++|||++   ||...     ...
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~-----~~~  233 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ-----MER  233 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH-----HHH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc-----cHH
Confidence            9999876543221           1234579999999999999999999999999999999996   77521     111


Q ss_pred             HHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          566 LQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       566 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ...... ..+....    +.     ..+....+..++.+||++||++|||+.|+++|.+++
T Consensus       234 ~~~~~~-~~~~~~p----~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~  284 (299)
T 4g31_A          234 VRTLTD-VRNLKFP----PL-----FTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFE  284 (299)
T ss_dssp             HHHHHH-HHTTCCC----HH-----HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHHHH-HhcCCCC----CC-----CcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhC
Confidence            111111 1121111    10     112223456788999999999999999999999876

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.8e-46  Score=402.93  Aligned_cols=266  Identities=23%  Similarity=0.297  Sum_probs=209.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee------CCe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE------KKE  423 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~------~~~  423 (645)
                      ++|...++||+|+||.||+|++..+|+.||||+++..  .....+.+.+|+++|++++|||||++++++..      .+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            5788899999999999999999999999999999754  33456788999999999999999999998764      367


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      +|||||||+ |+|.+++.+ ...+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.+
T Consensus       134 ~~ivmE~~~-g~L~~~i~~-~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~  208 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGL  208 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTS-SSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred             EEEEEeCCC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence            899999995 789888854 4579999999999999999999999   99999999999999999999999999999866


Q ss_pred             cccC---CcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccc
Q 042831          504 EHAK---GSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL  579 (645)
Q Consensus       504 ~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~  579 (645)
                      ....   .......+||+.|||||++.+. .++.++||||+||++|||++|+.||......   .....+..........
T Consensus       209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~---~~l~~I~~~~g~p~~~  285 (398)
T 4b99_A          209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV---HQLQLIMMVLGTPSPA  285 (398)
T ss_dssp             -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH---HHHHHHHHHHCCCCGG
T ss_pred             ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH---HHHHHHHHhcCCCChH
Confidence            4322   2234457899999999998775 5699999999999999999999999765432   2222222222111100


Q ss_pred             c--------------ccCccccCCCCHH-----HHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          580 E--------------AVDPRLCRDFDGQ-----QIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       580 ~--------------~~d~~l~~~~~~~-----~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      .              .+.+.  ...+.+     ....+.+|+.+||+.||++|||++|+++|.|+..
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  350 (398)
T 4b99_A          286 VIQAVGAERVRAYIQSLPPR--QPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK  350 (398)
T ss_dssp             GTC-----CHHHHHHSSCCC--CCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTT
T ss_pred             HhhhhhhhhhhhhhhcCCCc--CCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCc
Confidence            0              00000  000111     1245678899999999999999999999999863

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=4.4e-46  Score=389.93  Aligned_cols=284  Identities=37%  Similarity=0.703  Sum_probs=250.6

Q ss_pred             CCccChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeee
Q 042831          339 PKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWC  418 (645)
Q Consensus       339 ~~~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~  418 (645)
                      ..++++.++..++++|...+.||+|+||.||+|++. +++.||||++........+.+.+|++++++++||||++++++|
T Consensus        26 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  104 (321)
T 2qkw_B           26 SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC  104 (321)
T ss_dssp             ----CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC
T ss_pred             ceeecHHHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            356778888889999999999999999999999975 5889999998877667778899999999999999999999999


Q ss_pred             eeCCeEEEEEEecCCCChhhhhhhcC---CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEe
Q 042831          419 HEKKELLLVYEFMPNGSLDSHLFKEN---SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG  495 (645)
Q Consensus       419 ~~~~~~~lV~Ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~  495 (645)
                      .+.+..++||||+++|+|.+++....   ..+++..++.++.|++.||.|||+   ++|+||||||+||+++.++.+||+
T Consensus       105 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~  181 (321)
T 2qkw_B          105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKIT  181 (321)
T ss_dssp             CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEEC
T ss_pred             cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEe
Confidence            99999999999999999999996543   358999999999999999999999   899999999999999999999999


Q ss_pred             eccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc
Q 042831          496 DFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG  574 (645)
Q Consensus       496 DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~  574 (645)
                      |||+++....... .......||+.|+|||++.++.++.++|||||||++|||++|+.||....+.+......|......
T Consensus       182 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~  261 (321)
T 2qkw_B          182 DFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN  261 (321)
T ss_dssp             CCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT
T ss_pred             ecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc
Confidence            9999986543222 223345689999999999988999999999999999999999999987777666777888877777


Q ss_pred             CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          575 NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       575 ~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .+.+...+++.+......+....+.+++.+||+.||++|||++|++++|+..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  313 (321)
T 2qkw_B          262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA  313 (321)
T ss_dssp             TTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            8888888888888788888999999999999999999999999999999854

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=3.7e-46  Score=391.00  Aligned_cols=294  Identities=37%  Similarity=0.666  Sum_probs=253.3

Q ss_pred             CCCccChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCCccEEEe
Q 042831          338 GPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-QGIKEYASEVKIISRLRHRNLVQLLG  416 (645)
Q Consensus       338 ~~~~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nlv~l~~  416 (645)
                      ...+|+++++....++|...+.||+|+||.||+|.+. +++.||||++..... .....+.+|++++.+++||||+++++
T Consensus        16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~   94 (326)
T 3uim_A           16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG   94 (326)
T ss_dssp             CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred             ccceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence            3578999999999999999999999999999999865 588999999875532 23347899999999999999999999


Q ss_pred             eeeeCCeEEEEEEecCCCChhhhhhhc---CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEE
Q 042831          417 WCHEKKELLLVYEFMPNGSLDSHLFKE---NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK  493 (645)
Q Consensus       417 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~k  493 (645)
                      +|...+..++||||+++|+|.+++...   ...+++..+..++.|++.||.|||+.+..+|+||||||+|||++.++.+|
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k  174 (326)
T 3uim_A           95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV  174 (326)
T ss_dssp             EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred             EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence            999999999999999999999999753   34599999999999999999999994334999999999999999999999


Q ss_pred             EeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCC--CCCchhHHHHHHH
Q 042831          494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKA--PQGQVSLLQWVWD  571 (645)
Q Consensus       494 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~--~~~~~~l~~~~~~  571 (645)
                      |+|||+++..............||+.|+|||++.+..++.++|||||||++|||++|+.||+...  ........+|+..
T Consensus       175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  254 (326)
T 3uim_A          175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG  254 (326)
T ss_dssp             ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred             eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence            99999998776555555556679999999999988899999999999999999999999996321  2234456677777


Q ss_pred             HhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCCCC
Q 042831          572 LYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPAL  632 (645)
Q Consensus       572 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p~~  632 (645)
                      ......+....+..+...+..++...+.+++.+||+.||++|||++|++++|+.+......
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~~  315 (326)
T 3uim_A          255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERW  315 (326)
T ss_dssp             TTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSSC
T ss_pred             HhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhhh
Confidence            7777778888888888888899999999999999999999999999999999987554443

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=3.5e-46  Score=419.42  Aligned_cols=258  Identities=24%  Similarity=0.325  Sum_probs=218.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|.+.+.||+|+||.||+|+++.+|+.||+|++........+.+.+|+++|++++|||||++++++.+++.++|||||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            36899999999999999999999999999999999877666677899999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC--CcEEEeeccCcccccccCC
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN--FNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~--~~~kl~DfGla~~~~~~~~  508 (645)
                      |++|+|.+++......+++.....++.||+.||.|||+   ++|+||||||+|||++.+  +.+||+|||+++.+...  
T Consensus       236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~--  310 (573)
T 3uto_A          236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK--  310 (573)
T ss_dssp             CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred             cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence            99999999997766789999999999999999999999   999999999999999854  89999999999876533  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ......+||+.|||||++.+..++.++||||+||++|||++|+.||......   .+..    .+..+...  +++....
T Consensus       311 ~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~---~~~~----~i~~~~~~--~~~~~~~  381 (573)
T 3uto_A          311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD---ETLR----NVKSCDWN--MDDSAFS  381 (573)
T ss_dssp             SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHH----HHHTTCCC--CCSGGGT
T ss_pred             CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHHH----HHHhCCCC--CCccccc
Confidence            3344568999999999999999999999999999999999999999754321   1221    11122110  1111112


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..+    ..+.+|+.+||+.||++|||+.|+++|.|+.
T Consensus       382 ~~s----~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~  415 (573)
T 3uto_A          382 GIS----EDGKDFIRKLLLADPNTRMTIHQALEHPWLT  415 (573)
T ss_dssp             TSC----HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTS
T ss_pred             CCC----HHHHHHHHHHccCChhHCcCHHHHhcCcCcC
Confidence            222    3566788999999999999999999999975

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.4e-45  Score=391.53  Aligned_cols=270  Identities=21%  Similarity=0.300  Sum_probs=205.4

Q ss_pred             HHHHhhcCCCCCCccCcCCcEEEEEEEEc---CCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeC
Q 042831          346 ELALATNDFNDDQKLGQGGFGGVYKGFFR---ETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEK  421 (645)
Q Consensus       346 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~---~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~  421 (645)
                      .+....++|...++||+|+||+||+|+++   .+++.||+|++.....  ..++.+|+++|.++ +||||+++++++.+.
T Consensus        15 ~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~   92 (361)
T 4f9c_A           15 AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKN   92 (361)
T ss_dssp             HSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred             hcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence            33345678999999999999999999875   4578999999865432  35678999999998 699999999999999


Q ss_pred             CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC-CcEEEeeccCc
Q 042831          422 KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN-FNAKIGDFGLA  500 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~-~~~kl~DfGla  500 (645)
                      +++++|||||++|+|.+++.    .+++.+...++.||+.||.|||+   ++|+||||||+|||++.+ +.+||+|||+|
T Consensus        93 ~~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla  165 (361)
T 4f9c_A           93 DHVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLA  165 (361)
T ss_dssp             TEEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             CEEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence            99999999999999999883    48999999999999999999999   999999999999999876 79999999999


Q ss_pred             ccccccCC---------------------------cceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCC
Q 042831          501 RLVEHAKG---------------------------SQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRK  552 (645)
Q Consensus       501 ~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~  552 (645)
                      +.......                           ......+||+.|+|||++.+. .++.++||||+||++|||++|+.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~  245 (361)
T 4f9c_A          166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY  245 (361)
T ss_dssp             EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred             cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence            85532211                           112345799999999998775 48999999999999999999999


Q ss_pred             CCCCCCCCCchhHHHHHHHHhcC----------Cc-c--------------------ccccCccccCC---------CCH
Q 042831          553 PINPKAPQGQVSLLQWVWDLYGN----------GK-L--------------------LEAVDPRLCRD---------FDG  592 (645)
Q Consensus       553 pf~~~~~~~~~~l~~~~~~~~~~----------~~-l--------------------~~~~d~~l~~~---------~~~  592 (645)
                      ||......  ...+..+....+.          +. .                    .+...|.+...         ...
T Consensus       246 Pf~~~~~~--~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  323 (361)
T 4f9c_A          246 PFYKASDD--LTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWN  323 (361)
T ss_dssp             SSSCCSSH--HHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CT
T ss_pred             CCCCCCCH--HHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccc
Confidence            99654322  1111111111100          00 0                    00000000000         000


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          593 QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       593 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .....+.+|+.+||+.||++|||++|+++|.|+.
T Consensus       324 ~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~  357 (361)
T 4f9c_A          324 EVPDEAYDLLDKLLDLNPASRITAEEALLHPFFK  357 (361)
T ss_dssp             TCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGT
T ss_pred             cCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccC
Confidence            1124567889999999999999999999999986

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=9.9e-46  Score=414.24  Aligned_cols=255  Identities=25%  Similarity=0.313  Sum_probs=207.6

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHH---HHHHHHHHhcCCCCccEEEeeeeeCCeE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEY---ASEVKIISRLRHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~---~~Ei~~l~~l~H~nlv~l~~~~~~~~~~  424 (645)
                      -++|...++||+|+||.||+|+++.+|+.||||++.+..   .......   ..++.+++.++|||||++++++++.+.+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            367999999999999999999999999999999986431   1222233   3446677788999999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      |||||||+||+|.+++.+. ..+++.....++.||+.||.|||+   ++||||||||+||||+.+|.+||+|||+|+...
T Consensus       268 ylVmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~  343 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFS  343 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             EEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence            9999999999999999654 569999999999999999999998   999999999999999999999999999998664


Q ss_pred             ccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          505 HAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       505 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ..   .....+||+.|||||++.. ..++.++|+|||||+||||++|+.||......+...+.....    ...      
T Consensus       344 ~~---~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~----~~~------  410 (689)
T 3v5w_A          344 KK---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL----TMA------  410 (689)
T ss_dssp             SC---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHH----HCC------
T ss_pred             CC---CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc----CCC------
Confidence            32   2345689999999999975 469999999999999999999999997544333222222111    111      


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHhccC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPS-----IRQVIHVLNFE  626 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~~  626 (645)
                      ..+...+    ...+..|+..||+.||++|++     ++||++|.|+.
T Consensus       411 ~~~p~~~----S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~  454 (689)
T 3v5w_A          411 VELPDSF----SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR  454 (689)
T ss_dssp             CCCCTTS----CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGT
T ss_pred             CCCCccC----CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCcccc
Confidence            1111222    235677889999999999998     79999999975

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=8.1e-44  Score=370.67  Aligned_cols=258  Identities=28%  Similarity=0.426  Sum_probs=214.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|...++||+|+||.||+|.+..+++.||+|++........+.+.+|++++.+++||||+++++++.+++..++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            45778889999999999999999999999999999777777888999999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +++|+|.+++......+++..+..++.|+++||.|||+   .+|+||||||+|||++.++.+||+|||+++.........
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  165 (310)
T 3s95_A           89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP  165 (310)
T ss_dssp             CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred             cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence            99999999998777789999999999999999999999   899999999999999999999999999998664332211


Q ss_pred             -------------eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCc
Q 042831          511 -------------TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK  577 (645)
Q Consensus       511 -------------~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~  577 (645)
                                   .....||+.|+|||++.+..++.++||||||+++|||++|..|+............. ..       
T Consensus       166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~-~~-------  237 (310)
T 3s95_A          166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN-VR-------  237 (310)
T ss_dssp             --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC-HH-------
T ss_pred             cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh-hh-------
Confidence                         114579999999999999999999999999999999999999987544322110000 00       


Q ss_pred             cccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          578 LLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       578 l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                        ...+......+    ...+.+++.+||+.||++|||++|+++.|+.
T Consensus       238 --~~~~~~~~~~~----~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~  279 (310)
T 3s95_A          238 --GFLDRYCPPNC----PPSFFPITVRCCDLDPEKRPSFVKLEHWLET  279 (310)
T ss_dssp             --HHHHHTCCTTC----CTTHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --ccccccCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence              00011111111    1346778899999999999999999999874

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.2e-43  Score=367.70  Aligned_cols=258  Identities=23%  Similarity=0.349  Sum_probs=215.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|...++||+|+||.||+|.+..+++.||||++........+.+.+|+.++++++||||+++++++..++..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            45789999999999999999999999999999999766555667889999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +++|+|.+++...  .+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++....... ..
T Consensus        99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~  172 (297)
T 3fxz_A           99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SK  172 (297)
T ss_dssp             CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-CC
T ss_pred             CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc-cc
Confidence            9999999998653  58999999999999999999999   899999999999999999999999999998654332 23


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||......      .........+.. ....       
T Consensus       173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~~~~~~~-~~~~-------  238 (297)
T 3fxz_A          173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL------RALYLIATNGTP-ELQN-------  238 (297)
T ss_dssp             BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHHCSC-CCSC-------
T ss_pred             cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCC-CCCC-------
Confidence            34467999999999999999999999999999999999999999754321      111111111111 0000       


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      +......+.+++.+||+.||++|||++|++++.++...
T Consensus       239 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          239 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             ccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence            11123457788899999999999999999999998743

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=6.6e-43  Score=367.28  Aligned_cols=254  Identities=22%  Similarity=0.324  Sum_probs=212.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      .++|...+.||+|+||.||+|++..+|+.||||++...  .....+.+.+|++++++++||||+++++++...+..++||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            46788999999999999999999999999999998654  4455678899999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++... ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++++||+|||+++.....  
T Consensus        94 e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~--  167 (328)
T 3fe3_A           94 EYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG--  167 (328)
T ss_dssp             CCCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS--
T ss_pred             ECCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC--
Confidence            999999999998654 458999999999999999999999   89999999999999999999999999999865432  


Q ss_pred             cceeecccCccccCccccccCCCC-cchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          509 SQTTVLAGTMGYMAPECATTGKAS-KESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t-~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      .......||+.|+|||++.+..+. .++|||||||++|||++|+.||......   .+..    ....+..      .+.
T Consensus       168 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~----~i~~~~~------~~p  234 (328)
T 3fe3_A          168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK---ELRE----RVLRGKY------RIP  234 (328)
T ss_dssp             CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCC------CCC
T ss_pred             CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH---HHHH----HHHhCCC------CCC
Confidence            233456799999999999887764 8999999999999999999999754321   1111    1112211      111


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ..    ....+.+++.+||+.||++|||++|+++|.|+..
T Consensus       235 ~~----~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~  270 (328)
T 3fe3_A          235 FY----MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINA  270 (328)
T ss_dssp             TT----SCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTT
T ss_pred             CC----CCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcC
Confidence            11    1235667889999999999999999999999764

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1.9e-43  Score=384.96  Aligned_cols=270  Identities=21%  Similarity=0.261  Sum_probs=220.1

Q ss_pred             cChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeee
Q 042831          342 FPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWC  418 (645)
Q Consensus       342 ~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~  418 (645)
                      +.++++....++|...++||+|+||+||+|++..+++.||+|++....   ......+.+|..++.+++||||++++++|
T Consensus        64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  143 (437)
T 4aw2_A           64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF  143 (437)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            456677788899999999999999999999999999999999986532   12233488999999999999999999999


Q ss_pred             eeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeecc
Q 042831          419 HEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFG  498 (645)
Q Consensus       419 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfG  498 (645)
                      .+++.+++|||||++|+|.+++.+....+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||
T Consensus       144 ~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFG  220 (437)
T 4aw2_A          144 QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFG  220 (437)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             eeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchh
Confidence            99999999999999999999997766789999999999999999999999   999999999999999999999999999


Q ss_pred             CcccccccCCcceeecccCccccCccccc-----cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHh
Q 042831          499 LARLVEHAKGSQTTVLAGTMGYMAPECAT-----TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY  573 (645)
Q Consensus       499 la~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~  573 (645)
                      +++..............||+.|+|||++.     .+.++.++|||||||++|||++|+.||......   .....+....
T Consensus       221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~---~~~~~i~~~~  297 (437)
T 4aw2_A          221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV---ETYGKIMNHK  297 (437)
T ss_dssp             TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHHHHHTHH
T ss_pred             hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh---HHHHhhhhcc
Confidence            99866544433444568999999999987     456899999999999999999999999754321   1222111100


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHhccC
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENL--RPSIRQVIHVLNFE  626 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~~~  626 (645)
                      ..     ..-|......+    ..+.+++.+||+.+|++  ||+++|+++|.++.
T Consensus       298 ~~-----~~~p~~~~~~s----~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~  343 (437)
T 4aw2_A          298 ER-----FQFPTQVTDVS----ENAKDLIRRLICSREHRLGQNGIEDFKKHPFFS  343 (437)
T ss_dssp             HH-----CCCCSSCCCSC----HHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGT
T ss_pred             cc-----ccCCcccccCC----HHHHHHHHHHhcccccccCCCCHHHHhCCCccC
Confidence            00     00111111222    35667788899888888  99999999999985

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=2e-42  Score=362.54  Aligned_cols=267  Identities=24%  Similarity=0.311  Sum_probs=220.4

Q ss_pred             CccChHHHHHhhcC----------CCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCC
Q 042831          340 KRFPYKELALATND----------FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHR  409 (645)
Q Consensus       340 ~~~~~~el~~~~~~----------f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~  409 (645)
                      ..++++++..+++.          |...++||+|+||.||+|++..+|+.||||++........+.+.+|+.++.+++||
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            45788888877764          66677999999999999999988999999999877666678899999999999999


Q ss_pred             CccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC
Q 042831          410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN  489 (645)
Q Consensus       410 nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~  489 (645)
                      ||+++++++...+..++||||+++++|.+++..  ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.+
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~  177 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLD  177 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTT
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCC
Confidence            999999999999999999999999999998853  468999999999999999999999   899999999999999999


Q ss_pred             CcEEEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHH
Q 042831          490 FNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWV  569 (645)
Q Consensus       490 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~  569 (645)
                      +.+||+|||+++...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   ...... 
T Consensus       178 ~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~---~~~~~~-  252 (321)
T 2c30_A          178 GRVKLSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP---VQAMKR-  252 (321)
T ss_dssp             CCEEECCCTTCEECCSSS-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHHHH-
T ss_pred             CcEEEeeeeeeeecccCc-cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHH-
Confidence            999999999998664322 223446799999999999999999999999999999999999999975432   111111 


Q ss_pred             HHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          570 WDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       570 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                         ....     ..+.+..  .......+.+++.+||+.||++|||++|++++.++.
T Consensus       253 ---~~~~-----~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~  299 (321)
T 2c30_A          253 ---LRDS-----PPPKLKN--SHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLL  299 (321)
T ss_dssp             ---HHHS-----SCCCCTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGG
T ss_pred             ---HhcC-----CCCCcCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhc
Confidence               1111     1111110  011124567788999999999999999999999875

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=7.1e-43  Score=364.15  Aligned_cols=252  Identities=27%  Similarity=0.346  Sum_probs=204.4

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      .++|...++||+|+||+||+|++..+++.||||++...  ......++..|+..+.++ +||||++++++|.+++..++|
T Consensus        56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv  135 (311)
T 3p1a_A           56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ  135 (311)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence            36799999999999999999999989999999998653  334445566677666665 899999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+ +++|.+++...+..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... 
T Consensus       136 ~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-  210 (311)
T 3p1a_A          136 TELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-  210 (311)
T ss_dssp             EECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred             Eecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeecccC-
Confidence            9999 779999988777789999999999999999999999   89999999999999999999999999998765432 


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                       .......||++|+|||++.+ .++.++|||||||++|||++|+.|+....          .+....++...    +.+.
T Consensus       211 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----------~~~~~~~~~~~----~~~~  274 (311)
T 3p1a_A          211 -GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----------GWQQLRQGYLP----PEFT  274 (311)
T ss_dssp             -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----------HHHHHTTTCCC----HHHH
T ss_pred             -CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----------HHHHHhccCCC----cccc
Confidence             22344569999999998875 79999999999999999999977764211          12222222221    1111


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ...    ...+.+++.+||++||++|||++|++++.|+..
T Consensus       275 ~~~----~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          275 AGL----SSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             TTS----CHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             cCC----CHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            112    246778889999999999999999999999764

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.9e-41  Score=351.93  Aligned_cols=278  Identities=38%  Similarity=0.655  Sum_probs=230.1

Q ss_pred             CCccChHHHHHhhcCCCCC------CccCcCCcEEEEEEEEcCCCeEEEEEEeccC----ChhhHHHHHHHHHHHHhcCC
Q 042831          339 PKRFPYKELALATNDFNDD------QKLGQGGFGGVYKGFFRETNSYIAVKRVSQG----SKQGIKEYASEVKIISRLRH  408 (645)
Q Consensus       339 ~~~~~~~el~~~~~~f~~~------~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~----~~~~~~~~~~Ei~~l~~l~H  408 (645)
                      ...|++.++..++++|...      +.||+|+||.||+|..  +++.||+|++...    .....+.+.+|+.++.+++|
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            4679999999999999888      8999999999999987  3788999998643    23456789999999999999


Q ss_pred             CCccEEEeeeeeCCeEEEEEEecCCCChhhhhhh--cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE
Q 042831          409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK--ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML  486 (645)
Q Consensus       409 ~nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl  486 (645)
                      |||+++++++.+.+..++||||+++++|.+++..  ....+++..++.++.||+.||.|||+   .+++||||||+||++
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili  166 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILL  166 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEE
Confidence            9999999999999999999999999999999864  34569999999999999999999999   899999999999999


Q ss_pred             CCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhH
Q 042831          487 DSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSL  565 (645)
Q Consensus       487 d~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l  565 (645)
                      +.++.+||+|||+++........ ......|++.|+|||.+.+ .++.++||||||+++|||++|+.||.........  
T Consensus       167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~--  243 (307)
T 2nru_A          167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL--  243 (307)
T ss_dssp             CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT--
T ss_pred             cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH--
Confidence            99999999999999866543222 2234578999999998764 5889999999999999999999999865443221  


Q ss_pred             HHHHHHHhc-CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          566 LQWVWDLYG-NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       566 ~~~~~~~~~-~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..+...... ...+.+.+++.+ ........+.+.+++..||+.||++|||+++++++|+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~  303 (307)
T 2nru_A          244 LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE  303 (307)
T ss_dssp             THHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence            222222221 223344455544 34566778889999999999999999999999999974

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=5.1e-43  Score=365.06  Aligned_cols=264  Identities=30%  Similarity=0.463  Sum_probs=203.1

Q ss_pred             ccChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeee
Q 042831          341 RFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWC  418 (645)
Q Consensus       341 ~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~  418 (645)
                      .+...++....++|...+.||+|+||.||+|++.  ++.||||++....  ....+++.+|++++.+++||||+++++++
T Consensus        26 ~~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  103 (309)
T 3p86_A           26 AMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV  103 (309)
T ss_dssp             ------CBCCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCCcccccCChhHceeeeEeecCCCeEEEEEEEC--CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            3444555566778999999999999999999874  7889999987543  44567899999999999999999999999


Q ss_pred             eeCCeEEEEEEecCCCChhhhhhhcC--CCCCHHHHHHHHHHHHHHHHHHHhhcCCC--eeeccCCCCCeEECCCCcEEE
Q 042831          419 HEKKELLLVYEFMPNGSLDSHLFKEN--SLLTWEFRYKIAQDLASGLLYLQEEWEQC--VVHRDIKSSNIMLDSNFNAKI  494 (645)
Q Consensus       419 ~~~~~~~lV~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dlkp~NILld~~~~~kl  494 (645)
                      ...+..++||||+++|+|.+++....  ..+++..++.++.||+.||.|||+   .+  |+||||||+|||++.++.+||
T Consensus       104 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL  180 (309)
T 3p86_A          104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKV  180 (309)
T ss_dssp             CSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEE
T ss_pred             EECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEE
Confidence            99999999999999999999996543  248999999999999999999998   78  999999999999999999999


Q ss_pred             eeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc
Q 042831          495 GDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG  574 (645)
Q Consensus       495 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~  574 (645)
                      +|||+++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+.   .
T Consensus       181 ~Dfg~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~---~~~~~~~---~  253 (309)
T 3p86_A          181 CDFGLSRLKAST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA---QVVAAVG---F  253 (309)
T ss_dssp             CCCC------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH---HHHHHHH---H
T ss_pred             CCCCCCcccccc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHH---h
Confidence            999999754332 22234467999999999999999999999999999999999999999754321   1111111   0


Q ss_pred             CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          575 NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       575 ~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....     ..+...+    ...+.+++.+||+.||++|||++|+++.|+.
T Consensus       254 ~~~~-----~~~~~~~----~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~  295 (309)
T 3p86_A          254 KCKR-----LEIPRNL----NPQVAAIIEGCWTNEPWKRPSFATIMDLLRP  295 (309)
T ss_dssp             SCCC-----CCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cCCC-----CCCCccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            1111     1111222    2457788899999999999999999999874

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=9.9e-43  Score=365.46  Aligned_cols=257  Identities=28%  Similarity=0.431  Sum_probs=209.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCC---eEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETN---SYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~---~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .++|...+.||+|+||.||+|.+..++   ..||||++... .....+.+.+|++++.+++||||+++++++.+++..++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            456788899999999999999997544   46999999765 44556789999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++|+|.+++......+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus       128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  204 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD  204 (325)
T ss_dssp             EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred             EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence            999999999999997777789999999999999999999999   89999999999999999999999999999876543


Q ss_pred             CCcc--eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          507 KGSQ--TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       507 ~~~~--~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ....  .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......   .+..    ....+..     
T Consensus       205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~~~~----~~~~~~~-----  272 (325)
T 3kul_A          205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR---DVIS----SVEEGYR-----  272 (325)
T ss_dssp             --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH---HHHH----HHHTTCC-----
T ss_pred             ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH---HHHH----HHHcCCC-----
Confidence            2222  223346778999999998899999999999999999999 99999754321   1111    1112211     


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .....    .....+.+++..||+.||++|||++|+++.|+.-
T Consensus       273 ~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l  311 (325)
T 3kul_A          273 LPAPM----GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL  311 (325)
T ss_dssp             CCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCC----CcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            11111    2234677888999999999999999999999853

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=3e-42  Score=370.25  Aligned_cols=260  Identities=21%  Similarity=0.274  Sum_probs=217.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|...+.||+|+||.||+|.+..+++.||+|.+..........+.+|++++.+++||||+++++++.+.+..++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            46799999999999999999999999999999999877666667899999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC--CCcEEEeeccCcccccccCC
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS--NFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~--~~~~kl~DfGla~~~~~~~~  508 (645)
                      +++|+|.+++......+++..+..++.||+.||.|||+   .+|+||||||+|||++.  ++.+||+|||+++.....  
T Consensus       130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~--  204 (387)
T 1kob_A          130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD--  204 (387)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT--
T ss_pred             CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCC--
Confidence            99999999997766689999999999999999999999   89999999999999974  577999999999876432  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ......+.    ....  ..++....
T Consensus       205 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~---~~~~~~i~----~~~~--~~~~~~~~  275 (387)
T 1kob_A          205 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD---LETLQNVK----RCDW--EFDEDAFS  275 (387)
T ss_dssp             SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH---HHHHHHHH----HCCC--CCCSSTTT
T ss_pred             cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH---HHHHHHHH----hCCC--CCCccccc
Confidence            223445799999999999999999999999999999999999999975432   11221111    1111  01111112


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      ..    ...+.+++.+||+.||++|||++|++++.++...
T Consensus       276 ~~----s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  311 (387)
T 1kob_A          276 SV----SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  311 (387)
T ss_dssp             TS----CHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             cC----CHHHHHHHHHHcCCChhHCcCHHHHhhCccccCC
Confidence            22    2457788899999999999999999999987643

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=1.7e-42  Score=363.34  Aligned_cols=259  Identities=25%  Similarity=0.352  Sum_probs=209.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|...+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.++.+++||||+++++++.+++..++||||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            57888999999999999999999999999999986543 23346788999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC-c
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-S  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~-~  509 (645)
                      +++|+|.+++.. ...+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....... .
T Consensus        87 ~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  162 (323)
T 3tki_A           87 CSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (323)
T ss_dssp             CTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             CCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence            999999999854 4569999999999999999999998   9999999999999999999999999999986543222 2


Q ss_pred             ceeecccCccccCccccccCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          510 QTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~-t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ....|.    .....   .++  ..
T Consensus       163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~----~~~~~---~~~--~~  232 (323)
T 3tki_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWK----EKKTY---LNP--WK  232 (323)
T ss_dssp             CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHHHHH----TTCTT---STT--GG
T ss_pred             ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHHh----ccccc---CCc--cc
Confidence            2334679999999999987775 7899999999999999999999976543321 111111    11100   010  01


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                          .....+.+++.+||+.||++|||++|++++.|+..+
T Consensus       233 ----~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          233 ----KIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             ----GSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             ----cCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence                122456678899999999999999999999998654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.8e-42  Score=361.41  Aligned_cols=259  Identities=19%  Similarity=0.255  Sum_probs=215.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|...+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            467888999999999999999999999999999986543 3456788999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC--CCcEEEeeccCcccccccCC
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS--NFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~--~~~~kl~DfGla~~~~~~~~  508 (645)
                      +++|+|.+++......+++..+..++.||+.||.|||+   .+|+||||||+|||++.  ++.+||+|||+++.....  
T Consensus        83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~--  157 (321)
T 1tki_A           83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG--  157 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT--
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC--
Confidence            99999999997766689999999999999999999999   89999999999999987  789999999999876432  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      .......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+    .++...  .++....
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~i----~~~~~~--~~~~~~~  228 (321)
T 1tki_A          158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ---QIIENI----MNAEYT--FDEEAFK  228 (321)
T ss_dssp             CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHHHH----HHTCCC--CCHHHHT
T ss_pred             CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH---HHHHHH----HcCCCC--CChhhhc
Confidence            2344567999999999999888999999999999999999999999754321   112111    111110  0111111


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      ..    ...+.+++.+||+.||++|||+.|+++|.|+...
T Consensus       229 ~~----s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          229 EI----SIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             TS----CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             cC----CHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence            11    2457788899999999999999999999997644

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1.3e-42  Score=366.24  Aligned_cols=254  Identities=28%  Similarity=0.377  Sum_probs=211.6

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      .++|...+.||+|+||.||+++...+|+.||+|+++..   .......+.+|+.++.+++||||+++++++...+..++|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            35788899999999999999999999999999999654   233456788999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+++|+|..++.+. ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..... 
T Consensus        84 ~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-  158 (337)
T 1o6l_A           84 MEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-  158 (337)
T ss_dssp             EECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-
T ss_pred             EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccC-
Confidence            9999999999988643 468999999999999999999999   89999999999999999999999999999754322 


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      ........||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..+..    ....+..      .+.
T Consensus       159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~~~~~----~i~~~~~------~~p  225 (337)
T 1o6l_A          159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ERLFE----LILMEEI------RFP  225 (337)
T ss_dssp             TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHH----HHHHCCC------CCC
T ss_pred             CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH---HHHHH----HHHcCCC------CCC
Confidence            2234456799999999999999999999999999999999999999975332   11111    1111111      111


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE  626 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~  626 (645)
                      ...    ...+..++.+||+.||++||     +++|+++|.++.
T Consensus       226 ~~~----s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~  265 (337)
T 1o6l_A          226 RTL----SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL  265 (337)
T ss_dssp             TTS----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGT
T ss_pred             CCC----CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcC
Confidence            122    24567788999999999999     999999999874

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=7.3e-42  Score=352.80  Aligned_cols=272  Identities=25%  Similarity=0.306  Sum_probs=212.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ++|...++||+|+||.||+|.+..+++.||+|++...  .....+.+.+|+.++.+++||||+++++++.+++..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            4688899999999999999999999999999998754  33445788899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+++ +|.+.+......+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... ..
T Consensus        82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~  156 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP-VR  156 (292)
T ss_dssp             CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC-CS
T ss_pred             cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCc-cc
Confidence            9965 6666666666789999999999999999999999   89999999999999999999999999999866432 22


Q ss_pred             ceeecccCccccCccccccCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc------cc
Q 042831          510 QTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE------AV  582 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~-~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~------~~  582 (645)
                      ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.....  .......+...........      ..
T Consensus       157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~  234 (292)
T 3o0g_A          157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND--VDDQLKRIFRLLGTPTEEQWPSMTKLP  234 (292)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS--HHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred             cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC--HHHHHHHHHHHhCCCChhhhhhhcccc
Confidence            334457899999999987766 79999999999999999998888643322  2223333333322111000      00


Q ss_pred             C-------c--cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCC
Q 042831          583 D-------P--RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLP  630 (645)
Q Consensus       583 d-------~--~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  630 (645)
                      +       +  .............+.+++.+||+.||++|||++|+++|.|+..-.|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~p  291 (292)
T 3o0g_A          235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP  291 (292)
T ss_dssp             TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC--
T ss_pred             cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCCC
Confidence            0       0  0000111122346678889999999999999999999999875433

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=2.9e-42  Score=368.51  Aligned_cols=256  Identities=27%  Similarity=0.420  Sum_probs=210.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEc-------CCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeC
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFR-------ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEK  421 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~-------~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~  421 (645)
                      .++|...+.||+|+||.||+|.+.       .++..||||+++.. .....+++.+|++++.++ +||||++++++|...
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            467888999999999999999874       24568999999765 344567899999999999 899999999999999


Q ss_pred             CeEEEEEEecCCCChhhhhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE
Q 042831          422 KELLLVYEFMPNGSLDSHLFKEN---------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML  486 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl  486 (645)
                      +..++||||+++|+|.+++....               ..+++..++.++.||+.||.|||+   ++|+||||||+|||+
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEE
Confidence            99999999999999999997543               358999999999999999999999   899999999999999


Q ss_pred             CCCCcEEEeeccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchh
Q 042831          487 DSNFNAKIGDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVS  564 (645)
Q Consensus       487 d~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~  564 (645)
                      +.++.+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||......   .
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~---~  313 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---E  313 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---G
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH---H
Confidence            9999999999999986543322 22233457889999999999999999999999999999999 99999754322   1


Q ss_pred             HHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          565 LLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       565 l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      +..    ....+..     +....    .....+.+++.+||+.||++||+++|+++.|+.
T Consensus       314 ~~~----~~~~~~~-----~~~~~----~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~  361 (370)
T 2psq_A          314 LFK----LLKEGHR-----MDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  361 (370)
T ss_dssp             HHH----HHHTTCC-----CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHH----HHhcCCC-----CCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            221    1222211     11111    223467788899999999999999999999874

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=3.9e-42  Score=358.64  Aligned_cols=272  Identities=24%  Similarity=0.285  Sum_probs=211.7

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ..++|...++||+|+||.||+|++.. ++.||+|++....  ....+.+.+|++++++++||||+++++++..++..++|
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   97 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV   97 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETT-SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECC-CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence            34678889999999999999999864 8899999986542  23356788999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||++ ++|.+++......+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        98 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  173 (311)
T 3niz_A           98 FEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV  173 (311)
T ss_dssp             EECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred             EcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence            99997 58888887777779999999999999999999999   899999999999999999999999999998654322


Q ss_pred             CcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc---c-
Q 042831          508 GSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA---V-  582 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~---~-  582 (645)
                       .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+.   ...+............   . 
T Consensus       174 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~  249 (311)
T 3niz_A          174 -RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ---LPKIFSILGTPNPREWPQVQE  249 (311)
T ss_dssp             -C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH---HHHHHHHHCCCCTTTSGGGTT
T ss_pred             -ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHHCCCChHHhhhhhc
Confidence             22334578999999999876 5689999999999999999999999986554432   2222222221110000   0 


Q ss_pred             -----Cccc--cCCCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCC
Q 042831          583 -----DPRL--CRDFDG-----QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLP  630 (645)
Q Consensus       583 -----d~~l--~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  630 (645)
                           +...  ......     .....+.+++.+||+.||++|||++|+++|.++..--|
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  309 (311)
T 3niz_A          250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDP  309 (311)
T ss_dssp             SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred             cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence                 0000  000000     11246778899999999999999999999999875433

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.6e-42  Score=358.07  Aligned_cols=263  Identities=25%  Similarity=0.417  Sum_probs=208.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEE----EcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeee--CCeE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGF----FRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKEL  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~----~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~--~~~~  424 (645)
                      .++|...++||+|+||.||+|+    ...+++.||||++........+.+.+|++++.+++||||++++++|..  ....
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            3567889999999999999998    456789999999988777778899999999999999999999999864  3568


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++||||+++|+|.+++......+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~  165 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLP  165 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred             EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence            99999999999999998776679999999999999999999998   899999999999999999999999999998764


Q ss_pred             ccCC--cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC---------CCchhHHHHHHHHh
Q 042831          505 HAKG--SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAP---------QGQVSLLQWVWDLY  573 (645)
Q Consensus       505 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~---------~~~~~l~~~~~~~~  573 (645)
                      ....  .......++..|+|||.+.+..++.++||||||+++|||++|..|+.....         ...........+..
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (295)
T 3ugc_A          166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL  245 (295)
T ss_dssp             ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred             CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH
Confidence            3322  122334577789999999999999999999999999999999999863211         00111111122222


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..+...         ..+......+.+++..||+.||++|||++|+++.|+.
T Consensus       246 ~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~  288 (295)
T 3ugc_A          246 KNNGRL---------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ  288 (295)
T ss_dssp             HTTCCC---------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             hccCcC---------CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence            221111         1111223567788899999999999999999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.9e-42  Score=374.42  Aligned_cols=270  Identities=21%  Similarity=0.238  Sum_probs=219.0

Q ss_pred             ccChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEee
Q 042831          341 RFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGW  417 (645)
Q Consensus       341 ~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~  417 (645)
                      .+.++++....++|...+.||+|+||.||+++++.+|+.||||++....   ....+.+.+|..++.+++||||++++++
T Consensus        50 ~~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~  129 (412)
T 2vd5_A           50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFA  129 (412)
T ss_dssp             HHHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred             hhhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEE
Confidence            3556777778899999999999999999999999999999999996532   2234568899999999999999999999


Q ss_pred             eeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeec
Q 042831          418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF  497 (645)
Q Consensus       418 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~Df  497 (645)
                      +.+.+.+++||||+++|+|.+++.+.+..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++++||+||
T Consensus       130 ~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DF  206 (412)
T 2vd5_A          130 FQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADF  206 (412)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred             EeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeec
Confidence            999999999999999999999998766689999999999999999999999   89999999999999999999999999


Q ss_pred             cCcccccccCCcceeecccCccccCccccc-------cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHH
Q 042831          498 GLARLVEHAKGSQTTVLAGTMGYMAPECAT-------TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVW  570 (645)
Q Consensus       498 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~  570 (645)
                      |+++..............||+.|+|||++.       .+.++.++|||||||++|||++|+.||......   .....+.
T Consensus       207 Gla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~---~~~~~i~  283 (412)
T 2vd5_A          207 GSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA---ETYGKIV  283 (412)
T ss_dssp             TTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHHHHH
T ss_pred             hhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH---HHHHHHH
Confidence            999876543333334468999999999987       356899999999999999999999999754321   1111111


Q ss_pred             HHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCC---CCHHHHHHHhccC
Q 042831          571 DLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR---PSIRQVIHVLNFE  626 (645)
Q Consensus       571 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~evl~~L~~~  626 (645)
                      ....  .+   .-|.....+    ...+.+++.+||+ +|++|   |+++|+++|.++.
T Consensus       284 ~~~~--~~---~~p~~~~~~----s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~  332 (412)
T 2vd5_A          284 HYKE--HL---SLPLVDEGV----PEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFF  332 (412)
T ss_dssp             THHH--HC---CCC----CC----CHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGT
T ss_pred             hccc--Cc---CCCccccCC----CHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcC
Confidence            1000  00   011111122    2456778899999 99998   6999999999985

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=1.6e-42  Score=370.90  Aligned_cols=256  Identities=29%  Similarity=0.472  Sum_probs=200.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEc---CCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFR---ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~---~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .++|...+.||+|+||.||+|++.   .++..||||+++.. .....++|.+|+.++.+++||||++++++|.+.+..++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            457999999999999999999986   45678999999765 34556789999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++|+|.+++.+....+++..++.++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  200 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD  200 (373)
T ss_dssp             EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred             EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence            999999999999998777789999999999999999999999   89999999999999999999999999999876543


Q ss_pred             CCcc--eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          507 KGSQ--TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       507 ~~~~--~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ....  .....++..|+|||++.+..++.++|||||||++|||++ |+.||......   .+..    ....+..     
T Consensus       201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~---~~~~----~i~~~~~-----  268 (373)
T 2qol_A          201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ---DVIK----AVDEGYR-----  268 (373)
T ss_dssp             -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH---HHHH----HHHTTEE-----
T ss_pred             CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCC-----
Confidence            2211  122345778999999999999999999999999999998 99999754321   1111    1112211     


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                          ..........+.+++..||+.||++||+++|+++.|+.
T Consensus       269 ----~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~  306 (373)
T 2qol_A          269 ----LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK  306 (373)
T ss_dssp             ----CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHH
Confidence                01111223567888999999999999999999999874

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2.2e-42  Score=352.28  Aligned_cols=254  Identities=27%  Similarity=0.486  Sum_probs=209.8

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|...+.||+|+||.||+|.+.. ++.||+|++..... ..+++.+|++++.+++||||+++++++.+++..++||||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF   86 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             hhhceeeheecCCCccEEEEEEecC-CCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence            4578888999999999999999874 67899999975432 346789999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +++++|.+++......+++..++.++.|+++||.|||+   .+++||||||+||+++.++.+||+|||+++.........
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  163 (269)
T 4hcu_A           87 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS  163 (269)
T ss_dssp             CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred             CCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccccccc
Confidence            99999999998777789999999999999999999998   899999999999999999999999999998654333223


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      .....++..|+|||.+....++.++||||||+++|||++ |+.||......   ....    ....+.  ....+   ..
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~---~~~~----~~~~~~--~~~~~---~~  231 (269)
T 4hcu_A          164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVVE----DISTGF--RLYKP---RL  231 (269)
T ss_dssp             TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH----HHHTTC--CCCCC---TT
T ss_pred             ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH---HHHH----HHhcCc--cCCCC---Cc
Confidence            333456788999999999999999999999999999999 99999754321   1111    111111  01111   11


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .    ...+.+++..||+.||++|||++|++++|+.
T Consensus       232 ~----~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~  263 (269)
T 4hcu_A          232 A----STHVYQIMNHCWRERPEDRPAFSRLLRQLAE  263 (269)
T ss_dssp             S----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             C----CHHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence            1    2457788899999999999999999999974

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=5e-43  Score=375.45  Aligned_cols=259  Identities=27%  Similarity=0.443  Sum_probs=211.6

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ....++|...+.||+|+||.||+|++..+++.||||.+.... ....++|.+|++++++++||||++++++|..++..++
T Consensus       110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  189 (377)
T 3cbl_A          110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI  189 (377)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             EEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence            344567888999999999999999999889999999987543 3445678899999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++|+|.+++...+..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus       190 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~  266 (377)
T 3cbl_A          190 VMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG  266 (377)
T ss_dssp             EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence            999999999999998766779999999999999999999999   89999999999999999999999999999754322


Q ss_pred             CCcce-eecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          507 KGSQT-TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       507 ~~~~~-~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      ..... ....++..|+|||.+..+.++.++|||||||++|||++ |+.||......       .+.+....+....  .+
T Consensus       267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~--~~  337 (377)
T 3cbl_A          267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-------QTREFVEKGGRLP--CP  337 (377)
T ss_dssp             EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-------HHHHHHHTTCCCC--CC
T ss_pred             ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCCCC--CC
Confidence            11111 11235678999999998899999999999999999998 99999754321       1122222222111  01


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                         ..+    ...+.+++..||+.||++|||++++++.|+.
T Consensus       338 ---~~~----~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  371 (377)
T 3cbl_A          338 ---ELC----PDAVFRLMEQCWAYEPGQRPSFSTIYQELQS  371 (377)
T ss_dssp             ---TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---CCC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence               112    2456788899999999999999999999863

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=1.1e-41  Score=362.56  Aligned_cols=257  Identities=22%  Similarity=0.280  Sum_probs=212.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChh------hHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ------GIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~  424 (645)
                      .++|...+.||+|+||.||++++..+|+.||+|.+......      ..+.+.+|+.++.+++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            45788899999999999999999999999999998754321      357889999999999999999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC----cEEEeeccCc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF----NAKIGDFGLA  500 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~----~~kl~DfGla  500 (645)
                      ++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++    .+||+|||++
T Consensus        91 ~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a  166 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (361)
T ss_dssp             EEEEECCCSCBHHHHHTT-CSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred             EEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence            999999999999999854 4579999999999999999999999   8999999999999998877    7999999999


Q ss_pred             ccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc
Q 042831          501 RLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE  580 (645)
Q Consensus       501 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~  580 (645)
                      +.....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+..    .+..+..  
T Consensus       167 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~---~~~~----~i~~~~~--  235 (361)
T 2yab_A          167 HEIEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---ETLA----NITAVSY--  235 (361)
T ss_dssp             EECCTT--CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHH----HHHTTCC--
T ss_pred             eEcCCC--CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----HHHhcCC--
Confidence            866432  2234467999999999999989999999999999999999999999754321   1111    1111111  


Q ss_pred             ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       581 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..++......    ...+.+++..||+.||++|||+.|+++|.|+.
T Consensus       236 ~~~~~~~~~~----s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  277 (361)
T 2yab_A          236 DFDEEFFSQT----SELAKDFIRKLLVKETRKRLTIQEALRHPWIT  277 (361)
T ss_dssp             CCCHHHHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTS
T ss_pred             CCCchhccCC----CHHHHHHHHHHCCCChhHCcCHHHHhcCcCcC
Confidence            0111111111    24567888999999999999999999999975

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.2e-41  Score=353.88  Aligned_cols=272  Identities=24%  Similarity=0.284  Sum_probs=216.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC--eEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK--ELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~--~~~lV  427 (645)
                      .++|...++||+|+||.||+|++..+++.||||++.... ....+.+.+|++++.+++||||+++++++...+  ..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            356888999999999999999999999999999997543 334677889999999999999999999988655  78999


Q ss_pred             EEecCCCChhhhhhhcC--CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE----CCCCcEEEeeccCcc
Q 042831          428 YEFMPNGSLDSHLFKEN--SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML----DSNFNAKIGDFGLAR  501 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl----d~~~~~kl~DfGla~  501 (645)
                      |||+++++|.+++....  ..+++..++.++.||+.||.|||+   .+|+||||||+|||+    +.++.+||+|||+++
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~  164 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred             EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence            99999999999997543  349999999999999999999999   899999999999999    888899999999998


Q ss_pred             cccccCCcceeecccCccccCccccc--------cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc-hhHHHHHHHH
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECAT--------TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ-VSLLQWVWDL  572 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~-~~l~~~~~~~  572 (645)
                      ......  ......||+.|+|||++.        +..++.++|||||||++|||++|+.||........ ......+...
T Consensus       165 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  242 (319)
T 4euu_A          165 ELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG  242 (319)
T ss_dssp             ECCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred             ecCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence            764432  233456999999999886        56789999999999999999999999975443222 2222222211


Q ss_pred             hcCCcccccc-----------CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          573 YGNGKLLEAV-----------DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       573 ~~~~~l~~~~-----------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      .....+....           +-.............+..++..||+.||++|||++|+++++..++
T Consensus       243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred             CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence            1111111000           001112345677788889999999999999999999999998664

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=3.1e-42  Score=350.72  Aligned_cols=256  Identities=25%  Similarity=0.401  Sum_probs=210.7

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ..++|...+.||+|+||.||+|.+.. +..||+|++..... ..+++.+|++++.+++||||+++++++.+++..++|||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWKG-QYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE   83 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             chhheeeeeeeccCCCceEEEEEecC-ceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence            45678889999999999999998864 67899999975432 34678999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+++++|.+++......+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++........
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  160 (268)
T 3sxs_A           84 YISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV  160 (268)
T ss_dssp             CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE
T ss_pred             ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhhh
Confidence            999999999998776779999999999999999999999   89999999999999999999999999999866543333


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......   ...   . ....+..  ...+..  
T Consensus       161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~---~-~~~~~~~--~~~~~~--  229 (268)
T 3sxs_A          161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS---EVV---L-KVSQGHR--LYRPHL--  229 (268)
T ss_dssp             ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHH---H-HHHTTCC--CCCCTT--
T ss_pred             cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH---HHH---H-HHHcCCC--CCCCCc--
Confidence            3334456778999999998889999999999999999999 99999754321   111   1 1111111  111111  


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                       .    ...+.+++..||+.||++|||++|++++|+.-
T Consensus       230 -~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l  262 (268)
T 3sxs_A          230 -A----SDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL  262 (268)
T ss_dssp             -S----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGG
T ss_pred             -C----hHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence             1    23577888999999999999999999999853

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=2.8e-42  Score=362.21  Aligned_cols=255  Identities=24%  Similarity=0.427  Sum_probs=202.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeE----EEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSY----IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~----vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      .++|...++||+|+||.||+|++..+++.    ||+|.+... .....+++.+|+.++.+++||||++++++|...+ .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~   92 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence            35688899999999999999998776654    588877543 3355678999999999999999999999998754 78


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +|+||+++|+|.+++......+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~  169 (327)
T 3poz_A           93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  169 (327)
T ss_dssp             EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence            9999999999999998877889999999999999999999999   8999999999999999999999999999987654


Q ss_pred             cCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          506 AKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       506 ~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      .... ......+|..|+|||++.+..++.++|||||||++|||++ |+.||.......   +..    ....+...    
T Consensus       170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~----~~~~~~~~----  238 (327)
T 3poz_A          170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISS----ILEKGERL----  238 (327)
T ss_dssp             TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH----HHHTTCCC----
T ss_pred             CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HHH----HHHcCCCC----
Confidence            3322 2233456889999999999999999999999999999999 999997544322   111    11111110    


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                           ..+......+..++.+||+.||++||+++|++++|+.
T Consensus       239 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~  275 (327)
T 3poz_A          239 -----PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK  275 (327)
T ss_dssp             -----CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHH
T ss_pred             -----CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence                 1111223467788899999999999999999999874

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=5.6e-42  Score=368.56  Aligned_cols=261  Identities=21%  Similarity=0.337  Sum_probs=210.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .++|...++||+|+||.||++++..+++.||+|+++..   .....+.+.+|..++.++ +||||+++++++.+.+.+++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            45788899999999999999999999999999999754   233445688899999887 89999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++|+|..++.+. ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.... 
T Consensus       131 V~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~-  205 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-  205 (396)
T ss_dssp             EEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC-
T ss_pred             EEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeeccc-
Confidence            99999999999988654 468999999999999999999999   8999999999999999999999999999985322 


Q ss_pred             CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc--hhHHHHHHHHhcCCccccccCc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ--VSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~--~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      .........||+.|+|||++.+..++.++|||||||++|||++|+.||......+.  ....+.+......+..      
T Consensus       206 ~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------  279 (396)
T 4dc2_A          206 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------  279 (396)
T ss_dssp             TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------
T ss_pred             CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------
Confidence            22334557899999999999999999999999999999999999999974432211  1111222222222211      


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHhccC
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSI------RQVIHVLNFE  626 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~L~~~  626 (645)
                      .+....    ...+..++..||+.||++||++      +|+++|.++.
T Consensus       280 ~~p~~~----s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~  323 (396)
T 4dc2_A          280 RIPRSL----SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR  323 (396)
T ss_dssp             CCCTTS----CHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTT
T ss_pred             CCCCcC----CHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCcccc
Confidence            111122    2456788899999999999984      8999999985

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=2.2e-42  Score=367.21  Aligned_cols=266  Identities=26%  Similarity=0.386  Sum_probs=214.5

Q ss_pred             cChHHHHHhhcCCCCCCccCcCCcEEEEEEEE-----cCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEE
Q 042831          342 FPYKELALATNDFNDDQKLGQGGFGGVYKGFF-----RETNSYIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQL  414 (645)
Q Consensus       342 ~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~-----~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l  414 (645)
                      +...++....++|...+.||+|+||.||+|.+     ..+++.||||++... .....+.+.+|++++.++ +||||+++
T Consensus        12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~   91 (359)
T 3vhe_A           12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   91 (359)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence            44566777788999999999999999999994     456789999999764 344567899999999999 78999999


Q ss_pred             EeeeeeCC-eEEEEEEecCCCChhhhhhhcCC------------------------------------------------
Q 042831          415 LGWCHEKK-ELLLVYEFMPNGSLDSHLFKENS------------------------------------------------  445 (645)
Q Consensus       415 ~~~~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~------------------------------------------------  445 (645)
                      +++|.+.+ ..++||||+++|+|.+++.....                                                
T Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (359)
T 3vhe_A           92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK  171 (359)
T ss_dssp             EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred             eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence            99998755 48999999999999999975422                                                


Q ss_pred             -----------------CCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          446 -----------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       446 -----------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                                       .+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.......
T Consensus       172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~  248 (359)
T 3vhe_A          172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD  248 (359)
T ss_dssp             ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred             ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence                             28999999999999999999999   8999999999999999999999999999986543322


Q ss_pred             -cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          509 -SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       509 -~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                       .......||+.|+|||++.+..++.++|||||||++|||++ |+.||........  +    ......+..     ...
T Consensus       249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~----~~~~~~~~~-----~~~  317 (359)
T 3vhe_A          249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--F----CRRLKEGTR-----MRA  317 (359)
T ss_dssp             CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH--H----HHHHHHTCC-----CCC
T ss_pred             chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH--H----HHHHHcCCC-----CCC
Confidence             23344568899999999999999999999999999999998 9999976543211  1    111111111     111


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....    ...+.+++..||+.||++|||++|++++|+.
T Consensus       318 ~~~~----~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  352 (359)
T 3vhe_A          318 PDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  352 (359)
T ss_dssp             CTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCC----CHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence            1112    2457788899999999999999999999974

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=6.3e-42  Score=354.08  Aligned_cols=260  Identities=27%  Similarity=0.375  Sum_probs=207.3

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      .++|...+.||+|+||.||+|.+..+++.||+|.+...   .....+.+.+|+.++.+++||||+++++++..++..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            45788899999999999999999999999999998543   344567899999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+++++|.+++... ..+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        90 ~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  165 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS  165 (294)
T ss_dssp             EECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred             EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence            9999999999998654 468999999999999999999999   899999999999999999999999999998765444


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      ........||+.|+|||.+.+..++.++||||||+++|||++|+.||......      ........+ .... ......
T Consensus       166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~-~~~~-~~~~~~  237 (294)
T 4eqm_A          166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV------SIAIKHIQD-SVPN-VTTDVR  237 (294)
T ss_dssp             ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH------HHHHHHHSS-CCCC-HHHHSC
T ss_pred             ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhhc-cCCC-cchhcc
Confidence            44445567999999999999999999999999999999999999999754321      111111111 1110 011111


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHhccC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRP-SIRQVIHVLNFE  626 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~~  626 (645)
                      ...    ...+..++.+|++.||++|| +++++.+.|..-
T Consensus       238 ~~~----~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~  273 (294)
T 4eqm_A          238 KDI----PQSLSNVILRATEKDKANRYKTIQEMKDDLSSV  273 (294)
T ss_dssp             TTS----CHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred             cCC----CHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence            222    24677888999999999999 899999888753

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=4.9e-42  Score=359.62  Aligned_cols=272  Identities=27%  Similarity=0.348  Sum_probs=209.6

Q ss_pred             HHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC---
Q 042831          346 ELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK---  422 (645)
Q Consensus       346 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~---  422 (645)
                      ++....++|...++||+|+||.||+|++.  ++.||||++.... .....+..|+.++.+++||||+++++++....   
T Consensus        18 n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   94 (322)
T 3soc_A           18 NLYFQSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVD   94 (322)
T ss_dssp             CEEETTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSS
T ss_pred             ccccchhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCC
Confidence            34445578899999999999999999886  7899999996543 33445667999999999999999999998743   


Q ss_pred             -eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhh-------cCCCeeeccCCCCCeEECCCCcEEE
Q 042831          423 -ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE-------WEQCVVHRDIKSSNIMLDSNFNAKI  494 (645)
Q Consensus       423 -~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------~~~~ivH~Dlkp~NILld~~~~~kl  494 (645)
                       .+++||||+++|+|.+++..  ..+++..++.++.|++.||.|||+.       +..+|+||||||+|||++.++.+||
T Consensus        95 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL  172 (322)
T 3soc_A           95 VDLWLITAFHEKGSLSDFLKA--NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI  172 (322)
T ss_dssp             EEEEEEEECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred             ceEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence             47999999999999999965  3489999999999999999999982       1129999999999999999999999


Q ss_pred             eeccCcccccccCCc-ceeecccCccccCccccccC-----CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHH-
Q 042831          495 GDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTG-----KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQ-  567 (645)
Q Consensus       495 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~-  567 (645)
                      +|||+++........ ......||+.|+|||++.+.     .++.++|||||||++|||++|+.||............. 
T Consensus       173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~  252 (322)
T 3soc_A          173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE  252 (322)
T ss_dssp             CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred             ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence            999999876543322 23335799999999998763     45678999999999999999999998655432221111 


Q ss_pred             --------HHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          568 --------WVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       568 --------~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                              ..............+.....   .......+.+++.+||+.||++|||++|+++.|+.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  315 (322)
T 3soc_A          253 IGQHPSLEDMQEVVVHKKKRPVLRDYWQ---KHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ  315 (322)
T ss_dssp             HCSSCCHHHHHHHHTTSCCCCCCCGGGG---SSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hccCCchhhhhhhhhcccCCCCcccccc---ccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence                    11111111111111111111   12455678899999999999999999999999873

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.2e-41  Score=350.23  Aligned_cols=254  Identities=24%  Similarity=0.343  Sum_probs=202.3

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh--------------------------hhHHHHHHHHHHHH
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK--------------------------QGIKEYASEVKIIS  404 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~Ei~~l~  404 (645)
                      .++|...+.||+|+||.||+|++..+++.||||++.....                          ...+.+.+|+++++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            3678889999999999999999999999999999865421                          12356889999999


Q ss_pred             hcCCCCccEEEeeeee--CCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCC
Q 042831          405 RLRHRNLVQLLGWCHE--KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS  482 (645)
Q Consensus       405 ~l~H~nlv~l~~~~~~--~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~  482 (645)
                      +++||||+++++++.+  .+..++||||+++++|.+++  ....+++..+..++.||+.||.|||+   .+|+||||||+
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~  166 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP--TLKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPS  166 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS--CSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHH
Confidence            9999999999999986  56899999999999998865  33579999999999999999999999   89999999999


Q ss_pred             CeEECCCCcEEEeeccCcccccccCCcceeecccCccccCccccccCC---CCcchhHHHHHHHHHHHHcCCCCCCCCCC
Q 042831          483 NIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK---ASKESDVYSFGIVALEIACGRKPINPKAP  559 (645)
Q Consensus       483 NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~t~~sDV~SfGvll~elltG~~pf~~~~~  559 (645)
                      |||++.++.+||+|||+++...... .......||+.|+|||.+.+..   .+.++|||||||++|||++|+.||.....
T Consensus       167 Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~  245 (298)
T 2zv2_A          167 NLLVGEDGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI  245 (298)
T ss_dssp             GEEECTTSCEEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             HEEECCCCCEEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence            9999999999999999998664322 2234467999999999987765   37889999999999999999999975321


Q ss_pred             CCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          560 QGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       560 ~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                         ..+.    .....+....   + .....    ...+.+++.+||+.||++|||+.|+++|.|+
T Consensus       246 ---~~~~----~~~~~~~~~~---~-~~~~~----~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~  296 (298)
T 2zv2_A          246 ---MCLH----SKIKSQALEF---P-DQPDI----AEDLKDLITRMLDKNPESRIVVPEIKLHPWV  296 (298)
T ss_dssp             ---HHHH----HHHHHCCCCC---C-SSSCC----CHHHHHHHHHHTCSCTTTSCCHHHHTTCHHH
T ss_pred             ---HHHH----HHHhcccCCC---C-Ccccc----CHHHHHHHHHHhhcChhhCCCHHHHhcCccc
Confidence               1111    1111111110   0 01122    2457788899999999999999999998875

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.3e-42  Score=375.38  Aligned_cols=266  Identities=21%  Similarity=0.274  Sum_probs=215.7

Q ss_pred             hHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeee
Q 042831          344 YKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHE  420 (645)
Q Consensus       344 ~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~  420 (645)
                      ++++....++|...++||+|+||.||+|++..+++.||+|++....   ....+.+.+|+.++..++||||++++++|.+
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            4566677889999999999999999999999999999999986421   2223457899999999999999999999999


Q ss_pred             CCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCc
Q 042831          421 KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA  500 (645)
Q Consensus       421 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla  500 (645)
                      ++.+++||||+++|+|.+++..  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||++
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~--~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a  215 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTC  215 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEecccee
Confidence            9999999999999999998854  358999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccccCCcceeecccCccccCccccccCC----CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC
Q 042831          501 RLVEHAKGSQTTVLAGTMGYMAPECATTGK----ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG  576 (645)
Q Consensus       501 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~  576 (645)
                      +..............||+.|+|||++....    ++.++|||||||++|||++|+.||......   .....+.    ++
T Consensus       216 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~---~~~~~i~----~~  288 (410)
T 3v8s_A          216 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV---GTYSKIM----NH  288 (410)
T ss_dssp             EECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHHHHH----TH
T ss_pred             EeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh---hHHHHHH----hc
Confidence            876544333344578999999999997655    789999999999999999999999754321   1111111    11


Q ss_pred             ccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHhccCC
Q 042831          577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENL--RPSIRQVIHVLNFEA  627 (645)
Q Consensus       577 ~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~~~~  627 (645)
                      ... ..-|. ...+    ...+..++.+||+.+|++  ||+++|+++|.++..
T Consensus       289 ~~~-~~~p~-~~~~----s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~  335 (410)
T 3v8s_A          289 KNS-LTFPD-DNDI----SKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN  335 (410)
T ss_dssp             HHH-CCCCT-TCCC----CHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCC
T ss_pred             ccc-ccCCC-cccc----cHHHHHHHHHHccChhhhCCCCCHHHHhcCccccC
Confidence            000 00010 0112    245667888999999988  999999999999853

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1e-42  Score=371.64  Aligned_cols=257  Identities=28%  Similarity=0.418  Sum_probs=208.6

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEE-----cCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFF-----RETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~-----~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~  424 (645)
                      .++|...+.||+|+||.||+|++     ..+++.||||++... ......++.+|+.++.+++||||+++++++...+..
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            35678889999999999999994     346789999999654 445567899999999999999999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhcC------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC---cEEEe
Q 042831          425 LLVYEFMPNGSLDSHLFKEN------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF---NAKIG  495 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~---~~kl~  495 (645)
                      ++||||+++|+|.+++....      ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++   .+||+
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~  226 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIG  226 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEEC
Confidence            99999999999999997543      468999999999999999999999   8999999999999999555   59999


Q ss_pred             eccCcccccccC-CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHh
Q 042831          496 DFGLARLVEHAK-GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLY  573 (645)
Q Consensus       496 DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~  573 (645)
                      |||+++...... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||......   .+..    ..
T Consensus       227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~---~~~~----~i  299 (367)
T 3l9p_A          227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ---EVLE----FV  299 (367)
T ss_dssp             CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHH----HH
T ss_pred             CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HH
Confidence            999998654322 223344568899999999999999999999999999999998 99999754321   1221    22


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..+...     .....+    ...+.+++.+||+.||++|||+.|++++|+.-
T Consensus       300 ~~~~~~-----~~~~~~----~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          300 TSGGRM-----DPPKNC----PGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             HTTCCC-----CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HcCCCC-----CCCccC----CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            222111     111122    24577888999999999999999999999864

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=6.9e-42  Score=366.57  Aligned_cols=256  Identities=25%  Similarity=0.365  Sum_probs=212.4

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      .++|...+.||+|+||.||++.+..+++.||+|.+...   .....+.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv   93 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV   93 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            35788899999999999999999999999999998643   233457888999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+++|+|..++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..... 
T Consensus        94 ~e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-  168 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-  168 (384)
T ss_dssp             ECCCTTEEHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred             EecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCC-
Confidence            999999999999864 4569999999999999999999999   89999999999999999999999999999865432 


Q ss_pred             CcceeecccCccccCcccccc---CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          508 GSQTTVLAGTMGYMAPECATT---GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~---~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                       .......||+.|+|||++..   ..++.++|||||||++|||++|+.||..........+.....    ...      .
T Consensus       169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~----~~~------~  237 (384)
T 4fr4_A          169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE----TTV------V  237 (384)
T ss_dssp             -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHH----HCC------C
T ss_pred             -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHh----hcc------c
Confidence             33445679999999999864   458999999999999999999999997654433322222111    111      1


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHhccC
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPS-IRQVIHVLNFE  626 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~L~~~  626 (645)
                      ..    +......+..++..||+.||++||+ ++++++|.++.
T Consensus       238 ~~----p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~  276 (384)
T 4fr4_A          238 TY----PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMN  276 (384)
T ss_dssp             CC----CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGT
T ss_pred             CC----CCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhh
Confidence            11    1112346778889999999999998 99999988875

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=6.3e-42  Score=359.53  Aligned_cols=257  Identities=23%  Similarity=0.296  Sum_probs=211.0

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh------hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK------QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~------~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~  424 (645)
                      .++|...+.||+|+||.||++.+..+++.||+|.+.....      ...+.+.+|+.++.+++||||+++++++...+..
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            3568889999999999999999999999999999875432      1357899999999999999999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC----cEEEeeccCc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF----NAKIGDFGLA  500 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~----~~kl~DfGla  500 (645)
                      ++||||+++++|.+++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++    .+||+|||++
T Consensus        90 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a  165 (326)
T 2y0a_A           90 ILILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  165 (326)
T ss_dssp             EEEEECCCSCBHHHHHTT-SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEEEcCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence            999999999999999854 4568999999999999999999998   8999999999999999887    8999999999


Q ss_pred             ccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc
Q 042831          501 RLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE  580 (645)
Q Consensus       501 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~  580 (645)
                      +......  ......||+.|+|||++....++.++|||||||++|||++|+.||......   .....+.    ....  
T Consensus       166 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~~~----~~~~--  234 (326)
T 2y0a_A          166 HKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---ETLANVS----AVNY--  234 (326)
T ss_dssp             EECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHHHHH----HTCC--
T ss_pred             eECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH---HHHHHHH----hcCC--
Confidence            8764322  233457999999999999889999999999999999999999999754321   1111111    1100  


Q ss_pred             ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       581 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ...+......    ...+.+++.+||+.||++|||++|+++|.++.
T Consensus       235 ~~~~~~~~~~----~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  276 (326)
T 2y0a_A          235 EFEDEYFSNT----SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK  276 (326)
T ss_dssp             CCCHHHHTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTS
T ss_pred             CcCccccccC----CHHHHHHHHHHccCChhhCCCHHHHhcCCCcc
Confidence            0011111111    24567888999999999999999999999875

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.1e-41  Score=366.46  Aligned_cols=272  Identities=19%  Similarity=0.256  Sum_probs=211.2

Q ss_pred             hhcCCCCCCccCcC--CcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          350 ATNDFNDDQKLGQG--GFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       350 ~~~~f~~~~~LG~G--~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      ..++|...++||+|  +||.||+|++..+++.||||++...  .....+.+.+|+.++++++||||+++++++.+++..+
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            34678889999999  9999999999999999999999754  3445677889999999999999999999999999999


Q ss_pred             EEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          426 LVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      +|||||++|+|.+++... ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||.+....
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~  179 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMI  179 (389)
T ss_dssp             EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred             EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence            999999999999999754 3569999999999999999999999   899999999999999999999999999986543


Q ss_pred             ccCC------cceeecccCccccCcccccc--CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc--
Q 042831          505 HAKG------SQTTVLAGTMGYMAPECATT--GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG--  574 (645)
Q Consensus       505 ~~~~------~~~~~~~gt~~y~aPE~~~~--~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~--  574 (645)
                      ....      .......||+.|+|||++.+  ..++.++|||||||++|||++|+.||.........  .........  
T Consensus       180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~  257 (389)
T 3gni_B          180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML--LEKLNGTVPCL  257 (389)
T ss_dssp             ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH--HHC--------
T ss_pred             cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH--HHHhcCCCCcc
Confidence            2111      11222468999999999987  57899999999999999999999999765433211  100000000  


Q ss_pred             --------------------CCccccccC---ccc------cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          575 --------------------NGKLLEAVD---PRL------CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       575 --------------------~~~l~~~~d---~~l------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                                          ...+.+.+.   +..      ...........+.+++.+||+.||++|||++|+++|.++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f  337 (389)
T 3gni_B          258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF  337 (389)
T ss_dssp             ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGG
T ss_pred             ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHH
Confidence                                000000000   000      000111223567889999999999999999999999987


Q ss_pred             C
Q 042831          626 E  626 (645)
Q Consensus       626 ~  626 (645)
                      .
T Consensus       338 ~  338 (389)
T 3gni_B          338 K  338 (389)
T ss_dssp             G
T ss_pred             H
Confidence            5

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=3.7e-42  Score=353.09  Aligned_cols=258  Identities=24%  Similarity=0.392  Sum_probs=208.5

Q ss_pred             HHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          347 LALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       347 l~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      +....++|...+.||+|+||.||+|.+. ++..||+|++..... ..+++.+|++++.+++||||+++++++.+.+..++
T Consensus        19 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   96 (283)
T 3gen_A           19 WEIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI   96 (283)
T ss_dssp             TBCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             ccCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEE
Confidence            3345567888999999999999999887 477899999975532 34678999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++++|.+++......+++..++.++.|++.||.|||+   ++|+||||||+||+++.++.+||+|||+++.....
T Consensus        97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  173 (283)
T 3gen_A           97 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD  173 (283)
T ss_dssp             EECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred             EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence            999999999999997766679999999999999999999999   89999999999999999999999999999866433


Q ss_pred             CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      .........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......   ...    ....++.     ...
T Consensus       174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~---~~~----~~~~~~~-----~~~  241 (283)
T 3gen_A          174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS---ETA----EHIAQGL-----RLY  241 (283)
T ss_dssp             HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHH----HHHHTTC-----CCC
T ss_pred             ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh---HHH----HHHhccc-----CCC
Confidence            2222333456788999999998899999999999999999998 99999754321   111    1111111     111


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .....    .+.+.+++.+||+.||++|||++|++++|+.
T Consensus       242 ~~~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~  277 (283)
T 3gen_A          242 RPHLA----SEKVYTIMYSCWHEKADERPTFKILLSNILD  277 (283)
T ss_dssp             CCTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCcC----CHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence            11111    2467788899999999999999999999963

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=4.3e-42  Score=362.10  Aligned_cols=256  Identities=23%  Similarity=0.336  Sum_probs=210.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|+||.||+|.+..+++.||+|++....   ......+.+|+.++++++||||+++++++...+..++||
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            57888999999999999999999999999999986432   223457889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+ +|+|.+++... ..+++..+..++.||+.||.|||+   .+|+||||||+|||+++++.+||+|||++....... 
T Consensus        89 E~~-~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~-  162 (336)
T 3h4j_B           89 EYA-GGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-  162 (336)
T ss_dssp             CCC-CEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB-
T ss_pred             ECC-CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc-
Confidence            999 78998888654 468999999999999999999999   899999999999999999999999999998654332 


Q ss_pred             cceeecccCccccCccccccCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          509 SQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~-t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                       ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.........                ..+.... 
T Consensus       163 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~----------------~~i~~~~-  224 (336)
T 3h4j_B          163 -FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF----------------KKVNSCV-  224 (336)
T ss_dssp             -TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB----------------CCCCSSC-
T ss_pred             -ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH----------------HHHHcCC-
Confidence             2334579999999999988775 78999999999999999999999754322111                0011000 


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCCC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPA  631 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p~  631 (645)
                      ...+......+.+++.+||+.||++|||++|++++.|+...+|.
T Consensus       225 ~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~~  268 (336)
T 3h4j_B          225 YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPD  268 (336)
T ss_dssp             CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTTCCG
T ss_pred             CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccCCcc
Confidence            00111122456788899999999999999999999998765554

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=2.7e-42  Score=382.82  Aligned_cols=260  Identities=25%  Similarity=0.413  Sum_probs=214.8

Q ss_pred             HHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          347 LALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       347 l~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      +.....+|...++||+|+||.||+|++..++..||||.++... ...++|.+|+.++.+++||||++++++|...+..++
T Consensus       215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l  293 (495)
T 1opk_A          215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI  293 (495)
T ss_dssp             CBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             cccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence            3445567888999999999999999999889999999997543 346789999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          427 VYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      |||||++|+|.+++... ...+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus       294 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  370 (495)
T 1opk_A          294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG  370 (495)
T ss_dssp             EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred             EEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence            99999999999999764 4569999999999999999999999   8999999999999999999999999999987643


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      ..........++..|+|||++..+.++.++|||||||+||||++ |+.||......   .+.+    ....+...     
T Consensus       371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~---~~~~----~~~~~~~~-----  438 (495)
T 1opk_A          371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYE----LLEKDYRM-----  438 (495)
T ss_dssp             CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHH----HHHTTCCC-----
T ss_pred             CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCCC-----
Confidence            32222233446778999999999899999999999999999999 99999764432   1121    12222110     


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                          ..+......+.+++.+||+.||++|||++++++.|+.-
T Consensus       439 ----~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~  476 (495)
T 1opk_A          439 ----ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  476 (495)
T ss_dssp             ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             ----CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence                11112234677888999999999999999999999754

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=2.5e-42  Score=366.41  Aligned_cols=255  Identities=24%  Similarity=0.348  Sum_probs=207.4

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~  425 (645)
                      ..++|...+.||+|+||.||+|++..+++.||||+++..   .....+.+.+|..++.++ +||||+++++++.+.+..+
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  100 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF  100 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence            346899999999999999999999999999999999754   233456788999999998 6999999999999999999


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +||||+++|+|..++.+. ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       101 lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~  176 (353)
T 3txo_A          101 FVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC  176 (353)
T ss_dssp             EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             EEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence            999999999999998654 568999999999999999999999   8999999999999999999999999999975332


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                       .........||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+..    .+.++..      .
T Consensus       177 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~~~----~i~~~~~------~  242 (353)
T 3txo_A          177 -NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED---DLFE----AILNDEV------V  242 (353)
T ss_dssp             ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCC------C
T ss_pred             -CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH---HHHH----HHHcCCC------C
Confidence             222344567999999999999888999999999999999999999999754321   1221    1111211      1


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHhccC
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSI------RQVIHVLNFE  626 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~L~~~  626 (645)
                      +...    ....+..++..||+.||++||++      +|+++|.++.
T Consensus       243 ~p~~----~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~  285 (353)
T 3txo_A          243 YPTW----LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFK  285 (353)
T ss_dssp             CCTT----SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGT
T ss_pred             CCCC----CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCccc
Confidence            1111    22456778899999999999998      8999999875

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=5.3e-42  Score=352.61  Aligned_cols=261  Identities=25%  Similarity=0.404  Sum_probs=217.3

Q ss_pred             HHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE
Q 042831          345 KELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       345 ~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~  424 (645)
                      +++....++|...+.||+|+||.||+|.+..++..||+|.+... ....+.+.+|++++++++||||+++++++.+++..
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   84 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF   84 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence            34455677899999999999999999999999999999999654 34567899999999999999999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          425 LLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      ++||||+++++|.+++... ...+++..++.++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||++...
T Consensus        85 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~  161 (288)
T 3kfa_A           85 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM  161 (288)
T ss_dssp             EEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred             EEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceec
Confidence            9999999999999999763 4569999999999999999999999   89999999999999999999999999999876


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      ............+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......   ..+.    ...+.     
T Consensus       162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~~~----~~~~~-----  229 (288)
T 3kfa_A          162 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYEL----LEKDY-----  229 (288)
T ss_dssp             CSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHH----HHTTC-----
T ss_pred             cCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH----HhccC-----
Confidence            5544444444567889999999999999999999999999999999 999997544321   1111    11111     


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .......    ....+.+++..|++.||++|||++|+++.|+.
T Consensus       230 ~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~  268 (288)
T 3kfa_A          230 RMERPEG----CPEKVYELMRACWQWNPSDRPSFAEIHQAFET  268 (288)
T ss_dssp             CCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCC----CCHHHHHHHHHHhCCChhhCcCHHHHHHHHHH
Confidence            1111111    23467788899999999999999999998863

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2.8e-42  Score=366.83  Aligned_cols=276  Identities=24%  Similarity=0.261  Sum_probs=219.0

Q ss_pred             CCccChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-----CCCccE
Q 042831          339 PKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-----HRNLVQ  413 (645)
Q Consensus       339 ~~~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----H~nlv~  413 (645)
                      ...+++++.....++|...++||+|+||.||+|++..+++.||||++... ....+.+..|++++.+++     ||||++
T Consensus        22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~  100 (360)
T 3llt_A           22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK  100 (360)
T ss_dssp             GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred             ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence            35677777888889999999999999999999999999999999998643 445567788999999997     999999


Q ss_pred             EEeeeeeCCeEEEEEEecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC----
Q 042831          414 LLGWCHEKKELLLVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS----  488 (645)
Q Consensus       414 l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~----  488 (645)
                      +++++...+..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.    
T Consensus       101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~  176 (360)
T 3llt_A          101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFE  176 (360)
T ss_dssp             EEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCC
T ss_pred             ccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEcccccc
Confidence            999999999999999999 999999997643 469999999999999999999998   99999999999999976    


Q ss_pred             ---------------------CCcEEEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHH
Q 042831          489 ---------------------NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEI  547 (645)
Q Consensus       489 ---------------------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~el  547 (645)
                                           ++.+||+|||+++....    ......||+.|+|||++.+..++.++|||||||++|||
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  252 (360)
T 3llt_A          177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL  252 (360)
T ss_dssp             EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred             ccccchhcccccccccccccCCCCEEEEeccCceecCC----CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHH
Confidence                                 78999999999976432    22345789999999999999999999999999999999


Q ss_pred             HcCCCCCCCCCCCCchhHHHHHHHHhcC-----------CccccccCc-cc----cCC-CCHH---------------HH
Q 042831          548 ACGRKPINPKAPQGQVSLLQWVWDLYGN-----------GKLLEAVDP-RL----CRD-FDGQ---------------QI  595 (645)
Q Consensus       548 ltG~~pf~~~~~~~~~~l~~~~~~~~~~-----------~~l~~~~d~-~l----~~~-~~~~---------------~~  595 (645)
                      ++|+.||......+   ....+......           ......++. .+    ... ....               ..
T Consensus       253 l~g~~pf~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  329 (360)
T 3llt_A          253 YTGSLLFRTHEHME---HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH  329 (360)
T ss_dssp             HHSSCSCCCSSHHH---HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCC
T ss_pred             HHCCCCCCCCcHHH---HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchH
Confidence            99999997544222   11111111100           000000000 00    000 0000               11


Q ss_pred             HHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          596 ERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       596 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      +.+.+++.+||+.||++|||++|+++|.|++
T Consensus       330 ~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          330 ELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            5677899999999999999999999998863

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=1.7e-41  Score=362.99  Aligned_cols=253  Identities=23%  Similarity=0.305  Sum_probs=206.2

Q ss_pred             CCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCCCC
Q 042831          356 DDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGS  435 (645)
Q Consensus       356 ~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~gs  435 (645)
                      ..+.||+|+||.||+|.+..+|+.||+|++........+++.+|++++.+++||||+++++++...+..++||||+++++
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~  172 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE  172 (373)
T ss_dssp             EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred             cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence            35679999999999999999999999999987766677889999999999999999999999999999999999999999


Q ss_pred             hhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE--CCCCcEEEeeccCcccccccCCcceee
Q 042831          436 LDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML--DSNFNAKIGDFGLARLVEHAKGSQTTV  513 (645)
Q Consensus       436 L~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl--d~~~~~kl~DfGla~~~~~~~~~~~~~  513 (645)
                      |.+++......+++..++.++.||+.||.|||+   .+|+||||||+|||+  +.++.+||+|||+++......  ....
T Consensus       173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~~~  247 (373)
T 2x4f_A          173 LFDRIIDESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KLKV  247 (373)
T ss_dssp             EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BCCC
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--cccc
Confidence            999997766779999999999999999999999   899999999999999  677899999999998764332  2334


Q ss_pred             cccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHH
Q 042831          514 LAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQ  593 (645)
Q Consensus       514 ~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~  593 (645)
                      ..||+.|+|||++....++.++|||||||++|||++|+.||......   ....   ..... ...  +.+.....+   
T Consensus       248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~---~~~~---~i~~~-~~~--~~~~~~~~~---  315 (373)
T 2x4f_A          248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA---ETLN---NILAC-RWD--LEDEEFQDI---  315 (373)
T ss_dssp             CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHH---HHHHT-CCC--SCSGGGTTS---
T ss_pred             ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH---HHHhc-cCC--CChhhhccC---
Confidence            56999999999999889999999999999999999999999754321   1111   11111 110  111111122   


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          594 QIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       594 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                       ...+.+++.+||+.||++|||++|++++.++.
T Consensus       316 -~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~  347 (373)
T 2x4f_A          316 -SEEAKEFISKLLIKEKSWRISASEALKHPWLS  347 (373)
T ss_dssp             -CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             -CHHHHHHHHHHcCCChhhCCCHHHHhcCcCcC
Confidence             24577888999999999999999999999864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.3e-41  Score=359.86  Aligned_cols=260  Identities=22%  Similarity=0.342  Sum_probs=211.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ++|...+.||+|+||.||++++..+++.||+|++...   .....+.+.+|..++.++ +||||+++++++...+..++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            5688899999999999999999999999999999754   344566788999999988 899999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+++|+|.+++.+. ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..... 
T Consensus        89 ~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~-  163 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-  163 (345)
T ss_dssp             ECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT-
T ss_pred             EeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCC-
Confidence            9999999999998654 468999999999999999999999   89999999999999999999999999999753322 


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc--hhHHHHHHHHhcCCccccccCcc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ--VSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~--~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      ........||+.|+|||++.+..++.++|||||||++|||++|+.||........  .............+..      .
T Consensus       164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~  237 (345)
T 3a8x_A          164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------R  237 (345)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------C
T ss_pred             CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------C
Confidence            2234456899999999999999999999999999999999999999975322111  0111222222222211      1


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHhccC
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSI------RQVIHVLNFE  626 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~L~~~  626 (645)
                      +....    ...+..++.+||+.||++||++      +|+++|.++.
T Consensus       238 ~p~~~----s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~  280 (345)
T 3a8x_A          238 IPRSL----SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR  280 (345)
T ss_dssp             CCTTS----CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGT
T ss_pred             CCCCC----CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccC
Confidence            11122    2456778899999999999985      8999999875

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=4.1e-41  Score=351.81  Aligned_cols=265  Identities=26%  Similarity=0.409  Sum_probs=198.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .++|...++||+|+||.||+|.+..+|+.||+|++..... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            4678999999999999999999999999999999975533 345678899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhc-----CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          430 FMPNGSLDSHLFKE-----NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       430 y~~~gsL~~~l~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      |++ |+|.+++...     ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            997 6999888643     2468999999999999999999999   899999999999999999999999999998654


Q ss_pred             ccCCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCc--cc--
Q 042831          505 HAKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK--LL--  579 (645)
Q Consensus       505 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~--l~--  579 (645)
                      ... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||......   .....+.+..+...  ..  
T Consensus       160 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~  235 (317)
T 2pmi_A          160 IPV-NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE---EQLKLIFDIMGTPNESLWPS  235 (317)
T ss_dssp             SCC-CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCSCCTTTCGG
T ss_pred             CCc-ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCCCChhHhhh
Confidence            322 222345689999999998764 6899999999999999999999999754432   22233332221110  00  


Q ss_pred             --------------------cccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          580 --------------------EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       580 --------------------~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                                          +.+.+......    ...+.+++.+||+.||++|||++|++++.++..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  299 (317)
T 2pmi_A          236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPL----DGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE  299 (317)
T ss_dssp             GGGCTTCCTTCCCCCCCCSHHHHGGGCSSCC----CHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred             hhhhhhcccccccccchhHHHhhcccccccC----CHHHHHHHHHHCCCCcccCCCHHHHhCChhhhc
Confidence                                00001111111    246778899999999999999999999999864

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=2.9e-41  Score=354.75  Aligned_cols=258  Identities=21%  Similarity=0.240  Sum_probs=212.0

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .++|...+.||+|+||.||+|++..+++.||||.+.....  .+++.+|++++.++ +||||+++++++..++..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            4678899999999999999999999999999999865432  24678999999999 89999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc-----EEEeeccCccccc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN-----AKIGDFGLARLVE  504 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~-----~kl~DfGla~~~~  504 (645)
                      |+ +++|.+++......+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.     +||+|||+++...
T Consensus        86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~  161 (330)
T 2izr_A           86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI  161 (330)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred             eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence            99 999999998766789999999999999999999999   89999999999999999887     9999999998654


Q ss_pred             ccCCc------ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcc
Q 042831          505 HAKGS------QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL  578 (645)
Q Consensus       505 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l  578 (645)
                      .....      ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+........ 
T Consensus       162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~-  240 (330)
T 2izr_A          162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP-  240 (330)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSC-
T ss_pred             cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCC-
Confidence            33221      12456799999999999999999999999999999999999999987654433333322211110000 


Q ss_pred             ccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          579 LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       579 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                          .+.++...     ..+.+++..|++.||.+||+++++++.|+
T Consensus       241 ----~~~~~~~~-----p~~~~li~~~l~~~p~~RP~~~~l~~~l~  277 (330)
T 2izr_A          241 ----IEVLCENF-----PEMATYLRYVRRLDFFEKPDYDYLRKLFT  277 (330)
T ss_dssp             ----HHHHTTTC-----HHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred             ----HHHHhccC-----hHHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence                01111111     16778889999999999999999999885

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=4.5e-42  Score=360.28  Aligned_cols=255  Identities=27%  Similarity=0.463  Sum_probs=204.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeE----EEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSY----IAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~----vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ++|...+.||+|+||.||+|++..+++.    ||+|.+.... ....+.+.+|+.++.+++||||++++++|. ++..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            5678889999999999999999877764    7888775432 334456788999999999999999999986 466899


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++|+|.+++......+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus        92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  168 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD  168 (325)
T ss_dssp             EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred             EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence            999999999999997766789999999999999999999999   89999999999999999999999999999876543


Q ss_pred             CCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          507 KGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       507 ~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      ... ......++..|+|||++.++.++.++|||||||++|||++ |+.||.......   +.+    ....+....  .+
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~----~~~~~~~~~--~~  239 (325)
T 3kex_A          169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPD----LLEKGERLA--QP  239 (325)
T ss_dssp             TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHH----HHHTTCBCC--CC
T ss_pred             cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHH----HHHcCCCCC--CC
Confidence            322 2344567889999999999999999999999999999999 999998654332   111    122221111  11


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..       ....+..++.+||+.||++|||++|++++|+.-
T Consensus       240 ~~-------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~  274 (325)
T 3kex_A          240 QI-------CTIDVYMVMVKCWMIDENIRPTFKELANEFTRM  274 (325)
T ss_dssp             TT-------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHH
T ss_pred             Cc-------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            11       112356788999999999999999999999753

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=7.5e-42  Score=350.72  Aligned_cols=257  Identities=25%  Similarity=0.367  Sum_probs=198.9

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCC---CeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRET---NSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~---~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~  424 (645)
                      ...++|...+.||+|+||.||+|.+..+   +..||+|.+... .....+.+.+|+.++.+++||||+++++++. ++..
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~   90 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV   90 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence            3456788899999999999999998643   567999998754 3445678999999999999999999999984 5678


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++||||+++++|.+++......+++..++.++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++...
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  167 (281)
T 1mp8_A           91 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME  167 (281)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccC
Confidence            99999999999999998777789999999999999999999999   899999999999999999999999999998765


Q ss_pred             ccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          505 HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       505 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ...........+++.|+|||.+....++.++||||||+++|||++ |+.||......+   ....    ...+..     
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~~~~----i~~~~~-----  235 (281)
T 1mp8_A          168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIGR----IENGER-----  235 (281)
T ss_dssp             -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHH----HHTTCC-----
T ss_pred             cccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---HHHH----HHcCCC-----
Confidence            443333344557789999999998899999999999999999996 999997544321   2221    112211     


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..+....    ...+.+++..||+.||++|||+.|+++.|+.
T Consensus       236 ~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  273 (281)
T 1mp8_A          236 LPMPPNC----PPTLYSLMTKCWAYDPSRRPRFTELKAQLST  273 (281)
T ss_dssp             CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            1111222    2456788899999999999999999999864

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=7.8e-42  Score=357.54  Aligned_cols=250  Identities=27%  Similarity=0.376  Sum_probs=210.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|+||.||+++...+|+.||+|++....   ....+.+.+|+.++..++||||+++++++.+.+..++||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            57888999999999999999999999999999986542   234567889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....   
T Consensus        86 e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~---  158 (318)
T 1fot_A           86 DYIEGGELFSLLRK-SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD---  158 (318)
T ss_dssp             CCCCSCBHHHHHHH-TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSS---
T ss_pred             eCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCC---
Confidence            99999999999865 3568999999999999999999998   8999999999999999999999999999986532   


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                       ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   .....   ... ++..      .+..
T Consensus       159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~---~i~-~~~~------~~p~  224 (318)
T 1fot_A          159 -VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT---MKTYE---KIL-NAEL------RFPP  224 (318)
T ss_dssp             -CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHH---HHH-HCCC------CCCT
T ss_pred             -ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---HHHHH---HHH-hCCC------CCCC
Confidence             23346799999999999999999999999999999999999999975332   11111   111 1111      1111


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~  626 (645)
                      .+    ...+.+++.+||+.||++||     +++|+++|.++.
T Consensus       225 ~~----~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~  263 (318)
T 1fot_A          225 FF----NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFK  263 (318)
T ss_dssp             TS----CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGS
T ss_pred             CC----CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCcccc
Confidence            22    24567788999999999999     999999999975

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2.5e-41  Score=348.19  Aligned_cols=266  Identities=25%  Similarity=0.324  Sum_probs=206.1

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh--hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK--QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ++|...+.||+|+||.||+|++ .+++.||+|++.....  ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence            4688889999999999999998 5688999999865432  234678899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+++ +|.+++......+++..+..++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+++...... .
T Consensus        81 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~  155 (288)
T 1ob3_A           81 HLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-R  155 (288)
T ss_dssp             CCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred             ecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccc-c
Confidence            9975 8999887766789999999999999999999999   899999999999999999999999999998654322 2


Q ss_pred             ceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccc--------c
Q 042831          510 QTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL--------E  580 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~--------~  580 (645)
                      ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......   .....+..........        .
T Consensus       156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  232 (288)
T 1ob3_A          156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA---DQLMRIFRILGTPNSKNWPNVTELP  232 (288)
T ss_dssp             ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHHCCCChhhchhhhccc
Confidence            23345689999999998764 5899999999999999999999999754321   2222222222111000        0


Q ss_pred             ccCccccC-------CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          581 AVDPRLCR-------DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       581 ~~d~~l~~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..++.+..       .+.......+.+++.+||+.||++|||++|+++|.++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~  285 (288)
T 1ob3_A          233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK  285 (288)
T ss_dssp             TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGG
T ss_pred             ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchh
Confidence            01111100       00011234567888999999999999999999999875

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=8.9e-42  Score=359.98  Aligned_cols=263  Identities=27%  Similarity=0.411  Sum_probs=214.9

Q ss_pred             HHHHHhhcCCCCCCccCcCCcEEEEEEEEc-----CCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeee
Q 042831          345 KELALATNDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWC  418 (645)
Q Consensus       345 ~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~  418 (645)
                      .++....++|...+.||+|+||.||+|++.     .+++.||||.+... .....+.+.+|+.++.+++||||++++++|
T Consensus        40 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  119 (343)
T 1luf_A           40 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC  119 (343)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            344556688999999999999999999997     34589999999765 344567899999999999999999999999


Q ss_pred             eeCCeEEEEEEecCCCChhhhhhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCee
Q 042831          419 HEKKELLLVYEFMPNGSLDSHLFKEN-----------------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVV  475 (645)
Q Consensus       419 ~~~~~~~lV~Ey~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv  475 (645)
                      .+.+..++||||+++|+|.+++....                       ..+++..++.++.||++||.|||+   .+|+
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~iv  196 (343)
T 1luf_A          120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFV  196 (343)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCC
T ss_pred             ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCee
Confidence            99999999999999999999997532                       568999999999999999999999   8999


Q ss_pred             eccCCCCCeEECCCCcEEEeeccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCC
Q 042831          476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKP  553 (645)
Q Consensus       476 H~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~p  553 (645)
                      ||||||+|||++.++.+||+|||+++....... .......+++.|+|||++.+..++.++||||||+++|||++ |+.|
T Consensus       197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p  276 (343)
T 1luf_A          197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP  276 (343)
T ss_dssp             CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             cCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCc
Confidence            999999999999999999999999986543322 22334567899999999999999999999999999999999 9999


Q ss_pred             CCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       554 f~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      |......   .    ......++....     ....+    ...+.+++..||+.||++||++.+++++|+.-
T Consensus       277 ~~~~~~~---~----~~~~~~~~~~~~-----~~~~~----~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~  333 (343)
T 1luf_A          277 YYGMAHE---E----VIYYVRDGNILA-----CPENC----PLELYNLMRLCWSKLPADRPSFCSIHRILQRM  333 (343)
T ss_dssp             TTTSCHH---H----HHHHHHTTCCCC-----CCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             CCCCChH---H----HHHHHhCCCcCC-----CCCCC----CHHHHHHHHHHcccCcccCCCHHHHHHHHHHH
Confidence            9754321   1    112222332211     11122    24677888999999999999999999999864

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=7.6e-41  Score=345.55  Aligned_cols=260  Identities=17%  Similarity=0.239  Sum_probs=213.3

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .++|...+.||+|+||.||+|.+..+++.||||++....  ..+.+.+|+.++.++ +|+|++++++++......++|||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            467889999999999999999998899999999986543  234678899999999 79999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc-----EEEeeccCccccc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN-----AKIGDFGLARLVE  504 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~-----~kl~DfGla~~~~  504 (645)
                      |+ +++|.+++...+..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.     +||+|||+++...
T Consensus        87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~  162 (298)
T 1csn_A           87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  162 (298)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence            99 999999998777779999999999999999999998   89999999999999987776     9999999998765


Q ss_pred             ccCCc------ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcc
Q 042831          505 HAKGS------QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL  578 (645)
Q Consensus       505 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l  578 (645)
                      .....      ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+.........
T Consensus       163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  242 (298)
T 1csn_A          163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL  242 (298)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred             cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH
Confidence            43221      234467999999999999999999999999999999999999999875544333333222211111111


Q ss_pred             ccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          579 LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       579 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                           +.+...+    .+.+.+++..||+.||++||+++++++.|+.
T Consensus       243 -----~~~~~~~----~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~  280 (298)
T 1csn_A          243 -----RELCAGF----PEEFYKYMHYARNLAFDATPDYDYLQGLFSK  280 (298)
T ss_dssp             -----HHHTTTS----CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred             -----HHHHhhC----cHHHHHHHHHHhcCCcccCCCHHHHHHHHHH
Confidence                 1111222    2467788899999999999999999999874

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.5e-41  Score=361.81  Aligned_cols=259  Identities=22%  Similarity=0.309  Sum_probs=212.0

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ...++|...+.||+|+||.||+|.+..+++.||+|++...  .....+.+.+|+.++.+++||||+++++++.+++..++
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l  105 (362)
T 2bdw_A           26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL  105 (362)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            3456799999999999999999999999999999999754  34456788999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC---cEEEeeccCcccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF---NAKIGDFGLARLV  503 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~---~~kl~DfGla~~~  503 (645)
                      ||||+++|+|.+++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++   .+||+|||+++..
T Consensus       106 v~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~  181 (362)
T 2bdw_A          106 VFDLVTGGELFEDIVA-REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV  181 (362)
T ss_dssp             EECCCCSCBHHHHHTT-CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred             EEecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence            9999999999998864 3568999999999999999999999   8999999999999998654   5999999999866


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ...  .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..+..    ....+.... ..
T Consensus       182 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~---~~~~~----~i~~~~~~~-~~  251 (362)
T 2bdw_A          182 NDS--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ---HRLYA----QIKAGAYDY-PS  251 (362)
T ss_dssp             TTC--CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHH----HHHHTCCCC-CT
T ss_pred             cCC--cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHH----HHHhCCCCC-Cc
Confidence            432  223346799999999999998999999999999999999999999975332   12221    122221110 00


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      +. ...    ....+.+++.+||+.||++|||+.|++++.|..
T Consensus       252 ~~-~~~----~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  289 (362)
T 2bdw_A          252 PE-WDT----VTPEAKSLIDSMLTVNPKKRITADQALKVPWIC  289 (362)
T ss_dssp             TG-GGG----SCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHH
T ss_pred             cc-ccC----CCHHHHHHHHHHcCCChhhCcCHHHHhcCcccC
Confidence            10 011    124567888999999999999999999998763

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=5.7e-42  Score=362.49  Aligned_cols=257  Identities=25%  Similarity=0.368  Sum_probs=211.5

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCe
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKE  423 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~  423 (645)
                      ....++|...+.||+|+||.||+|+++.+|+.||||+++...   ....+.+..|..++.++ +||||+++++++.+.+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            345678999999999999999999999999999999997542   23456778899999887 89999999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      .++||||+++|+|.+++... ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus        93 ~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  168 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKEN  168 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence            99999999999999998653 468999999999999999999999   89999999999999999999999999999754


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..+..    ....+.      
T Consensus       169 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~~~~~----~i~~~~------  234 (345)
T 1xjd_A          169 MLG-DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE---EELFH----SIRMDN------  234 (345)
T ss_dssp             CCT-TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHH----HHHHCC------
T ss_pred             ccC-CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH---HHHHH----HHHhCC------
Confidence            322 2234456899999999999999999999999999999999999999975432   11221    111111      


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHhccC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIR-QVIHVLNFE  626 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~~L~~~  626 (645)
                      +.+....    ...+..++.+||+.||++||++. ++++|.++.
T Consensus       235 ~~~p~~~----s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~  274 (345)
T 1xjd_A          235 PFYPRWL----EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFR  274 (345)
T ss_dssp             CCCCTTS----CHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGT
T ss_pred             CCCCccc----CHHHHHHHHHHhcCCHhHcCCChHHHHcCcccc
Confidence            1111112    24567788999999999999998 999998875

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=2.5e-41  Score=354.84  Aligned_cols=257  Identities=21%  Similarity=0.254  Sum_probs=188.3

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeEEEEEEecCCCC
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLLVYEFMPNGS  435 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~~lV~Ey~~~gs  435 (645)
                      .++||+|+||.||+|.+..+++.||||++...   ....+.+|+.++.+++ ||||+++++++.+++..++||||+++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            47899999999999999999999999998643   3457788999999997 9999999999999999999999999999


Q ss_pred             hhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC---cEEEeeccCcccccccCCccee
Q 042831          436 LDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF---NAKIGDFGLARLVEHAKGSQTT  512 (645)
Q Consensus       436 L~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~---~~kl~DfGla~~~~~~~~~~~~  512 (645)
                      |.+++... ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++   .+||+|||+++...... ....
T Consensus        93 L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~  167 (325)
T 3kn6_A           93 LFERIKKK-KHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLK  167 (325)
T ss_dssp             HHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred             HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-Cccc
Confidence            99999654 579999999999999999999998   8999999999999997655   89999999998654322 2234


Q ss_pred             ecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCH
Q 042831          513 VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDG  592 (645)
Q Consensus       513 ~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~  592 (645)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||.....................+....  +....    .
T Consensus       168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~----~  241 (325)
T 3kn6_A          168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF--EGEAW----K  241 (325)
T ss_dssp             ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCC--CSHHH----H
T ss_pred             ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCC--Ccccc----c
Confidence            45689999999999999999999999999999999999999986543221111122222333332210  00000    1


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          593 QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       593 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      .....+.+++..||+.||++|||++|++++.|+..
T Consensus       242 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~  276 (325)
T 3kn6_A          242 NVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD  276 (325)
T ss_dssp             TSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCT
T ss_pred             CCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhcc
Confidence            12356778889999999999999999999999764

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=2.3e-41  Score=360.38  Aligned_cols=262  Identities=22%  Similarity=0.248  Sum_probs=201.6

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ..++|...+.||+|+||.||++++..+++.||||++.... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            3467899999999999999999999999999999997543 233678899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc--EEEeeccCcccccccC
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN--AKIGDFGLARLVEHAK  507 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~--~kl~DfGla~~~~~~~  507 (645)
                      |+++|+|.+++... ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.  +||+|||+++..... 
T Consensus        97 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~-  171 (361)
T 3uc3_A           97 YASGGELYERICNA-GRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-  171 (361)
T ss_dssp             CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred             eCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc-
Confidence            99999999998654 468999999999999999999998   99999999999999987765  999999999743322 


Q ss_pred             CcceeecccCccccCccccccCCCCcc-hhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKE-SDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~-sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                       .......||+.|+|||++.+..++.+ +|||||||++|||++|+.||.........  ........ .....  +... 
T Consensus       172 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~--~~~~~~~~-~~~~~--~~~~-  244 (361)
T 3uc3_A          172 -SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY--RKTIQRIL-SVKYS--IPDD-  244 (361)
T ss_dssp             ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH--HHHHHHHH-TTCCC--CCTT-
T ss_pred             -CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH--HHHHHHHh-cCCCC--CCCc-
Confidence             22334579999999999988877655 89999999999999999999865433221  11111111 11110  0000 


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPL  629 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~  629 (645)
                       ..    ....+.+++.+||+.||++|||++|+++|.|+...+
T Consensus       245 -~~----~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~  282 (361)
T 3uc3_A          245 -IR----ISPECCHLISRIFVADPATRISIPEIKTHSWFLKNL  282 (361)
T ss_dssp             -SC----CCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTC
T ss_pred             -CC----CCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcCC
Confidence             01    124567888999999999999999999999985443

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=3.1e-41  Score=368.51  Aligned_cols=259  Identities=20%  Similarity=0.253  Sum_probs=211.0

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ..++|...++||+|+||.||++.+..+|+.+|+|++....  ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            3467888999999999999999999999999999987543  34566789999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC---CCCcEEEeeccCccccc
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD---SNFNAKIGDFGLARLVE  504 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld---~~~~~kl~DfGla~~~~  504 (645)
                      |||+++|+|.+.+... ..+++..+..++.||+.||.|||+   ++|+||||||+|||++   .++.+||+|||+++...
T Consensus        89 ~E~~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~  164 (444)
T 3soa_A           89 FDLVTGGELFEDIVAR-EYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE  164 (444)
T ss_dssp             ECCCBCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred             EEeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence            9999999999988654 569999999999999999999999   8999999999999998   56789999999997664


Q ss_pred             ccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          505 HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       505 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      ... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..+..    ....+... ...+
T Consensus       165 ~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~---~~~~~----~i~~~~~~-~~~~  235 (444)
T 3soa_A          165 GEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ---HRLYQ----QIKAGAYD-FPSP  235 (444)
T ss_dssp             TTC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHH----HHHHTCCC-CCTT
T ss_pred             CCC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH---HHHHH----HHHhCCCC-CCcc
Confidence            322 223446799999999999998999999999999999999999999975332   12222    12222211 0011


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      . ....    ...+.+++..||+.||++|||+.|+++|.|..
T Consensus       236 ~-~~~~----s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~  272 (444)
T 3soa_A          236 E-WDTV----TPEAKDLINKMLTINPSKRITAAEALKHPWIS  272 (444)
T ss_dssp             T-TTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTH
T ss_pred             c-cccC----CHHHHHHHHHHcCCChhHCCCHHHHhcCcccc
Confidence            1 1112    24567888999999999999999999999863

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=5.2e-42  Score=363.95  Aligned_cols=258  Identities=23%  Similarity=0.308  Sum_probs=209.6

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-----hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-----KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      .++|...+.||+|+||.||+|++..+++.||||++....     ....+.+.+|+.++.+++||||+++++++.+++..+
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            356888999999999999999999999999999985321     224578999999999999999999999999999999


Q ss_pred             EEEEecCCCChhhhhhhc---CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc---EEEeeccC
Q 042831          426 LVYEFMPNGSLDSHLFKE---NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN---AKIGDFGL  499 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~---~kl~DfGl  499 (645)
                      +||||+++++|.+++.+.   +..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.   +||+|||+
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            999999999998887642   3468999999999999999999999   89999999999999986655   99999999


Q ss_pred             cccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccc
Q 042831          500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL  579 (645)
Q Consensus       500 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~  579 (645)
                      ++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....    ..+.    .....+...
T Consensus       180 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~----~~i~~~~~~  250 (351)
T 3c0i_A          180 AIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----ERLF----EGIIKGKYK  250 (351)
T ss_dssp             CEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH----HHHH----HHHHHTCCC
T ss_pred             eeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH----HHHH----HHHHcCCCC
Confidence            98664322 22344579999999999999899999999999999999999999997532    1111    111112111


Q ss_pred             cccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       580 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                        .++......    ...+.+++.+||+.||++|||+.|+++|.|+.
T Consensus       251 --~~~~~~~~~----s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~  291 (351)
T 3c0i_A          251 --MNPRQWSHI----SESAKDLVRRMLMLDPAERITVYEALNHPWLK  291 (351)
T ss_dssp             --CCHHHHTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             --CCccccccC----CHHHHHHHHHHCCCChhHCcCHHHHhcChhhc
Confidence              111111112    24577888999999999999999999998764

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=3.7e-41  Score=351.28  Aligned_cols=268  Identities=22%  Similarity=0.271  Sum_probs=205.8

Q ss_pred             cCCCC-CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFND-DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~-~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      +.|.. .+.||+|+||.||+|++..+++.||||++........+.+.+|++++.++ +||||+++++++.+++..++|||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            45666 47899999999999999989999999999876666677899999999995 79999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc---EEEeeccCccccccc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN---AKIGDFGLARLVEHA  506 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~---~kl~DfGla~~~~~~  506 (645)
                      |+++|+|.+++... ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.   +||+|||+++.....
T Consensus        92 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~  167 (316)
T 2ac3_A           92 KMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN  167 (316)
T ss_dssp             CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred             cCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence            99999999999654 468999999999999999999999   89999999999999998776   999999998765422


Q ss_pred             CC------cceeecccCccccCcccccc-----CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCch--------hHHH
Q 042831          507 KG------SQTTVLAGTMGYMAPECATT-----GKASKESDVYSFGIVALEIACGRKPINPKAPQGQV--------SLLQ  567 (645)
Q Consensus       507 ~~------~~~~~~~gt~~y~aPE~~~~-----~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~--------~l~~  567 (645)
                      ..      .......||+.|+|||++..     ..++.++|||||||++|||++|+.||......+..        ....
T Consensus       168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  247 (316)
T 2ac3_A          168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN  247 (316)
T ss_dssp             --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred             CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence            11      11223569999999999875     45789999999999999999999999865433210        0011


Q ss_pred             HHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCC
Q 042831          568 WVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPL  629 (645)
Q Consensus       568 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~  629 (645)
                      .......++...  .........    ...+.+++.+||+.||++|||++|+++|.++....
T Consensus       248 ~~~~~i~~~~~~--~~~~~~~~~----~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          248 MLFESIQEGKYE--FPDKDWAHI----SCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             HHHHHHHHCCCC--CCHHHHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred             HHHHHHhccCcc--cCchhcccC----CHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence            111222222110  000000111    24577889999999999999999999999987543

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=5.6e-41  Score=345.01  Aligned_cols=254  Identities=31%  Similarity=0.544  Sum_probs=206.1

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChh-------hHHHHHHHHHHHHhcCCCCccEEEeeeeeCC
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ-------GIKEYASEVKIISRLRHRNLVQLLGWCHEKK  422 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~-------~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~  422 (645)
                      ..++|...+.||+|+||.||+|++..+++.||+|++......       ..+.+.+|++++.+++||||+++++++.+..
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   96 (287)
T 4f0f_A           17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP   96 (287)
T ss_dssp             CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred             hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence            346788899999999999999999999999999998654221       1267899999999999999999999997665


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCC--eeeccCCCCCeEECCCCc-----EEEe
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC--VVHRDIKSSNIMLDSNFN-----AKIG  495 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dlkp~NILld~~~~-----~kl~  495 (645)
                        ++||||+++|+|.+++.+....+++..++.++.|++.||.|||+   .+  |+||||||+|||++.++.     +||+
T Consensus        97 --~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~  171 (287)
T 4f0f_A           97 --RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKVA  171 (287)
T ss_dssp             --EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred             --eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence              69999999999999998777789999999999999999999998   78  999999999999988776     9999


Q ss_pred             eccCcccccccCCcceeecccCccccCccccc--cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHh
Q 042831          496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECAT--TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY  573 (645)
Q Consensus       496 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~  573 (645)
                      |||+++....    ......||+.|+|||++.  ...++.++|||||||++|||++|+.||........ ......   .
T Consensus       172 Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~---~  243 (287)
T 4f0f_A          172 DFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFINMI---R  243 (287)
T ss_dssp             CCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH-HHHHHH---H
T ss_pred             CCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH-HHHHHH---h
Confidence            9999974322    334467999999999984  44578999999999999999999999975543321 111111   1


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..+     ..+.+...+    ...+.+++..||+.||++|||++|+++.|+.
T Consensus       244 ~~~-----~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          244 EEG-----LRPTIPEDC----PPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             HSC-----CCCCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             ccC-----CCCCCCccc----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            111     111222222    3467788899999999999999999999863

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.1e-41  Score=363.50  Aligned_cols=258  Identities=26%  Similarity=0.418  Sum_probs=211.6

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcC-------CCeEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeeee
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRE-------TNSYIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCH  419 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~-------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~  419 (645)
                      ...++|...++||+|+||.||+|.+..       .+..||||++... .....+++.+|++++.++ +||||++++++|.
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~  145 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT  145 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence            345678889999999999999999753       2368999999765 345567899999999999 8999999999999


Q ss_pred             eCCeEEEEEEecCCCChhhhhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCe
Q 042831          420 EKKELLLVYEFMPNGSLDSHLFKEN---------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI  484 (645)
Q Consensus       420 ~~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NI  484 (645)
                      .++..++||||+++|+|.+++....               ..+++..++.|+.||+.||.|||+   .+|+||||||+||
T Consensus       146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NI  222 (382)
T 3tt0_A          146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNV  222 (382)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGE
T ss_pred             cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceE
Confidence            9999999999999999999997543               359999999999999999999999   8999999999999


Q ss_pred             EECCCCcEEEeeccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCc
Q 042831          485 MLDSNFNAKIGDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQ  562 (645)
Q Consensus       485 Lld~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~  562 (645)
                      |++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......  
T Consensus       223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~--  300 (382)
T 3tt0_A          223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--  300 (382)
T ss_dssp             EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred             EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--
Confidence            999999999999999986654322 22333567889999999999999999999999999999999 99999754321  


Q ss_pred             hhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          563 VSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       563 ~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                       .    +.....++...     .....+    ...+.+++.+||+.||++|||++|++++|+.
T Consensus       301 -~----~~~~~~~~~~~-----~~~~~~----~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  349 (382)
T 3tt0_A          301 -E----LFKLLKEGHRM-----DKPSNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  349 (382)
T ss_dssp             -H----HHHHHHTTCCC-----CCCSSC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -H----HHHHHHcCCCC-----CCCccC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence             1    22222222211     111122    2467788899999999999999999999974

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=9.8e-41  Score=347.27  Aligned_cols=271  Identities=23%  Similarity=0.301  Sum_probs=206.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ++|...++||+|+||.||+|.+..+|+.||+|++....  ....+.+.+|++++.+++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            57888999999999999999999999999999986543  3345678899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+++++|.+++.. ...+++..+..++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||+++...... .
T Consensus        83 ~~~~~~l~~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~  157 (311)
T 4agu_A           83 YCDHTVLHELDRY-QRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS-D  157 (311)
T ss_dssp             CCSEEHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             eCCCchHHHHHhh-hcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-c
Confidence            9999999887743 4568999999999999999999999   899999999999999999999999999998654322 2


Q ss_pred             ceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHH--------HHHhcCCcccc
Q 042831          510 QTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWV--------WDLYGNGKLLE  580 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~--------~~~~~~~~l~~  580 (645)
                      ......||..|+|||++.+ ..++.++||||||+++|||++|+.||......+....+...        ...+.......
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (311)
T 4agu_A          158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS  237 (311)
T ss_dssp             --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred             ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccc
Confidence            2334578999999999876 56899999999999999999999999765432221111100        00111111000


Q ss_pred             ---ccCccccCCC---CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          581 ---AVDPRLCRDF---DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       581 ---~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                         ..++.-....   .......+.+++..||+.||++|||++|+++|.++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  290 (311)
T 4agu_A          238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFEN  290 (311)
T ss_dssp             TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTT
T ss_pred             cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHh
Confidence               0011000000   0012245778899999999999999999999999864

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=1.2e-40  Score=344.45  Aligned_cols=263  Identities=25%  Similarity=0.345  Sum_probs=203.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHh--cCCCCccEEEeeeee----CCeE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISR--LRHRNLVQLLGWCHE----KKEL  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nlv~l~~~~~~----~~~~  424 (645)
                      .++|...+.||+|+||.||+|++  +++.||||++...   ..+.+..|.+++..  ++||||+++++++..    ....
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~   81 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL   81 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence            46788999999999999999988  4789999998643   34556677777776  789999999998754    3468


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhc-----CCCeeeccCCCCCeEECCCCcEEEeeccC
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW-----EQCVVHRDIKSSNIMLDSNFNAKIGDFGL  499 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~Dlkp~NILld~~~~~kl~DfGl  499 (645)
                      ++||||+++|+|.+++.  ...+++..++.++.||+.||.|||...     +++|+||||||+|||++.++.+||+|||+
T Consensus        82 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  159 (301)
T 3q4u_A           82 WLITHYHEMGSLYDYLQ--LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL  159 (301)
T ss_dssp             EEEECCCTTCBHHHHHT--TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEehhhccCCCHHHHHh--hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCC
Confidence            99999999999999994  356999999999999999999999211     28999999999999999999999999999


Q ss_pred             cccccccCCcc---eeecccCccccCccccccC------CCCcchhHHHHHHHHHHHHcC----------CCCCCCCCCC
Q 042831          500 ARLVEHAKGSQ---TTVLAGTMGYMAPECATTG------KASKESDVYSFGIVALEIACG----------RKPINPKAPQ  560 (645)
Q Consensus       500 a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~t~~sDV~SfGvll~elltG----------~~pf~~~~~~  560 (645)
                      ++.........   .....||+.|+|||++.+.      .++.++|||||||++|||++|          +.||......
T Consensus       160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~  239 (301)
T 3q4u_A          160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN  239 (301)
T ss_dssp             CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence            98655433221   2234799999999999876      455799999999999999999          8888654433


Q ss_pred             CchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          561 GQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       561 ~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ...  ................+.+   ..........+.+++.+||+.||++|||++|+++.|+.
T Consensus       240 ~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  299 (301)
T 3q4u_A          240 DPS--FEDMRKVVCVDQQRPNIPN---RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK  299 (301)
T ss_dssp             SCC--HHHHHHHHTTSCCCCCCCG---GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             Ccc--hhhhhHHHhccCCCCCCCh---hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence            221  1111121111111111111   11223466788999999999999999999999999863

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1e-41  Score=357.17  Aligned_cols=254  Identities=23%  Similarity=0.326  Sum_probs=203.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC--------
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK--------  422 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~--------  422 (645)
                      ++|...+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|++++++++||||++++++|.+..        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            56888999999999999999999899999999997543 345678999999999999999999999986543        


Q ss_pred             -------------------------------------------------eEEEEEEecCCCChhhhhhhcC--CCCCHHH
Q 042831          423 -------------------------------------------------ELLLVYEFMPNGSLDSHLFKEN--SLLTWEF  451 (645)
Q Consensus       423 -------------------------------------------------~~~lV~Ey~~~gsL~~~l~~~~--~~l~~~~  451 (645)
                                                                       ..++||||+++++|.+++....  ...++..
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  165 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV  165 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence                                                             3899999999999999997643  3467778


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC-----------cceeecccCccc
Q 042831          452 RYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-----------SQTTVLAGTMGY  520 (645)
Q Consensus       452 ~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~-----------~~~~~~~gt~~y  520 (645)
                      ++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.......           .......||+.|
T Consensus       166 ~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  242 (332)
T 3qd2_B          166 CLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY  242 (332)
T ss_dssp             HHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred             HHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence            99999999999999998   8999999999999999999999999999987654321           122335699999


Q ss_pred             cCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHH
Q 042831          521 MAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMI  600 (645)
Q Consensus       521 ~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~  600 (645)
                      +|||++.+..++.++|||||||++|||++|..|+..        ... .......+...     .    ........+.+
T Consensus       243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--------~~~-~~~~~~~~~~~-----~----~~~~~~~~~~~  304 (332)
T 3qd2_B          243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--------RVR-IITDVRNLKFP-----L----LFTQKYPQEHM  304 (332)
T ss_dssp             SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--------HHH-HHHHHHTTCCC-----H----HHHHHCHHHHH
T ss_pred             cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--------HHH-HHHHhhccCCC-----c----ccccCChhHHH
Confidence            999999999999999999999999999998776421        111 11111111110     0    01123345678


Q ss_pred             HHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          601 VGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       601 l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ++.+||+.||++|||++|++++.+++
T Consensus       305 li~~~l~~~p~~Rps~~~~l~~~~f~  330 (332)
T 3qd2_B          305 MVQDMLSPSPTERPEATDIIENAIFE  330 (332)
T ss_dssp             HHHHHHCSSGGGSCCHHHHHHSTTCC
T ss_pred             HHHHHccCCCCcCCCHHHHhhchhhh
Confidence            89999999999999999999998875

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.5e-41  Score=360.19  Aligned_cols=250  Identities=24%  Similarity=0.329  Sum_probs=211.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|+||.||++++..+|+.||+|++....   ....+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            57888999999999999999999999999999986532   234567889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++|+|.+++.+. ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....  
T Consensus       121 e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~--  194 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--  194 (350)
T ss_dssp             ECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred             cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence            999999999999654 458999999999999999999998   99999999999999999999999999999865432  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                        .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..+.    ..+..+..      .+..
T Consensus       195 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~~~~----~~i~~~~~------~~p~  259 (350)
T 1rdq_E          195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIY----EKIVSGKV------RFPS  259 (350)
T ss_dssp             --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHH----HHHHHCCC------CCCT
T ss_pred             --cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH---HHHH----HHHHcCCC------CCCC
Confidence              2345799999999999999999999999999999999999999975432   1111    11222221      1111


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPS-----IRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~~  626 (645)
                      .+    ...+..++.+||+.||++||+     ++|+++|.++.
T Consensus       260 ~~----~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~  298 (350)
T 1rdq_E          260 HF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA  298 (350)
T ss_dssp             TC----CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGT
T ss_pred             CC----CHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcC
Confidence            22    245678889999999999998     99999999875

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=1.9e-41  Score=352.69  Aligned_cols=259  Identities=27%  Similarity=0.400  Sum_probs=211.7

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEc-----CCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK  421 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~  421 (645)
                      ....++|...+.||+|+||.||+|.+.     .+++.||+|.+... .....+.+.+|++++.+++||||+++++++.+.
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   98 (314)
T 2ivs_A           19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD   98 (314)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence            344567888999999999999999873     44589999999754 345567899999999999999999999999999


Q ss_pred             CeEEEEEEecCCCChhhhhhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeecc
Q 042831          422 KELLLVYEFMPNGSLDSHLFKEN-----------------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD  478 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~D  478 (645)
                      +..++||||+++++|.+++....                       ..+++..++.++.||++||.|||+   .+|+|||
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~d  175 (314)
T 2ivs_A           99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRD  175 (314)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCC
T ss_pred             CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccc
Confidence            99999999999999999997543                       248999999999999999999999   8999999


Q ss_pred             CCCCCeEECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCC
Q 042831          479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINP  556 (645)
Q Consensus       479 lkp~NILld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~  556 (645)
                      |||+||+++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||..
T Consensus       176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  255 (314)
T 2ivs_A          176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG  255 (314)
T ss_dssp             CSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             cchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            9999999999999999999999866433221 2233457788999999998889999999999999999999 9999976


Q ss_pred             CCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          557 KAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       557 ~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .....   +..    ....+..     +.....    ....+.+++.+||+.||++||++.|++++|+.
T Consensus       256 ~~~~~---~~~----~~~~~~~-----~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~  308 (314)
T 2ivs_A          256 IPPER---LFN----LLKTGHR-----MERPDN----CSEEMYRLMLQCWKQEPDKRPVFADISKDLEK  308 (314)
T ss_dssp             CCGGG---HHH----HHHTTCC-----CCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCHHH---HHH----HhhcCCc-----CCCCcc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            54321   111    1222211     111112    23467788899999999999999999999874

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=5.8e-41  Score=355.59  Aligned_cols=259  Identities=23%  Similarity=0.322  Sum_probs=197.3

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ..++|...+.||+|+||.||+|++..+++.||||++....  ..+.+.+|++++.+++||||++++++|...+..++|||
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            4567888999999999999999999999999999987543  34568899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC---CCcEEEeeccCccccccc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~---~~~~kl~DfGla~~~~~~  506 (645)
                      |+++|+|.+++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.   ++.+||+|||+++.....
T Consensus       129 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~  204 (349)
T 2w4o_A          129 LVTGGELFDRIVE-KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ  204 (349)
T ss_dssp             CCCSCBHHHHHTT-CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred             eCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence            9999999998864 3568999999999999999999999   89999999999999975   889999999999865432


Q ss_pred             CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                        .......||+.|+|||++.+..++.++|||||||++|||++|+.||......  .    .......++... ... ..
T Consensus       205 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~----~~~~~i~~~~~~-~~~-~~  274 (349)
T 2w4o_A          205 --VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD--Q----FMFRRILNCEYY-FIS-PW  274 (349)
T ss_dssp             ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH--H----HHHHHHHTTCCC-CCT-TT
T ss_pred             --cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc--H----HHHHHHHhCCCc-cCC-ch
Confidence              2233457899999999999999999999999999999999999999754322  1    111112122111 011 11


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      ...    ....+.+++.+||+.||++|||+.|++++.++...
T Consensus       275 ~~~----~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  312 (349)
T 2w4o_A          275 WDE----VSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGK  312 (349)
T ss_dssp             TTT----SCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTST
T ss_pred             hhh----CCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence            112    23457788899999999999999999999998643

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=7.6e-42  Score=375.29  Aligned_cols=261  Identities=26%  Similarity=0.457  Sum_probs=212.0

Q ss_pred             hHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe
Q 042831          344 YKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE  423 (645)
Q Consensus       344 ~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~  423 (645)
                      ..++....++|...++||+|+||.||+|.+.. +..||||+++... ...++|.+|++++++++||||+++++++. .+.
T Consensus       180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~  256 (454)
T 1qcf_A          180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEP  256 (454)
T ss_dssp             TTCSBCCGGGEEEEEEEECCSSEEEEEEEETT-TEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS
T ss_pred             ccceeechHHeEEEEEcccCCceEEEEEEECC-ccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCc
Confidence            34555667788999999999999999999864 6789999997643 34678999999999999999999999986 567


Q ss_pred             EEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      .++|||||++|+|.+++... ...+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.
T Consensus       257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~  333 (454)
T 1qcf_A          257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARV  333 (454)
T ss_dssp             CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGG
T ss_pred             cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceE
Confidence            89999999999999999754 3468999999999999999999999   8999999999999999999999999999987


Q ss_pred             ccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccc
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA  581 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~  581 (645)
                      .............++..|+|||++..+.++.++|||||||+||||++ |+.||......   .+...    ...+...  
T Consensus       334 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~---~~~~~----i~~~~~~--  404 (454)
T 1qcf_A          334 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRA----LERGYRM--  404 (454)
T ss_dssp             BCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHHH----HHHTCCC--
T ss_pred             cCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH---HHHHH----HHcCCCC--
Confidence            64322222233446788999999999999999999999999999999 99999754321   22221    1112110  


Q ss_pred             cCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       582 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..+   .    .....+.+++.+||+.||++|||++++++.|+.-
T Consensus       405 ~~~---~----~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~  442 (454)
T 1qcf_A          405 PRP---E----NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF  442 (454)
T ss_dssp             CCC---T----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCC---C----CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            011   1    1234677888999999999999999999999854

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=1.7e-41  Score=356.65  Aligned_cols=263  Identities=26%  Similarity=0.380  Sum_probs=213.2

Q ss_pred             HHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCe-----EEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCCccEEEee
Q 042831          345 KELALATNDFNDDQKLGQGGFGGVYKGFFRETNS-----YIAVKRVSQGS-KQGIKEYASEVKIISRL-RHRNLVQLLGW  417 (645)
Q Consensus       345 ~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~-----~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~  417 (645)
                      +++....++|...+.||+|+||.||+|.+..+++     .||+|.+.... ....+.+.+|+.++.++ +||||++++++
T Consensus        39 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  118 (333)
T 2i1m_A           39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGA  118 (333)
T ss_dssp             GGGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            3456667889999999999999999999876553     79999997653 34567899999999999 89999999999


Q ss_pred             eeeCCeEEEEEEecCCCChhhhhhhc-------------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCe
Q 042831          418 CHEKKELLLVYEFMPNGSLDSHLFKE-------------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI  484 (645)
Q Consensus       418 ~~~~~~~~lV~Ey~~~gsL~~~l~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NI  484 (645)
                      |...+..++||||+++|+|.+++...             ...+++..++.++.||+.||.|||+   .+|+||||||+||
T Consensus       119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NI  195 (333)
T 2i1m_A          119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNV  195 (333)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGC
T ss_pred             EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceE
Confidence            99999999999999999999998643             3468999999999999999999999   8999999999999


Q ss_pred             EECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCc
Q 042831          485 MLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQ  562 (645)
Q Consensus       485 Lld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~  562 (645)
                      |++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||........
T Consensus       196 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  275 (333)
T 2i1m_A          196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK  275 (333)
T ss_dssp             EEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH
T ss_pred             EECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH
Confidence            9999999999999999865443322 2233456889999999999999999999999999999998 9999975443211


Q ss_pred             hhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          563 VSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       563 ~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                        .    ......+.     ........    ...+..++..||+.||++|||++|++++|+.
T Consensus       276 --~----~~~~~~~~-----~~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  323 (333)
T 2i1m_A          276 --F----YKLVKDGY-----QMAQPAFA----PKNIYSIMQACWALEPTHRPTFQQICSFLQE  323 (333)
T ss_dssp             --H----HHHHHHTC-----CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --H----HHHHhcCC-----CCCCCCCC----CHHHHHHHHHHhccChhhCcCHHHHHHHHHH
Confidence              1    11111111     01111111    2467788899999999999999999999874

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1.7e-41  Score=359.51  Aligned_cols=251  Identities=26%  Similarity=0.382  Sum_probs=208.2

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      +.|...+.||+|+||.||+|++..+++.||||++....   ....+++.+|++++.+++||||+++++++..++..++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            45778899999999999999999899999999987542   334567899999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+. |+|.+++......+++..+..++.|+++||.|||+   .+|+||||||+|||++.++.+||+|||+++....   
T Consensus       134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~---  206 (348)
T 1u5q_A          134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---  206 (348)
T ss_dssp             ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS---
T ss_pred             ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCC---
Confidence            9996 78888887667789999999999999999999999   8999999999999999999999999999976542   


Q ss_pred             cceeecccCccccCccccc---cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          509 SQTTVLAGTMGYMAPECAT---TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~---~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                        .....||+.|+|||++.   .+.++.++|||||||++|||++|+.||.....      ...........      .+.
T Consensus       207 --~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~------~~~~~~~~~~~------~~~  272 (348)
T 1u5q_A          207 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQNE------SPA  272 (348)
T ss_dssp             --BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSC------CCC
T ss_pred             --CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHhcC------CCC
Confidence              22357999999999884   56789999999999999999999999975432      11222222111      111


Q ss_pred             cc-CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          586 LC-RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       586 l~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      +. ...    .+.+.+++.+||+.||++|||+++++++.+...
T Consensus       273 ~~~~~~----~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~  311 (348)
T 1u5q_A          273 LQSGHW----SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  311 (348)
T ss_dssp             CCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred             CCCCCC----CHHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence            11 112    245677889999999999999999999998754

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.6e-41  Score=360.26  Aligned_cols=255  Identities=24%  Similarity=0.336  Sum_probs=210.8

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~  425 (645)
                      ..++|...+.||+|+||.||+|++..+++.||+|+++..   .....+.+..|..++..+ +||||+++++++.+.+..+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            346789999999999999999999998999999998754   223456788999999988 7999999999999999999


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +||||+++|+|.+++.+. ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        98 lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  173 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW  173 (353)
T ss_dssp             EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence            999999999999998654 468999999999999999999999   8999999999999999999999999999985332


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      . ........||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..+.+.+    .++..      .
T Consensus       174 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~---~~~~~~i----~~~~~------~  239 (353)
T 2i0e_A          174 D-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DELFQSI----MEHNV------A  239 (353)
T ss_dssp             T-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHH----HHCCC------C
T ss_pred             C-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH---HHHHHHH----HhCCC------C
Confidence            2 2234456799999999999999999999999999999999999999975432   1222211    11111      1


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHhccC
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPS-----IRQVIHVLNFE  626 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~~  626 (645)
                      +....    ...+..++.+||+.||++||+     ++++++|.++.
T Consensus       240 ~p~~~----s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~  281 (353)
T 2i0e_A          240 YPKSM----SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFR  281 (353)
T ss_dssp             CCTTS----CHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGT
T ss_pred             CCCCC----CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCcccc
Confidence            11122    245678889999999999994     69999999875

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.7e-41  Score=356.71  Aligned_cols=263  Identities=27%  Similarity=0.380  Sum_probs=211.6

Q ss_pred             HHHHhhcCCCCCCccCcCCcEEEEEEEEc-----CCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeee
Q 042831          346 ELALATNDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWC  418 (645)
Q Consensus       346 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~  418 (645)
                      ++....++|...+.||+|+||.||+|.+.     .++..||+|.+... .....+.+.+|+.++.++ +||||+++++++
T Consensus        39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  118 (344)
T 1rjb_A           39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC  118 (344)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            34456678999999999999999999973     45678999999754 334557899999999999 899999999999


Q ss_pred             eeCCeEEEEEEecCCCChhhhhhhcCC----------------------CCCHHHHHHHHHHHHHHHHHHHhhcCCCeee
Q 042831          419 HEKKELLLVYEFMPNGSLDSHLFKENS----------------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVH  476 (645)
Q Consensus       419 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~----------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH  476 (645)
                      ...+..++||||+++|+|.+++.....                      .+++..++.++.||+.||.|||+   .+|+|
T Consensus       119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH  195 (344)
T 1rjb_A          119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVH  195 (344)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred             eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccc
Confidence            999999999999999999999975432                      37999999999999999999999   89999


Q ss_pred             ccCCCCCeEECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCC
Q 042831          477 RDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPI  554 (645)
Q Consensus       477 ~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf  554 (645)
                      |||||+|||++.++.+||+|||+++........ ......+|+.|+|||.+.++.++.++|||||||++|||++ |+.||
T Consensus       196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  275 (344)
T 1rjb_A          196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY  275 (344)
T ss_dssp             TTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred             CCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCc
Confidence            999999999999999999999999866543322 2233557889999999999999999999999999999998 99999


Q ss_pred             CCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          555 NPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       555 ~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .......  .    .......+..     +.....    ....+..++..||+.||++|||+.|++++|+..
T Consensus       276 ~~~~~~~--~----~~~~~~~~~~-----~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  332 (344)
T 1rjb_A          276 PGIPVDA--N----FYKLIQNGFK-----MDQPFY----ATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ  332 (344)
T ss_dssp             TTCCCSH--H----HHHHHHTTCC-----CCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccCCcHH--H----HHHHHhcCCC-----CCCCCC----CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            7654321  1    1112222211     111111    234677888999999999999999999999853

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3e-41  Score=345.31  Aligned_cols=256  Identities=26%  Similarity=0.389  Sum_probs=191.4

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      .++|...+.||+|+||.||+|.+..+++.||+|.+....   ....+.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            356888999999999999999998889999999986432   22346789999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+++++|.+++......+++..++.++.|+++||.|||+   .+++||||||+||+++.++.+||+|||++.......
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~  166 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH  166 (278)
T ss_dssp             EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred             EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence            99999999999998766789999999999999999999999   899999999999999999999999999998654322


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      . ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.........   .       .-...   +..+.
T Consensus       167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~-------~~~~~---~~~~~  232 (278)
T 3cok_A          167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL---N-------KVVLA---DYEMP  232 (278)
T ss_dssp             --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------CCSS---CCCCC
T ss_pred             C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH---H-------HHhhc---ccCCc
Confidence            1 223456899999999999888999999999999999999999999754432110   0       00000   11111


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ..+    ...+.+++.+||+.||++|||+++++++.++..
T Consensus       233 ~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  268 (278)
T 3cok_A          233 SFL----SIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSR  268 (278)
T ss_dssp             TTS----CHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC-
T ss_pred             ccc----CHHHHHHHHHHcccCHhhCCCHHHHhcCccccC
Confidence            112    245678889999999999999999999998764

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=1.1e-41  Score=356.53  Aligned_cols=262  Identities=22%  Similarity=0.382  Sum_probs=194.6

Q ss_pred             HHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCe---EEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeee
Q 042831          345 KELALATNDFNDDQKLGQGGFGGVYKGFFRETNS---YIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCH  419 (645)
Q Consensus       345 ~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~---~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~  419 (645)
                      +++....++|...+.||+|+||.||+|.+..++.   .||||.+...  .....+++.+|++++++++||||+++++++.
T Consensus        16 ~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   95 (323)
T 3qup_A           16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL   95 (323)
T ss_dssp             CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEE
T ss_pred             hhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceee
Confidence            3455566789999999999999999999877664   8999998754  4456788999999999999999999999998


Q ss_pred             eCCeE------EEEEEecCCCChhhhhhhcC-----CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC
Q 042831          420 EKKEL------LLVYEFMPNGSLDSHLFKEN-----SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS  488 (645)
Q Consensus       420 ~~~~~------~lV~Ey~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~  488 (645)
                      ..+..      ++||||+++|+|.+++....     ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.
T Consensus        96 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~  172 (323)
T 3qup_A           96 RSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAE  172 (323)
T ss_dssp             CC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECT
T ss_pred             ccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcC
Confidence            77655      99999999999999986422     268999999999999999999999   89999999999999999


Q ss_pred             CCcEEEeeccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHH
Q 042831          489 NFNAKIGDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLL  566 (645)
Q Consensus       489 ~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~  566 (645)
                      ++.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||......+   +.
T Consensus       173 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~  249 (323)
T 3qup_A          173 DMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---IY  249 (323)
T ss_dssp             TSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HH
T ss_pred             CCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---HH
Confidence            99999999999986643322 12233456788999999999999999999999999999999 999997644321   11


Q ss_pred             HHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          567 QWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       567 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..    ...+..     .....    .....+.+++.+||+.||++|||+.++++.|+.
T Consensus       250 ~~----~~~~~~-----~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~  295 (323)
T 3qup_A          250 NY----LIGGNR-----LKQPP----ECMEEVYDLMYQCWSADPKQRPSFTCLRMELEN  295 (323)
T ss_dssp             HH----HHTTCC-----CCCCT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HH----HhcCCC-----CCCCC----ccCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            11    111111     11111    123467788999999999999998888877764

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=2.2e-41  Score=351.99  Aligned_cols=269  Identities=25%  Similarity=0.304  Sum_probs=205.6

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-----hhhHHHHHHHHHHHHhc---CCCCccEEEeeeeeC
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-----KQGIKEYASEVKIISRL---RHRNLVQLLGWCHEK  421 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l---~H~nlv~l~~~~~~~  421 (645)
                      ..++|...++||+|+||.||+|++..+++.||||++....     ......+.+|++++.++   +||||++++++|...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            4678999999999999999999999999999999986432     11234566777777766   499999999999875


Q ss_pred             C-----eEEEEEEecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEe
Q 042831          422 K-----ELLLVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG  495 (645)
Q Consensus       422 ~-----~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~  495 (645)
                      .     ..++||||+. ++|.+++.... ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~  162 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLA  162 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCEEEC
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEEe
Confidence            4     5899999996 69999987643 349999999999999999999999   899999999999999999999999


Q ss_pred             eccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC
Q 042831          496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN  575 (645)
Q Consensus       496 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~  575 (645)
                      |||+++.....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+.+....
T Consensus       163 Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~~~  237 (308)
T 3g33_A          163 DFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA---DQLGKIFDLIGL  237 (308)
T ss_dssp             SCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH---HHHHHHHHHHCC
T ss_pred             eCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCC
Confidence            99999865432  2234467899999999999999999999999999999999999999754422   222333332221


Q ss_pred             Cccccc---c---Ccccc--CCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          576 GKLLEA---V---DPRLC--RDFD-----GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       576 ~~l~~~---~---d~~l~--~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      .....+   .   ...+.  ....     .+..+.+.+++.+||+.||++|||+.|+++|.|+..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~  302 (308)
T 3g33_A          238 PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK  302 (308)
T ss_dssp             CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC--
T ss_pred             CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccC
Confidence            110000   0   00000  0000     012256778889999999999999999999998763

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=5.5e-41  Score=345.20  Aligned_cols=252  Identities=26%  Similarity=0.390  Sum_probs=206.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCC-------eEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETN-------SYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE  423 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~-------~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~  423 (645)
                      .++|...+.||+|+||.||+|.+..++       ..||+|.+........+.+.+|++++.+++||||+++++++..++.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            356788899999999999999998766       5799999977766777889999999999999999999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc--------EEEe
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN--------AKIG  495 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~--------~kl~  495 (645)
                      .++||||+++|+|.+++......+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.        +||+
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~  163 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLS  163 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred             CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceeeec
Confidence            999999999999999998766669999999999999999999999   89999999999999998887        9999


Q ss_pred             eccCcccccccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc
Q 042831          496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG  574 (645)
Q Consensus       496 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~  574 (645)
                      |||++.....     .....++..|+|||++.+ ..++.++|||||||++|||++|..|+......  .....   ....
T Consensus       164 Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~--~~~~~---~~~~  233 (289)
T 4fvq_A          164 DPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS--QRKLQ---FYED  233 (289)
T ss_dssp             CCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHH---HHHT
T ss_pred             cCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch--HHHHH---Hhhc
Confidence            9999865432     123457889999999987 67999999999999999999965554322211  11111   1111


Q ss_pred             CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          575 NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       575 ~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ...+.    +..        ...+.+++.+||+.||++|||++|++++|+.--
T Consensus       234 ~~~~~----~~~--------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~  274 (289)
T 4fvq_A          234 RHQLP----APK--------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLF  274 (289)
T ss_dssp             TCCCC----CCS--------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred             cCCCC----CCC--------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            11111    111        124567889999999999999999999998653

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=2.3e-41  Score=377.80  Aligned_cols=260  Identities=25%  Similarity=0.340  Sum_probs=215.0

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ..++|...+.||+|+||.||+|++..+|+.||+|++...   .......+.+|++++.+++||||+++++++.+.+..++
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            346788999999999999999999999999999998653   22345678899999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          427 VYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      ||||+++|+|.+++...+ ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus       262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~  338 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE  338 (576)
T ss_dssp             EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence            999999999999987543 459999999999999999999999   8999999999999999999999999999986543


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      .  .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+   .......      ...
T Consensus       339 ~--~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i---~~~i~~~------~~~  407 (576)
T 2acx_A          339 G--QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV---ERLVKEV------PEE  407 (576)
T ss_dssp             T--CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHH---HHHHHHC------CCC
T ss_pred             C--ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHH---HHHhhcc------ccc
Confidence            2  2334458999999999999988999999999999999999999999865433222111   1111111      111


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccCC
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFEA  627 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~~  627 (645)
                      +...+    ...+..++.+||+.||++||     +++|+++|.++..
T Consensus       408 ~p~~~----s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~  450 (576)
T 2acx_A          408 YSERF----SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK  450 (576)
T ss_dssp             CCTTS----CHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred             CCccC----CHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence            11222    24567888999999999999     8999999999863

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.7e-41  Score=353.33  Aligned_cols=271  Identities=23%  Similarity=0.278  Sum_probs=207.5

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-----hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-----QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE  423 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~  423 (645)
                      ...++|...+.||+|+||.||+|++..+|+.||||++.....     ...+.+.+|++++.+++||||+++++++...+.
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            345789999999999999999999999999999999865322     123468899999999999999999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      .++||||+++ +|..++......+++..+..++.|+++||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus        87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSF  162 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred             eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence            9999999975 8988887777789999999999999999999999   89999999999999999999999999999865


Q ss_pred             cccCCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc-
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA-  581 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~-  581 (645)
                      .... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.....   ......+............ 
T Consensus       163 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~  238 (346)
T 1ua2_A          163 GSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD---LDQLTRIFETLGTPTEEQWP  238 (346)
T ss_dssp             TSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHHHCCCCTTTSS
T ss_pred             cCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH---HHHHHHHHHHcCCCChhhhh
Confidence            4322 233445789999999998764 589999999999999999999999975432   2222222322221111000 


Q ss_pred             --------cCccccCCCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          582 --------VDPRLCRDFDG-----QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       582 --------~d~~l~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                              +...-....+.     .....+.+++.+||+.||++|||++|++++.++..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~  297 (346)
T 1ua2_A          239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN  297 (346)
T ss_dssp             STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTS
T ss_pred             hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhc
Confidence                    00000011111     12256788999999999999999999999999863

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2e-41  Score=344.18  Aligned_cols=254  Identities=27%  Similarity=0.476  Sum_probs=209.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|...+.||+|+||.||+|.+. +++.||+|.+..... ..+++.+|++++.+++||||+++++++.+.+..++||||
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF   84 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred             hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence            457888899999999999999986 478899999976533 346789999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      +++++|.+++......+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.........
T Consensus        85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~  161 (267)
T 3t9t_A           85 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS  161 (267)
T ss_dssp             CTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred             CCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccccccc
Confidence            99999999998777789999999999999999999999   899999999999999999999999999998654322222


Q ss_pred             eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          511 TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......   ....    ....+..  ...+.   .
T Consensus       162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~----~i~~~~~--~~~~~---~  229 (267)
T 3t9t_A          162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVVE----DISTGFR--LYKPR---L  229 (267)
T ss_dssp             TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH----HHHTTCC--CCCCT---T
T ss_pred             cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH---HHHH----HHhcCCc--CCCCc---c
Confidence            233456788999999998899999999999999999999 89999754321   1111    1112211  01111   1


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                          ....+.+++.+||+.||++|||++|++++|+.
T Consensus       230 ----~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~  261 (267)
T 3t9t_A          230 ----ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE  261 (267)
T ss_dssp             ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----CcHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence                12457788899999999999999999999864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=4.9e-41  Score=346.81  Aligned_cols=254  Identities=24%  Similarity=0.354  Sum_probs=211.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      .++|...+.||+|+||.||++.+..+++.||+|.+...   .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            35688899999999999999999999999999998654   334567889999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+++++|.+++... ..+++..++.++.|+++||.|||+   .+++||||||+||+++.++.+||+|||+++......
T Consensus        94 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  169 (294)
T 2rku_A           94 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG  169 (294)
T ss_dssp             EECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence            9999999999987543 468999999999999999999999   899999999999999999999999999998654322


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                       .......|++.|+|||.+.+..++.++||||||+++|||++|+.||......      +.. .....+..      .+.
T Consensus       170 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~-~~~~~~~~------~~~  235 (294)
T 2rku_A          170 -ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK------ETY-LRIKKNEY------SIP  235 (294)
T ss_dssp             -CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHH-HHHHTTCC------CCC
T ss_pred             -cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHH-HHHhhccC------CCc
Confidence             2234457899999999999888999999999999999999999999754321      111 11111111      111


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ...+    ..+.+++.+||+.||++|||++|++++.++.
T Consensus       236 ~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~  270 (294)
T 2rku_A          236 KHIN----PVAASLIQKMLQTDPTARPTINELLNDEFFT  270 (294)
T ss_dssp             TTSC----HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             cccC----HHHHHHHHHHcccChhhCcCHHHHhhChhee
Confidence            1222    3567788999999999999999999998875

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=7.9e-41  Score=353.19  Aligned_cols=266  Identities=20%  Similarity=0.262  Sum_probs=208.8

Q ss_pred             HHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-----ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee
Q 042831          346 ELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-----SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE  420 (645)
Q Consensus       346 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~  420 (645)
                      ++....++|...+.||+|+||.||+|.+..+++.||+|++...     .....+.+.+|++++.+++||||+++++++.+
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   99 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED   99 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence            3455667899999999999999999999999999999998643     33456789999999999999999999999999


Q ss_pred             CCeEEEEEEecCCCChhhhhhhc---------------------------------------CCCCCHHHHHHHHHHHHH
Q 042831          421 KKELLLVYEFMPNGSLDSHLFKE---------------------------------------NSLLTWEFRYKIAQDLAS  461 (645)
Q Consensus       421 ~~~~~lV~Ey~~~gsL~~~l~~~---------------------------------------~~~l~~~~~~~i~~~ia~  461 (645)
                      .+..++||||+++|+|.+++...                                       ...+++..++.++.||+.
T Consensus       100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~  179 (345)
T 3hko_A          100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS  179 (345)
T ss_dssp             SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence            99999999999999999988420                                       112467788899999999


Q ss_pred             HHHHHHhhcCCCeeeccCCCCCeEECCCC--cEEEeeccCcccccccCC---cceeecccCccccCcccccc--CCCCcc
Q 042831          462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNF--NAKIGDFGLARLVEHAKG---SQTTVLAGTMGYMAPECATT--GKASKE  534 (645)
Q Consensus       462 gL~yLH~~~~~~ivH~Dlkp~NILld~~~--~~kl~DfGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~t~~  534 (645)
                      ||.|||+   .+|+||||||+|||++.++  .+||+|||+++.......   .......||+.|+|||.+..  ..++.+
T Consensus       180 ~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  256 (345)
T 3hko_A          180 ALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK  256 (345)
T ss_dssp             HHHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred             HHHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence            9999999   8999999999999998776  899999999986543222   12345679999999999875  678999


Q ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCC
Q 042831          535 SDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRP  614 (645)
Q Consensus       535 sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP  614 (645)
                      +|||||||++|||++|+.||......   ..   ..........  ...+.. ...    ...+.+++.+||+.||++||
T Consensus       257 ~DiwslG~il~el~~g~~pf~~~~~~---~~---~~~~~~~~~~--~~~~~~-~~~----~~~~~~li~~~l~~~p~~Rp  323 (345)
T 3hko_A          257 CDAWSAGVLLHLLLMGAVPFPGVNDA---DT---ISQVLNKKLC--FENPNY-NVL----SPLARDLLSNLLNRNVDERF  323 (345)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHH---HH---HHHHHHCCCC--TTSGGG-GGS----CHHHHHHHHHHSCSCTTTSC
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCChH---HH---HHHHHhcccc--cCCccc-ccC----CHHHHHHHHHHcCCChhHCC
Confidence            99999999999999999999754321   11   1111111110  001111 111    24567888999999999999


Q ss_pred             CHHHHHHHhccCC
Q 042831          615 SIRQVIHVLNFEA  627 (645)
Q Consensus       615 s~~evl~~L~~~~  627 (645)
                      ++.|++++.++..
T Consensus       324 s~~~~l~hp~~~~  336 (345)
T 3hko_A          324 DAMRALQHPWISQ  336 (345)
T ss_dssp             CHHHHHHSHHHHT
T ss_pred             CHHHHhcChhhcc
Confidence            9999999998764

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=3.8e-41  Score=350.35  Aligned_cols=261  Identities=25%  Similarity=0.364  Sum_probs=212.3

Q ss_pred             HHHhhcCCCCCCccCcCCcEEEEEEEE-----cCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCCccEEEeeee
Q 042831          347 LALATNDFNDDQKLGQGGFGGVYKGFF-----RETNSYIAVKRVSQGS-KQGIKEYASEVKIISRL-RHRNLVQLLGWCH  419 (645)
Q Consensus       347 l~~~~~~f~~~~~LG~G~fG~Vy~g~~-----~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~  419 (645)
                      +....++|...+.||+|+||.||+|.+     ..+++.||+|++.... ....+.+.+|+.++.++ +||||+++++++.
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   97 (313)
T 1t46_A           18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (313)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence            334456888899999999999999985     3567899999997653 34567899999999999 8999999999999


Q ss_pred             eCCeEEEEEEecCCCChhhhhhhcCC-----------------CCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCC
Q 042831          420 EKKELLLVYEFMPNGSLDSHLFKENS-----------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS  482 (645)
Q Consensus       420 ~~~~~~lV~Ey~~~gsL~~~l~~~~~-----------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~  482 (645)
                      ..+..++||||+++|+|.+++.....                 .+++..++.++.||++||.|||+   .+++||||||+
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~  174 (313)
T 1t46_A           98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAAR  174 (313)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGG
T ss_pred             cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccc
Confidence            99999999999999999999975432                 48999999999999999999999   89999999999


Q ss_pred             CeEECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCC
Q 042831          483 NIMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQ  560 (645)
Q Consensus       483 NILld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~  560 (645)
                      ||+++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......
T Consensus       175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~  254 (313)
T 1t46_A          175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD  254 (313)
T ss_dssp             GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred             eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch
Confidence            999999999999999999876543322 1223457789999999999999999999999999999999 99999765432


Q ss_pred             CchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          561 GQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       561 ~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..  ...    ....+.     .+.....    ....+.+++.+||+.||++|||++|++++|+.
T Consensus       255 ~~--~~~----~~~~~~-----~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  304 (313)
T 1t46_A          255 SK--FYK----MIKEGF-----RMLSPEH----APAEMYDIMKTCWDADPLKRPTFKQIVQLIEK  304 (313)
T ss_dssp             HH--HHH----HHHHTC-----CCCCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hH--HHH----HhccCC-----CCCCccc----CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence            11  111    111111     1111111    22467788899999999999999999999974

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=5.4e-42  Score=359.80  Aligned_cols=262  Identities=25%  Similarity=0.371  Sum_probs=212.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEE----cCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeee--eCCeEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFF----RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCH--EKKELL  425 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~----~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~--~~~~~~  425 (645)
                      ++|...++||+|+||.||++++    ..+++.||||++........+.+.+|++++.+++||||+++++++.  +.+..+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            5778899999999999999994    5678999999998877777788999999999999999999999886  456789


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +||||+++++|.+++......+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  179 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPL  179 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred             EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence            9999999999999997766679999999999999999999999   8999999999999999999999999999987653


Q ss_pred             cCCc--ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCC--------chhHHHHHHHHhcC
Q 042831          506 AKGS--QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQG--------QVSLLQWVWDLYGN  575 (645)
Q Consensus       506 ~~~~--~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~--------~~~l~~~~~~~~~~  575 (645)
                      ....  ......++..|+|||++.+..++.++||||||+++|||++|+.||.......        .......+......
T Consensus       180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (327)
T 3lxl_A          180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE  259 (327)
T ss_dssp             TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred             CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence            3322  1233457888999999998889999999999999999999999986322100        00001111111111


Q ss_pred             CccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          576 GKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       576 ~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      +.         ....+......+.+++.+||+.||++|||++|++++|+.
T Consensus       260 ~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  300 (327)
T 3lxl_A          260 GQ---------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDM  300 (327)
T ss_dssp             TC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cc---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            11         111122233567788899999999999999999999974

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=3.2e-41  Score=344.93  Aligned_cols=259  Identities=20%  Similarity=0.309  Sum_probs=212.4

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|...+.||+|+||.||+|.+..++..||+|++........+.+.+|++++.+++||||+++++++.+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            45688899999999999999999999999999999876556678899999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE---CCCCcEEEeeccCcccccccC
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML---DSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl---d~~~~~kl~DfGla~~~~~~~  507 (645)
                      +++++|.+++... ..+++..++.++.|++.||.|||+   .+++||||||+||++   +.++.+||+|||++.......
T Consensus        88 ~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~  163 (277)
T 3f3z_A           88 CTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK  163 (277)
T ss_dssp             CCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred             cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence            9999999988654 458999999999999999999999   899999999999999   788999999999998654332


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                        ......||+.|+|||.+.+ .++.++||||||+++|||++|+.||......   ....    ...++...  ......
T Consensus       164 --~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~----~~~~~~~~--~~~~~~  231 (277)
T 3f3z_A          164 --MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS---EVML----KIREGTFT--FPEKDW  231 (277)
T ss_dssp             --CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCCC--CCHHHH
T ss_pred             --chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH---HHHH----HHHhCCCC--CCchhh
Confidence              2334569999999998865 4899999999999999999999999754321   1111    11111110  000000


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPL  629 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~  629 (645)
                      ...    ...+.+++..||+.||++|||+.|++++.++...+
T Consensus       232 ~~~----~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~  269 (277)
T 3f3z_A          232 LNV----SPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQL  269 (277)
T ss_dssp             TTS----CHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHH
T ss_pred             hcC----CHHHHHHHHHHccCChhhCcCHHHHhcCHHHhccc
Confidence            111    24677888999999999999999999999876433

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=8.6e-41  Score=341.23  Aligned_cols=262  Identities=26%  Similarity=0.360  Sum_probs=213.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .++|...+.||+|+||.||+|.+..+++.||+|.+... .....+.+.+|+.++.+++||||+++++++.+++..++|||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            35688899999999999999999988999999998644 33456788999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC-
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-  508 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~-  508 (645)
                      |+++++|.+++.. ...+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........ 
T Consensus        86 ~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~  161 (276)
T 2yex_A           86 YCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  161 (276)
T ss_dssp             CCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             ecCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence            9999999998853 4568999999999999999999998   8999999999999999999999999999986543221 


Q ss_pred             cceeecccCccccCccccccCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          509 SQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~-t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      .......|+..|+|||.+.+..+ +.++||||||+++|||++|+.||........ ....|     ......  ..+  .
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~-----~~~~~~--~~~--~  231 (276)
T 2yex_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDW-----KEKKTY--LNP--W  231 (276)
T ss_dssp             CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHHH-----HTTCTT--STT--G
T ss_pred             hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHh-----hhcccc--cCc--h
Confidence            22334578999999999987765 7899999999999999999999976543321 11111     111100  000  0


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLP  630 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  630 (645)
                      ...    ...+.+++..||+.||++|||++|++++.++..+..
T Consensus       232 ~~~----~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~  270 (276)
T 2yex_A          232 KKI----DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (276)
T ss_dssp             GGS----CHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             hhc----CHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence            111    235677889999999999999999999999876543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=9.3e-41  Score=366.20  Aligned_cols=250  Identities=30%  Similarity=0.434  Sum_probs=205.3

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC-eEEEE
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK-ELLLV  427 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~-~~~lV  427 (645)
                      ...++|...++||+|+||.||+|.+.  ++.||||+++...  ..+.|.+|+.++.+++||||++++++|.+.+ ..++|
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv  265 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV  265 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred             cChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence            44567888999999999999999986  6799999997553  4578999999999999999999999987665 79999


Q ss_pred             EEecCCCChhhhhhhcCC-CCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          428 YEFMPNGSLDSHLFKENS-LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||++|+|.+++...+. .+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus       266 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  342 (450)
T 1k9a_A          266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST  342 (450)
T ss_dssp             EECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence            999999999999986543 47999999999999999999999   89999999999999999999999999999854321


Q ss_pred             CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                          .....++..|+|||++.+..++.++|||||||++|||++ |+.||......+   ...    ...++...     .
T Consensus       343 ----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~----~i~~~~~~-----~  406 (450)
T 1k9a_A          343 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVP----RVEKGYKM-----D  406 (450)
T ss_dssp             --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HHH----HHHTTCCC-----C
T ss_pred             ----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHHcCCCC-----C
Confidence                122357889999999999999999999999999999998 999998654332   111    12222111     1


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....    ....+.+++..||+.||++|||++++++.|+.
T Consensus       407 ~p~~----~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~  442 (450)
T 1k9a_A          407 APDG----CPPAVYDVMKNCWHLDAATRPTFLQLREQLEH  442 (450)
T ss_dssp             CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCc----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            1112    23467788899999999999999999998863

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.6e-41  Score=358.84  Aligned_cols=258  Identities=22%  Similarity=0.329  Sum_probs=202.0

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCC--CCccEEEeeeeeCCeE
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRH--RNLVQLLGWCHEKKEL  424 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H--~nlv~l~~~~~~~~~~  424 (645)
                      ...++|...+.||+|+||.||++.+. +++.||||++...  ..+..+.+.+|+.++.+++|  +||+++++++..++..
T Consensus         6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~   84 (343)
T 3dbq_A            6 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI   84 (343)
T ss_dssp             SSSCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             eecCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEE
Confidence            34567889999999999999999885 5889999998654  44556789999999999987  9999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++||| +.+++|.+++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++ ++.+||+|||+++...
T Consensus        85 ~lv~e-~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~  158 (343)
T 3dbq_A           85 YMVME-CGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  158 (343)
T ss_dssp             EEEEC-CCSEEHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred             EEEEe-CCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence            99999 568899999965 4568999999999999999999999   8999999999999997 5789999999998765


Q ss_pred             ccCCc-ceeecccCccccCcccccc-----------CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHH
Q 042831          505 HAKGS-QTTVLAGTMGYMAPECATT-----------GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDL  572 (645)
Q Consensus       505 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~  572 (645)
                      ..... ......||+.|+|||++.+           ..++.++|||||||++|||++|+.||......     .......
T Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~~  233 (343)
T 3dbq_A          159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHAI  233 (343)
T ss_dssp             -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHH
T ss_pred             cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH-----HHHHHHH
Confidence            33222 2334679999999999865           67899999999999999999999999743221     1111111


Q ss_pred             hcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          573 YGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       573 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      .         ++.....++......+.+++..||+.||++|||+.|+++|.|+..
T Consensus       234 ~---------~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~  279 (343)
T 3dbq_A          234 I---------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  279 (343)
T ss_dssp             H---------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             h---------cCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence            1         111111111112245678889999999999999999999998753

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=3.5e-41  Score=345.26  Aligned_cols=254  Identities=27%  Similarity=0.393  Sum_probs=207.3

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      +.++|...+.||+|+||.||+|.+..+++.||+|++....   ....+.+.+|+.++.+++||||+++++++.+.+..++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            3467888999999999999999999999999999986432   2235678899999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++++|.+++... ..+++..+..++.||+.||.|||+   .+|+||||||+||+++.++.+||+|||++..... 
T Consensus        87 v~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~-  161 (279)
T 3fdn_A           87 ILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-  161 (279)
T ss_dssp             EECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred             EEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCc-
Confidence            99999999999998654 468999999999999999999998   8999999999999999999999999999864432 


Q ss_pred             CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                        .......|++.|+|||.+.+..++.++||||||+++|||++|+.||......   ....    .....      ...+
T Consensus       162 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~----~~~~~------~~~~  226 (279)
T 3fdn_A          162 --SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ---ETYK----RISRV------EFTF  226 (279)
T ss_dssp             --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHH----HHHHT------CCCC
T ss_pred             --ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH---HHHH----HHHhC------CCCC
Confidence              2233457899999999999999999999999999999999999999753321   1111    11111      1111


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ...    ....+.+++..||+.||++|||++|+++|.++..
T Consensus       227 ~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~  263 (279)
T 3fdn_A          227 PDF----VTEGARDLISRLLKHNPSQRPMLREVLEHPWITA  263 (279)
T ss_dssp             CTT----SCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHH
T ss_pred             CCc----CCHHHHHHHHHHhccChhhCCCHHHHhhCccccC
Confidence            111    2245677889999999999999999999999753

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=1.6e-40  Score=347.72  Aligned_cols=257  Identities=22%  Similarity=0.287  Sum_probs=211.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh------hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK------QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~------~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~  424 (645)
                      .++|...+.||+|+||.||+|++..+|+.||+|.+.....      ...+.+.+|+.++.+++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            4568889999999999999999999999999999875422      1357899999999999999999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC----cEEEeeccCc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF----NAKIGDFGLA  500 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~----~~kl~DfGla  500 (645)
                      ++||||+++++|.+++.. ...+++..++.++.|++.||.|||+   .+|+||||||+||+++.++    .+||+|||++
T Consensus        91 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~  166 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (321)
T ss_dssp             EEEECCCCSCBHHHHHHT-CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred             EEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence            999999999999999854 4568999999999999999999999   8999999999999999887    7999999999


Q ss_pred             ccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc
Q 042831          501 RLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE  580 (645)
Q Consensus       501 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~  580 (645)
                      +......  ......||+.|+|||++.+..++.++||||||+++|||++|+.||......   ....   . ...+..  
T Consensus       167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~---~-i~~~~~--  235 (321)
T 2a2a_A          167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---ETLA---N-ITSVSY--  235 (321)
T ss_dssp             EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHH---H-HHTTCC--
T ss_pred             eecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH---HHHH---H-HHhccc--
Confidence            8654322  233456899999999999999999999999999999999999999754321   1111   1 111111  


Q ss_pred             ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       581 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..++......    ...+.+++.+||+.||++|||++|+++|.++.
T Consensus       236 ~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~  277 (321)
T 2a2a_A          236 DFDEEFFSHT----SELAKDFIRKLLVKETRKRLTIQEALRHPWIT  277 (321)
T ss_dssp             CCCHHHHTTC----CHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTS
T ss_pred             ccChhhhccc----CHHHHHHHHHHcCCChhhCcCHHHHhcCcccc
Confidence            1111111122    24577888999999999999999999999875

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=5.4e-41  Score=344.19  Aligned_cols=256  Identities=26%  Similarity=0.389  Sum_probs=205.8

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcC---CCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRE---TNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~---~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      ..++|...+.||+|+||.||+|++..   ++..||+|.+... .....+.+.+|+.++.+++||||+++++++.+ +..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence            45678889999999999999998754   3456999998765 34456789999999999999999999999865 4568


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +||||+++++|.+++......+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++....
T Consensus        89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  165 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIED  165 (281)
T ss_dssp             EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred             EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence            9999999999999998777789999999999999999999999   8999999999999999999999999999987654


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      ..........++..|+|||.+.+..++.++||||||+++|||++ |+.||......+   ....+    ..+...     
T Consensus       166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~~~----~~~~~~-----  233 (281)
T 3cc6_A          166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIGVL----EKGDRL-----  233 (281)
T ss_dssp             -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHHHH----HHTCCC-----
T ss_pred             ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHHHH----hcCCCC-----
Confidence            43333344567889999999998899999999999999999998 999997544322   22111    111110     


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ......    ...+.+++.+||+.||++|||+.|++++|+.
T Consensus       234 ~~~~~~----~~~l~~li~~~l~~~p~~Rps~~ell~~L~~  270 (281)
T 3cc6_A          234 PKPDLC----PPVLYTLMTRCWDYDPSDRPRFTELVCSLSD  270 (281)
T ss_dssp             CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCC----CHHHHHHHHHHccCCchhCcCHHHHHHHHHH
Confidence            111112    2457788899999999999999999999863

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=1.4e-41  Score=347.89  Aligned_cols=261  Identities=25%  Similarity=0.380  Sum_probs=211.3

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeee--eCCeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCH--EKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~--~~~~~~l  426 (645)
                      .++|...+.||+|+||.||++.+..+++.||+|.+...  .....+.+.+|+.++.+++||||+++++++.  ..+..++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            45788899999999999999999999999999999754  3445678999999999999999999999885  4578999


Q ss_pred             EEEecCCCChhhhhhhc---CCCCCHHHHHHHHHHHHHHHHHHHhhcCCC-----eeeccCCCCCeEECCCCcEEEeecc
Q 042831          427 VYEFMPNGSLDSHLFKE---NSLLTWEFRYKIAQDLASGLLYLQEEWEQC-----VVHRDIKSSNIMLDSNFNAKIGDFG  498 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-----ivH~Dlkp~NILld~~~~~kl~DfG  498 (645)
                      ||||+++++|.+++...   ...+++..++.++.|++.||.|||+   .+     ++||||||+||+++.++.+||+|||
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg  161 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG  161 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence            99999999999998653   3459999999999999999999999   66     9999999999999999999999999


Q ss_pred             CcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcc
Q 042831          499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL  578 (645)
Q Consensus       499 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l  578 (645)
                      +++...... .......|+..|+|||.+.+..++.++||||||+++|||++|+.||.....   ..+..    ...++..
T Consensus       162 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~----~i~~~~~  233 (279)
T 2w5a_A          162 LARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---KELAG----KIREGKF  233 (279)
T ss_dssp             HHHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHH----HHHHTCC
T ss_pred             hheeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH---HHHHH----HHhhccc
Confidence            998654322 122335689999999999998999999999999999999999999975432   11221    1222222


Q ss_pred             ccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCCC
Q 042831          579 LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPA  631 (645)
Q Consensus       579 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p~  631 (645)
                      .     .+...+    ...+.+++.+||+.||++|||++|+++++++.++.+.
T Consensus       234 ~-----~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~  277 (279)
T 2w5a_A          234 R-----RIPYRY----SDELNEIITRMLNLKDYHRPSVEEILENPLILEHHHH  277 (279)
T ss_dssp             C-----CCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGSC
T ss_pred             c-----cCCccc----CHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhccc
Confidence            1     111122    2467788899999999999999999999998766554

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=1.2e-40  Score=345.31  Aligned_cols=260  Identities=25%  Similarity=0.319  Sum_probs=206.8

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC----hhhHHHHHHHHHHHHhcCCCCccEEEeeee--eCCeE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS----KQGIKEYASEVKIISRLRHRNLVQLLGWCH--EKKEL  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~--~~~~~  424 (645)
                      .++|...+.||+|+||.||++.+..+++.||+|.+....    ....+.+.+|++++.+++||||+++++++.  +.+..
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            468999999999999999999999999999999986532    244678999999999999999999999984  45688


Q ss_pred             EEEEEecCCCChhhhhhh-cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          425 LLVYEFMPNGSLDSHLFK-ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      ++||||++++ |.+++.. ....+++..+..++.||+.||.|||+   .+++||||||+||+++.++.+||+|||++...
T Consensus        84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~  159 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEAL  159 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence            9999999877 6666654 35679999999999999999999999   89999999999999999999999999999866


Q ss_pred             cccC-CcceeecccCccccCccccccCC--CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc
Q 042831          504 EHAK-GSQTTVLAGTMGYMAPECATTGK--ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE  580 (645)
Q Consensus       504 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~  580 (645)
                      .... ........|+..|+|||++.+..  .+.++||||||+++|||++|+.||.....   ..+    ......+..  
T Consensus       160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~----~~~i~~~~~--  230 (305)
T 2wtk_C          160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI---YKL----FENIGKGSY--  230 (305)
T ss_dssp             CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH---HHH----HHHHHHCCC--
T ss_pred             CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH---HHH----HHHHhcCCC--
Confidence            4322 22334467899999999987654  47899999999999999999999975331   111    112222211  


Q ss_pred             ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCCC
Q 042831          581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPA  631 (645)
Q Consensus       581 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p~  631 (645)
                          .+...+    ...+.+++.+||+.||++|||++|++++.++....|.
T Consensus       231 ----~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~  273 (305)
T 2wtk_C          231 ----AIPGDC----GPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPP  273 (305)
T ss_dssp             ----CCCSSS----CHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCCC
T ss_pred             ----CCCCcc----CHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCCC
Confidence                111222    2456778899999999999999999999987654443

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=5e-41  Score=342.22  Aligned_cols=250  Identities=31%  Similarity=0.475  Sum_probs=194.0

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC----hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS----KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .++|...+.||+|+||.||+|.+.  ++.||||++....    ....+.+.+|++++.+++||||+++++++..++..++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL   83 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence            457888999999999999999985  7889999986542    2335788999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCC---eeeccCCCCCeEECC--------CCcEEEe
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC---VVHRDIKSSNIMLDS--------NFNAKIG  495 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~---ivH~Dlkp~NILld~--------~~~~kl~  495 (645)
                      ||||+++++|.+++.  +..+++..++.++.|+++||.|||+   ++   ++||||||+|||++.        ++.+||+
T Consensus        84 v~e~~~~~~L~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~  158 (271)
T 3dtc_A           84 VMEFARGGPLNRVLS--GKRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT  158 (271)
T ss_dssp             EEECCTTEEHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred             EEEcCCCCCHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence            999999999999884  4578999999999999999999999   66   999999999999986        7789999


Q ss_pred             eccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC
Q 042831          496 DFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN  575 (645)
Q Consensus       496 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~  575 (645)
                      |||+++......   .....|++.|+|||.+.+..++.++||||||++++||++|+.||......      ........ 
T Consensus       159 Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~-  228 (271)
T 3dtc_A          159 DFGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL------AVAYGVAM-  228 (271)
T ss_dssp             CCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH------HHHHHHHT-
T ss_pred             cCCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHhhhc-
Confidence            999997654322   22456899999999999999999999999999999999999999754321      11111111 


Q ss_pred             CccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          576 GKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       576 ~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....    .....    .....+.+++.+||+.||++|||++|++++|+.
T Consensus       229 ~~~~----~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          229 NKLA----LPIPS----TCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             SCCC----CCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             CCCC----CCCCc----ccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence            1111    11111    223467788899999999999999999999863

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=6.4e-41  Score=351.99  Aligned_cols=254  Identities=22%  Similarity=0.317  Sum_probs=200.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEc---CCCeEEEEEEeccCC----hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFR---ETNSYIAVKRVSQGS----KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE  423 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~---~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~  423 (645)
                      .++|...+.||+|+||.||+++..   .+++.||+|++....    ......+.+|+.++.+++||||+++++++...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            457888999999999999999985   578999999987542    2345667899999999999999999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      .++||||+++++|.+++... ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~  171 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKES  171 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred             EEEEEeCCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence            99999999999999998654 468999999999999999999999   89999999999999999999999999999754


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ......+.    ++..     
T Consensus       172 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~i~----~~~~-----  238 (327)
T 3a62_A          172 IHD-GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR---KKTIDKIL----KCKL-----  238 (327)
T ss_dssp             --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHH----HTCC-----
T ss_pred             ccC-CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH---HHHHHHHH----hCCC-----
Confidence            322 1223345799999999999999999999999999999999999999975432   11222111    1111     


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE  626 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~  626 (645)
                       .+....    ...+.+++.+||+.||++||     +++|+++|.++.
T Consensus       239 -~~p~~~----~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~  281 (327)
T 3a62_A          239 -NLPPYL----TQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR  281 (327)
T ss_dssp             -CCCTTS----CHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGS
T ss_pred             -CCCCCC----CHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCccc
Confidence             111112    24567788999999999999     889999999975

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=1.8e-40  Score=340.56  Aligned_cols=257  Identities=22%  Similarity=0.326  Sum_probs=211.0

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      .++|...+.||+|+||.||+|.+..+++.||+|++...  .....+.+.+|+.++.+++||||+++++++..++..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            46788999999999999999999999999999998654  3445678889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc---EEEeeccCcccccc
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN---AKIGDFGLARLVEH  505 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~---~kl~DfGla~~~~~  505 (645)
                      ||+++++|.+++... ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.   +||+|||++.....
T Consensus        85 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~  160 (284)
T 3kk8_A           85 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  160 (284)
T ss_dssp             CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred             ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence            999999999888654 568999999999999999999999   89999999999999986655   99999999976543


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      .  .......|++.|+|||.+.+..++.++||||||+++|||++|+.||......   ....    ....+... ...+.
T Consensus       161 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---~~~~----~~~~~~~~-~~~~~  230 (284)
T 3kk8_A          161 S--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYA----QIKAGAYD-YPSPE  230 (284)
T ss_dssp             S--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHTCCC-CCTTT
T ss_pred             C--ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh---HHHH----HHHhcccc-CCchh
Confidence            2  2233467899999999999999999999999999999999999999754321   1111    11111111 00111


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                       ....    ...+.+++.+||+.||++|||++|++++.++.
T Consensus       231 -~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~  266 (284)
T 3kk8_A          231 -WDTV----TPEAKSLIDSMLTVNPKKRITADQALKVPWIC  266 (284)
T ss_dssp             -TTTS----CHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHH
T ss_pred             -hccc----CHHHHHHHHHHcccChhhCCCHHHHhcCcccc
Confidence             1112    24567888999999999999999999998864

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=7.8e-42  Score=358.39  Aligned_cols=268  Identities=22%  Similarity=0.307  Sum_probs=204.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChh-hHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ-GIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|...++||+|+||.||+|++..+++.||+|++...... ....+.+|++++.+++||||+++++++..++..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            4688899999999999999999989999999998654322 222456799999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ  510 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~  510 (645)
                      ++ |+|.+++...+..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus        82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~  156 (324)
T 3mtl_A           82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KT  156 (324)
T ss_dssp             CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred             cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCc-cc
Confidence            96 69999988777789999999999999999999998   899999999999999999999999999997554322 22


Q ss_pred             eeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCc---cccccC---
Q 042831          511 TTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK---LLEAVD---  583 (645)
Q Consensus       511 ~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~---l~~~~d---  583 (645)
                      .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......   .....+....+...   +.....   
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~  233 (324)
T 3mtl_A          157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE---EQLHFIFRILGTPTEETWPGILSNEE  233 (324)
T ss_dssp             ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred             cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCChHhchhhhcchh
Confidence            334568999999999876 56899999999999999999999999764432   22333333222111   000000   


Q ss_pred             ------ccccCCC----CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          584 ------PRLCRDF----DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       584 ------~~l~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                            +......    .......+.+++.+||+.||++|||++|+++|.|+..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  287 (324)
T 3mtl_A          234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS  287 (324)
T ss_dssp             HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred             hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhh
Confidence                  0000000    0011245678899999999999999999999999863

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.6e-41  Score=371.96  Aligned_cols=257  Identities=26%  Similarity=0.372  Sum_probs=202.6

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ..++|...++||+|+||.||+|++..+|+.||||++...   .......+.+|+.++.+++||||++++++|...+..++
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l  225 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF  225 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence            346788999999999999999999999999999998653   33445678899999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++|+|.+++... ..+++..+..++.||+.||.|||+  ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus       226 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  302 (446)
T 4ejn_A          226 VMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD  302 (446)
T ss_dssp             EECCCSSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred             EEeeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence            99999999999988654 468999999999999999999996  278999999999999999999999999999754322


Q ss_pred             CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                       ........||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+...+    ..+..      .+
T Consensus       303 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~i----~~~~~------~~  368 (446)
T 4ejn_A          303 -GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFELI----LMEEI------RF  368 (446)
T ss_dssp             -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHH----HHCCC------CC
T ss_pred             -CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH---HHHHHH----HhCCC------CC
Confidence             22334567999999999999999999999999999999999999999754321   122111    11111      11


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccCC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFEA  627 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~~  627 (645)
                      ....    ...+.+++..||+.||++||     +++|+++|.++..
T Consensus       369 p~~~----~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~  410 (446)
T 4ejn_A          369 PRTL----GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG  410 (446)
T ss_dssp             CTTS----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             CccC----CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccC
Confidence            1122    24567888999999999999     9999999999864

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=6.3e-41  Score=344.82  Aligned_cols=256  Identities=25%  Similarity=0.372  Sum_probs=204.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .++|...++||+|+||.||++....++..||+|++.... ....+.+.+|++++.+++||||+++++++.+.+..++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            356888999999999999999999999999999987543 3356789999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE---CCCCcEEEeeccCcccc
Q 042831          430 FMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML---DSNFNAKIGDFGLARLV  503 (645)
Q Consensus       430 y~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl---d~~~~~kl~DfGla~~~  503 (645)
                      |+++|+|.+++..   .+..+++..++.++.||+.||.|||+   .+|+||||||+||++   +.++.+||+|||+++..
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~  177 (285)
T 3is5_A          101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF  177 (285)
T ss_dssp             CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred             eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence            9999999998864   34679999999999999999999999   899999999999999   45678999999999865


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ...  .......|++.|+|||.+. +.++.++||||||+++|||++|+.||......   .......  .......    
T Consensus       178 ~~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~---~~~~~~~--~~~~~~~----  245 (285)
T 3is5_A          178 KSD--EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE---EVQQKAT--YKEPNYA----  245 (285)
T ss_dssp             -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH--HCCCCCC----
T ss_pred             CCc--ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH---HHHhhhc--cCCcccc----
Confidence            432  2234457899999999875 56899999999999999999999999754321   1111110  1111100    


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                       ......    ...+.+++.+||+.||++|||++|++++.++.
T Consensus       246 -~~~~~~----~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~  283 (285)
T 3is5_A          246 -VECRPL----TPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK  283 (285)
T ss_dssp             -C--CCC----CHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGG
T ss_pred             -cccCcC----CHHHHHHHHHHccCChhhCcCHHHHhcCHHhh
Confidence             001112    24566788999999999999999999998875

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.4e-41  Score=343.97  Aligned_cols=255  Identities=26%  Similarity=0.418  Sum_probs=207.5

Q ss_pred             hcCCCCCC-ccCcCCcEEEEEEEEc--CCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          351 TNDFNDDQ-KLGQGGFGGVYKGFFR--ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~-~LG~G~fG~Vy~g~~~--~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .++|...+ .||+|+||.||+|.+.  .++..||+|.+... .....+++.+|++++.+++||||+++++++ ..+..++
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l   86 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML   86 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence            34555555 8999999999999864  46788999999765 345677899999999999999999999999 5567999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++++|.+++......+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.....
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~  163 (287)
T 1u59_A           87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD  163 (287)
T ss_dssp             EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred             EEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence            999999999999997777789999999999999999999999   89999999999999999999999999999876433


Q ss_pred             CCc--ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          507 KGS--QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       507 ~~~--~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ...  ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......   .+..    ....+..     
T Consensus       164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~----~i~~~~~-----  231 (287)
T 1u59_A          164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMA----FIEQGKR-----  231 (287)
T ss_dssp             SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---HHHH----HHHTTCC-----
T ss_pred             cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH---HHHH----HHhcCCc-----
Confidence            221  1223456889999999988889999999999999999998 99999754432   1221    1222221     


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      +.....    ....+.+++..||+.||++||++++++++|+.
T Consensus       232 ~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  269 (287)
T 1u59_A          232 MECPPE----CPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  269 (287)
T ss_dssp             CCCCTT----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCC----cCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            111112    23467788899999999999999999999984

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.1e-40  Score=358.39  Aligned_cols=267  Identities=22%  Similarity=0.295  Sum_probs=211.3

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC--------CCCccEEEeeee---
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR--------HRNLVQLLGWCH---  419 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~--------H~nlv~l~~~~~---  419 (645)
                      .++|...++||+|+||.||+|++..+++.||||++... ....+.+.+|+.++.+++        |+||+++++++.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            57899999999999999999999999999999999644 345677889999999986        788999999987   


Q ss_pred             -eCCeEEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCC-CeeeccCCCCCeEECCCC------
Q 042831          420 -EKKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQ-CVVHRDIKSSNIMLDSNF------  490 (645)
Q Consensus       420 -~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivH~Dlkp~NILld~~~------  490 (645)
                       .....++||||+ +++|.+.+... ...+++..++.++.||+.||.|||+   + +|+||||||+|||++.++      
T Consensus       115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~~~~~~  190 (397)
T 1wak_A          115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQYIRRL  190 (397)
T ss_dssp             TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred             CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccchhhhhh
Confidence             556899999999 56666666543 4679999999999999999999998   7 999999999999999775      


Q ss_pred             -------------------------------------------cEEEeeccCcccccccCCcceeecccCccccCccccc
Q 042831          491 -------------------------------------------NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT  527 (645)
Q Consensus       491 -------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~  527 (645)
                                                                 .+||+|||+++.....    .....||+.|+|||++.
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~  266 (397)
T 1wak_A          191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLI  266 (397)
T ss_dssp             HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHH
T ss_pred             hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhc
Confidence                                                       7999999999865432    23356899999999999


Q ss_pred             cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCch---hHHHHHHHHhcC--------Cccc-cccCc--------cc-
Q 042831          528 TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQV---SLLQWVWDLYGN--------GKLL-EAVDP--------RL-  586 (645)
Q Consensus       528 ~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~---~l~~~~~~~~~~--------~~l~-~~~d~--------~l-  586 (645)
                      +..++.++|||||||++|||++|+.||.........   .....+....+.        +... +....        .. 
T Consensus       267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (397)
T 1wak_A          267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK  346 (397)
T ss_dssp             TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence            999999999999999999999999999865543321   111212221111        0000 00000        00 


Q ss_pred             ----------cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          587 ----------CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       587 ----------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                                ....+......+.+|+.+||+.||++|||++|+++|.|+.
T Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             CcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence                      0123556778899999999999999999999999998864

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=7.7e-41  Score=352.64  Aligned_cols=249  Identities=24%  Similarity=0.359  Sum_probs=207.8

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh--------hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK--------QGIKEYASEVKIISRLRHRNLVQLLGWCHEKK  422 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~  422 (645)
                      .++|...+.||+|+||.||+|++..+++.||||++.....        ...+.+.+|+.++.+++||||+++++++.+.+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            4678999999999999999999999999999999875421        13346778999999999999999999999999


Q ss_pred             eEEEEEEecCCC-ChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          423 ELLLVYEFMPNG-SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       423 ~~~lV~Ey~~~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      ..++||||+.+| +|.+++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~  178 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDR-HPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAA  178 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHT-CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             EEEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeecccce
Confidence            999999999877 99888854 4569999999999999999999999   899999999999999999999999999998


Q ss_pred             cccccCCcceeecccCccccCccccccCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE  580 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~  580 (645)
                      ......  ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......                 ...
T Consensus       179 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----------------~~~  239 (335)
T 3dls_A          179 YLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-----------------VEA  239 (335)
T ss_dssp             ECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----------------TTT
T ss_pred             ECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----------------Hhh
Confidence            765332  2334579999999999988776 88999999999999999999999642110                 000


Q ss_pred             ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       581 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      ...+  ...+    ...+.+++..||++||++|||++|++++.|+..+
T Consensus       240 ~~~~--~~~~----~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          240 AIHP--PYLV----SKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             CCCC--SSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred             ccCC--Cccc----CHHHHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence            0011  0111    2357788899999999999999999999997653

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1e-40  Score=347.14  Aligned_cols=250  Identities=27%  Similarity=0.487  Sum_probs=197.1

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|...+.||+|+||.||+|++.  ++.||+|++...  ...+.+.+|++++++++||||+++++++.+  ..++||||+
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~   81 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA   81 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred             hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence            46778899999999999999885  688999998643  345789999999999999999999999874  479999999


Q ss_pred             CCCChhhhhhhcCC--CCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc-EEEeeccCcccccccCC
Q 042831          432 PNGSLDSHLFKENS--LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN-AKIGDFGLARLVEHAKG  508 (645)
Q Consensus       432 ~~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~-~kl~DfGla~~~~~~~~  508 (645)
                      ++|+|.+++.....  .+++..++.++.|+++||.|||+.+.++|+||||||+|||++.++. +||+|||++......  
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--  159 (307)
T 2eva_A           82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--  159 (307)
T ss_dssp             TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred             CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence            99999999975442  4789999999999999999999865578999999999999988886 799999999754322  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                        .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......    ....+... .+..     +.+..
T Consensus       160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~-~~~~-----~~~~~  227 (307)
T 2eva_A          160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA----FRIMWAVH-NGTR-----PPLIK  227 (307)
T ss_dssp             -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH----HHHHHHHH-TTCC-----CCCBT
T ss_pred             --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH----HHHHHHHh-cCCC-----CCccc
Confidence              223468999999999999999999999999999999999999997543321    11112111 1111     11222


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..+    ..+.+++.+||+.||++|||++|+++.|+.
T Consensus       228 ~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~  260 (307)
T 2eva_A          228 NLP----KPIESLMTRCWSKDPSQRPSMEEIVKIMTH  260 (307)
T ss_dssp             TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ccC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence            222    356778899999999999999999999874

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=9e-41  Score=354.02  Aligned_cols=268  Identities=24%  Similarity=0.292  Sum_probs=208.9

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeee--------C
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHE--------K  421 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~--------~  421 (645)
                      ++|...++||+|+||.||+|++..+|+.||+|++....  ......+.+|++++.+++||||+++++++..        .
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            57888999999999999999999999999999986543  2335678899999999999999999999976        4


Q ss_pred             CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          422 KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      +..++||||++ ++|...+......+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus        97 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~  172 (351)
T 3mi9_A           97 GSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLAR  172 (351)
T ss_dssp             CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             ceEEEEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence            56899999996 57888777666779999999999999999999999   899999999999999999999999999998


Q ss_pred             cccccCC---cceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCc
Q 042831          502 LVEHAKG---SQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK  577 (645)
Q Consensus       502 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~  577 (645)
                      .......   .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......   .....+......-.
T Consensus       173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~i~~~~~~~~  249 (351)
T 3mi9_A          173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ---HQLALISQLCGSIT  249 (351)
T ss_dssp             ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCC
T ss_pred             cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCCCC
Confidence            7653222   22344678999999998876 45899999999999999999999999864432   22222222211100


Q ss_pred             --cccccC---------ccccCCCC-HHH------HHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          578 --LLEAVD---------PRLCRDFD-GQQ------IERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       578 --l~~~~d---------~~l~~~~~-~~~------~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                        .....+         ........ .+.      ...+.+++.+||+.||++|||++|+++|.|+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  316 (351)
T 3mi9_A          250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW  316 (351)
T ss_dssp             TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGG
T ss_pred             hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcC
Confidence              000000         00000001 111      13477899999999999999999999999986

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=5e-41  Score=350.41  Aligned_cols=266  Identities=22%  Similarity=0.268  Sum_probs=209.9

Q ss_pred             HHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeee----
Q 042831          345 KELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE----  420 (645)
Q Consensus       345 ~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~----  420 (645)
                      +.+....++|...+.||+|+||.||++....+++.||||++........+.+.+|++++.+++||||+++++++..    
T Consensus        22 ~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  101 (317)
T 2buj_A           22 HMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGA  101 (317)
T ss_dssp             EEEEETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETT
T ss_pred             cEEEECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCC
Confidence            3344556789999999999999999999988999999999977777777889999999999999999999999873    


Q ss_pred             CCeEEEEEEecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeec
Q 042831          421 KKELLLVYEFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF  497 (645)
Q Consensus       421 ~~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~Df  497 (645)
                      ....++||||+++|+|.+++..   .+..+++..++.++.||++||.|||+   .+|+||||||+|||++.++.+||+||
T Consensus       102 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~df  178 (317)
T 2buj_A          102 KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDL  178 (317)
T ss_dssp             EEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCC
T ss_pred             CceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEec
Confidence            3578999999999999998875   35679999999999999999999999   89999999999999999999999999


Q ss_pred             cCcccccccCCc--------ceeecccCccccCccccccCC---CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHH
Q 042831          498 GLARLVEHAKGS--------QTTVLAGTMGYMAPECATTGK---ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL  566 (645)
Q Consensus       498 Gla~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~  566 (645)
                      |++.........        ......||+.|+|||.+....   ++.++||||||+++|||++|+.||......... ..
T Consensus       179 g~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~  257 (317)
T 2buj_A          179 GSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS-VA  257 (317)
T ss_dssp             SSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC-HH
T ss_pred             CcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch-hh
Confidence            998754321111        112345799999999987554   689999999999999999999999532111110 11


Q ss_pred             HHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          567 QWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       567 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      .    ..... .    .......+    ...+.+++.+||+.||++|||+++++++|+.-.
T Consensus       258 ~----~~~~~-~----~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~  305 (317)
T 2buj_A          258 L----AVQNQ-L----SIPQSPRH----SSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ  305 (317)
T ss_dssp             H----HHHCC-------CCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred             H----Hhhcc-C----CCCccccC----CHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence            1    01110 0    00001112    246778889999999999999999999998653

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=8.2e-41  Score=359.50  Aligned_cols=268  Identities=24%  Similarity=0.329  Sum_probs=199.1

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCC--eE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKK--EL  424 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~--~~  424 (645)
                      ..++|...+.||+|+||.||+|.+..+|+.||||++...  .....+.+.+|+.++.+++ ||||+++++++...+  ..
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            457899999999999999999999999999999998643  4455677889999999997 999999999997544  78


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++|||||+ ++|..++..  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        87 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  160 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFV  160 (388)
T ss_dssp             EEEEECCS-EEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred             EEEecccC-cCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence            99999997 689888854  468999999999999999999999   899999999999999999999999999998653


Q ss_pred             ccC--------------------CcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCch
Q 042831          505 HAK--------------------GSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQV  563 (645)
Q Consensus       505 ~~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~  563 (645)
                      ...                    ........||+.|+|||++.+ ..++.++|||||||+++||++|+.||......+  
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--  238 (388)
T 3oz6_A          161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN--  238 (388)
T ss_dssp             SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--
T ss_pred             ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH--
Confidence            211                    112334679999999999876 678999999999999999999999997644221  


Q ss_pred             hHHHHHHHHhcCCccccc--c-------------------CccccCCCC------------HHHHHHHHHHHHHcCCCCC
Q 042831          564 SLLQWVWDLYGNGKLLEA--V-------------------DPRLCRDFD------------GQQIERLMIVGLWCAHPDE  610 (645)
Q Consensus       564 ~l~~~~~~~~~~~~l~~~--~-------------------d~~l~~~~~------------~~~~~~l~~l~~~Cl~~dP  610 (645)
                       ....+............  +                   .......++            ......+.+|+.+||+.||
T Consensus       239 -~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP  317 (388)
T 3oz6_A          239 -QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP  317 (388)
T ss_dssp             -HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred             -HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence             12212111111000000  0                   000000000            0112457788999999999


Q ss_pred             CCCCCHHHHHHHhccC
Q 042831          611 NLRPSIRQVIHVLNFE  626 (645)
Q Consensus       611 ~~RPs~~evl~~L~~~  626 (645)
                      ++|||++|+++|.++.
T Consensus       318 ~~R~t~~e~l~Hp~~~  333 (388)
T 3oz6_A          318 NKRISANDALKHPFVS  333 (388)
T ss_dssp             GGSCCHHHHTTSTTTT
T ss_pred             ccCCCHHHHhCCHHHH
Confidence            9999999999999864

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=3.8e-40  Score=362.22  Aligned_cols=271  Identities=21%  Similarity=0.290  Sum_probs=193.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee-----CCe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE-----KKE  423 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~-----~~~  423 (645)
                      .++|...+.||+|+||.||+|++..+++.||||++...  .....+.+.+|++++.+++||||+++++++..     .+.
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            36789999999999999999999999999999998653  34456789999999999999999999999843     357


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      +++||||+ +++|.+++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus       132 ~~lv~e~~-~~~L~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  206 (458)
T 3rp9_A          132 LYVVLEIA-DSDFKKLFRT-PVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTV  206 (458)
T ss_dssp             EEEEECCC-SEEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred             EEEEEecc-ccchhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence            89999998 5789888854 4569999999999999999999999   89999999999999999999999999999876


Q ss_pred             cccCC--------------------------cceeecccCccccCcccc-ccCCCCcchhHHHHHHHHHHHHc-------
Q 042831          504 EHAKG--------------------------SQTTVLAGTMGYMAPECA-TTGKASKESDVYSFGIVALEIAC-------  549 (645)
Q Consensus       504 ~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~t~~sDV~SfGvll~ellt-------  549 (645)
                      .....                          .......||+.|+|||++ ....++.++|||||||+||||++       
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~  286 (458)
T 3rp9_A          207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA  286 (458)
T ss_dssp             TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCS
T ss_pred             cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccc
Confidence            43221                          123445789999999976 45679999999999999999999       


Q ss_pred             ----CCCCCCCCCCC-----------------CchhHHHHHHHHhcCCccc--------------cccC----ccccCCC
Q 042831          550 ----GRKPINPKAPQ-----------------GQVSLLQWVWDLYGNGKLL--------------EAVD----PRLCRDF  590 (645)
Q Consensus       550 ----G~~pf~~~~~~-----------------~~~~l~~~~~~~~~~~~l~--------------~~~d----~~l~~~~  590 (645)
                          |+.+|......                 .....+..+.+..+.....              ..+.    ..+...+
T Consensus       287 ~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (458)
T 3rp9_A          287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERF  366 (458)
T ss_dssp             SGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGS
T ss_pred             ccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHC
Confidence                56666443210                 0011112222222111000              0000    0000000


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                       ......+.+|+.+||+.||++|||++|+++|.++..
T Consensus       367 -~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~  402 (458)
T 3rp9_A          367 -PASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE  402 (458)
T ss_dssp             -TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred             -CCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhh
Confidence             011345778899999999999999999999999863

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-40  Score=350.46  Aligned_cols=256  Identities=26%  Similarity=0.464  Sum_probs=202.3

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCC----eEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETN----SYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~----~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      .++|...+.||+|+||.||+|.+..++    ..||||.+... .......+.+|+.++.+++||||+++++++...+..+
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence            346677889999999999999987543    46999999765 3445668999999999999999999999999999999


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +||||+++|+|.+++......+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  199 (333)
T 1mqb_A          123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED  199 (333)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred             EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence            9999999999999998777789999999999999999999999   8999999999999999999999999999987653


Q ss_pred             cCCc--ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          506 AKGS--QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       506 ~~~~--~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      ....  ......++..|+|||.+....++.++|||||||++|||++ |+.||.....   ..+.    ....++...   
T Consensus       200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~---~~~~----~~~~~~~~~---  269 (333)
T 1mqb_A          200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN---HEVM----KAINDGFRL---  269 (333)
T ss_dssp             -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHH----HHHHTTCCC---
T ss_pred             ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH---HHHH----HHHHCCCcC---
Confidence            3221  1222346788999999999999999999999999999999 9999965432   1111    122222111   


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                        ....    .....+.+++.+||+.||++||++.++++.|+.
T Consensus       270 --~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  306 (333)
T 1mqb_A          270 --PTPM----DCPSAIYQLMMQCWQQERARRPKFADIVSILDK  306 (333)
T ss_dssp             --CCCT----TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             --CCcc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence              1111    123467788899999999999999999999874

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=4.8e-41  Score=351.35  Aligned_cols=267  Identities=27%  Similarity=0.435  Sum_probs=216.5

Q ss_pred             ccChHHHHHhhcCCCCCCccCcCCcEEEEEEEEc-----CCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEE
Q 042831          341 RFPYKELALATNDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQL  414 (645)
Q Consensus       341 ~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l  414 (645)
                      .+..+++....++|...+.||+|+||.||+|++.     .+++.||+|.+... .......+.+|+.++.+++||||+++
T Consensus        14 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   93 (322)
T 1p4o_A           14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL   93 (322)
T ss_dssp             CCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCE
T ss_pred             ccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeee
Confidence            3455566777889999999999999999999876     35788999999754 33455678999999999999999999


Q ss_pred             EeeeeeCCeEEEEEEecCCCChhhhhhhcC---------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeE
Q 042831          415 LGWCHEKKELLLVYEFMPNGSLDSHLFKEN---------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM  485 (645)
Q Consensus       415 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NIL  485 (645)
                      ++++.+.+..++||||+++|+|.+++....         ..+++..++.++.||+.||.|||+   ++|+||||||+||+
T Consensus        94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIl  170 (322)
T 1p4o_A           94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM  170 (322)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEE
T ss_pred             EEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEE
Confidence            999999999999999999999999986422         457999999999999999999999   89999999999999


Q ss_pred             ECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCch
Q 042831          486 LDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQV  563 (645)
Q Consensus       486 ld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~  563 (645)
                      ++.++.+||+|||+++........ ......+++.|+|||++.+..++.++||||||+++|||++ |+.||......   
T Consensus       171 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---  247 (322)
T 1p4o_A          171 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE---  247 (322)
T ss_dssp             ECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH---
T ss_pred             EcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH---
Confidence            999999999999999865433221 1223456889999999999999999999999999999999 89999754321   


Q ss_pred             hHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          564 SLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       564 ~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .+    .....++....     ....    ....+.+++.+||+.||++|||+.|++++|+..
T Consensus       248 ~~----~~~~~~~~~~~-----~~~~----~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~  297 (322)
T 1p4o_A          248 QV----LRFVMEGGLLD-----KPDN----CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  297 (322)
T ss_dssp             HH----HHHHHTTCCCC-----CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             HH----HHHHHcCCcCC-----CCCC----CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence            11    12222222211     1112    224577888999999999999999999999864

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.8e-41  Score=357.83  Aligned_cols=260  Identities=21%  Similarity=0.296  Sum_probs=209.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEc---CCCeEEEEEEeccCC----hhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCC
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFR---ETNSYIAVKRVSQGS----KQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKK  422 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~---~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~  422 (645)
                      .++|...++||+|+||.||+++..   .+++.||||+++...    ....+.+.+|++++.++ +||||+++++++...+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            357888999999999999999984   478999999986432    23345677899999999 6999999999999999


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      ..++||||+++|+|.+++... ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~  208 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKE  208 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred             eEEEEeecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence            999999999999999999654 468999999999999999999998   8999999999999999999999999999986


Q ss_pred             ccccCCcceeecccCccccCccccccC--CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATTG--KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE  580 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~  580 (645)
                      .............||+.|+|||++.++  .++.++|||||||++|||++|+.||..........  .........     
T Consensus       209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~--~~~~~~~~~-----  281 (355)
T 1vzo_A          209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA--EISRRILKS-----  281 (355)
T ss_dssp             CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHH--HHHHHHHHC-----
T ss_pred             cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHH--HHHHHHhcc-----
Confidence            654333344456799999999999863  47899999999999999999999997554332211  111111111     


Q ss_pred             ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccCC
Q 042831          581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFEA  627 (645)
Q Consensus       581 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~~  627 (645)
                        .+.+...    ....+.+++.+||+.||++||     +++|+++++++..
T Consensus       282 --~~~~~~~----~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~  327 (355)
T 1vzo_A          282 --EPPYPQE----MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  327 (355)
T ss_dssp             --CCCCCTT----SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             --CCCCCcc----cCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence              1111122    224567888999999999999     9999999999864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=8.2e-41  Score=352.29  Aligned_cols=254  Identities=24%  Similarity=0.359  Sum_probs=211.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      .++|...+.||+|+||.||++.+..+++.||+|.+...   .....+.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            35688889999999999999999999999999998654   334567889999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+++++|.+++... ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus       120 ~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  195 (335)
T 2owb_A          120 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG  195 (335)
T ss_dssp             ECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence            9999999999987543 568999999999999999999999   899999999999999999999999999998664322


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                       .......|+..|+|||++.+..++.++||||||+++|||++|+.||......      +... ....+..      .+.
T Consensus       196 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~-~~~~~~~------~~~  261 (335)
T 2owb_A          196 -ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK------ETYL-RIKKNEY------SIP  261 (335)
T ss_dssp             -CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHH-HHHHTCC------CCC
T ss_pred             -ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH------HHHH-HHhcCCC------CCC
Confidence             2234467899999999999988999999999999999999999999753321      1111 1111111      111


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ...+    ..+.+++.+||+.||++|||++|++++.++.
T Consensus       262 ~~~~----~~~~~li~~~l~~dp~~Rps~~ell~~~~~~  296 (335)
T 2owb_A          262 KHIN----PVAASLIQKMLQTDPTARPTINELLNDEFFT  296 (335)
T ss_dssp             TTSC----HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             ccCC----HHHHHHHHHHccCChhHCcCHHHHhcCcccc
Confidence            1222    3566788999999999999999999998864

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=4e-41  Score=369.31  Aligned_cols=260  Identities=29%  Similarity=0.461  Sum_probs=205.5

Q ss_pred             HHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE
Q 042831          345 KELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       345 ~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~  424 (645)
                      ..+....++|...++||+|+||.||+|.+.. +..||||+++... ...++|.+|++++.+++||||+++++++.+ +..
T Consensus       177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~  253 (452)
T 1fmk_A          177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI  253 (452)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             cccccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-Cce
Confidence            3344556778889999999999999999976 5679999997543 235689999999999999999999999876 678


Q ss_pred             EEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          425 LLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      ++||||+++|+|.+++... +..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus       254 ~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  330 (452)
T 1fmk_A          254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI  330 (452)
T ss_dssp             EEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC--
T ss_pred             EEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceec
Confidence            9999999999999999753 4568999999999999999999999   89999999999999999999999999999876


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      ............++..|+|||++..+.++.++|||||||++|||++ |+.||......   ...    .....+...   
T Consensus       331 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~---~~~----~~i~~~~~~---  400 (452)
T 1fmk_A          331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVL----DQVERGYRM---  400 (452)
T ss_dssp             ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHH----HHHHTTCCC---
T ss_pred             CCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH---HHH----HHHHcCCCC---
Confidence            5433223334457789999999999999999999999999999999 99999754321   111    222222111   


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                        .    .+....+.+.+++.+||+.||++|||++++++.|+.-
T Consensus       401 --~----~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~  438 (452)
T 1fmk_A          401 --P----CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  438 (452)
T ss_dssp             --C----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred             --C----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence              1    1112234677888999999999999999999999753

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=5.1e-41  Score=349.94  Aligned_cols=259  Identities=21%  Similarity=0.292  Sum_probs=201.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC----e
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK----E  423 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~----~  423 (645)
                      .++|...+.||+|+||.||++++..+++.||||++...   .....+.+.+|+.++.+++||||+++++++....    .
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            46788899999999999999999999999999999764   3344567899999999999999999999987654    3


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      .++||||+++++|.+++... ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~  166 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAI  166 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred             cEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence            49999999999999998654 468999999999999999999999   89999999999999999999999999999866


Q ss_pred             cccCC--cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc
Q 042831          504 EHAKG--SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA  581 (645)
Q Consensus       504 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~  581 (645)
                      .....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||......      .............. 
T Consensus       167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~~~~~~-  239 (311)
T 3ork_A          167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV------SVAYQHVREDPIPP-  239 (311)
T ss_dssp             ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHCCCCCH-
T ss_pred             cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhcCCCCCc-
Confidence            44322  2233457899999999999999999999999999999999999999754321      11122222211110 


Q ss_pred             cCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       582 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                        ......+    ...+..++.+||+.||++||++.+++++.+..
T Consensus       240 --~~~~~~~----~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          240 --SARHEGL----SADLDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             --HHHSTTC----CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             --ccccCCC----CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence              0001112    24567888999999999999888888776643

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=7.5e-41  Score=351.47  Aligned_cols=256  Identities=24%  Similarity=0.407  Sum_probs=202.4

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeE----EEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSY----IAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~----vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      .++|...++||+|+||.||+|.+..+++.    ||+|.+... .....+.+.+|+.++.+++||||++++++|.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            46788899999999999999999877764    577777543 3456678999999999999999999999998765 78


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +|+||+++|+|.+++......+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~  169 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  169 (327)
T ss_dssp             EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence            9999999999999998877789999999999999999999999   8999999999999999999999999999987643


Q ss_pred             cCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          506 AKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       506 ~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.......   +...    ...+...    
T Consensus       170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~~----~~~~~~~----  238 (327)
T 3lzb_A          170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSI----LEKGERL----  238 (327)
T ss_dssp             ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHH----HHTTCCC----
T ss_pred             ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHH----HHcCCCC----
Confidence            322 12233456788999999999999999999999999999999 999997654332   1111    1111111    


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                       ....    .....+.+++.+||+.||++||+++|+++.|+.-
T Consensus       239 -~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  276 (327)
T 3lzb_A          239 -PQPP----ICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM  276 (327)
T ss_dssp             -CCCT----TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -CCCc----cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence             1111    1223577888999999999999999999999853

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=7.9e-41  Score=353.51  Aligned_cols=257  Identities=21%  Similarity=0.321  Sum_probs=207.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .++|...+.||+|+||.||++.+..+++.||||.+.....    ...+|++++.++ +||||+++++++.+++..++|||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            4578889999999999999999999999999999975532    234688888888 79999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC----CcEEEeeccCcccccc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN----FNAKIGDFGLARLVEH  505 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~----~~~kl~DfGla~~~~~  505 (645)
                      |+++|+|.+++... ..+++..+..++.||+.||.|||+   .+|+||||||+|||+.++    +.+||+|||+++....
T Consensus        97 ~~~gg~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~  172 (342)
T 2qr7_A           97 LMKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA  172 (342)
T ss_dssp             CCCSCBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred             CCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence            99999999988644 568999999999999999999999   899999999999998433    3599999999986543


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      .. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..........+..    ....+...  ....
T Consensus       173 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~----~i~~~~~~--~~~~  245 (342)
T 2qr7_A          173 EN-GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILA----RIGSGKFS--LSGG  245 (342)
T ss_dssp             TT-CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHH----HHHHCCCC--CCST
T ss_pred             CC-CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHH----HHccCCcc--cCcc
Confidence            32 23344678999999999988889999999999999999999999998543332222222    22222221  1111


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ....    ....+.+++.+||+.||++|||+.|+++|.|+.
T Consensus       246 ~~~~----~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~  282 (342)
T 2qr7_A          246 YWNS----VSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIV  282 (342)
T ss_dssp             TTTT----SCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred             cccc----CCHHHHHHHHHHCCCChhHCcCHHHHhcCCeec
Confidence            1111    224567888999999999999999999999863

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=1e-40  Score=367.09  Aligned_cols=257  Identities=25%  Similarity=0.401  Sum_probs=212.8

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      .++|...+.||+|+||.||+|++..+|+.||||++....   ......+.+|+.+++.++||||+++++++...+..++|
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            357888999999999999999999999999999986542   22356788999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+++|+|.+++.+ ...+++..++.++.||+.||.|||+   .+|+||||||+|||++.++++||+|||+++..... 
T Consensus        95 ~E~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~-  169 (476)
T 2y94_A           95 MEYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-  169 (476)
T ss_dssp             EECCSSEEHHHHTTS-SSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT-
T ss_pred             EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhcccc-
Confidence            999999999999864 4569999999999999999999998   89999999999999999999999999999876432 


Q ss_pred             CcceeecccCccccCccccccCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~-t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                       .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......   .+..    ...++...      .
T Consensus       170 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~---~~~~----~i~~~~~~------~  235 (476)
T 2y94_A          170 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP---TLFK----KICDGIFY------T  235 (476)
T ss_dssp             -CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH---HHHH----HHHTTCCC------C
T ss_pred             -ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH---HHHH----HHhcCCcC------C
Confidence             22344579999999999988765 78999999999999999999999754321   1221    12222110      1


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLP  630 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  630 (645)
                      ....+    ..+.+++.+||+.||++|||++|+++|.++....|
T Consensus       236 p~~~s----~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~~  275 (476)
T 2y94_A          236 PQYLN----PSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLP  275 (476)
T ss_dssp             CTTCC----HHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTCC
T ss_pred             CccCC----HHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhcCc
Confidence            11122    35677889999999999999999999998865444

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=2.6e-40  Score=342.35  Aligned_cols=261  Identities=26%  Similarity=0.377  Sum_probs=206.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEE----EcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC--CeE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGF----FRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KEL  424 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~----~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~--~~~  424 (645)
                      ++|...++||+|+||.||+|+    ...+++.||+|++... .....+.+.+|++++.+++||||+++++++...  +..
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            457788999999999999999    4567899999999754 334567899999999999999999999999876  678


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++||||+++++|.+++......+++..++.++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||+++...
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  177 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE  177 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred             EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECccccccccc
Confidence            99999999999999997777789999999999999999999999   899999999999999999999999999998765


Q ss_pred             ccCCc--ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCC--------CCCchhHHHHHHHHhc
Q 042831          505 HAKGS--QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKA--------PQGQVSLLQWVWDLYG  574 (645)
Q Consensus       505 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~--------~~~~~~l~~~~~~~~~  574 (645)
                      .....  ......+|..|+|||.+.+..++.++||||||+++|||++|+.|+....        +...............
T Consensus       178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (302)
T 4e5w_A          178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK  257 (302)
T ss_dssp             TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred             CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence            43321  2234567888999999999899999999999999999999999864221        0000011111111111


Q ss_pred             CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          575 NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       575 ~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .+..     .    ..+......+.+++.+||+.||++|||++|+++.|+
T Consensus       258 ~~~~-----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~  298 (302)
T 4e5w_A          258 EGKR-----L----PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE  298 (302)
T ss_dssp             TTCC-----C----CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             ccCC-----C----CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            1111     1    111122356778899999999999999999999986

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.2e-40  Score=355.25  Aligned_cols=265  Identities=15%  Similarity=0.159  Sum_probs=206.2

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCC-----CeEEEEEEeccCChhh-----------HHHHHHHHHHHHhcCCCCccE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRET-----NSYIAVKRVSQGSKQG-----------IKEYASEVKIISRLRHRNLVQ  413 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~-----~~~vavK~~~~~~~~~-----------~~~~~~Ei~~l~~l~H~nlv~  413 (645)
                      ..++|...++||+|+||.||+|.+..+     ++.||||++.......           ...+..|+..+..++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            456899999999999999999998764     5789999987654321           123445666777888999999


Q ss_pred             EEeeeeeC----CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC--
Q 042831          414 LLGWCHEK----KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD--  487 (645)
Q Consensus       414 l~~~~~~~----~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld--  487 (645)
                      +++++...    ...++||||+ +++|.+++......+++..++.|+.||+.||.|||+   .+|+||||||+|||++  
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~~  188 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYK  188 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEESS
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEecC
Confidence            99998764    4589999999 999999998777789999999999999999999999   8999999999999998  


Q ss_pred             CCCcEEEeeccCcccccccCCc------ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCC
Q 042831          488 SNFNAKIGDFGLARLVEHAKGS------QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQG  561 (645)
Q Consensus       488 ~~~~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~  561 (645)
                      .++.+||+|||+++........      ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus       189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~  268 (364)
T 3op5_A          189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP  268 (364)
T ss_dssp             CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred             CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence            8899999999999876433211      1233569999999999999999999999999999999999999998533221


Q ss_pred             chhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          562 QVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       562 ~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        ....+..... ...+.+.+++.+....   ....+..++..|++.||++||+++++++.|+
T Consensus       269 --~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~  325 (364)
T 3op5_A          269 --KYVRDSKIRY-RENIASLMDKCFPAAN---APGEIAKYMETVKLLDYTEKPLYENLRDILL  325 (364)
T ss_dssp             --HHHHHHHHHH-HHCHHHHHHHHSCTTC---CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred             --HHHHHHHHHh-hhhHHHHHHHhccccc---CHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence              1222221111 1122333333322111   1245677888999999999999999999986

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=4.3e-41  Score=353.19  Aligned_cols=259  Identities=23%  Similarity=0.290  Sum_probs=193.4

Q ss_pred             HHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCCccEEEeeee----
Q 042831          345 KELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLGWCH----  419 (645)
Q Consensus       345 ~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~----  419 (645)
                      +.+.....+|...++||+|+||.||+|++..+++.||||++........+.+.+|+.++.+++ ||||+++++++.    
T Consensus        21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~  100 (337)
T 3ll6_A           21 QTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE  100 (337)
T ss_dssp             CEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTT
T ss_pred             ceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccc
Confidence            344555668899999999999999999999899999999997777777788999999999996 999999999984    


Q ss_pred             ----eCCeEEEEEEecCCCChhhhhhh--cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCC--eeeccCCCCCeEECCCCc
Q 042831          420 ----EKKELLLVYEFMPNGSLDSHLFK--ENSLLTWEFRYKIAQDLASGLLYLQEEWEQC--VVHRDIKSSNIMLDSNFN  491 (645)
Q Consensus       420 ----~~~~~~lV~Ey~~~gsL~~~l~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dlkp~NILld~~~~  491 (645)
                          .....++||||+. |+|.+++..  ....+++..++.++.||+.||.|||+   .+  |+||||||+|||++.++.
T Consensus       101 ~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~  176 (337)
T 3ll6_A          101 ESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGT  176 (337)
T ss_dssp             TSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSC
T ss_pred             ccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCC
Confidence                3456899999995 799988864  45679999999999999999999998   77  999999999999999999


Q ss_pred             EEEeeccCcccccccCCc-----------ceeecccCccccCcccc---ccCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Q 042831          492 AKIGDFGLARLVEHAKGS-----------QTTVLAGTMGYMAPECA---TTGKASKESDVYSFGIVALEIACGRKPINPK  557 (645)
Q Consensus       492 ~kl~DfGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~---~~~~~t~~sDV~SfGvll~elltG~~pf~~~  557 (645)
                      +||+|||+++........           ......||+.|+|||++   .+..++.++|||||||++|||++|+.||...
T Consensus       177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  256 (337)
T 3ll6_A          177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG  256 (337)
T ss_dssp             EEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             EEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcch
Confidence            999999999876432221           11234689999999998   5667899999999999999999999999743


Q ss_pred             CCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          558 APQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       558 ~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ....   ..        .+......    ...    ....+..++..||+.||++|||++|++++|+.-
T Consensus       257 ~~~~---~~--------~~~~~~~~----~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~  306 (337)
T 3ll6_A          257 AKLR---IV--------NGKYSIPP----HDT----QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI  306 (337)
T ss_dssp             --------------------CCCCT----TCC----SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             hHHH---hh--------cCcccCCc----ccc----cchHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            3211   00        01110000    011    112366788999999999999999999999853

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=7.5e-41  Score=360.14  Aligned_cols=257  Identities=22%  Similarity=0.325  Sum_probs=202.5

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcC--CCCccEEEeeeeeCCeEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLR--HRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~--H~nlv~l~~~~~~~~~~~  425 (645)
                      ...+|...+.||+|+||.||++.+.. ++.||||++...  .....+.+.+|+.++.+++  ||||+++++++..++..+
T Consensus        54 ~~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~  132 (390)
T 2zmd_A           54 KGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY  132 (390)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             cCCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEE
Confidence            34569999999999999999999875 889999998654  3456678999999999997  599999999999999999


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +||| +.+++|.+++... ..+++..+..++.||+.||.|||+   .+|+||||||+|||++ ++.+||+|||+++....
T Consensus       133 lv~E-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~  206 (390)
T 2zmd_A          133 MVME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  206 (390)
T ss_dssp             EEEE-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred             EEEe-cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence            9999 6689999998654 478999999999999999999998   8999999999999996 57899999999987643


Q ss_pred             cCCc-ceeecccCccccCcccccc-----------CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHh
Q 042831          506 AKGS-QTTVLAGTMGYMAPECATT-----------GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY  573 (645)
Q Consensus       506 ~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~  573 (645)
                      .... ......||+.|+|||++.+           ..++.++|||||||++|||++|+.||......     ........
T Consensus       207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-----~~~~~~~~  281 (390)
T 2zmd_A          207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHAII  281 (390)
T ss_dssp             -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-----HHHHHHHH
T ss_pred             CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-----HHHHHHHh
Confidence            3222 2344679999999999865           46899999999999999999999999743321     11111111


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                               ++.....++......+.+++.+||+.||++|||+.|++++.++..
T Consensus       282 ---------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  326 (390)
T 2zmd_A          282 ---------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  326 (390)
T ss_dssp             ---------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             ---------CccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccc
Confidence                     111111111111245678889999999999999999999998753

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=5.7e-40  Score=338.44  Aligned_cols=261  Identities=20%  Similarity=0.288  Sum_probs=206.7

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeee-eeCCeEEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVY  428 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~-~~~~~~~lV~  428 (645)
                      ..++|...+.||+|+||.||+|++..+++.||||.+.....  .+++.+|++++.+++|++++..++++ ...+..++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            45789999999999999999999999999999998754432  23578899999999988877766665 5677889999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE---CCCCcEEEeeccCcccccc
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML---DSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl---d~~~~~kl~DfGla~~~~~  505 (645)
                      ||+ +++|.+++......+++..++.++.||+.||.|||+   .+|+||||||+|||+   +.++.+||+|||+++....
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~  160 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  160 (296)
T ss_dssp             ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred             Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence            999 999999997667789999999999999999999999   899999999999999   7899999999999987654


Q ss_pred             cCC------cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccc
Q 042831          506 AKG------SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL  579 (645)
Q Consensus       506 ~~~------~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~  579 (645)
                      ...      .......||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+........  
T Consensus       161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--  238 (296)
T 4hgt_A          161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP--  238 (296)
T ss_dssp             TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC--
T ss_pred             cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch--
Confidence            332      122346789999999999999999999999999999999999999986554433333322221110000  


Q ss_pred             cccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       580 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                         .+.+...++    ..+.+++..||+.||++|||++++++.|+.
T Consensus       239 ---~~~~~~~~~----~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (296)
T 4hgt_A          239 ---IEVLCKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRN  277 (296)
T ss_dssp             ---HHHHTTTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred             ---hhhhhccCC----HHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Confidence               011112222    467788899999999999999999999874

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.5e-40  Score=370.14  Aligned_cols=259  Identities=24%  Similarity=0.335  Sum_probs=213.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      .++|...+.||+|+||.||+|++..+|+.||+|++....   ....+.+.+|++++.+++||||+++++++...+.+++|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            367888999999999999999999999999999996532   23456788999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhc---CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          428 YEFMPNGSLDSHLFKE---NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      |||+++|+|..++...   ...+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            9999999999998653   3469999999999999999999999   899999999999999999999999999998664


Q ss_pred             ccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc-hhHHHHHHHHhcCCccccccC
Q 042831          505 HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ-VSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       505 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~-~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+...    ...+..     
T Consensus       341 ~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~----i~~~~~-----  410 (543)
T 3c4z_A          341 AGQ-TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR----VLEQAV-----  410 (543)
T ss_dssp             TTC-CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHH----HHHCCC-----
T ss_pred             CCC-cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHH----Hhhccc-----
Confidence            332 223345799999999999999999999999999999999999999986543222 111111    111111     


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHhccCC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSI-----RQVIHVLNFEA  627 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~L~~~~  627 (645)
                       .+...+    ...+..++.+||+.||++||++     +++++|.++..
T Consensus       411 -~~p~~~----s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~  454 (543)
T 3c4z_A          411 -TYPDKF----SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD  454 (543)
T ss_dssp             -CCCTTS----CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred             -CCCccc----CHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence             111122    2456778899999999999964     88999998753

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=9.5e-40  Score=336.47  Aligned_cols=253  Identities=27%  Similarity=0.422  Sum_probs=205.1

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee----CCeEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE----KKELLL  426 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~----~~~~~l  426 (645)
                      .|...+.||+|+||.||+|.+..++..||+|.+...  .....+.+.+|+.++.+++||||+++++++..    ....++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            466778899999999999999999999999998654  44556789999999999999999999998865    456899


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCC--eeeccCCCCCeEEC-CCCcEEEeeccCcccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC--VVHRDIKSSNIMLD-SNFNAKIGDFGLARLV  503 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dlkp~NILld-~~~~~kl~DfGla~~~  503 (645)
                      ||||+++++|.+++... ..+++..++.++.||+.||.|||+   .+  ++||||||+|||++ .++.+||+|||++...
T Consensus       107 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~  182 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  182 (290)
T ss_dssp             EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             EEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence            99999999999999653 568999999999999999999998   77  99999999999998 7899999999999754


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ..   .......|++.|+|||++. +.++.++||||||+++|||++|+.||......  .   . .......+.....  
T Consensus       183 ~~---~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~---~-~~~~~~~~~~~~~--  250 (290)
T 1t4h_A          183 RA---SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA--A---Q-IYRRVTSGVKPAS--  250 (290)
T ss_dssp             CT---TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH--H---H-HHHHHTTTCCCGG--
T ss_pred             cc---cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH--H---H-HHHHHhccCCccc--
Confidence            32   2334467999999999876 46899999999999999999999999753321  1   1 1122222211111  


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                        .....    ...+.+++..||+.||++|||++|+++|.++..
T Consensus       251 --~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          251 --FDKVA----IPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             --GGGCC----CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             --cCCCC----CHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence              11111    235778889999999999999999999998763

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1.2e-40  Score=341.52  Aligned_cols=250  Identities=23%  Similarity=0.359  Sum_probs=205.3

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      .++|...+.||+|+||.||+|.+..+++.||+|++...  ......++.+|+..+.++ +||||+++++++.+++..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            46788899999999999999999989999999998754  344567888999999999 899999999999999999999


Q ss_pred             EEecCCCChhhhhhhc---CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC----------------
Q 042831          428 YEFMPNGSLDSHLFKE---NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS----------------  488 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~----------------  488 (645)
                      |||+++++|.+++...   ...+++..++.++.||+.||.|||+   ++|+||||||+|||++.                
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~  166 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW  166 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC-----------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence            9999999999999753   3678999999999999999999999   89999999999999984                


Q ss_pred             ---CCcEEEeeccCcccccccCCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchh
Q 042831          489 ---NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVS  564 (645)
Q Consensus       489 ---~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~  564 (645)
                         ...+||+|||++.......     ...||+.|+|||.+.+. .++.++|||||||+++||++|+.++....      
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------  235 (289)
T 1x8b_A          167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------  235 (289)
T ss_dssp             ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------
T ss_pred             cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------
Confidence               4479999999998654322     23589999999998776 56789999999999999999998764221      


Q ss_pred             HHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          565 LLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       565 l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      .    +....++..     +.+...++    ..+.+++.+||+.||++|||++|++++.++..
T Consensus       236 ~----~~~~~~~~~-----~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  285 (289)
T 1x8b_A          236 Q----WHEIRQGRL-----PRIPQVLS----QEFTELLKVMIHPDPERRPSAMALVKHSVLLS  285 (289)
T ss_dssp             H----HHHHHTTCC-----CCCSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTCTTC--
T ss_pred             H----HHHHHcCCC-----CCCCcccC----HHHHHHHHHHhCCCcccCCCHHHHhhChHhhh
Confidence            1    112222222     12222222    45678889999999999999999999998753

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=9e-41  Score=341.98  Aligned_cols=257  Identities=28%  Similarity=0.459  Sum_probs=207.5

Q ss_pred             HHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          347 LALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       347 l~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .....++|...+.||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|++++.+++||||+++++++.. +..++
T Consensus         8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~   84 (279)
T 1qpc_A            8 WEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI   84 (279)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred             cccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEE
Confidence            3444567888999999999999999986 46789999986543 345688999999999999999999999864 56899


Q ss_pred             EEEecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          427 VYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      ||||+++++|.+++.... ..+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++....
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  161 (279)
T 1qpc_A           85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIED  161 (279)
T ss_dssp             EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence            999999999999996532 368999999999999999999999   8999999999999999999999999999987654


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      ..........++..|+|||.+.++.++.++||||||++++||++ |+.||......   .+..    ...++.     ..
T Consensus       162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~----~~~~~~-----~~  229 (279)
T 1qpc_A          162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP---EVIQ----NLERGY-----RM  229 (279)
T ss_dssp             SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHH----HHHTTC-----CC
T ss_pred             cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH---HHHH----HHhccc-----CC
Confidence            33222333456788999999998889999999999999999999 99999754321   1111    111221     11


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .....+    .+.+.+++..|++.||++|||+.++++.|+.
T Consensus       230 ~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  266 (279)
T 1qpc_A          230 VRPDNC----PEELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (279)
T ss_dssp             CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCcccc----cHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence            111122    2467788899999999999999999999874

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=9.9e-41  Score=347.65  Aligned_cols=266  Identities=26%  Similarity=0.380  Sum_probs=214.1

Q ss_pred             cChHHHHHhhcCCCCCCccCcCCcEEEEEEEEc-----CCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCCccEE
Q 042831          342 FPYKELALATNDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGS-KQGIKEYASEVKIISRL-RHRNLVQL  414 (645)
Q Consensus       342 ~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nlv~l  414 (645)
                      +...++....++|...+.||+|+||.||+|.+.     .+++.||||++.... ....+.+.+|+.++.++ +||||+++
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            445566667789999999999999999999853     467899999997653 34567899999999999 69999999


Q ss_pred             EeeeeeCC-eEEEEEEecCCCChhhhhhhcCC---------------CCCHHHHHHHHHHHHHHHHHHHhhcCCCeeecc
Q 042831          415 LGWCHEKK-ELLLVYEFMPNGSLDSHLFKENS---------------LLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRD  478 (645)
Q Consensus       415 ~~~~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~---------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~D  478 (645)
                      ++++...+ ..++||||+++|+|.+++.....               .+++..++.++.||++||.|||+   .+|+|||
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~d  173 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD  173 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCccccc
Confidence            99987754 58999999999999999975433               28999999999999999999999   8999999


Q ss_pred             CCCCCeEECCCCcEEEeeccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCC
Q 042831          479 IKSSNIMLDSNFNAKIGDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINP  556 (645)
Q Consensus       479 lkp~NILld~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~  556 (645)
                      |||+||+++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus       174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~  253 (316)
T 2xir_A          174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  253 (316)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence            999999999999999999999986543322 22334567889999999999999999999999999999998 9999975


Q ss_pred             CCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          557 KAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       557 ~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .....  .+    ......+..     .......    ...+.+++.+||+.||++|||++|++++|+.
T Consensus       254 ~~~~~--~~----~~~~~~~~~-----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  307 (316)
T 2xir_A          254 VKIDE--EF----CRRLKEGTR-----MRAPDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  307 (316)
T ss_dssp             CCCSH--HH----HHHHHHTCC-----CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cchhH--HH----HHHhccCcc-----CCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            44321  11    111111211     1111112    2457788899999999999999999999974

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.1e-39  Score=336.51  Aligned_cols=260  Identities=20%  Similarity=0.289  Sum_probs=209.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeee-eeCCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWC-HEKKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~-~~~~~~~lV~E  429 (645)
                      .++|...+.||+|+||.||+|++..+++.||||++.....  .+++.+|+.++.+++|++++..+.++ ...+..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            4688999999999999999999988999999999865433  24688999999999998876666655 56778899999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE---CCCCcEEEeeccCccccccc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML---DSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl---d~~~~~kl~DfGla~~~~~~  506 (645)
                      |+ +++|.+++......+++..++.++.||+.||.|||+   ++|+||||||+|||+   +.++.+||+|||+++.....
T Consensus        86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~  161 (296)
T 3uzp_A           86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  161 (296)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred             ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence            99 999999997667789999999999999999999999   899999999999999   48889999999999876543


Q ss_pred             CCc------ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc
Q 042831          507 KGS------QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE  580 (645)
Q Consensus       507 ~~~------~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~  580 (645)
                      ...      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+........   
T Consensus       162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---  238 (296)
T 3uzp_A          162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP---  238 (296)
T ss_dssp             TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC---
T ss_pred             ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc---
Confidence            321      12446799999999999999999999999999999999999999986554333333322221111000   


Q ss_pred             ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       581 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                        .+.+...++    ..+.+++.+||+.||++|||++++++.|+.
T Consensus       239 --~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~  277 (296)
T 3uzp_A          239 --IEVLCKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRN  277 (296)
T ss_dssp             --HHHHTTTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred             --hHHHHhhCC----HHHHHHHHHHHhcCcCcCCCHHHHHHHHHH
Confidence              011112222    457788899999999999999999999974

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=2e-40  Score=348.49  Aligned_cols=271  Identities=23%  Similarity=0.269  Sum_probs=201.4

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh--hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK--QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      ....++|...++||+|+||.||+|++..+++.||||++.....  ...+.+.+|++++++++||||+++++++.+++..+
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            3445689999999999999999999999999999999875432  33567789999999999999999999999999999


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE-----CCCCcEEEeeccCc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML-----DSNFNAKIGDFGLA  500 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl-----d~~~~~kl~DfGla  500 (645)
                      +||||++ |+|.+++... ..+++..++.++.||+.||.|||+   .+|+||||||+|||+     +.++.+||+|||++
T Consensus       110 lv~e~~~-~~L~~~~~~~-~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a  184 (329)
T 3gbz_A          110 LIFEYAE-NDLKKYMDKN-PDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA  184 (329)
T ss_dssp             EEEECCS-EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred             EEEecCC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence            9999997 5999988654 458999999999999999999999   899999999999999     45566999999999


Q ss_pred             ccccccCCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccc
Q 042831          501 RLVEHAKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL  579 (645)
Q Consensus       501 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~  579 (645)
                      +...... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||......   .....+........-.
T Consensus       185 ~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~~~~~~~~~~~~  260 (329)
T 3gbz_A          185 RAFGIPI-RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI---DQLFKIFEVLGLPDDT  260 (329)
T ss_dssp             HHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHHCCCCTT
T ss_pred             cccCCcc-cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH---HHHHHHHHHhCCCchh
Confidence            8664322 223445689999999998875 4899999999999999999999999754322   1222222221110000


Q ss_pred             c---------c--cCccccCCCCHH-----HHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          580 E---------A--VDPRLCRDFDGQ-----QIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       580 ~---------~--~d~~l~~~~~~~-----~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      .         .  ..+.........     ....+.+++.+||+.||++|||++|+++|.++..
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  324 (329)
T 3gbz_A          261 TWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSH  324 (329)
T ss_dssp             TSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred             hhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCC
Confidence            0         0  000000000000     1256778899999999999999999999999863

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=2.5e-40  Score=340.92  Aligned_cols=260  Identities=28%  Similarity=0.493  Sum_probs=197.7

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ...++|...++||+|+||.||+|++..   .||+|.+...  .....+.+.+|++++++++||||+++++++ ..+..++
T Consensus        21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l   96 (289)
T 3og7_A           21 IPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI   96 (289)
T ss_dssp             CCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred             cCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence            345678999999999999999998753   4999998654  345567899999999999999999999976 4566899


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++++|.+++......+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus        97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  173 (289)
T 3og7_A           97 VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW  173 (289)
T ss_dssp             EEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred             EEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceeccccccc
Confidence            999999999999997777789999999999999999999999   89999999999999999999999999999765432


Q ss_pred             C-CcceeecccCccccCccccc---cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          507 K-GSQTTVLAGTMGYMAPECAT---TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       507 ~-~~~~~~~~gt~~y~aPE~~~---~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      . ........||+.|+|||.+.   ...++.++||||||+++|||++|+.||......+  .    +......+......
T Consensus       174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~----~~~~~~~~~~~~~~  247 (289)
T 3og7_A          174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD--Q----IIEMVGRGSLSPDL  247 (289)
T ss_dssp             ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH--H----HHHHHHHTSCCCCT
T ss_pred             cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH--H----HHHHhcccccCcch
Confidence            2 22234457899999999986   5668899999999999999999999997544321  1    22222222221111


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      . .+...    ....+.+++..||+.||++|||++|+++.|+.-
T Consensus       248 ~-~~~~~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l  286 (289)
T 3og7_A          248 S-KVRSN----CPKRMKRLMAECLKKKRDERPSFPRILAEIEEL  286 (289)
T ss_dssp             T-SSCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             h-hcccc----CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            1 11122    235677888999999999999999999999753

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=1.7e-40  Score=343.75  Aligned_cols=260  Identities=22%  Similarity=0.356  Sum_probs=207.8

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ..++|...+.||+|+||.||+|.+..+++.||+|.+........+.+.+|++++.+++||||+++++++...+..++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            34678889999999999999999999999999999987766677889999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+++++|.+++......+++..+..++.||+.||.|||+   .+++||||||+||+++.++.+||+|||++....... .
T Consensus        97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~  172 (302)
T 2j7t_A           97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-Q  172 (302)
T ss_dssp             CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-H
T ss_pred             eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccccccc-c
Confidence            999999999987767789999999999999999999999   899999999999999999999999999876432111 1


Q ss_pred             ceeecccCccccCcccc-----ccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          510 QTTVLAGTMGYMAPECA-----TTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~-----~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      ......|+..|+|||++     ....++.++||||||+++|||++|+.||......      ......... .......+
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~-~~~~~~~~  245 (302)
T 2j7t_A          173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM------RVLLKIAKS-DPPTLLTP  245 (302)
T ss_dssp             C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHS-CCCCCSSG
T ss_pred             ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH------HHHHHHhcc-CCcccCCc
Confidence            12335689999999988     3667899999999999999999999999754321      111111111 11111111


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                         .    .....+..++.+||+.||++|||++|++++.++..
T Consensus       246 ---~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  281 (302)
T 2j7t_A          246 ---S----KWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSS  281 (302)
T ss_dssp             ---G----GSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTT
T ss_pred             ---c----ccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhh
Confidence               1    11245778889999999999999999999998764

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.8e-40  Score=364.89  Aligned_cols=265  Identities=21%  Similarity=0.231  Sum_probs=203.8

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC------
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK------  421 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~------  421 (645)
                      ..++|...++||+|+||.||+|++..+++.||||++...  .....+++.+|+.++++++||||+++++++...      
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  139 (464)
T 3ttj_A           60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF  139 (464)
T ss_dssp             EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence            357899999999999999999999999999999999754  445567889999999999999999999998654      


Q ss_pred             CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          422 KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      ...++||||++++ |.+.+.   ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       140 ~~~~lv~E~~~~~-l~~~~~---~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~  212 (464)
T 3ttj_A          140 QDVYLVMELMDAN-LCQVIQ---MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  212 (464)
T ss_dssp             CEEEEEEECCSEE-HHHHHT---SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred             CeEEEEEeCCCCC-HHHHHh---hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence            4679999999764 555553   248999999999999999999999   899999999999999999999999999998


Q ss_pred             cccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC-----
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG-----  576 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~-----  576 (645)
                      .....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+.+..+..     
T Consensus       213 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~---~~~~~i~~~lg~p~~~~~  287 (464)
T 3ttj_A          213 TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIEQLGTPCPEFM  287 (464)
T ss_dssp             ----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHHCSCCHHHH
T ss_pred             ecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHhcCCCCHHHH
Confidence            65432  2334567999999999999999999999999999999999999999754422   1111111111110     


Q ss_pred             ---------------c-----cccccCccccCCC---CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          577 ---------------K-----LLEAVDPRLCRDF---DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       577 ---------------~-----l~~~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                                     .     +.......+....   .......+.+|+.+||+.||++|||++|+++|.|+.
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~  360 (464)
T 3ttj_A          288 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN  360 (464)
T ss_dssp             TTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTG
T ss_pred             HHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhh
Confidence                           0     0000000000000   111246688999999999999999999999999985

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1.5e-40  Score=341.41  Aligned_cols=252  Identities=23%  Similarity=0.361  Sum_probs=209.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|+||.||+|++..+++.||+|.+....   ....+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            56888999999999999999999999999999986432   223467889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++++|.+++... ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++......  
T Consensus        94 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~--  167 (284)
T 2vgo_A           94 EFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL--  167 (284)
T ss_dssp             CCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS--
T ss_pred             EeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCccc--
Confidence            999999999998654 468999999999999999999998   89999999999999999999999999998754322  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                       ......|++.|+|||.+.+..++.++||||||+++|||++|+.||......   ...    .......      ..+..
T Consensus       168 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~----~~~~~~~------~~~~~  233 (284)
T 2vgo_A          168 -RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT---ETH----RRIVNVD------LKFPP  233 (284)
T ss_dssp             -CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---HHH----HHHHTTC------CCCCT
T ss_pred             -ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh---HHH----HHHhccc------cCCCC
Confidence             223457899999999999989999999999999999999999999753321   111    1111111      11112


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ..    ...+.+++.+||+.||++||+++|++++.++..
T Consensus       234 ~~----~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~  268 (284)
T 2vgo_A          234 FL----SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA  268 (284)
T ss_dssp             TS----CHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHH
T ss_pred             cC----CHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHh
Confidence            22    245678889999999999999999999998753

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=5.2e-40  Score=338.78  Aligned_cols=258  Identities=26%  Similarity=0.396  Sum_probs=206.9

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|.....||+|+||.||+|.+..+++.||+|.+........+.+.+|+.++.+++||||+++++++...+..++||||+
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            34566779999999999999999999999999998776666788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcC--CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC-CCcEEEeeccCcccccccCC
Q 042831          432 PNGSLDSHLFKEN--SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       432 ~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~-~~~~kl~DfGla~~~~~~~~  508 (645)
                      ++++|.+++....  ..+++..+..++.|++.||.|||+   .+++|+||||+||+++. ++.+||+|||+++...... 
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-  177 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-  177 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence            9999999997643  356789999999999999999999   89999999999999987 8999999999998654321 


Q ss_pred             cceeecccCccccCccccccCC--CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          509 SQTTVLAGTMGYMAPECATTGK--ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~--~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                      .......|++.|+|||++..+.  ++.++||||||+++|||++|+.||........  ... .....       ...+.+
T Consensus       178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~-~~~~~-------~~~~~~  247 (295)
T 2clq_A          178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA--AMF-KVGMF-------KVHPEI  247 (295)
T ss_dssp             ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH--HHH-HHHHH-------CCCCCC
T ss_pred             CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH--HHH-hhccc-------cccccc
Confidence            2233457899999999987654  88999999999999999999999964322111  010 00000       111222


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ....    ...+.+++.+||+.||++||+++|++++.++..
T Consensus       248 ~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~  284 (295)
T 2clq_A          248 PESM----SAEAKAFILKCFEPDPDKRACANDLLVDEFLKV  284 (295)
T ss_dssp             CTTS----CHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC
T ss_pred             cccC----CHHHHHHHHHHccCChhhCCCHHHHhcChhhhh
Confidence            2222    245677889999999999999999999998864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=1.4e-40  Score=350.10  Aligned_cols=258  Identities=26%  Similarity=0.425  Sum_probs=208.9

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEc-------CCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeeee
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFR-------ETNSYIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCH  419 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~-------~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~  419 (645)
                      ...++|...+.||+|+||.||+|.+.       .++..||+|++... .....+.+.+|++++.++ +||||++++++|.
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  111 (334)
T 2pvf_A           32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT  111 (334)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence            34578888999999999999999975       35678999999765 345567899999999999 8999999999999


Q ss_pred             eCCeEEEEEEecCCCChhhhhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCe
Q 042831          420 EKKELLLVYEFMPNGSLDSHLFKEN---------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNI  484 (645)
Q Consensus       420 ~~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NI  484 (645)
                      ..+..++||||+++|+|.+++....               ..+++..++.++.||+.||.|||+   .+|+||||||+||
T Consensus       112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NI  188 (334)
T 2pvf_A          112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNV  188 (334)
T ss_dssp             SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGE
T ss_pred             cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceE
Confidence            9999999999999999999997543               248999999999999999999999   8999999999999


Q ss_pred             EECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCc
Q 042831          485 MLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQ  562 (645)
Q Consensus       485 Lld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~  562 (645)
                      |++.++.+||+|||+++........ ......+++.|+|||++.+..++.++||||||+++|||++ |+.||......  
T Consensus       189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--  266 (334)
T 2pvf_A          189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--  266 (334)
T ss_dssp             EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred             EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--
Confidence            9999999999999999866543221 2233456788999999988889999999999999999999 99999754321  


Q ss_pred             hhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          563 VSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       563 ~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                       .+..    ....+..     +.....+    ...+.+++.+||+.||++|||++|+++.|+.
T Consensus       267 -~~~~----~~~~~~~-----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  315 (334)
T 2pvf_A          267 -ELFK----LLKEGHR-----MDKPANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  315 (334)
T ss_dssp             -HHHH----HHHHTCC-----CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -HHHH----HHhcCCC-----CCCCccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence             1121    1112211     1111122    2457788899999999999999999999985

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1.6e-39  Score=354.65  Aligned_cols=272  Identities=22%  Similarity=0.281  Sum_probs=204.0

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC-----Ce
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK-----KE  423 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~-----~~  423 (645)
                      .++|...+.||+|+||.||+|++..+++.||||++...  .....+.+.+|++++++++||||+++++++...     +.
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            46788999999999999999999999999999999753  344567899999999999999999999999766     57


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      .++||||++ ++|.+++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus       105 ~~lv~e~~~-~~L~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~~  179 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKT-PIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTI  179 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEecCC-cCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence            999999985 699988854 4569999999999999999999999   89999999999999999999999999999876


Q ss_pred             cccCC---------------------cceeecccCccccCcccc-ccCCCCcchhHHHHHHHHHHHHcCCCCCCCC----
Q 042831          504 EHAKG---------------------SQTTVLAGTMGYMAPECA-TTGKASKESDVYSFGIVALEIACGRKPINPK----  557 (645)
Q Consensus       504 ~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~t~~sDV~SfGvll~elltG~~pf~~~----  557 (645)
                      .....                     .......||+.|+|||++ ....++.++|||||||++|||++|..||...    
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~  259 (432)
T 3n9x_A          180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNR  259 (432)
T ss_dssp             -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGC
T ss_pred             cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccc
Confidence            43321                     123556899999999986 5567999999999999999999865554321    


Q ss_pred             -------CCC--------------CchhHHHHHHHHhcCCccc-----------cccCc-cccCCCCH-----HHHHHHH
Q 042831          558 -------APQ--------------GQVSLLQWVWDLYGNGKLL-----------EAVDP-RLCRDFDG-----QQIERLM  599 (645)
Q Consensus       558 -------~~~--------------~~~~l~~~~~~~~~~~~l~-----------~~~d~-~l~~~~~~-----~~~~~l~  599 (645)
                             ..-              .....+..+.+..+.....           ..+.. ......+.     .....+.
T Consensus       260 ~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  339 (432)
T 3n9x_A          260 FPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGI  339 (432)
T ss_dssp             CCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHH
T ss_pred             cccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHH
Confidence                   100              0011112222222211100           00000 00000000     1124567


Q ss_pred             HHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          600 IVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       600 ~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      +|+.+||+.||++|||++|+++|.++..
T Consensus       340 dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  367 (432)
T 3n9x_A          340 NLLESMLKFNPNKRITIDQALDHPYLKD  367 (432)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHTCGGGTT
T ss_pred             HHHHHHhcCCcccCCCHHHHhcChhhhh
Confidence            8889999999999999999999999763

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=2.9e-40  Score=342.59  Aligned_cols=254  Identities=24%  Similarity=0.417  Sum_probs=211.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .+.|...+.||+|+||.||+|++..+++.||+|.+.... ....+.+.+|+.++.+++||||+++++++...+..++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            356888999999999999999999899999999987543 3456789999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+++++|.+++..  ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++....... .
T Consensus       101 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~  174 (303)
T 3a7i_A          101 YLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-I  174 (303)
T ss_dssp             CCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-C
T ss_pred             eCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCccc-c
Confidence            9999999998853  568999999999999999999999   899999999999999999999999999997654322 2


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      ......|++.|+|||.+.+..++.++||||||+++|||++|+.||......   .....    ...+.     .+.+...
T Consensus       175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~----~~~~~-----~~~~~~~  242 (303)
T 3a7i_A          175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM---KVLFL----IPKNN-----PPTLEGN  242 (303)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHH----HHHSC-----CCCCCSS
T ss_pred             ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH---HHHHH----hhcCC-----CCCCccc
Confidence            233457899999999999999999999999999999999999999753321   11111    11111     1222222


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ++    ..+..++..||+.||++|||++|++++.++.
T Consensus       243 ~~----~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~  275 (303)
T 3a7i_A          243 YS----KPLKEFVEACLNKEPSFRPTAKELLKHKFIL  275 (303)
T ss_dssp             CC----HHHHHHHHHHCCSSGGGSCCHHHHTTCHHHH
T ss_pred             cC----HHHHHHHHHHcCCChhhCcCHHHHhhChhhh
Confidence            33    3577888999999999999999999998763

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=4.5e-40  Score=345.89  Aligned_cols=271  Identities=25%  Similarity=0.348  Sum_probs=206.9

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      .++|...+.||+|+||.||+|++..+|+.||+|++....  ....+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            357888999999999999999999999999999986543  334567889999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+++++|..++. ....+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... 
T Consensus       104 e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-  178 (331)
T 4aaa_A          104 EFVDHTILDDLEL-FPNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-  178 (331)
T ss_dssp             ECCSEEHHHHHHH-STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred             ecCCcchHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-
Confidence            9999998887764 34569999999999999999999999   899999999999999999999999999997654322 


Q ss_pred             cceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHH--------HHHHHhcC-Ccc
Q 042831          509 SQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQ--------WVWDLYGN-GKL  578 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~--------~~~~~~~~-~~l  578 (645)
                      .......|+..|+|||++.+. .++.++|||||||++|||++|+.||......+......        .....+.. ...
T Consensus       179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (331)
T 4aaa_A          179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF  258 (331)
T ss_dssp             -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred             cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence            223345689999999998775 68999999999999999999999997644321111000        00111111 111


Q ss_pred             ccccCccccCCCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          579 LEAVDPRLCRDFDG-----QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       579 ~~~~d~~l~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .....+.+......     ...+.+.+++.+||+.||++|||++|++++.++.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~  311 (331)
T 4aaa_A          259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ  311 (331)
T ss_dssp             TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhc
Confidence            11111111111111     1235678899999999999999999999998874

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.6e-39  Score=340.01  Aligned_cols=274  Identities=24%  Similarity=0.321  Sum_probs=206.8

Q ss_pred             CccChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc--CCCCccEEEee
Q 042831          340 KRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL--RHRNLVQLLGW  417 (645)
Q Consensus       340 ~~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l--~H~nlv~l~~~  417 (645)
                      ...+........++|...++||+|+||.||+|++.  ++.||||++....   ...+..|.+++..+  +||||++++++
T Consensus        25 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~   99 (337)
T 3mdy_A           25 SGLPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAA   99 (337)
T ss_dssp             SSSCHHHHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEE
T ss_pred             CCCCcccccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEE
Confidence            34455555566789999999999999999999886  7899999985432   23445566666554  89999999999


Q ss_pred             eeeC----CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhc-----CCCeeeccCCCCCeEECC
Q 042831          418 CHEK----KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW-----EQCVVHRDIKSSNIMLDS  488 (645)
Q Consensus       418 ~~~~----~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~Dlkp~NILld~  488 (645)
                      +...    ...++||||+++|+|.+++...  .+++..++.++.|++.||.|||+.+     ..+|+||||||+|||++.
T Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~  177 (337)
T 3mdy_A          100 DIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK  177 (337)
T ss_dssp             EEESCGGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECT
T ss_pred             EccCCCCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECC
Confidence            9877    7899999999999999999543  6899999999999999999999821     129999999999999999


Q ss_pred             CCcEEEeeccCcccccccCCcc---eeecccCccccCccccccCCCCcc------hhHHHHHHHHHHHHcC---------
Q 042831          489 NFNAKIGDFGLARLVEHAKGSQ---TTVLAGTMGYMAPECATTGKASKE------SDVYSFGIVALEIACG---------  550 (645)
Q Consensus       489 ~~~~kl~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~t~~------sDV~SfGvll~elltG---------  550 (645)
                      ++.+||+|||+++.........   .....||+.|+|||++.+...+.+      +|||||||++|||++|         
T Consensus       178 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~  257 (337)
T 3mdy_A          178 NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE  257 (337)
T ss_dssp             TSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred             CCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccc
Confidence            9999999999997654332221   224579999999999987766655      9999999999999999         


Q ss_pred             -CCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          551 -RKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       551 -~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                       +.||.........  ......................   ..+....+.+++.+||+.||++|||+.|++++|+.
T Consensus       258 ~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  328 (337)
T 3mdy_A          258 YQLPYHDLVPSDPS--YEDMREIVCIKKLRPSFPNRWS---SDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK  328 (337)
T ss_dssp             CCCTTTTTSCSSCC--HHHHHHHHTTSCCCCCCCGGGG---GSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             ccccHhhhcCCCCc--hhhhHHHHhhhccCccccccch---hhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence             6666544332211  1111122211221111111111   12566778899999999999999999999999975

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=1.4e-39  Score=338.49  Aligned_cols=260  Identities=24%  Similarity=0.367  Sum_probs=200.6

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ..++|...+.||+|+||.||+|....+|+.||+|++...   .....+.+.+|+.++.+++||||+++++++...+..++
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l  109 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI  109 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence            345788999999999999999999888999999998753   34456788999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          427 VYEFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      ||||+++++|.+++..   ....+++..++.++.||+.||.|||+   .+++||||||+||+++.++.+||+|||+++..
T Consensus       110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~  186 (310)
T 2wqm_A          110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFF  186 (310)
T ss_dssp             EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred             EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence            9999999999998864   35678999999999999999999999   89999999999999999999999999999765


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      .... .......|+..|+|||.+.+..++.++||||||+++|||++|+.||......    ..... .....+...... 
T Consensus       187 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~-~~~~~~~~~~~~-  259 (310)
T 2wqm_A          187 SSKT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLC-KKIEQCDYPPLP-  259 (310)
T ss_dssp             -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC----HHHHH-HHHHTTCSCCCC-
T ss_pred             cCCC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh----HHHHH-HHhhcccCCCCc-
Confidence            4322 2223456899999999999999999999999999999999999999754322    11111 112222211111 


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                         ...+    ...+.+++.+||+.||++|||++++++.|+.-
T Consensus       260 ---~~~~----~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l  295 (310)
T 2wqm_A          260 ---SDHY----SEELRQLVNMCINPDPEKRPDVTYVYDVAKRM  295 (310)
T ss_dssp             ---TTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---cccc----CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence               1112    24577888999999999999999999999753

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=3.6e-40  Score=355.96  Aligned_cols=255  Identities=23%  Similarity=0.309  Sum_probs=197.0

Q ss_pred             cCCCCC-CccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHh-cCCCCccEEEeeeee----CCeEE
Q 042831          352 NDFNDD-QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISR-LRHRNLVQLLGWCHE----KKELL  425 (645)
Q Consensus       352 ~~f~~~-~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~-l~H~nlv~l~~~~~~----~~~~~  425 (645)
                      ++|... +.||+|+||.||++.+..+++.||||++...     ..+.+|++++.+ .+||||+++++++..    .+.++
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            345554 6899999999999999999999999998633     356788888754 589999999999875    56789


Q ss_pred             EEEEecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC---CCcEEEeeccCcc
Q 042831          426 LVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLAR  501 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~---~~~~kl~DfGla~  501 (645)
                      +|||||++|+|.+++.... ..+++..+..|+.||+.||.|||+   .+|+||||||+|||++.   ++.+||+|||+++
T Consensus       136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~  212 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK  212 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence            9999999999999997643 469999999999999999999998   89999999999999997   7899999999998


Q ss_pred             cccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCch-hHHHHHHHHhcCCcccc
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQV-SLLQWVWDLYGNGKLLE  580 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~-~l~~~~~~~~~~~~l~~  580 (645)
                      .....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....    ...+... 
T Consensus       213 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~----i~~~~~~-  285 (400)
T 1nxk_A          213 ETTSH--NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR----IRMGQYE-  285 (400)
T ss_dssp             ECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHH----HHHTCCC-
T ss_pred             ccCCC--CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHH----HHcCccc-
Confidence            65422  2234467899999999999999999999999999999999999999765433211 11111    1111111 


Q ss_pred             ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       581 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ...+. ...+    ...+.+++..||+.||++|||++|+++|.|+.
T Consensus       286 ~~~~~-~~~~----s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~  326 (400)
T 1nxk_A          286 FPNPE-WSEV----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  326 (400)
T ss_dssp             CCTTT-TTTS----CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             CCCcc-cccC----CHHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence            00010 0112    24577888999999999999999999999874

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=2e-40  Score=352.62  Aligned_cols=269  Identities=24%  Similarity=0.310  Sum_probs=209.4

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .++|...++||+|+||.||++.+..+++.||+|++... .....+.+.+|+.++.+++||||+++++++..++..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            45788899999999999999999999999999999765 34456789999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCC-CeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ-CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |+++++|.+++... ..+++..+..++.|++.||.|||+   . +|+||||||+|||++.++.+||+|||+++.....  
T Consensus       112 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--  185 (360)
T 3eqc_A          112 HMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--  185 (360)
T ss_dssp             CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred             CCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence            99999999999654 468999999999999999999998   5 8999999999999999999999999999755322  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHH---------HHHHhc-----
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQW---------VWDLYG-----  574 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~---------~~~~~~-----  574 (645)
                       ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.......         .+....     
T Consensus       186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (360)
T 3eqc_A          186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL  264 (360)
T ss_dssp             -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred             -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence             22345789999999999999999999999999999999999999975432111000000         000000     


Q ss_pred             ---------CCccccccC----ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          575 ---------NGKLLEAVD----PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       575 ---------~~~l~~~~d----~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                               .....+.++    ..............+.+++.+||+.||++|||++|+++|.++.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  329 (360)
T 3eqc_A          265 NKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK  329 (360)
T ss_dssp             ---------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHH
T ss_pred             cccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence                     000000000    0000000011224577888999999999999999999999864

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.1e-40  Score=376.49  Aligned_cols=254  Identities=26%  Similarity=0.429  Sum_probs=202.9

Q ss_pred             cCCCCCC-ccCcCCcEEEEEEEEc--CCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          352 NDFNDDQ-KLGQGGFGGVYKGFFR--ETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       352 ~~f~~~~-~LG~G~fG~Vy~g~~~--~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      +++...+ +||+|+||.||+|.+.  .++..||||+++... ....+++.+|++++.+++||||++++++|.. +..++|
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv  413 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV  413 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence            3344344 7999999999999876  346789999997653 3467889999999999999999999999976 568999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      ||||++|+|.+++......+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus       414 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~  490 (613)
T 2ozo_A          414 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD  490 (613)
T ss_dssp             EECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---
T ss_pred             EEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCC
Confidence            99999999999998777789999999999999999999999   899999999999999999999999999998764332


Q ss_pred             Ccc--eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          508 GSQ--TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       508 ~~~--~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      ...  .....+++.|+|||++.++.++.++|||||||+||||++ |+.||......   .+.    ..+.++....    
T Consensus       491 ~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---~~~----~~i~~~~~~~----  559 (613)
T 2ozo_A          491 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVM----AFIEQGKRME----  559 (613)
T ss_dssp             -----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH---HHH----HHHHTTCCCC----
T ss_pred             ceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH---HHH----HHHHcCCCCC----
Confidence            211  122345689999999999999999999999999999998 99999865432   122    2222332111    


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                           .+......+.+++..||+.||++||+++++++.|+.
T Consensus       560 -----~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  595 (613)
T 2ozo_A          560 -----CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  595 (613)
T ss_dssp             -----CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred             -----CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence                 111223467788899999999999999999998874

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=2.7e-40  Score=343.09  Aligned_cols=258  Identities=23%  Similarity=0.354  Sum_probs=209.4

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|...+.||+|+||.||++++..+|+.||+|.+........+.+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            45788899999999999999999989999999999866555556788999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE---CCCCcEEEeeccCcccccccC
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML---DSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl---d~~~~~kl~DfGla~~~~~~~  507 (645)
                      +++++|.+++... ..+++..+..++.|++.||.|||+   .+++||||||+||++   +.++.+||+|||+++..... 
T Consensus        88 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-  162 (304)
T 2jam_A           88 VSGGELFDRILER-GVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-  162 (304)
T ss_dssp             CCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred             CCCccHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence            9999999988654 468999999999999999999999   899999999999999   78899999999999754322 


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                        ......|++.|+|||++.+..++.++||||||+++|||++|+.||.....   ..+..    ...++...  .+....
T Consensus       163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~----~i~~~~~~--~~~~~~  231 (304)
T 2jam_A          163 --IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE---SKLFE----KIKEGYYE--FESPFW  231 (304)
T ss_dssp             --TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHHH----HHHHCCCC--CCTTTT
T ss_pred             --ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHH----HHHcCCCC--CCcccc
Confidence              22335689999999999999999999999999999999999999975432   11111    12222111  111111


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      ...    ...+.+++.+||+.||++|||++|++++.++...
T Consensus       232 ~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          232 DDI----SESAKDFICHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             TTS----CHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             ccC----CHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence            122    2467788899999999999999999999987643

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=5.4e-40  Score=336.74  Aligned_cols=256  Identities=23%  Similarity=0.307  Sum_probs=206.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh------hhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK------QGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~------~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      ++|...+.||+|+||.||++++..+++.||+|.+.....      ...+.+.+|+.++.+++||||+++++++.+.+..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            568889999999999999999998999999999865421      13678999999999999999999999999999999


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC----cEEEeeccCcc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF----NAKIGDFGLAR  501 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~----~~kl~DfGla~  501 (645)
                      +||||+++++|.+++... ..+++..++.++.||+.||.|||+   .+++||||||+||+++.++    .+||+|||++.
T Consensus        85 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~  160 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH  160 (283)
T ss_dssp             EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence            999999999999998643 468999999999999999999998   8999999999999998877    89999999998


Q ss_pred             cccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA  581 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~  581 (645)
                      ......  ......|++.|+|||++....++.++||||||+++|||++|+.||......   ....    .......  .
T Consensus       161 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~----~~~~~~~--~  229 (283)
T 3bhy_A          161 KIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ---ETLT----NISAVNY--D  229 (283)
T ss_dssp             ECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHH----HHHTTCC--C
T ss_pred             eccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH---HHHH----HhHhccc--C
Confidence            654322  233456899999999999999999999999999999999999999754321   1111    1111110  0


Q ss_pred             cCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       582 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .++......    ...+.+++.+||+.||++|||+.|++++.++.
T Consensus       230 ~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~  270 (283)
T 3bhy_A          230 FDEEYFSNT----SELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK  270 (283)
T ss_dssp             CCHHHHTTC----CHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHH
T ss_pred             CcchhcccC----CHHHHHHHHHHccCCHhHCcCHHHHHhCHHHH
Confidence            111111112    24577888999999999999999999998764

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=6.4e-41  Score=346.74  Aligned_cols=266  Identities=24%  Similarity=0.401  Sum_probs=191.2

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ...++|...+.||+|+||.||+|.+..+++.||||++.... ....+++.+|+.++.+++||||+++++++...+..++|
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence            34578999999999999999999998889999999886543 34456788999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhh-------cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCc
Q 042831          428 YEFMPNGSLDSHLFK-------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA  500 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla  500 (645)
                      |||+++++|.+++..       ....+++..++.++.||+.||.|||+   .+++||||||+||+++.++.+||+|||++
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~  168 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVS  168 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence            999999999999864       24569999999999999999999999   89999999999999999999999999998


Q ss_pred             ccccccCC----cceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC
Q 042831          501 RLVEHAKG----SQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN  575 (645)
Q Consensus       501 ~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~  575 (645)
                      ........    .......||+.|+|||++.. ..++.++||||||+++|||++|+.||........   .   ......
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~---~~~~~~  242 (303)
T 2vwi_A          169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV---L---MLTLQN  242 (303)
T ss_dssp             HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH---H---HHHHTS
T ss_pred             heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH---H---HHHhcc
Confidence            76543211    12234578999999999876 5689999999999999999999999976443211   1   111111


Q ss_pred             C--ccc-cccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          576 G--KLL-EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       576 ~--~l~-~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      .  ... ...++.+...++    ..+.+++.+||+.||++|||++|++++.++..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  293 (303)
T 2vwi_A          243 DPPSLETGVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAELLRHKFFQK  293 (303)
T ss_dssp             SCCCTTC-----CCCCCCC----HHHHHHHHHHCCSSGGGSCCHHHHHTSTTC--
T ss_pred             CCCccccccccchhhhhhh----HHHHHHHHHHccCChhhCcCHHHHhhChhhhc
Confidence            1  010 111122222232    45677889999999999999999999998763

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.7e-40  Score=338.96  Aligned_cols=255  Identities=26%  Similarity=0.366  Sum_probs=204.2

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCe---EEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE-EEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNS---YIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL-LLV  427 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~---~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~-~lV  427 (645)
                      .|...++||+|+||.||+|.+..++.   .||+|.+... .....+.+.+|+.++++++||||+++++++...+.. ++|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            35556899999999999999765443   7999998754 345567899999999999999999999999876655 999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+.+|+|.+++......+++..++.++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++......
T Consensus       102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  178 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE  178 (298)
T ss_dssp             ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred             EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence            99999999999998777789999999999999999999999   899999999999999999999999999997654322


Q ss_pred             ---CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          508 ---GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       508 ---~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                         ........++..|+|||.+.+..++.++||||||+++|||++|+.|+......  ..+...+    ..+..     .
T Consensus       179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~--~~~~~~~----~~~~~-----~  247 (298)
T 3pls_A          179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP--FDLTHFL----AQGRR-----L  247 (298)
T ss_dssp             GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG--GGHHHHH----HTTCC-----C
T ss_pred             ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH--HHHHHHh----hcCCC-----C
Confidence               12233456788999999999999999999999999999999966554432221  1122211    11111     1


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ......    ...+.+++.+||+.||++|||++++++.|+.
T Consensus       248 ~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~  284 (298)
T 3pls_A          248 PQPEYC----PDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ  284 (298)
T ss_dssp             CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCccc----hHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            111112    2467788899999999999999999999975

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=3.1e-40  Score=346.64  Aligned_cols=267  Identities=19%  Similarity=0.270  Sum_probs=211.3

Q ss_pred             cChHHHHHhhcCCCCC-CccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcC-CCCccEEEee
Q 042831          342 FPYKELALATNDFNDD-QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLR-HRNLVQLLGW  417 (645)
Q Consensus       342 ~~~~el~~~~~~f~~~-~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~  417 (645)
                      ..++......+.|... ++||+|+||.||+|++..+++.||+|++....  ......+.+|+.++.+++ ||||++++++
T Consensus        18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~   97 (327)
T 3lm5_A           18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV   97 (327)
T ss_dssp             CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence            3344445556667766 88999999999999999999999999987542  334678899999999995 6999999999


Q ss_pred             eeeCCeEEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC---CCcEE
Q 042831          418 CHEKKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAK  493 (645)
Q Consensus       418 ~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~---~~~~k  493 (645)
                      +.+.+..++||||+++|+|.+++... ...+++..++.++.||+.||.|||+   .+|+||||||+|||++.   ++.+|
T Consensus        98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~k  174 (327)
T 3lm5_A           98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIK  174 (327)
T ss_dssp             EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEE
T ss_pred             EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEE
Confidence            99999999999999999999998643 4679999999999999999999999   89999999999999987   78999


Q ss_pred             EeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHh
Q 042831          494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY  573 (645)
Q Consensus       494 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~  573 (645)
                      |+|||+++......  ......||+.|+|||++.+..++.++||||||+++|||++|+.||......   .....+..  
T Consensus       175 L~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~i~~--  247 (327)
T 3lm5_A          175 IVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ---ETYLNISQ--  247 (327)
T ss_dssp             ECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHH--
T ss_pred             EeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch---HHHHHHHh--
Confidence            99999998664322  233457999999999999999999999999999999999999999754321   11111110  


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .....    .......    ....+.+++.+||+.||++|||++|++++.++.
T Consensus       248 ~~~~~----~~~~~~~----~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~  292 (327)
T 3lm5_A          248 VNVDY----SEETFSS----VSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQ  292 (327)
T ss_dssp             TCCCC----CTTTTTT----SCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGC
T ss_pred             ccccc----Cchhhcc----cCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhc
Confidence            01100    1111111    234577888999999999999999999999975

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.5e-39  Score=338.67  Aligned_cols=257  Identities=19%  Similarity=0.205  Sum_probs=200.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      .++|...+.||+|+||.||+|.+..+++.||+|++....   ....+.+.+|+.++.+++||||+++++++..++..++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            467889999999999999999999899999999987542   33457889999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+++++|.+++... ..+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++.......
T Consensus       113 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  188 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDEK  188 (309)
T ss_dssp             EECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred             EEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence            9999999999998654 468999999999999999999999   899999999999999999999999999998665443


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCc-cccccCccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK-LLEAVDPRL  586 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~-l~~~~d~~l  586 (645)
                      ........|++.|+|||.+.+..++.++||||||+++|||++|+.||.....    .   .......... ....    .
T Consensus       189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~---~~~~~~~~~~~~~~~----~  257 (309)
T 2h34_A          189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL----S---VMGAHINQAIPRPST----V  257 (309)
T ss_dssp             --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH----H---HHHHHHHSCCCCGGG----T
T ss_pred             cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH----H---HHHHHhccCCCCccc----c
Confidence            3334456789999999999998999999999999999999999999974321    1   1111111111 1111    1


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHhccC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRP-SIRQVIHVLNFE  626 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~~  626 (645)
                      ...++    ..+.+++.+||+.||++|| +++++++.|+..
T Consensus       258 ~~~~~----~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~  294 (309)
T 2h34_A          258 RPGIP----VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAA  294 (309)
T ss_dssp             STTCC----THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred             CCCCC----HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence            11222    3567788999999999999 999999999854

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=9.1e-40  Score=355.01  Aligned_cols=259  Identities=22%  Similarity=0.336  Sum_probs=199.2

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--------hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--------KQGIKEYASEVKIISRLRHRNLVQLLGWCHEK  421 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--------~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~  421 (645)
                      ..++|...++||+|+||.||+|.+..+++.||||++....        ......+.+|++++.+++||||+++++++. .
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~  211 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A  211 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence            4568999999999999999999999999999999986431        122335789999999999999999999975 4


Q ss_pred             CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC---CcEEEeecc
Q 042831          422 KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN---FNAKIGDFG  498 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~---~~~kl~DfG  498 (645)
                      +..++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.+   +.+||+|||
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~DFG  287 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFG  287 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSS-SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred             CceEEEEEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEeecc
Confidence            568999999999999998854 4568999999999999999999998   899999999999999754   459999999


Q ss_pred             CcccccccCCcceeecccCccccCcccccc---CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC
Q 042831          499 LARLVEHAKGSQTTVLAGTMGYMAPECATT---GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN  575 (645)
Q Consensus       499 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~  575 (645)
                      +++.....  .......||+.|+|||++..   ..++.++|||||||++|||++|+.||........  +.+.    ...
T Consensus       288 ~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~~~----i~~  359 (419)
T 3i6u_A          288 HSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQ----ITS  359 (419)
T ss_dssp             TTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--HHHH----HHT
T ss_pred             cceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--HHHH----Hhc
Confidence            99876432  23344679999999999853   5688999999999999999999999975443221  1111    112


Q ss_pred             CccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          576 GKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       576 ~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      +....  .+.....    ....+.+++.+||+.||++|||++|+++|.|+..
T Consensus       360 ~~~~~--~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          360 GKYNF--IPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             TCCCC--CHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             CCCCC--Cchhhcc----cCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence            21110  0111111    1246778899999999999999999999999753

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.7e-40  Score=348.45  Aligned_cols=253  Identities=29%  Similarity=0.443  Sum_probs=204.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEE--EEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYI--AVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~v--avK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ++|...+.||+|+||.||+|++..++..+  |+|.+... .....+.+.+|++++.++ +||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            67888999999999999999998888755  99988753 344556789999999999 899999999999999999999


Q ss_pred             EEecCCCChhhhhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcE
Q 042831          428 YEFMPNGSLDSHLFKEN---------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA  492 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~  492 (645)
                      |||+++++|.+++....               ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCeE
Confidence            99999999999996543               479999999999999999999999   899999999999999999999


Q ss_pred             EEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHH
Q 042831          493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWD  571 (645)
Q Consensus       493 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~  571 (645)
                      ||+|||+++......  ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||......       ....
T Consensus       182 kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-------~~~~  252 (327)
T 1fvr_A          182 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-------ELYE  252 (327)
T ss_dssp             EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHH
T ss_pred             EEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-------HHHH
Confidence            999999987433211  2233456889999999988889999999999999999998 99999754321       1112


Q ss_pred             HhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          572 LYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       572 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....+.     .......    ....+.+++.+||+.||++|||++|++++|+.
T Consensus       253 ~~~~~~-----~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  297 (327)
T 1fvr_A          253 KLPQGY-----RLEKPLN----CDDEVYDLMRQCWREKPYERPSFAQILVSLNR  297 (327)
T ss_dssp             HGGGTC-----CCCCCTT----BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HhhcCC-----CCCCCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            222221     1111111    22467788899999999999999999999874

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=7.2e-41  Score=357.75  Aligned_cols=260  Identities=13%  Similarity=0.061  Sum_probs=190.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhc--CCCCccEEE-------eee
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRL--RHRNLVQLL-------GWC  418 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l--~H~nlv~l~-------~~~  418 (645)
                      ..+|...+.||+|+||.||+|.+..+++.||||++....   ....+.+.+|+.++..+  +|||+++++       +++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            445888999999999999999999999999999998653   23456677886555555  699988865       344


Q ss_pred             eeC-----------------CeEEEEEEecCCCChhhhhhhcCCCCCHHHH------HHHHHHHHHHHHHHHhhcCCCee
Q 042831          419 HEK-----------------KELLLVYEFMPNGSLDSHLFKENSLLTWEFR------YKIAQDLASGLLYLQEEWEQCVV  475 (645)
Q Consensus       419 ~~~-----------------~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~iv  475 (645)
                      ...                 ...++||||++ |+|.+++...+..+++..+      ..++.||+.||.|||+   ++|+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~iv  216 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQS---KGLV  216 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCCc
Confidence            332                 34899999998 8999999865555666777      8888999999999998   8999


Q ss_pred             eccCCCCCeEECCCCcEEEeeccCcccccccCCcceeecccCccccCcccccc--CCCCcchhHHHHHHHHHHHHcCCCC
Q 042831          476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT--GKASKESDVYSFGIVALEIACGRKP  553 (645)
Q Consensus       476 H~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~t~~sDV~SfGvll~elltG~~p  553 (645)
                      ||||||+|||++.++.+||+|||+++....    ......+|+.|+|||++.+  ..++.++|||||||++|||++|+.|
T Consensus       217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P  292 (371)
T 3q60_A          217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP  292 (371)
T ss_dssp             ETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999986532    2224557799999999987  6799999999999999999999999


Q ss_pred             CCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       554 f~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      |..........        +............+...........+.+++.+||+.||++|||+.|+++|.++.
T Consensus       293 f~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~  357 (371)
T 3q60_A          293 FGLVTPGIKGS--------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFL  357 (371)
T ss_dssp             TTBCCTTCTTC--------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHH
T ss_pred             CCCcCcccccc--------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHH
Confidence            98654321110        000000000011110000012234677888999999999999999999998864

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=3.5e-40  Score=343.51  Aligned_cols=263  Identities=25%  Similarity=0.411  Sum_probs=202.3

Q ss_pred             hHHHHHhhcCCCCCCccCcCCcEEEEEEEEcC---CCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeee
Q 042831          344 YKELALATNDFNDDQKLGQGGFGGVYKGFFRE---TNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWC  418 (645)
Q Consensus       344 ~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~---~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~  418 (645)
                      ++++....++|...+.||+|+||.||+|.+..   ++..||+|.+...  .....+.+.+|+.++.+++||||+++++++
T Consensus        26 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~  105 (313)
T 3brb_A           26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVC  105 (313)
T ss_dssp             TTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             HHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence            44555667889999999999999999998764   4568999998754  345567899999999999999999999999


Q ss_pred             eeCC-----eEEEEEEecCCCChhhhhhh-----cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC
Q 042831          419 HEKK-----ELLLVYEFMPNGSLDSHLFK-----ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS  488 (645)
Q Consensus       419 ~~~~-----~~~lV~Ey~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~  488 (645)
                      ...+     ..++||||+++|+|.+++..     ....+++..++.++.||++||.|||+   .+|+||||||+||+++.
T Consensus       106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~  182 (313)
T 3brb_A          106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRD  182 (313)
T ss_dssp             EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECT
T ss_pred             eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcC
Confidence            8654     35999999999999999853     34579999999999999999999998   89999999999999999


Q ss_pred             CCcEEEeeccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHH
Q 042831          489 NFNAKIGDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLL  566 (645)
Q Consensus       489 ~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~  566 (645)
                      ++.+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......   .+.
T Consensus       183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~  259 (313)
T 3brb_A          183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH---EMY  259 (313)
T ss_dssp             TSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHH
T ss_pred             CCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH---HHH
Confidence            99999999999986543322 22233557889999999999999999999999999999999 88999754432   112


Q ss_pred             HHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          567 QWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       567 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..    ...+..     +.....+    ...+.+++..||+.||++|||+++++++|+.
T Consensus       260 ~~----~~~~~~-----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  305 (313)
T 3brb_A          260 DY----LLHGHR-----LKQPEDC----LDELYEIMYSCWRTDPLDRPTFSVLRLQLEK  305 (313)
T ss_dssp             HH----HHTTCC-----CCCBTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HH----HHcCCC-----CCCCccc----cHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            11    112211     1111222    2467788899999999999999999999974

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=5.6e-40  Score=357.70  Aligned_cols=272  Identities=20%  Similarity=0.264  Sum_probs=209.0

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc------CCCCccEEEeeeeeCCe
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL------RHRNLVQLLGWCHEKKE  423 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l------~H~nlv~l~~~~~~~~~  423 (645)
                      ...+|...++||+|+||.||+|.+..+++.||||++... ....+++.+|+.++..+      +|+||+++++++...+.
T Consensus        95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  173 (429)
T 3kvw_A           95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH  173 (429)
T ss_dssp             ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred             ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence            346799999999999999999999999999999999654 34456778899888887      56799999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc--EEEeeccCc
Q 042831          424 LLLVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN--AKIGDFGLA  500 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~--~kl~DfGla  500 (645)
                      .++||||+. ++|.+++.... ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.  +||+|||++
T Consensus       174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a  249 (429)
T 3kvw_A          174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSS  249 (429)
T ss_dssp             EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeecccc
Confidence            999999995 68998887643 459999999999999999999999   89999999999999999887  999999999


Q ss_pred             ccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC----
Q 042831          501 RLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG----  576 (645)
Q Consensus       501 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~----  576 (645)
                      +....    ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+   .+..+.+..+..    
T Consensus       250 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~---~l~~i~~~~~~p~~~~  322 (429)
T 3kvw_A          250 CYEHQ----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD---QLACMIELLGMPSQKL  322 (429)
T ss_dssp             EETTC----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCCCCHHH
T ss_pred             eecCC----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCCHHH
Confidence            75432    2234578999999999999999999999999999999999999997654322   111111111100    


Q ss_pred             -----ccccccCcc---------------------------cc---CCCCH------HHHHHHHHHHHHcCCCCCCCCCC
Q 042831          577 -----KLLEAVDPR---------------------------LC---RDFDG------QQIERLMIVGLWCAHPDENLRPS  615 (645)
Q Consensus       577 -----~l~~~~d~~---------------------------l~---~~~~~------~~~~~l~~l~~~Cl~~dP~~RPs  615 (645)
                           .....++..                           +.   .....      .....+.+++.+||+.||++|||
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpt  402 (429)
T 3kvw_A          323 LDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT  402 (429)
T ss_dssp             HHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCC
Confidence                 000000000                           00   00000      01245778999999999999999


Q ss_pred             HHHHHHHhccCCCCCCCC
Q 042831          616 IRQVIHVLNFEAPLPALP  633 (645)
Q Consensus       616 ~~evl~~L~~~~~~p~~p  633 (645)
                      ++|+++|.|+....|..|
T Consensus       403 a~e~L~Hpw~~~~~~~~~  420 (429)
T 3kvw_A          403 PGQALRHPWLRRRLPKPP  420 (429)
T ss_dssp             HHHHHTSTTTC-------
T ss_pred             HHHHhCChhhccCCCCCC
Confidence            999999999987666544

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1.7e-40  Score=337.62  Aligned_cols=249  Identities=20%  Similarity=0.319  Sum_probs=202.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC--CeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK--KELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~--~~~~l  426 (645)
                      .++|...+.||+|+||.||+|++.  ++.||||++...  .....+.+.+|+.++.+++||||+++++++...  +..++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   86 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL   86 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence            357888999999999999999985  788999998754  345567899999999999999999999999877  78899


Q ss_pred             EEEecCCCChhhhhhhcCC-CCCHHHHHHHHHHHHHHHHHHHhhcCCC--eeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          427 VYEFMPNGSLDSHLFKENS-LLTWEFRYKIAQDLASGLLYLQEEWEQC--VVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      ||||+++|+|.+++..... .+++..++.++.||+.||.|||+   .+  ++||||||+||+++.++.++|+|||++...
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~  163 (271)
T 3kmu_A           87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSF  163 (271)
T ss_dssp             EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred             eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence            9999999999999976543 68999999999999999999998   77  999999999999999999999999987543


Q ss_pred             cccCCcceeecccCccccCccccccCCCC---cchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKAS---KESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE  580 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t---~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~  580 (645)
                      ..      ....||+.|+|||.+.+...+   .++||||||+++|||++|+.||......      +........+.   
T Consensus       164 ~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~---  228 (271)
T 3kmu_A          164 QS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM------EIGMKVALEGL---  228 (271)
T ss_dssp             SC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH------HHHHHHHHSCC---
T ss_pred             cc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH------HHHHHHHhcCC---
Confidence            22      224689999999998875544   4899999999999999999999754321      11111111111   


Q ss_pred             ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       581 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                        .+.+....    ...+.+++..||+.||++|||++|+++.|+.
T Consensus       229 --~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~~il~~L~~  267 (271)
T 3kmu_A          229 --RPTIPPGI----SPHVSKLMKICMNEDPAKRPKFDMIVPILEK  267 (271)
T ss_dssp             --CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --CCCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence              11222222    2457788899999999999999999999864

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=6.7e-40  Score=353.47  Aligned_cols=267  Identities=24%  Similarity=0.304  Sum_probs=212.8

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC--eEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK--ELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~--~~~lV  427 (645)
                      .++|...++||+|+||.||+|++..+++.||||++.... ....+.+.+|++++.+++||||+++++++...+  ..++|
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            356888999999999999999999999999999997543 334577889999999999999999999998755  78999


Q ss_pred             EEecCCCChhhhhhhcC--CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE----CCCCcEEEeeccCcc
Q 042831          428 YEFMPNGSLDSHLFKEN--SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML----DSNFNAKIGDFGLAR  501 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl----d~~~~~kl~DfGla~  501 (645)
                      |||+++|+|.+++....  ..+++..++.++.||+.||.|||+   .+|+||||||+|||+    +.++.+||+|||+++
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~  164 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence            99999999999997532  349999999999999999999999   899999999999999    788889999999998


Q ss_pred             cccccCCcceeecccCccccCcccccc--------CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCC-chhHHHHHHHH
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATT--------GKASKESDVYSFGIVALEIACGRKPINPKAPQG-QVSLLQWVWDL  572 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~-~~~l~~~~~~~  572 (645)
                      ......  ......||+.|+|||++..        ..++.++|||||||++|||++|+.||....... .....   ...
T Consensus       165 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~---~~~  239 (396)
T 4eut_A          165 ELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM---YKI  239 (396)
T ss_dssp             ECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHH---HHH
T ss_pred             EccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHH---HHH
Confidence            654322  2334579999999998865        467889999999999999999999997544322 22222   222


Q ss_pred             hcCC---cccccc-----------CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          573 YGNG---KLLEAV-----------DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       573 ~~~~---~l~~~~-----------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....   .+....           +..............+..++..||+.||++||+++|+++.++.
T Consensus       240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~  306 (396)
T 4eut_A          240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD  306 (396)
T ss_dssp             HHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred             hcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHH
Confidence            2111   100000           0011123446677888899999999999999999999988864

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=2.5e-40  Score=341.13  Aligned_cols=259  Identities=27%  Similarity=0.393  Sum_probs=205.1

Q ss_pred             HHHHhhcCCCCCC-ccCcCCcEEEEEEEE--cCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeee
Q 042831          346 ELALATNDFNDDQ-KLGQGGFGGVYKGFF--RETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHE  420 (645)
Q Consensus       346 el~~~~~~f~~~~-~LG~G~fG~Vy~g~~--~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~  420 (645)
                      ++....++|...+ .||+|+||.||+|.+  ..+++.||||++....  ....+++.+|++++.+++||||+++++++ .
T Consensus        10 ~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~   88 (291)
T 1xbb_A           10 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E   88 (291)
T ss_dssp             -CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred             eeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C
Confidence            3334456677777 899999999999955  4567899999987542  33467899999999999999999999999 5


Q ss_pred             CCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCc
Q 042831          421 KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA  500 (645)
Q Consensus       421 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla  500 (645)
                      .+..++||||+++++|.+++.. ...+++..++.++.||+.||.|||+   .+++||||||+||+++.++.+||+|||++
T Consensus        89 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~  164 (291)
T 1xbb_A           89 AESWMLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLS  164 (291)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred             CCCcEEEEEeCCCCCHHHHHHh-CcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcc
Confidence            6778999999999999999965 3568999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccccCCcc--eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCc
Q 042831          501 RLVEHAKGSQ--TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGK  577 (645)
Q Consensus       501 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~  577 (645)
                      +.........  .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......   .    +......+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~----~~~~~~~~~  237 (291)
T 1xbb_A          165 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---E----VTAMLEKGE  237 (291)
T ss_dssp             EECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---H----HHHHHHTTC
T ss_pred             eeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH---H----HHHHHHcCC
Confidence            8765433221  122346788999999988889999999999999999999 99999754321   1    112222222


Q ss_pred             cccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          578 LLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       578 l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .     +.....    ....+.+++..||+.||++||++.++++.|+.
T Consensus       238 ~-----~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  276 (291)
T 1xbb_A          238 R-----MGCPAG----CPREMYDLMNLCWTYDVENRPGFAAVELRLRN  276 (291)
T ss_dssp             C-----CCCCTT----CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             C-----CCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            1     111112    23467788899999999999999999999873

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=8.9e-41  Score=343.63  Aligned_cols=257  Identities=23%  Similarity=0.309  Sum_probs=193.1

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hh-hHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQ-GIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~-~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ..++|...+.||+|+||.||+|.+..+++.||+|++.... .. ..+.+.++...++.++||||+++++++.+++..++|
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence            4567888999999999999999999899999999997542 22 233444555567888999999999999999999999


Q ss_pred             EEecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhcCC-CeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          428 YEFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEWEQ-CVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      |||++ |+|.+++..   .+..+++..++.++.|++.||.|||+   + +++||||||+||+++.++.+||+|||+++..
T Consensus        85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            99996 588777753   45689999999999999999999998   6 9999999999999999999999999999865


Q ss_pred             cccCCcceeecccCccccCcccc----ccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccc
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECA----TTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL  579 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~  579 (645)
                      ....  ......||+.|+|||.+    .+..++.++||||||+++|||++|+.||......  .   ...........  
T Consensus       161 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~---~~~~~~~~~~~--  231 (290)
T 3fme_A          161 VDDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP--F---QQLKQVVEEPS--  231 (290)
T ss_dssp             -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH--H---HHHHHHHHSCC--
T ss_pred             cccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch--H---HHHHHHhccCC--
Confidence            4322  22334689999999996    5567899999999999999999999999743321  1   11111111111  


Q ss_pred             cccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       580 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                          +....   ......+.+++.+||+.||++|||++|+++|.++.
T Consensus       232 ----~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~  271 (290)
T 3fme_A          232 ----PQLPA---DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT  271 (290)
T ss_dssp             ----CCCCT---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             ----CCccc---ccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccc
Confidence                11110   11224577888999999999999999999998864

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.6e-39  Score=346.52  Aligned_cols=270  Identities=21%  Similarity=0.280  Sum_probs=210.1

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC-----C
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEK-----K  422 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~-----~  422 (645)
                      ...++|...+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++.+++||||+++++++...     .
T Consensus        24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  103 (364)
T 3qyz_A           24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK  103 (364)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence            34568999999999999999999999999999999997543 34457889999999999999999999998754     4


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      ..++||||++ |+|.+++..  ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus       104 ~~~iv~e~~~-~~L~~~l~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~  177 (364)
T 3qyz_A          104 DVYIVQDLME-TDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARV  177 (364)
T ss_dssp             CEEEEEECCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             eEEEEEcccC-cCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence            6899999996 689888854  358999999999999999999999   8999999999999999999999999999987


Q ss_pred             ccccCCc--ceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccc
Q 042831          503 VEHAKGS--QTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL  579 (645)
Q Consensus       503 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~  579 (645)
                      .......  ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+.   ...+....+.....
T Consensus       178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~i~~~~~~~~~~  254 (364)
T 3qyz_A          178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ---LNHILGILGSPSQE  254 (364)
T ss_dssp             CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH---HHHHHHHHCSCCHH
T ss_pred             cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH---HHHHHHHhCCCCHH
Confidence            6533221  12445799999999987654 489999999999999999999999976543322   22222111111000


Q ss_pred             ---cccC--------c-cccCCCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          580 ---EAVD--------P-RLCRDFDG-----QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       580 ---~~~d--------~-~l~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                         ...+        . .-....+.     .....+.+++.+||+.||++|||++|+++|.++..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  319 (364)
T 3qyz_A          255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ  319 (364)
T ss_dssp             HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhh
Confidence               0000        0 00000000     11245778899999999999999999999999864

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=6.7e-40  Score=341.44  Aligned_cols=257  Identities=27%  Similarity=0.386  Sum_probs=207.5

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ..++|...+.||+|+||.||+|.+..+|+.||+|.+....  ..+++.+|+.++.+++||||+++++++...+..++|||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            3467888999999999999999999999999999987543  34678899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+++++|.+++......+++..++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++....... .
T Consensus       105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~  180 (314)
T 3com_A          105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-A  180 (314)
T ss_dssp             CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-S
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-c
Confidence            999999999997667789999999999999999999999   899999999999999999999999999997654322 2


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      ......|+..|+|||.+.+..++.++||||||+++|||++|+.||......      .......... ......+.    
T Consensus       181 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~-~~~~~~~~----  249 (314)
T 3com_A          181 KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM------RAIFMIPTNP-PPTFRKPE----  249 (314)
T ss_dssp             CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHSC-CCCCSSGG----
T ss_pred             ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhcCC-CcccCCcc----
Confidence            233456899999999999989999999999999999999999999753321      1111111111 00000111    


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                         .....+.+++.+||+.||++|||+.+++++.++.
T Consensus       250 ---~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~  283 (314)
T 3com_A          250 ---LWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVR  283 (314)
T ss_dssp             ---GSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHH
T ss_pred             ---cCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHh
Confidence               1124677888999999999999999999998865

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=2.3e-41  Score=362.47  Aligned_cols=247  Identities=16%  Similarity=0.174  Sum_probs=194.8

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHH---HHHHhcCCCCccEEE-------e
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEV---KIISRLRHRNLVQLL-------G  416 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei---~~l~~l~H~nlv~l~-------~  416 (645)
                      ..++|...+.||+|+||.||+|++..+|+.||||++...   .....+.+.+|+   +.+++++||||++++       +
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            356788899999999999999999888999999998743   344567899999   455566899999998       5


Q ss_pred             eeeeCC-----------------eEEEEEEecCCCChhhhhhhcC------CCCCHHHHHHHHHHHHHHHHHHHhhcCCC
Q 042831          417 WCHEKK-----------------ELLLVYEFMPNGSLDSHLFKEN------SLLTWEFRYKIAQDLASGLLYLQEEWEQC  473 (645)
Q Consensus       417 ~~~~~~-----------------~~~lV~Ey~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~  473 (645)
                      ++...+                 ..++||||+ +|+|.+++...+      ..+++..++.|+.||+.||.|||+   .+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~  226 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YG  226 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CC
Confidence            655443                 278999999 689999997532      234468899999999999999999   89


Q ss_pred             eeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeecccCccccCccccccC-----------CCCcchhHHHHHH
Q 042831          474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG-----------KASKESDVYSFGI  542 (645)
Q Consensus       474 ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~t~~sDV~SfGv  542 (645)
                      |+||||||+|||++.++.+||+|||+++...    .......| +.|+|||++.+.           .++.++|||||||
T Consensus       227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~----~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~  301 (377)
T 3byv_A          227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG----ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL  301 (377)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCGGGCEETT----CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred             eecCCCCHHHEEEcCCCCEEEEechhheecC----CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence            9999999999999999999999999998532    23345567 999999999887           8999999999999


Q ss_pred             HHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 042831          543 VALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHV  622 (645)
Q Consensus       543 ll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  622 (645)
                      ++|||++|+.||..........                .+.+. ...++    ..+.+++.+||+.||++|||+.|++++
T Consensus       302 il~elltg~~Pf~~~~~~~~~~----------------~~~~~-~~~~~----~~~~~li~~~L~~dp~~Rpt~~e~l~h  360 (377)
T 3byv_A          302 VIYWIWCADLPITKDAALGGSE----------------WIFRS-CKNIP----QPVRALLEGFLRYPKEDRLLPLQAMET  360 (377)
T ss_dssp             HHHHHHHSSCCC------CCSG----------------GGGSS-CCCCC----HHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred             HHHHHHHCCCCCcccccccchh----------------hhhhh-ccCCC----HHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence            9999999999997544322111                00010 12222    456778899999999999999999998


Q ss_pred             hccC
Q 042831          623 LNFE  626 (645)
Q Consensus       623 L~~~  626 (645)
                      .++.
T Consensus       361 p~f~  364 (377)
T 3byv_A          361 PEYE  364 (377)
T ss_dssp             HHHH
T ss_pred             hHHH
Confidence            8753

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.8e-40  Score=353.47  Aligned_cols=254  Identities=28%  Similarity=0.422  Sum_probs=196.1

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCC---CeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee-CCeEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRET---NSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE-KKELLLV  427 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~---~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~-~~~~~lV  427 (645)
                      .|...++||+|+||.||+|.+..+   +..||+|.+... .....+++.+|+.++++++||||++++++|.. ++..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            456678999999999999997543   246899998654 34566889999999999999999999998754 5678999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+++|+|.+++......+++..++.++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus       170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~  246 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  246 (373)
T ss_dssp             EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence            99999999999998777789999999999999999999999   899999999999999999999999999998654322


Q ss_pred             Cc---ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          508 GS---QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       508 ~~---~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ..   ......+++.|+|||++.+..++.++|||||||++|||++ |..||......+.   ...    ..++..  ...
T Consensus       247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~---~~~----~~~~~~--~~~  317 (373)
T 3c1x_A          247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI---TVY----LLQGRR--LLQ  317 (373)
T ss_dssp             -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH---HHH----HHTTCC--CCC
T ss_pred             cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH---HHH----HHcCCC--CCC
Confidence            11   1233457789999999999999999999999999999999 6777765443321   111    112211  111


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      +   ..+    ...+.+++.+||+.||++|||++|+++.|+.
T Consensus       318 p---~~~----~~~l~~li~~cl~~dp~~RPs~~ell~~L~~  352 (373)
T 3c1x_A          318 P---EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISA  352 (373)
T ss_dssp             C---TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             C---CCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            1   112    2457788899999999999999999999974

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=3.2e-40  Score=337.17  Aligned_cols=257  Identities=23%  Similarity=0.381  Sum_probs=203.6

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      .++|...+.||+|+||.||+|.+..+++.||||.+....   ....+.+.+|+.++.+++||||+++++++...+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            467888999999999999999999889999999986532   23456788999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+++++|.+++... ..+++..+..++.||+.||.|||+   .+++|+||||+||+++.++.+||+|||++.......
T Consensus        90 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~  165 (276)
T 2h6d_A           90 MEYVSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE  165 (276)
T ss_dssp             EECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred             EeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence            9999999999998654 458999999999999999999999   899999999999999999999999999998654322


Q ss_pred             CcceeecccCccccCccccccCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~-t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                        ......+++.|+|||.+.+..+ +.++||||||++++||++|+.||.....   ..+.    .....+..      .+
T Consensus       166 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~----~~~~~~~~------~~  230 (276)
T 2h6d_A          166 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV---PTLF----KKIRGGVF------YI  230 (276)
T ss_dssp             -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHH----HHHHHCCC------CC
T ss_pred             --ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH---HHHH----HHhhcCcc------cC
Confidence              2234568999999999988765 6899999999999999999999975321   1111    11111111      11


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLP  630 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  630 (645)
                      ....    ...+..++.+||+.||++|||++|++++.++...+|
T Consensus       231 ~~~~----~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~  270 (276)
T 2h6d_A          231 PEYL----NRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP  270 (276)
T ss_dssp             CTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred             chhc----CHHHHHHHHHHccCChhhCCCHHHHHhChhhccCch
Confidence            1112    235677889999999999999999999998865544

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=6.7e-40  Score=350.32  Aligned_cols=264  Identities=21%  Similarity=0.227  Sum_probs=199.3

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC------
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK------  422 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~------  422 (645)
                      .++|...+.||+|+||.||+|++..+++.||||++...  .....+.+.+|+.++++++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            46889999999999999999999999999999998753  3445677889999999999999999999987654      


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      ..++||||++ ++|.+.+.   ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus       104 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~  176 (371)
T 2xrw_A          104 DVYIVMELMD-ANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART  176 (371)
T ss_dssp             EEEEEEECCS-EEHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred             ceEEEEEcCC-CCHHHHHh---hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence            7899999996 57877774   348999999999999999999999   8999999999999999999999999999986


Q ss_pred             ccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHH----------
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDL----------  572 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~----------  572 (645)
                      ....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+...          
T Consensus       177 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~  251 (371)
T 2xrw_A          177 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI---DQWNKVIEQLGTPCPEFMK  251 (371)
T ss_dssp             ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHC-CCCCCHHHHT
T ss_pred             cccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCCHHHHH
Confidence            5432  2233457899999999999989999999999999999999999999754321   111111100          


Q ss_pred             ---------hcCC-c-----cccccCccccCCC---CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          573 ---------YGNG-K-----LLEAVDPRLCRDF---DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       573 ---------~~~~-~-----l~~~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                               ..+. .     +...+.....+..   .......+.+++.+||+.||++|||++|+++|.++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~  323 (371)
T 2xrw_A          252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN  323 (371)
T ss_dssp             TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHH
T ss_pred             HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchh
Confidence                     0000 0     0000000000000   112356788999999999999999999999999875

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=4.3e-40  Score=348.22  Aligned_cols=265  Identities=18%  Similarity=0.199  Sum_probs=200.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcC---CCeEEEEEEeccCChh-----------hHHHHHHHHHHHHhcCCCCccEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRE---TNSYIAVKRVSQGSKQ-----------GIKEYASEVKIISRLRHRNLVQLLG  416 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~Ei~~l~~l~H~nlv~l~~  416 (645)
                      .++|...+.||+|+||.||+|.+..   ++..+|+|+.......           ..+.+.+|+..+..++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            4678899999999999999999986   6789999998765322           1234678889999999999999999


Q ss_pred             eeee----CCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC--
Q 042831          417 WCHE----KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF--  490 (645)
Q Consensus       417 ~~~~----~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~--  490 (645)
                      ++..    ....++||||+ +++|.+++...+ .+++..++.++.||+.||.|||+   .+|+||||||+|||++.++  
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~  190 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPD  190 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSSTT
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCCCC
Confidence            9987    67899999999 999999986544 79999999999999999999999   8999999999999998877  


Q ss_pred             cEEEeeccCcccccccCC------cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchh
Q 042831          491 NAKIGDFGLARLVEHAKG------SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVS  564 (645)
Q Consensus       491 ~~kl~DfGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~  564 (645)
                      .+||+|||+++.......      .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .
T Consensus       191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-~  269 (345)
T 2v62_A          191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV-A  269 (345)
T ss_dssp             SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH-H
T ss_pred             cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH-H
Confidence            999999999987643221      112345799999999999999999999999999999999999999964322211 1


Q ss_pred             HHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          565 LLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       565 l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                       ......... ..+...+......   ......+.+++..||+.||++||+++++++.|+..
T Consensus       270 -~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  326 (345)
T 2v62_A          270 -VQTAKTNLL-DELPQSVLKWAPS---GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH  326 (345)
T ss_dssp             -HHHHHHHHH-HTTTHHHHHHSCT---TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred             -HHHHHHhhc-ccccHHHHhhccc---cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence             111111110 0111111000000   01224677888999999999999999999999864

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.7e-40  Score=345.80  Aligned_cols=263  Identities=25%  Similarity=0.411  Sum_probs=210.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEE----cCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC--eE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFF----RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK--EL  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~----~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~--~~  424 (645)
                      .++|...+.||+|+||.||++++    ..+++.||||++........+.+.+|++++.+++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            35678889999999999999984    5678999999998777777788999999999999999999999987654  78


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++||||+++++|.+++......+++..++.++.||+.||.|||+   .+|+||||||+||+++.++.+||+|||+++...
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~  196 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLP  196 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred             EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence            99999999999999998777789999999999999999999999   899999999999999999999999999998765


Q ss_pred             ccCCcc--eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCC---------CCCchhHHHHHHHHh
Q 042831          505 HAKGSQ--TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKA---------PQGQVSLLQWVWDLY  573 (645)
Q Consensus       505 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~---------~~~~~~l~~~~~~~~  573 (645)
                      ......  .....++..|+|||.+.+..++.++||||||+++|||++|+.|+....         ..........+.+..
T Consensus       197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (326)
T 2w1i_A          197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL  276 (326)
T ss_dssp             SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred             ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHh
Confidence            433211  123456778999999998889999999999999999999999886321         000011111112222


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..+...     ....    .....+.+++.+||+.||++|||++|+++.|+.
T Consensus       277 ~~~~~~-----~~~~----~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~  319 (326)
T 2w1i_A          277 KNNGRL-----PRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ  319 (326)
T ss_dssp             HTTCCC-----CCCT----TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             hcCCCC-----CCCC----cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            221111     1111    223467788899999999999999999999864

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=7.1e-40  Score=338.61  Aligned_cols=255  Identities=28%  Similarity=0.429  Sum_probs=202.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCC---CeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeee-eCCeEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRET---NSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCH-EKKELLL  426 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~---~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~-~~~~~~l  426 (645)
                      .+|...++||+|+||.||+|.+..+   ...||+|.+... .....+.+.+|+.++++++||||++++++|. .++..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            4677889999999999999997543   346999998764 3455678999999999999999999999865 4567899


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++|+|.+++......+++..++.++.|++.||.|||+   ++++||||||+||+++.++.+||+|||+++.....
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  181 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  181 (298)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred             EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECccccccccccc
Confidence            999999999999998777789999999999999999999999   89999999999999999999999999999865432


Q ss_pred             CC---cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          507 KG---SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       507 ~~---~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      ..   .......+|+.|+|||.+.+..++.++||||||+++|||++ |..||......+   .....    ..+..  ..
T Consensus       182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~~~----~~~~~--~~  252 (298)
T 3f66_A          182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYL----LQGRR--LL  252 (298)
T ss_dssp             GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HHHHH----HTTCC--CC
T ss_pred             chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HHHHH----hcCCC--CC
Confidence            21   12334567889999999999999999999999999999999 556665443322   11111    11111  01


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .+   ...    ...+.+++.+||+.||++|||++|+++.|+.
T Consensus       253 ~~---~~~----~~~l~~li~~~l~~~p~~Rps~~ell~~L~~  288 (298)
T 3f66_A          253 QP---EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISA  288 (298)
T ss_dssp             CC---TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CC---ccC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            11   111    2357788899999999999999999999974

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1.3e-40  Score=355.74  Aligned_cols=254  Identities=25%  Similarity=0.322  Sum_probs=200.0

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHH-HHhcCCCCccEEEeeeeeCCeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKI-ISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~-l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .++|...+.||+|+||.||+++++.+++.||||++....   ....+.+.+|..+ ++.++||||+++++++.+.+..++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            467888999999999999999999999999999997542   2334566777776 467899999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++|+|.+++.+. ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus       117 v~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~  192 (373)
T 2r5t_A          117 VLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH  192 (373)
T ss_dssp             EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred             EEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence            99999999999998654 468899999999999999999998   89999999999999999999999999999854322


Q ss_pred             CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                       ........||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..+.+.    +.++.+      .+
T Consensus       193 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~---~~~~~~----i~~~~~------~~  258 (373)
T 2r5t_A          193 -NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT---AEMYDN----ILNKPL------QL  258 (373)
T ss_dssp             -CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH---HHHHHH----HHHSCC------CC
T ss_pred             -CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH---HHHHHH----HHhccc------CC
Confidence             2234456899999999999999999999999999999999999999975332   111111    111111      11


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHhccC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSI----RQVIHVLNFE  626 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~----~evl~~L~~~  626 (645)
                      ...++    ..+..++.+||+.||++||++    +++++|.++.
T Consensus       259 ~~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~  298 (373)
T 2r5t_A          259 KPNIT----NSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFS  298 (373)
T ss_dssp             CSSSC----HHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGT
T ss_pred             CCCCC----HHHHHHHHHHcccCHHhCCCCCCCHHHHhCCcccc
Confidence            12222    356778899999999999987    5888888764

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=3e-40  Score=346.55  Aligned_cols=258  Identities=28%  Similarity=0.418  Sum_probs=204.4

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEE-----EcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGF-----FRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE  423 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~-----~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~  423 (645)
                      ..++|...+.||+|+||.||+|+     ...+++.||||.+... ......++.+|+.++.+++||||+++++++...+.
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  107 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence            34678899999999999999999     4456789999999754 44556789999999999999999999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhcC------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC---CCcEEE
Q 042831          424 LLLVYEFMPNGSLDSHLFKEN------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKI  494 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~---~~~~kl  494 (645)
                      .++||||+++++|.+++....      ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.   +..+||
T Consensus       108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl  184 (327)
T 2yfx_A          108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKI  184 (327)
T ss_dssp             CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEE
Confidence            999999999999999997643      458999999999999999999999   89999999999999984   456999


Q ss_pred             eeccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHH
Q 042831          495 GDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDL  572 (645)
Q Consensus       495 ~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~  572 (645)
                      +|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......   .+..    .
T Consensus       185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~----~  257 (327)
T 2yfx_A          185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ---EVLE----F  257 (327)
T ss_dssp             CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHH----H
T ss_pred             CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH---HHHH----H
Confidence            99999976543222 22234567889999999999999999999999999999998 99999754321   1222    2


Q ss_pred             hcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          573 YGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       573 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ...+...     .....+    ...+.+++..||+.||++||++.+++++|+.-
T Consensus       258 ~~~~~~~-----~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          258 VTSGGRM-----DPPKNC----PGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             HHTTCCC-----CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhcCCCC-----CCCCCC----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            2222111     111122    24577888999999999999999999999863

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=3e-39  Score=340.46  Aligned_cols=274  Identities=26%  Similarity=0.350  Sum_probs=213.2

Q ss_pred             CccChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHh--cCCCCccEEEee
Q 042831          340 KRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISR--LRHRNLVQLLGW  417 (645)
Q Consensus       340 ~~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nlv~l~~~  417 (645)
                      ...+........++|...+.||+|+||.||+|++.  ++.||||++...   ..+.+.+|++++..  ++||||++++++
T Consensus        30 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~  104 (342)
T 1b6c_B           30 SGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAA  104 (342)
T ss_dssp             SSSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEE
T ss_pred             CCCceeecccccccEEEEeeecCCCCcEEEEEEEc--CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEee
Confidence            34555555566789999999999999999999984  899999998643   34577889999988  789999999999


Q ss_pred             eeeCC----eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhc-----CCCeeeccCCCCCeEECC
Q 042831          418 CHEKK----ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW-----EQCVVHRDIKSSNIMLDS  488 (645)
Q Consensus       418 ~~~~~----~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~Dlkp~NILld~  488 (645)
                      +....    ..++||||+++|+|.+++.+  ..+++..++.++.|++.||.|||...     +.+|+||||||+|||++.
T Consensus       105 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~  182 (342)
T 1b6c_B          105 DNKDNGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK  182 (342)
T ss_dssp             EECCCSSCCCEEEEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECT
T ss_pred             ecccCCccceeEEEEeecCCCcHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECC
Confidence            98775    89999999999999999964  35899999999999999999999211     289999999999999999


Q ss_pred             CCcEEEeeccCcccccccCCc---ceeecccCccccCccccccCC------CCcchhHHHHHHHHHHHHcC---------
Q 042831          489 NFNAKIGDFGLARLVEHAKGS---QTTVLAGTMGYMAPECATTGK------ASKESDVYSFGIVALEIACG---------  550 (645)
Q Consensus       489 ~~~~kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~t~~sDV~SfGvll~elltG---------  550 (645)
                      ++.+||+|||+++........   ......||+.|+|||++.+..      ++.++|||||||++|||++|         
T Consensus       183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~  262 (342)
T 1b6c_B          183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED  262 (342)
T ss_dssp             TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred             CCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccc
Confidence            999999999999876543322   123457899999999987753      34789999999999999999         


Q ss_pred             -CCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          551 -RKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       551 -~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                       +.||......... ... .............+....   ...+....+.+++.+||+.||++|||++|++++|+.
T Consensus       263 ~~~p~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~  333 (342)
T 1b6c_B          263 YQLPYYDLVPSDPS-VEE-MRKVVCEQKLRPNIPNRW---QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  333 (342)
T ss_dssp             CCCTTTTTSCSSCC-HHH-HHHHHTTSCCCCCCCGGG---GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             cccCccccCcCccc-HHH-HHHHHHHHHhCCCCcccc---cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence             7788654432211 111 122222222211111111   123566788999999999999999999999999974

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=6.1e-40  Score=349.03  Aligned_cols=276  Identities=22%  Similarity=0.233  Sum_probs=208.2

Q ss_pred             ChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-----------hhhHHHHHHHHHHHHhcCCCCc
Q 042831          343 PYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-----------KQGIKEYASEVKIISRLRHRNL  411 (645)
Q Consensus       343 ~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-----------~~~~~~~~~Ei~~l~~l~H~nl  411 (645)
                      ..+++....++|...+.||+|+||.||+|.+.. |+.||||++....           ....+.+.+|++++.+++||||
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            456788889999999999999999999999865 8999999985432           1224789999999999999999


Q ss_pred             cEEEeeeee-----CCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE
Q 042831          412 VQLLGWCHE-----KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML  486 (645)
Q Consensus       412 v~l~~~~~~-----~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl  486 (645)
                      +++++++..     ....++||||++ |+|.+++......+++..+..++.||+.||.|||+   .+|+||||||+|||+
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~  167 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILL  167 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEE
T ss_pred             cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEE
Confidence            999999843     346899999997 68888887777789999999999999999999999   899999999999999


Q ss_pred             CCCCcEEEeeccCcccccccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhH
Q 042831          487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSL  565 (645)
Q Consensus       487 d~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l  565 (645)
                      +.++.+||+|||+++.....  .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......   ..
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~  242 (362)
T 3pg1_A          168 ADNNDITICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY---NQ  242 (362)
T ss_dssp             CTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HH
T ss_pred             cCCCCEEEEecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH---HH
Confidence            99999999999999754322  22344578999999999877 67899999999999999999999999754321   22


Q ss_pred             HHHHHHHhcCCccc-----------cccCccccC--C-----CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          566 LQWVWDLYGNGKLL-----------EAVDPRLCR--D-----FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       566 ~~~~~~~~~~~~l~-----------~~~d~~l~~--~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ...+.+........           +.+...+..  .     ........+.+++.+||+.||++|||++|+++|.++..
T Consensus       243 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  322 (362)
T 3pg1_A          243 LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFES  322 (362)
T ss_dssp             HHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhh
Confidence            22222221111110           000000000  0     00011245778899999999999999999999999875


Q ss_pred             C
Q 042831          628 P  628 (645)
Q Consensus       628 ~  628 (645)
                      -
T Consensus       323 ~  323 (362)
T 3pg1_A          323 L  323 (362)
T ss_dssp             T
T ss_pred             c
Confidence            3

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1.3e-39  Score=341.80  Aligned_cols=262  Identities=20%  Similarity=0.261  Sum_probs=205.9

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCCccEEEeeeee--CCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLGWCHE--KKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~--~~~~~lV~  428 (645)
                      ++|...++||+|+||.||+|++..+++.||||++....   .+.+.+|++++.+++ ||||+++++++..  ....++||
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            67888999999999999999999999999999986443   467889999999997 9999999999987  66789999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC-cEEEeeccCcccccccC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF-NAKIGDFGLARLVEHAK  507 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~-~~kl~DfGla~~~~~~~  507 (645)
                      ||+++++|.+++.    .+++..+..++.||+.||.|||+   .+|+||||||+|||++.++ .+||+|||+++......
T Consensus       113 e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~  185 (330)
T 3nsz_A          113 EHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ  185 (330)
T ss_dssp             ECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred             eccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence            9999999998884    38899999999999999999998   8999999999999999776 89999999998654332


Q ss_pred             CcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc-----
Q 042831          508 GSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA-----  581 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~-----  581 (645)
                        ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......  ..............+.+.     
T Consensus       186 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~  261 (330)
T 3nsz_A          186 --EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY--DQLVRIAKVLGTEDLYDYIDKYN  261 (330)
T ss_dssp             --CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH--HHHHHHHHHHCHHHHHHHHHHTT
T ss_pred             --ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH--HHHHHHHHhcCCchhhhHHHHhc
Confidence              2334578999999999877 668999999999999999999999996443221  111111111000000000     


Q ss_pred             --cCc----------------cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          582 --VDP----------------RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       582 --~d~----------------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                        .++                .............+.+++.+||+.||++|||++|+++|.++..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  325 (330)
T 3nsz_A          262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT  325 (330)
T ss_dssp             CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhh
Confidence              000                0001111112356788899999999999999999999999864

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.3e-40  Score=372.78  Aligned_cols=260  Identities=29%  Similarity=0.458  Sum_probs=210.5

Q ss_pred             HHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE
Q 042831          345 KELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       345 ~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~  424 (645)
                      ..+....++|...++||+|+||.||+|.+.. +..||||+++... ...++|.+|+++|.+++||||++++++|.+ +..
T Consensus       260 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~  336 (535)
T 2h8h_A          260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI  336 (535)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             cceecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence            3444556778889999999999999999976 5679999997543 335689999999999999999999999876 678


Q ss_pred             EEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          425 LLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      +||||||++|+|.+++... +..+++..++.|+.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus       337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  413 (535)
T 2h8h_A          337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI  413 (535)
T ss_dssp             EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred             eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence            9999999999999999753 4568999999999999999999999   89999999999999999999999999999865


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      ............++..|+|||++..+.++.++|||||||+||||++ |+.||......   .+.    .....+....  
T Consensus       414 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~---~~~----~~i~~~~~~~--  484 (535)
T 2h8h_A          414 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVL----DQVERGYRMP--  484 (535)
T ss_dssp             CCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH---HHH----HHHHTTCCCC--
T ss_pred             CCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHH----HHHHcCCCCC--
Confidence            4322112223456788999999999999999999999999999999 99999754321   112    2222221111  


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                         ...    .....+.+++..||+.||++|||++++++.|+.-
T Consensus       485 ---~~~----~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~  521 (535)
T 2h8h_A          485 ---CPP----ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  521 (535)
T ss_dssp             ---CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             ---CCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence               111    1234677888999999999999999999999853

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-39  Score=347.39  Aligned_cols=263  Identities=22%  Similarity=0.299  Sum_probs=202.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC------C
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK------K  422 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~------~  422 (645)
                      .++|...+.||+|+||.||+|++..+|+.||||++...  .....+.+.+|++++++++||||+++++++...      .
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46788899999999999999999999999999998543  344567889999999999999999999998765      3


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      ..++||||+ +++|.+++..  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  177 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQ  177 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             eEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence            569999999 8899998865  468999999999999999999999   8999999999999999999999999999986


Q ss_pred             ccccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCc----
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK----  577 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~----  577 (645)
                      ...    ......+|+.|+|||++.+ ..++.++||||+||+++||++|+.||......   .....+....+...    
T Consensus       178 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~l~~i~~~~g~~~~~~~  250 (367)
T 1cm8_A          178 ADS----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL---DQLKEIMKVTGTPPAEFV  250 (367)
T ss_dssp             CCS----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHHCCCCHHHH
T ss_pred             ccc----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHhcCCCCHHHH
Confidence            542    2334578999999999877 67999999999999999999999999754422   12221211111100    


Q ss_pred             --------------cccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          578 --------------LLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       578 --------------l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                                    +.......+. .........+.+++.+||+.||++|||++|+++|.++..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~  313 (367)
T 1cm8_A          251 QRLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES  313 (367)
T ss_dssp             HTCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred             HHhhhHHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHh
Confidence                          0000000000 000112345778889999999999999999999999863

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.8e-39  Score=346.18  Aligned_cols=262  Identities=23%  Similarity=0.341  Sum_probs=210.9

Q ss_pred             HHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh--------hhHHHHHHHHHHHHhc-CCCCccEEEe
Q 042831          346 ELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK--------QGIKEYASEVKIISRL-RHRNLVQLLG  416 (645)
Q Consensus       346 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l-~H~nlv~l~~  416 (645)
                      ......++|...+.||+|+||.||+|++..+|+.||||++.....        ...+.+.+|+.++.++ +||||+++++
T Consensus        88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~  167 (365)
T 2y7j_A           88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID  167 (365)
T ss_dssp             HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred             hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence            334455679999999999999999999998899999999865431        2245678999999999 7999999999


Q ss_pred             eeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEee
Q 042831          417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD  496 (645)
Q Consensus       417 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~D  496 (645)
                      ++...+..++||||+++++|.+++... ..+++..+..++.||+.||.|||+   .+++||||||+|||++.++.+||+|
T Consensus       168 ~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~D  243 (365)
T 2y7j_A          168 SYESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSD  243 (365)
T ss_dssp             EEEBSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECC
T ss_pred             EEeeCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEe
Confidence            999999999999999999999998643 468999999999999999999999   8999999999999999999999999


Q ss_pred             ccCcccccccCCcceeecccCccccCcccccc------CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHH
Q 042831          497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATT------GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVW  570 (645)
Q Consensus       497 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~  570 (645)
                      ||++......  .......||+.|+|||++.+      ..++.++|||||||++|||++|+.||.....   ......  
T Consensus       244 fG~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~---~~~~~~--  316 (365)
T 2y7j_A          244 FGFSCHLEPG--EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ---ILMLRM--  316 (365)
T ss_dssp             CTTCEECCTT--CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHH--
T ss_pred             cCcccccCCC--cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH---HHHHHH--
Confidence            9999866532  22344679999999998863      3578899999999999999999999975321   111111  


Q ss_pred             HHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          571 DLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       571 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                        ...+.... ..+.. ...    ...+..++.+||+.||++|||++|++++.+++
T Consensus       317 --i~~~~~~~-~~~~~-~~~----~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          317 --IMEGQYQF-SSPEW-DDR----SSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             --HHHTCCCC-CHHHH-SSS----CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             --HHhCCCCC-CCccc-ccC----CHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence              11111110 00000 111    24577888999999999999999999999875

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=9e-41  Score=349.29  Aligned_cols=258  Identities=26%  Similarity=0.392  Sum_probs=203.6

Q ss_pred             CCCCCccCcCCcEEEEEEEE----cCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeee--CCeEEE
Q 042831          354 FNDDQKLGQGGFGGVYKGFF----RETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLL  426 (645)
Q Consensus       354 f~~~~~LG~G~fG~Vy~g~~----~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~--~~~~~l  426 (645)
                      |...++||+|+||.||++.+    ..+++.||||++.... ....+.+.+|++++++++||||+++++++.+  ....++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            47889999999999988865    3468999999997653 4556789999999999999999999999987  467899


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++|+|.+++...  .+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus       113 v~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  187 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG  187 (318)
T ss_dssp             EECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred             EEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence            99999999999999653  48999999999999999999999   89999999999999999999999999999876543


Q ss_pred             CCc--ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCC--------chhHHHHHHHHhcCC
Q 042831          507 KGS--QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQG--------QVSLLQWVWDLYGNG  576 (645)
Q Consensus       507 ~~~--~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~--------~~~l~~~~~~~~~~~  576 (645)
                      ...  ......++..|+|||.+.+..++.++||||||+++|||++|+.||.......        .........+....+
T Consensus       188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (318)
T 3lxp_A          188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG  267 (318)
T ss_dssp             CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred             ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence            321  2233567888999999999889999999999999999999999986422100        000001111111111


Q ss_pred             ccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       577 ~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .         ....+......+.+++.+||+.||++|||++|+++.|+.
T Consensus       268 ~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  307 (318)
T 3lxp_A          268 E---------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT  307 (318)
T ss_dssp             C---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             c---------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence            1         111112223567888899999999999999999999974

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=3.1e-39  Score=346.56  Aligned_cols=277  Identities=21%  Similarity=0.268  Sum_probs=215.2

Q ss_pred             cChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-CC-----CccEEE
Q 042831          342 FPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HR-----NLVQLL  415 (645)
Q Consensus       342 ~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~-----nlv~l~  415 (645)
                      +..++.....++|...++||+|+||.||+|++..+++.||||++... ....+++..|+.++..++ |+     ++++++
T Consensus        44 ~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  122 (382)
T 2vx3_A           44 YIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLK  122 (382)
T ss_dssp             BCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEE
T ss_pred             EEeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEee
Confidence            33444455678999999999999999999999999999999999643 344567788999998885 55     499999


Q ss_pred             eeeeeCCeEEEEEEecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC--CCCcE
Q 042831          416 GWCHEKKELLLVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD--SNFNA  492 (645)
Q Consensus       416 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld--~~~~~  492 (645)
                      +++...+..++||||++ ++|.+++.... ..+++..+..++.|++.||.|||.. +.+|+||||||+|||++  .++.+
T Consensus       123 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~  200 (382)
T 2vx3_A          123 RHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAI  200 (382)
T ss_dssp             EEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCE
T ss_pred             eeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcE
Confidence            99999999999999995 59999987653 5699999999999999999999951 37899999999999994  57889


Q ss_pred             EEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHH
Q 042831          493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDL  572 (645)
Q Consensus       493 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~  572 (645)
                      ||+|||+++....    ......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+...
T Consensus       201 kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~---~~~~~i~~~  273 (382)
T 2vx3_A          201 KIVDFGSSCQLGQ----RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV---DQMNKIVEV  273 (382)
T ss_dssp             EECCCTTCEETTC----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHH
T ss_pred             EEEeccCceeccc----ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHH
Confidence            9999999986542    223457899999999999999999999999999999999999999854422   222222221


Q ss_pred             hcCC---------cccccc----C-----------------ccc--------------------cCCCCHHHHHHHHHHH
Q 042831          573 YGNG---------KLLEAV----D-----------------PRL--------------------CRDFDGQQIERLMIVG  602 (645)
Q Consensus       573 ~~~~---------~l~~~~----d-----------------~~l--------------------~~~~~~~~~~~l~~l~  602 (645)
                      .+..         ...+.+    +                 +..                    .......+...+.+|+
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli  353 (382)
T 2vx3_A          274 LGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLI  353 (382)
T ss_dssp             HCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHH
T ss_pred             hCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHH
Confidence            1100         000000    0                 000                    0012234456788999


Q ss_pred             HHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          603 LWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       603 ~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      .+||+.||++|||++|+++|.|+...
T Consensus       354 ~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          354 LRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             HHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             HHhcCCChhhCCCHHHHhcCcccccC
Confidence            99999999999999999999998653

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=6e-40  Score=376.28  Aligned_cols=255  Identities=24%  Similarity=0.331  Sum_probs=212.5

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~  425 (645)
                      ..++|...+.||+|+||.||+|++..+++.||||+++..   .....+.+..|..++..+ +||||+++++++.+.+.++
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            456899999999999999999999999999999998753   233456788899999987 6999999999999999999


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      |||||+++|+|..++... ..+++..++.++.||+.||.|||+   .+|+||||||+||||+.++.+||+|||+++....
T Consensus       419 lV~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~  494 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW  494 (674)
T ss_dssp             EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred             EEEeCcCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence            999999999999999654 468999999999999999999999   8999999999999999999999999999985432


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      . ........||+.|+|||++.+..++.++|||||||+||||++|+.||.....   ..+.+    .+.++..      .
T Consensus       495 ~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~---~~~~~----~i~~~~~------~  560 (674)
T 3pfq_A          495 D-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DELFQ----SIMEHNV------A  560 (674)
T ss_dssp             T-TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHH----HHHSSCC------C
T ss_pred             C-CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH---HHHHH----HHHhCCC------C
Confidence            2 2234557899999999999999999999999999999999999999975432   12221    1222211      1


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHhccC
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSI-----RQVIHVLNFE  626 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~L~~~  626 (645)
                      +...    ....+..|+..||+.||++||++     +||++|.++.
T Consensus       561 ~p~~----~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~  602 (674)
T 3pfq_A          561 YPKS----MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFR  602 (674)
T ss_dssp             CCTT----SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGS
T ss_pred             CCcc----CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCcccc
Confidence            1111    23457788899999999999997     9999999875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=1e-39  Score=334.49  Aligned_cols=248  Identities=26%  Similarity=0.411  Sum_probs=205.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeee----------
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE----------  420 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~----------  420 (645)
                      .++|...+.||+|+||.||+|.+..+++.||+|++....    +.+.+|++++.+++||||+++++++..          
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   85 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK   85 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence            456888999999999999999999889999999997654    246689999999999999999998854          


Q ss_pred             ------CCeEEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEE
Q 042831          421 ------KKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK  493 (645)
Q Consensus       421 ------~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~k  493 (645)
                            ....++||||+++++|.+++... ...+++..++.++.||+.||.|||+   .+|+||||||+||+++.++.+|
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~k  162 (284)
T 2a19_B           86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVK  162 (284)
T ss_dssp             ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEE
T ss_pred             cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCEE
Confidence                  45689999999999999999754 4679999999999999999999999   8999999999999999999999


Q ss_pred             EeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHh
Q 042831          494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY  573 (645)
Q Consensus       494 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~  573 (645)
                      |+|||+++......  ......|++.|+|||.+.+..++.++||||||+++|||++|+.|+...         ...+...
T Consensus       163 l~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---------~~~~~~~  231 (284)
T 2a19_B          163 IGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET---------SKFFTDL  231 (284)
T ss_dssp             ECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH---------HHHHHHH
T ss_pred             ECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH---------HHHHHHh
Confidence            99999998664332  223456899999999999999999999999999999999999887421         1111222


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      ..+.+        ...++    ..+.+++.+||+.||++|||+.|++++|+.-..
T Consensus       232 ~~~~~--------~~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          232 RDGII--------SDIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             HTTCC--------CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             hcccc--------cccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            22222        12222    346678899999999999999999999986543

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=7.1e-40  Score=346.98  Aligned_cols=269  Identities=21%  Similarity=0.313  Sum_probs=207.3

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC-----Ce
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK-----KE  423 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~-----~~  423 (645)
                      ..++|...+.||+|+||.||+|++..+|+.||||++... .......+.+|++++.+++||||+++++++...     ..
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            356888999999999999999999999999999999754 334566788999999999999999999988754     67


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      .++||||+. ++|.+++..  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus        89 ~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (353)
T 2b9h_A           89 VYIIQELMQ-TDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARII  162 (353)
T ss_dssp             EEEEECCCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEeccC-ccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence            899999996 689888854  468999999999999999999999   89999999999999999999999999999876


Q ss_pred             cccCCc---------ceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHh
Q 042831          504 EHAKGS---------QTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY  573 (645)
Q Consensus       504 ~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~  573 (645)
                      ......         ......||+.|+|||++.. ..++.++|||||||++|||++|+.||......   .....+....
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~  239 (353)
T 2b9h_A          163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR---HQLLLIFGII  239 (353)
T ss_dssp             C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHH
T ss_pred             ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHHHHHh
Confidence            432211         1223578999999998765 67899999999999999999999999754321   1111222221


Q ss_pred             cCCccc---cccC-c-------cc--cCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          574 GNGKLL---EAVD-P-------RL--CRDFD-----GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       574 ~~~~l~---~~~d-~-------~l--~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      +.....   ..+. +       .+  .....     ......+.+++.+||+.||++|||++|+++|.++..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  311 (353)
T 2b9h_A          240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT  311 (353)
T ss_dssp             CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence            111000   0000 0       00  00000     011245678899999999999999999999999864

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=2.4e-39  Score=334.52  Aligned_cols=259  Identities=22%  Similarity=0.314  Sum_probs=210.6

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---------hhhHHHHHHHHHHHHhcC-CCCccEEEeeeee
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---------KQGIKEYASEVKIISRLR-HRNLVQLLGWCHE  420 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---------~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~  420 (645)
                      .++|...+.||+|+||.||+|.+..+++.||||.+....         ....+.+.+|++++.+++ ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            467888999999999999999999999999999986542         123467889999999996 9999999999999


Q ss_pred             CCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCc
Q 042831          421 KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA  500 (645)
Q Consensus       421 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla  500 (645)
                      .+..++||||+++++|.+++... ..+++..++.++.||+.||.|||+   .+++||||||+||+++.++.+||+|||++
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~  171 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS  171 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             CCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccch
Confidence            99999999999999999998653 568999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccccCCcceeecccCccccCccccc------cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc
Q 042831          501 RLVEHAKGSQTTVLAGTMGYMAPECAT------TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG  574 (645)
Q Consensus       501 ~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~  574 (645)
                      .......  ......|++.|+|||++.      ...++.++||||||++++||++|+.||.....   .....    ...
T Consensus       172 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~~----~~~  242 (298)
T 1phk_A          172 CQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ---MLMLR----MIM  242 (298)
T ss_dssp             EECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHH----HHH
T ss_pred             hhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH---HHHHH----HHh
Confidence            8654322  233457899999999885      45688999999999999999999999975332   11111    111


Q ss_pred             CCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          575 NGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       575 ~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      .+.... ..+. ..    .....+.+++.+||+.||++|||+.|++++.++...
T Consensus       243 ~~~~~~-~~~~-~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (298)
T 1phk_A          243 SGNYQF-GSPE-WD----DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY  290 (298)
T ss_dssp             HTCCCC-CTTT-GG----GSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             cCCccc-Cccc-cc----ccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhc
Confidence            111110 0011 01    123467788899999999999999999999998643

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=4.3e-39  Score=354.75  Aligned_cols=259  Identities=20%  Similarity=0.279  Sum_probs=210.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCC-CCccEEEeeeeeCCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH-RNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H-~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .++|...++||+|+||.||+|++..+++.||||++.....  ..++..|++++..++| +++..+..++...+..+||||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            4689999999999999999999999999999998765433  2357889999999987 566666677778889999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE---CCCCcEEEeeccCccccccc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML---DSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl---d~~~~~kl~DfGla~~~~~~  506 (645)
                      |+ +++|.+++......+++..++.|+.||+.||.|||+   .+|+||||||+|||+   +.++.+||+|||+++.....
T Consensus        84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~  159 (483)
T 3sv0_A           84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT  159 (483)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred             CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence            99 999999997767789999999999999999999999   899999999999999   68899999999999876543


Q ss_pred             CCc------ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc
Q 042831          507 KGS------QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE  580 (645)
Q Consensus       507 ~~~------~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~  580 (645)
                      ...      ......||..|+|||++.+..++.++|||||||+||||++|+.||..............+........+  
T Consensus       160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~--  237 (483)
T 3sv0_A          160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI--  237 (483)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH--
T ss_pred             ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH--
Confidence            321      223567999999999999999999999999999999999999999876554433333322221111111  


Q ss_pred             ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       581 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                         +.++..++    ..+.+++..||+.||++||++++|++.|+
T Consensus       238 ---~~l~~~~p----~~l~~li~~cl~~dP~~RPs~~el~~~L~  274 (483)
T 3sv0_A          238 ---EALCRGYP----TEFASYFHYCRSLRFDDKPDYSYLKRLFR  274 (483)
T ss_dssp             ---HHHHTTSC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred             ---HHHhcCCc----HHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence               11112222    46778889999999999999999999886

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.2e-39  Score=349.73  Aligned_cols=266  Identities=20%  Similarity=0.272  Sum_probs=202.4

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeee-------
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE-------  420 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~-------  420 (645)
                      ....++|...+.||+|+||.||+|++..+|+.||||++......    ..+|++++++++||||+++++++..       
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            45567899999999999999999999999999999998654322    2369999999999999999999843       


Q ss_pred             -------------------------------CCeEEEEEEecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHH
Q 042831          421 -------------------------------KKELLLVYEFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYL  466 (645)
Q Consensus       421 -------------------------------~~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yL  466 (645)
                                                     ....++||||++ |+|.+.+..   .+..+++..++.++.||++||.||
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                           334899999997 588777753   457899999999999999999999


Q ss_pred             HhhcCCCeeeccCCCCCeEEC-CCCcEEEeeccCcccccccCCcceeecccCccccCccccccC-CCCcchhHHHHHHHH
Q 042831          467 QEEWEQCVVHRDIKSSNIMLD-SNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVA  544 (645)
Q Consensus       467 H~~~~~~ivH~Dlkp~NILld-~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll  544 (645)
                      |+   .+|+||||||+|||++ .++.+||+|||+++......  ......+|+.|+|||.+.+. .++.++|||||||++
T Consensus       158 H~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  232 (383)
T 3eb0_A          158 HS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF  232 (383)
T ss_dssp             HT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             HH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence            98   8999999999999997 68899999999998654332  23345689999999988765 489999999999999


Q ss_pred             HHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC----------ccccccCccccC-----CCCHHHHHHHHHHHHHcCCCC
Q 042831          545 LEIACGRKPINPKAPQGQVSLLQWVWDLYGNG----------KLLEAVDPRLCR-----DFDGQQIERLMIVGLWCAHPD  609 (645)
Q Consensus       545 ~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~----------~l~~~~d~~l~~-----~~~~~~~~~l~~l~~~Cl~~d  609 (645)
                      |||++|+.||......+   ....+....+..          ...+..-+.+..     .++......+.+++.+||+.|
T Consensus       233 ~ell~g~~pf~~~~~~~---~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  309 (383)
T 3eb0_A          233 GELILGKPLFSGETSID---QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE  309 (383)
T ss_dssp             HHHHHSSCSSCCSSHHH---HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred             HHHHhCCCCCCCCChHH---HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCC
Confidence            99999999997644321   111111111111          000000011100     011112345788899999999


Q ss_pred             CCCCCCHHHHHHHhccC
Q 042831          610 ENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       610 P~~RPs~~evl~~L~~~  626 (645)
                      |++|||+.|+++|.+++
T Consensus       310 P~~R~t~~e~l~hp~f~  326 (383)
T 3eb0_A          310 PDLRINPYEAMAHPFFD  326 (383)
T ss_dssp             GGGSCCHHHHHTSGGGH
T ss_pred             hhhCCCHHHHhcCHHHH
Confidence            99999999999999974

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=8.3e-40  Score=337.94  Aligned_cols=258  Identities=27%  Similarity=0.410  Sum_probs=201.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeee----------
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE----------  420 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~----------  420 (645)
                      .++|...+.||+|+||.||+|++..+++.||||++... ....+.+.+|+.++.+++||||+++++++.+          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            45788899999999999999999988999999998643 3456788999999999999999999998865          


Q ss_pred             ---CCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeec
Q 042831          421 ---KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDF  497 (645)
Q Consensus       421 ---~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~Df  497 (645)
                         .+..++||||+++|+|.+++......+++..++.++.|++.||.|||+   .+++||||||+|||++.++.+||+||
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~df  160 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDF  160 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred             cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEeeC
Confidence               457899999999999999998777778999999999999999999999   89999999999999999999999999


Q ss_pred             cCcccccccC-------------CcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCch
Q 042831          498 GLARLVEHAK-------------GSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQV  563 (645)
Q Consensus       498 Gla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~  563 (645)
                      |+++......             ........|+..|+|||++.+. .++.++|||||||++|||++   ||....     
T Consensus       161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-----  232 (303)
T 1zy4_A          161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-----  232 (303)
T ss_dssp             CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-----
T ss_pred             cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-----
Confidence            9998654221             1122345689999999998764 68999999999999999998   553211     


Q ss_pred             hHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          564 SLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       564 ~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ...... .......      ..+...+.......+.+++.+||+.||++|||++|++++.|+..
T Consensus       233 ~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          233 ERVNIL-KKLRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             HHHHHH-HHHHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             hHHHHH-Hhccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence            111111 1111111      11112222333456778899999999999999999999999753

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.8e-39  Score=349.58  Aligned_cols=268  Identities=19%  Similarity=0.252  Sum_probs=189.1

Q ss_pred             CCC-CCccCcCCcEEEEEEEEc--CCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeee--eCCeEEEEE
Q 042831          354 FND-DQKLGQGGFGGVYKGFFR--ETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCH--EKKELLLVY  428 (645)
Q Consensus       354 f~~-~~~LG~G~fG~Vy~g~~~--~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~--~~~~~~lV~  428 (645)
                      |.. .++||+|+||.||+|++.  .+++.||||++.....  ...+.+|+.++.+++||||+++++++.  .....++||
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~   99 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF   99 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence            443 568999999999999976  4678999999865432  346789999999999999999999995  467899999


Q ss_pred             EecCCCChhhhhhhc--------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE----CCCCcEEEee
Q 042831          429 EFMPNGSLDSHLFKE--------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML----DSNFNAKIGD  496 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl----d~~~~~kl~D  496 (645)
                      ||++ ++|.+++...        ...+++..++.|+.||+.||.|||+   .+|+||||||+|||+    +.++.+||+|
T Consensus       100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~D  175 (405)
T 3rgf_A          100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIAD  175 (405)
T ss_dssp             ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred             eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence            9996 5787777421        1259999999999999999999999   899999999999999    7789999999


Q ss_pred             ccCcccccccCC--cceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCC------chhHHH
Q 042831          497 FGLARLVEHAKG--SQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQG------QVSLLQ  567 (645)
Q Consensus       497 fGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~------~~~l~~  567 (645)
                      ||+++.......  .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.......      ....+.
T Consensus       176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~  255 (405)
T 3rgf_A          176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD  255 (405)
T ss_dssp             TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHH
T ss_pred             CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHH
Confidence            999987653222  223446789999999998874 58999999999999999999999997544321      112222


Q ss_pred             HHHHHhcCCccccc--c-------------CccccCCCCHH---------HHHHHHHHHHHcCCCCCCCCCCHHHHHHHh
Q 042831          568 WVWDLYGNGKLLEA--V-------------DPRLCRDFDGQ---------QIERLMIVGLWCAHPDENLRPSIRQVIHVL  623 (645)
Q Consensus       568 ~~~~~~~~~~l~~~--~-------------d~~l~~~~~~~---------~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  623 (645)
                      .+....+...-..+  +             ...........         ....+.+|+.+||+.||++|||++|+++|.
T Consensus       256 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp  335 (405)
T 3rgf_A          256 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDP  335 (405)
T ss_dssp             HHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             HHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence            23322221110000  0             00000000000         023567889999999999999999999999


Q ss_pred             ccCC
Q 042831          624 NFEA  627 (645)
Q Consensus       624 ~~~~  627 (645)
                      |+..
T Consensus       336 ~f~~  339 (405)
T 3rgf_A          336 YFLE  339 (405)
T ss_dssp             GGTS
T ss_pred             hhcc
Confidence            9864

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=1.1e-39  Score=347.60  Aligned_cols=255  Identities=15%  Similarity=0.140  Sum_probs=205.6

Q ss_pred             ChHHHHHhhcCCCCCCccCcCCcEEEEEEE-----EcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC---CCCccEE
Q 042831          343 PYKELALATNDFNDDQKLGQGGFGGVYKGF-----FRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR---HRNLVQL  414 (645)
Q Consensus       343 ~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~-----~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~---H~nlv~l  414 (645)
                      +..++....++|...++||+|+||.||+|.     ...+++.||||++....   ..++..|++++.+++   |+|++++
T Consensus        56 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~  132 (365)
T 3e7e_A           56 PKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKF  132 (365)
T ss_dssp             SSCEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCE
T ss_pred             cceeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhh
Confidence            445566677889999999999999999994     56678999999997554   346777888888887   9999999


Q ss_pred             EeeeeeCCeEEEEEEecCCCChhhhhhh----cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC--
Q 042831          415 LGWCHEKKELLLVYEFMPNGSLDSHLFK----ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS--  488 (645)
Q Consensus       415 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~--  488 (645)
                      ++++...+..++|||||++|+|.+++..    ....+++..++.|+.||+.||.|||+   .+|+||||||+|||++.  
T Consensus       133 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~  209 (365)
T 3e7e_A          133 YSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGF  209 (365)
T ss_dssp             EEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGG
T ss_pred             heeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccc
Confidence            9999999999999999999999999974    35679999999999999999999998   89999999999999998  


Q ss_pred             ---------CCcEEEeeccCccccccc-CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCC
Q 042831          489 ---------NFNAKIGDFGLARLVEHA-KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKA  558 (645)
Q Consensus       489 ---------~~~~kl~DfGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~  558 (645)
                               ++.+||+|||+++..... .........||++|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       210 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~  289 (365)
T 3e7e_A          210 LEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNE  289 (365)
T ss_dssp             TCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEE
T ss_pred             cCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCC
Confidence                     899999999999765432 2234455779999999999999999999999999999999999999986432


Q ss_pred             CCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHhc
Q 042831          559 PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR-PSIRQVIHVLN  624 (645)
Q Consensus       559 ~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Ps~~evl~~L~  624 (645)
                      ...                  ..++..+......   +.+.+++..|++.+|.+| |+++++.+.|+
T Consensus       290 ~~~------------------~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~  335 (365)
T 3e7e_A          290 GGE------------------CKPEGLFRRLPHL---DMWNEFFHVMLNIPDCHHLPSLDLLRQKLK  335 (365)
T ss_dssp             TTE------------------EEECSCCTTCSSH---HHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred             CCc------------------eeechhccccCcH---HHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence            210                  0011222222222   344566778999999998 57777777665

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=9.7e-40  Score=343.53  Aligned_cols=266  Identities=24%  Similarity=0.355  Sum_probs=195.3

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHH--HHhcCCCCccEEEeeee-----eCCe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKI--ISRLRHRNLVQLLGWCH-----EKKE  423 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~--l~~l~H~nlv~l~~~~~-----~~~~  423 (645)
                      .++|...++||+|+||.||+|+.  +++.||||++.....   ..+..|.++  +..++||||+++++++.     ....
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   86 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME   86 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence            46788899999999999999977  478999999865432   344444444  44589999999998553     2346


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhc------CCCeeeccCCCCCeEECCCCcEEEeec
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW------EQCVVHRDIKSSNIMLDSNFNAKIGDF  497 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivH~Dlkp~NILld~~~~~kl~Df  497 (645)
                      +++||||+++|+|.+++...  ..++..++.++.||++||.|||+.+      ..+|+||||||+|||++.++.+||+||
T Consensus        87 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF  164 (336)
T 3g2f_A           87 YLLVMEYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF  164 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred             EEEEEecCCCCcHHHHHhhc--ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence            79999999999999999553  3589999999999999999999821      119999999999999999999999999


Q ss_pred             cCcccccccCC-------cceeecccCccccCcccccc-------CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc-
Q 042831          498 GLARLVEHAKG-------SQTTVLAGTMGYMAPECATT-------GKASKESDVYSFGIVALEIACGRKPINPKAPQGQ-  562 (645)
Q Consensus       498 Gla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~-  562 (645)
                      |+++.......       .......||+.|+|||++.+       ..++.++|||||||++|||++|+.||........ 
T Consensus       165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~  244 (336)
T 3g2f_A          165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY  244 (336)
T ss_dssp             TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred             cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence            99986643221       12234579999999999876       3567789999999999999999877654332111 


Q ss_pred             hhHH----------HHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          563 VSLL----------QWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       563 ~~l~----------~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....          ...............+.+...  ........+.+++.+||+.||++|||++|+++.|+.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~  315 (336)
T 3g2f_A          245 QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK--ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE  315 (336)
T ss_dssp             CCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC--CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             HHhhhcccCCCchHHHHHhhhcccccCCCCCcccc--cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence            0000          111111111111111111111  122355678899999999999999999999999874

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.1e-39  Score=341.76  Aligned_cols=267  Identities=24%  Similarity=0.383  Sum_probs=206.8

Q ss_pred             CccChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeee
Q 042831          340 KRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWC  418 (645)
Q Consensus       340 ~~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~  418 (645)
                      ..+.+.++....++|...+.||+|+||.||+|++..+++.||||++.... ...+.+.+|+.++.++ +||||+++++++
T Consensus        12 ~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   90 (326)
T 2x7f_A           12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAF   90 (326)
T ss_dssp             ----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred             hhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence            34555666677889999999999999999999999889999999986543 3346788999999999 799999999999


Q ss_pred             ee------CCeEEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc
Q 042831          419 HE------KKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN  491 (645)
Q Consensus       419 ~~------~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~  491 (645)
                      ..      .+..++||||+++++|.+++... ...+++..++.++.||+.||.|||+   .+++||||||+|||++.++.
T Consensus        91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~  167 (326)
T 2x7f_A           91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAE  167 (326)
T ss_dssp             EECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCC
T ss_pred             eeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCC
Confidence            76      46889999999999999999754 3578999999999999999999999   89999999999999999999


Q ss_pred             EEEeeccCcccccccCCcceeecccCccccCccccc-----cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHH
Q 042831          492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT-----TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL  566 (645)
Q Consensus       492 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~  566 (645)
                      +||+|||++....... .......|++.|+|||++.     ...++.++|||||||++|||++|+.||......   .. 
T Consensus       168 ~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~-  242 (326)
T 2x7f_A          168 VKLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM---RA-  242 (326)
T ss_dssp             EEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH---HH-
T ss_pred             EEEeeCcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH---HH-
Confidence            9999999997654322 1223456899999999986     566899999999999999999999999653321   11 


Q ss_pred             HHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          567 QWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       567 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                        ...... .......    ...+    ...+..++.+||+.||++||+++|++++.++.
T Consensus       243 --~~~~~~-~~~~~~~----~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~  291 (326)
T 2x7f_A          243 --LFLIPR-NPAPRLK----SKKW----SKKFQSFIESCLVKNHSQRPATEQLMKHPFIR  291 (326)
T ss_dssp             --HHHHHH-SCCCCCS----CSCS----CHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHH
T ss_pred             --HHHhhc-CccccCC----cccc----CHHHHHHHHHHhccChhhCCCHHHHhhChHHh
Confidence              111111 1111111    1112    24567888999999999999999999998875

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.6e-39  Score=337.13  Aligned_cols=267  Identities=21%  Similarity=0.273  Sum_probs=201.3

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeee-----------
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCH-----------  419 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~-----------  419 (645)
                      .++|...+.||+|+||.||+|.+..+++.||+|++........+++.+|++++.+++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            467888999999999999999999999999999998777777889999999999999999999999873           


Q ss_pred             ---eCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC-CCCcEEEe
Q 042831          420 ---EKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD-SNFNAKIG  495 (645)
Q Consensus       420 ---~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld-~~~~~kl~  495 (645)
                         +.+..++||||++ |+|.+++.+  ..+++..++.++.|++.||.|||+   .+|+||||||+|||++ +++.+||+
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~  163 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIG  163 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred             cccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEc
Confidence               4468899999997 699998843  568999999999999999999999   8999999999999997 57799999


Q ss_pred             eccCcccccccCC--cceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHH
Q 042831          496 DFGLARLVEHAKG--SQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDL  572 (645)
Q Consensus       496 DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~  572 (645)
                      |||+++.......  .......++..|+|||.+.. ..++.++|||||||++|||++|+.||......   .....+...
T Consensus       164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---~~~~~~~~~  240 (320)
T 2i6l_A          164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL---EQMQLILES  240 (320)
T ss_dssp             CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHH
T ss_pred             cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHh
Confidence            9999986643211  12233567899999998865 67899999999999999999999999754421   111111111


Q ss_pred             hcC----------CccccccCcccc-CCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          573 YGN----------GKLLEAVDPRLC-RDFD-----GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       573 ~~~----------~~l~~~~d~~l~-~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ...          ..+...+..... ....     ......+.+++.+||+.||++|||++|++++.++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  310 (320)
T 2i6l_A          241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMS  310 (320)
T ss_dssp             SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHH
T ss_pred             cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccc
Confidence            000          000000000000 0000     01134677889999999999999999999999876

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1e-39  Score=348.37  Aligned_cols=265  Identities=23%  Similarity=0.313  Sum_probs=192.5

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC------
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK------  421 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~------  421 (645)
                      ..++|...+.||+|+||.||+|.+..+|+.||||++...  .....+.+.+|++++++++||||+++++++...      
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence            347889999999999999999999999999999998653  344567888999999999999999999998654      


Q ss_pred             CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          422 KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      ...++|+||+ +++|.+++..  ..+++..+..++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       107 ~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~  180 (367)
T 2fst_X          107 NDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR  180 (367)
T ss_dssp             CCCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred             CeEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence            5689999999 7899988854  569999999999999999999998   899999999999999999999999999998


Q ss_pred             cccccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcc--
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL--  578 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l--  578 (645)
                      ....    ......||+.|+|||++.+ ..++.++|||||||+++||++|+.||......   .....+....+....  
T Consensus       181 ~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~l~~i~~~~g~p~~~~  253 (367)
T 2fst_X          181 HTAD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI---DQLKLILRLVGTPGAEL  253 (367)
T ss_dssp             --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCSCCHHH
T ss_pred             cccc----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCCHHH
Confidence            6432    2334578999999999877 67899999999999999999999999754422   222222222211100  


Q ss_pred             ccccCc--------cc--cCCCCHH-----HHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          579 LEAVDP--------RL--CRDFDGQ-----QIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       579 ~~~~d~--------~l--~~~~~~~-----~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ...+..        .+  .......     ....+.+|+.+||+.||++|||++|+++|.++..
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~  317 (367)
T 2fst_X          254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ  317 (367)
T ss_dssp             HTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhh
Confidence            000000        00  0001111     1245778899999999999999999999999863

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=2.9e-39  Score=358.60  Aligned_cols=257  Identities=25%  Similarity=0.350  Sum_probs=205.1

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ..++|...++||+|+||.||+|++..++..||+|++....  ......+.+|+.++++++||||++++++|.+.+..++|
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  114 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV  114 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            3456888999999999999999999999999999987542  33457889999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC---CcEEEeeccCccccc
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN---FNAKIGDFGLARLVE  504 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~---~~~kl~DfGla~~~~  504 (645)
                      ||||++|+|.+++... ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.+   +.+||+|||+++...
T Consensus       115 ~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~  190 (494)
T 3lij_A          115 MECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE  190 (494)
T ss_dssp             EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred             EecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence            9999999999988654 468999999999999999999999   899999999999999764   459999999998765


Q ss_pred             ccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          505 HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       505 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      ..  .......||+.|+|||++. +.++.++|||||||++|||++|+.||......   .+..    ....+...  .+.
T Consensus       191 ~~--~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~----~i~~~~~~--~~~  258 (494)
T 3lij_A          191 NQ--KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ---EILR----KVEKGKYT--FDS  258 (494)
T ss_dssp             TT--BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHTCCC--CCS
T ss_pred             CC--ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----HHHhCCCC--CCc
Confidence            33  2334467999999999876 56999999999999999999999999754321   1221    11122111  111


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ......    ...+.+++.+||+.||++|||+.|+++|.|..
T Consensus       259 ~~~~~~----s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~  296 (494)
T 3lij_A          259 PEWKNV----SEGAKDLIKQMLQFDSQRRISAQQALEHPWIK  296 (494)
T ss_dssp             GGGTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred             hhcccC----CHHHHHHHHHHCCCChhhCccHHHHhcCcccc
Confidence            111112    24567888999999999999999999998863

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1.4e-39  Score=370.67  Aligned_cols=246  Identities=27%  Similarity=0.413  Sum_probs=197.4

Q ss_pred             CccCcCCcEEEEEEEEc--CCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFR--ETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~--~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      ++||+|+||.||+|.+.  .+++.||||+++...  ....+++.+|++++.+++||||++++++|.. +..++|||||++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            47999999999999654  557899999997543  3446789999999999999999999999964 568899999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC--cce
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG--SQT  511 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~--~~~  511 (645)
                      |+|.+++.. ...+++..++.|+.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.......  ...
T Consensus       454 g~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~  529 (635)
T 4fl3_A          454 GPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ  529 (635)
T ss_dssp             EEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred             CCHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence            999999954 4578999999999999999999999   8999999999999999999999999999987654322  122


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      ....+|+.|+|||++....++.++|||||||++|||++ |+.||......       .+......+....     .... 
T Consensus       530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-------~~~~~i~~~~~~~-----~p~~-  596 (635)
T 4fl3_A          530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-------EVTAMLEKGERMG-----CPAG-  596 (635)
T ss_dssp             -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHHHTTCCCC-----CCTT-
T ss_pred             cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCCCC-----CCCC-
Confidence            33456789999999999999999999999999999998 99999754321       1222222332111     1111 


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                         ....+.+++..||+.||++||++++|++.|+
T Consensus       597 ---~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~  627 (635)
T 4fl3_A          597 ---CPREMYDLMNLCWTYDVENRPGFAAVELRLR  627 (635)
T ss_dssp             ---CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             ---CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence               2346778889999999999999999999986

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=6e-39  Score=356.93  Aligned_cols=258  Identities=25%  Similarity=0.359  Sum_probs=208.2

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-------------hhHHHHHHHHHHHHhcCCCCccEEEe
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-------------QGIKEYASEVKIISRLRHRNLVQLLG  416 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-------------~~~~~~~~Ei~~l~~l~H~nlv~l~~  416 (645)
                      ..++|...++||+|+||.||+|.+..+++.||+|++.....             ...+.+.+|+.++.+++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            45789999999999999999999999999999999865321             33567899999999999999999999


Q ss_pred             eeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC---cEE
Q 042831          417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF---NAK  493 (645)
Q Consensus       417 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~---~~k  493 (645)
                      ++.+.+..++|||||++|+|.+++... ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++   .+|
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~k  189 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIK  189 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSEE
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccEE
Confidence            999999999999999999999988654 468999999999999999999999   8999999999999998775   699


Q ss_pred             EeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHh
Q 042831          494 IGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY  573 (645)
Q Consensus       494 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~  573 (645)
                      |+|||+++.....  .......||+.|+|||++. +.++.++|||||||++|||++|+.||......   .+..    ..
T Consensus       190 l~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~----~i  259 (504)
T 3q5i_A          190 IVDFGLSSFFSKD--YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ---DIIK----KV  259 (504)
T ss_dssp             ECCCTTCEECCTT--SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HH
T ss_pred             EEECCCCEEcCCC--CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----HH
Confidence            9999999876433  2334457999999999886 56899999999999999999999999754321   1221    11


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ..+....  +.......    ...+.+++.+||+.||++|||++|+++|.|...
T Consensus       260 ~~~~~~~--~~~~~~~~----s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~  307 (504)
T 3q5i_A          260 EKGKYYF--DFNDWKNI----SDEAKELIKLMLTYDYNKRCTAEEALNSRWIKK  307 (504)
T ss_dssp             HHCCCCC--CHHHHTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             HcCCCCC--CccccCCC----CHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhh
Confidence            1222110  00000111    245778889999999999999999999998753

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=1.3e-39  Score=345.90  Aligned_cols=272  Identities=21%  Similarity=0.243  Sum_probs=198.2

Q ss_pred             HHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe-
Q 042831          345 KELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE-  423 (645)
Q Consensus       345 ~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~-  423 (645)
                      .+.....++|...+.||+|+||.||+|++..+++.||||++.... .....+.+|++.+..++||||+++++++...+. 
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            455667789999999999999999999999999999999986543 233456778888999999999999999865433 


Q ss_pred             ------EEEEEEecCCCChhhhhh---hcCCCCCHHHHHHHHHHHHHHHHHHH--hhcCCCeeeccCCCCCeEECC-CCc
Q 042831          424 ------LLLVYEFMPNGSLDSHLF---KENSLLTWEFRYKIAQDLASGLLYLQ--EEWEQCVVHRDIKSSNIMLDS-NFN  491 (645)
Q Consensus       424 ------~~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivH~Dlkp~NILld~-~~~  491 (645)
                            .++||||+++ +|...+.   .....+++..+..++.|++.||.|||  +   .+|+||||||+|||++. ++.
T Consensus        95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~  170 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGT  170 (360)
T ss_dssp             CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTE
T ss_pred             cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCc
Confidence                  7899999976 5544443   34567899999999999999999999  6   89999999999999996 899


Q ss_pred             EEEeeccCcccccccCCcceeecccCccccCccccccCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHH
Q 042831          492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVW  570 (645)
Q Consensus       492 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~  570 (645)
                      +||+|||+++......  ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.......   ....+.
T Consensus       171 ~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~---~~~~~~  245 (360)
T 3e3p_A          171 LKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG---QLHEIV  245 (360)
T ss_dssp             EEECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHH
T ss_pred             EEEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH---HHHHHH
Confidence            9999999998665322  233457899999999986654 8999999999999999999999997644221   121111


Q ss_pred             HHhcCC--ccccccCcc----------------ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          571 DLYGNG--KLLEAVDPR----------------LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       571 ~~~~~~--~l~~~~d~~----------------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ......  .....+++.                ............+.+++.+||+.||++|||+.|+++|.|+.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~  319 (360)
T 3e3p_A          246 RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFD  319 (360)
T ss_dssp             HHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGG
T ss_pred             HHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcccc
Confidence            111100  000000000                00111112346788899999999999999999999999986

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=2.9e-39  Score=339.32  Aligned_cols=267  Identities=21%  Similarity=0.299  Sum_probs=209.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEE-cCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCC------CccEEEeeeeeCCe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFF-RETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHR------NLVQLLGWCHEKKE  423 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~-~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~------nlv~l~~~~~~~~~  423 (645)
                      .++|...+.||+|+||.||+|.+ ..+++.||||++... ....+.+.+|++++.+++|+      +++++++++...+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            46788999999999999999998 557899999998644 34557788999999998765      49999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC--------------
Q 042831          424 LLLVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS--------------  488 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~--------------  488 (645)
                      .++||||+ +++|.+++.... ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.              
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~  167 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRD  167 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred             EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCccccc
Confidence            99999999 899999987654 468999999999999999999999   89999999999999987              


Q ss_pred             -----CCcEEEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCch
Q 042831          489 -----NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQV  563 (645)
Q Consensus       489 -----~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~  563 (645)
                           ++.+||+|||+++....    ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+..
T Consensus       168 ~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~  243 (339)
T 1z57_A          168 ERTLINPDIKVVDFGSATYDDE----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL  243 (339)
T ss_dssp             EEEESCCCEEECCCSSCEETTS----CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH
T ss_pred             cccccCCCceEeeCcccccCcc----ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence                 67899999999976432    223457899999999999999999999999999999999999999754432211


Q ss_pred             hHHHHH--------HHHhcCCccc------------------cccCccc-cCCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 042831          564 SLLQWV--------WDLYGNGKLL------------------EAVDPRL-CRDFDGQQIERLMIVGLWCAHPDENLRPSI  616 (645)
Q Consensus       564 ~l~~~~--------~~~~~~~~l~------------------~~~d~~l-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  616 (645)
                      ..+...        +.........                  ....+.. .........+.+.+++.+||+.||++|||+
T Consensus       244 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~  323 (339)
T 1z57_A          244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL  323 (339)
T ss_dssp             HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH
Confidence            111110        0000000000                  0000000 001123456778899999999999999999


Q ss_pred             HHHHHHhccC
Q 042831          617 RQVIHVLNFE  626 (645)
Q Consensus       617 ~evl~~L~~~  626 (645)
                      +|++++.++.
T Consensus       324 ~ell~hp~f~  333 (339)
T 1z57_A          324 REALKHPFFD  333 (339)
T ss_dssp             HHHTTSGGGG
T ss_pred             HHHhcCHHHH
Confidence            9999998875

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=5.4e-40  Score=336.17  Aligned_cols=249  Identities=30%  Similarity=0.435  Sum_probs=196.9

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC-CeEEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK-KELLLVY  428 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~-~~~~lV~  428 (645)
                      ..++|...+.||+|+||.||++.+.  |+.||||.+....  ..+.+.+|++++.+++||||+++++++.+. +..++||
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~   94 (278)
T 1byg_A           19 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   94 (278)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             ChhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence            3467888999999999999999875  7899999986543  456789999999999999999999997654 5789999


Q ss_pred             EecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          429 EFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      ||+++++|.+++.... ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++..... 
T Consensus        95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-  170 (278)
T 1byg_A           95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-  170 (278)
T ss_dssp             CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred             ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeecccccccccc-
Confidence            9999999999997543 348999999999999999999999   89999999999999999999999999998754332 


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                         .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......   .+..    ....+.     .+..
T Consensus       171 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~~~----~~~~~~-----~~~~  235 (278)
T 1byg_A          171 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVP----RVEKGY-----KMDA  235 (278)
T ss_dssp             --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---GHHH----HHTTTC-----CCCC
T ss_pred             ---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHhcCC-----CCCC
Confidence               122357889999999999999999999999999999998 99999754322   1111    111221     1111


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ...+    ...+.+++..||+.||++|||++|+++.|+.
T Consensus       236 ~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  270 (278)
T 1byg_A          236 PDGC----PPAVYEVMKNCWHLDAAMRPSFLQLREQLEH  270 (278)
T ss_dssp             CTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cccC----CHHHHHHHHHHhcCChhhCCCHHHHHHHHHH
Confidence            1222    3467788899999999999999999999864

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=2e-39  Score=359.20  Aligned_cols=257  Identities=25%  Similarity=0.356  Sum_probs=208.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      .++|...++||+|+||.||+|++..+++.||||++...  .......+.+|++++.+++||||+++++++.+.+..++||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            45788899999999999999999999999999998643  2334678899999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC---CCCcEEEeeccCcccccc
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD---SNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld---~~~~~kl~DfGla~~~~~  505 (645)
                      ||+++|+|.+.+... ..+++..+..++.||+.||.|||+   .+|+||||||+|||++   .++.+||+|||+++....
T Consensus       101 e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  176 (486)
T 3mwu_A          101 ELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ  176 (486)
T ss_dssp             CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred             EcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence            999999999988654 468999999999999999999999   8999999999999995   456799999999986543


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      .  .......||+.|+|||++.+ .++.++|||||||++|||++|+.||......   .+...    ...+...... +.
T Consensus       177 ~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~----i~~~~~~~~~-~~  245 (486)
T 3mwu_A          177 N--TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY---DILKR----VETGKYAFDL-PQ  245 (486)
T ss_dssp             C------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH----HHHTCCCSCS-GG
T ss_pred             C--CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHH----HHhCCCCCCC-cc
Confidence            2  23344579999999999875 6999999999999999999999999754321   12211    1122211100 11


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      . ..    ....+.+++.+||+.||++|||+.|+++|.|+..
T Consensus       246 ~-~~----~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~  282 (486)
T 3mwu_A          246 W-RT----ISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK  282 (486)
T ss_dssp             G-GG----SCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHH
T ss_pred             c-CC----CCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhcc
Confidence            0 11    1245678889999999999999999999998753

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.3e-39  Score=345.35  Aligned_cols=259  Identities=17%  Similarity=0.145  Sum_probs=204.0

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcC--------CCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccE---------
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRE--------TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQ---------  413 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~--------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~---------  413 (645)
                      .++|...+.||+|+||.||+|++..        .++.||+|.+...     +.+.+|++++.+++|||+++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            4689999999999999999999987        3789999998654     35788999999999999887         


Q ss_pred             ------EEeeeee-CCeEEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeE
Q 042831          414 ------LLGWCHE-KKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIM  485 (645)
Q Consensus       414 ------l~~~~~~-~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NIL  485 (645)
                            +++++.. ++..++||||+ +++|.+++... ...+++..++.++.||+.||.|||+   ++|+||||||+|||
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl  191 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIF  191 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEE
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEE
Confidence                  6677765 67899999999 99999999764 4679999999999999999999999   89999999999999


Q ss_pred             ECCCC--cEEEeeccCcccccccCCc------ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Q 042831          486 LDSNF--NAKIGDFGLARLVEHAKGS------QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPK  557 (645)
Q Consensus       486 ld~~~--~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~  557 (645)
                      ++.++  .+||+|||+++........      ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  271 (352)
T 2jii_A          192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC  271 (352)
T ss_dssp             EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence            99998  8999999999866533211      123357999999999999999999999999999999999999999865


Q ss_pred             CCCCchhHHHHHHHHhcCCccccccCcccc-CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          558 APQGQVSLLQWVWDLYGNGKLLEAVDPRLC-RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       558 ~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .... ..+..........  .....++... ..+    ...+.+++.+||+.||++|||++++++.|+.
T Consensus       272 ~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  333 (352)
T 2jii_A          272 LPNT-EDIMKQKQKFVDK--PGPFVGPCGHWIRP----SETLQKYLKVVMALTYEEKPPYAMLRNNLEA  333 (352)
T ss_dssp             TTCH-HHHHHHHHHHHHS--CCCEECTTSCEECC----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             CcCH-HHHHHHHHhccCC--hhhhhhhccccCCC----cHHHHHHHHHHHhCChhhCCCHHHHHHHHHH
Confidence            4221 1222222111111  1111111110 111    2467778899999999999999999999974

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.9e-39  Score=339.63  Aligned_cols=256  Identities=23%  Similarity=0.353  Sum_probs=202.3

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--------hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--------KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK  422 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--------~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~  422 (645)
                      .++|...+.||+|+||.||+|++..+++.||||.+....        ......+.+|++++.+++||||+++++++..++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            457888999999999999999999999999999986432        122345889999999999999999999987655


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc---EEEeeccC
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN---AKIGDFGL  499 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~---~kl~DfGl  499 (645)
                       .++||||+++++|.+++.. ...+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.   +||+|||+
T Consensus        89 -~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~  163 (322)
T 2ycf_A           89 -YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGH  163 (322)
T ss_dssp             -EEEEEECCTTEETHHHHST-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred             -eEEEEecCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence             8999999999999998854 4578999999999999999999998   89999999999999987664   99999999


Q ss_pred             cccccccCCcceeecccCccccCccccc---cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC
Q 042831          500 ARLVEHAKGSQTTVLAGTMGYMAPECAT---TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG  576 (645)
Q Consensus       500 a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~  576 (645)
                      ++.....  .......||+.|+|||++.   ...++.++|||||||++|||++|+.||........  +...+    ..+
T Consensus       164 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~----~~~  235 (322)
T 2ycf_A          164 SKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQI----TSG  235 (322)
T ss_dssp             CEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHHHH----HHT
T ss_pred             ceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHHHH----HhC
Confidence            9865422  2223456899999999874   56789999999999999999999999975443321  12211    111


Q ss_pred             ccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       577 ~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ...  ..+......    ...+.+++.+||+.||++||++.|++++.++
T Consensus       236 ~~~--~~~~~~~~~----~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~  278 (322)
T 2ycf_A          236 KYN--FIPEVWAEV----SEKALDLVKKLLVVDPKARFTTEEALRHPWL  278 (322)
T ss_dssp             CCC--CCHHHHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred             ccc--cCchhhhhc----CHHHHHHHHHHcccCHhhCCCHHHHhhCcCc
Confidence            110  011111112    2467788899999999999999999998875

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1.4e-38  Score=339.40  Aligned_cols=269  Identities=20%  Similarity=0.276  Sum_probs=208.9

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-----------CCCccEEEeeee
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-----------HRNLVQLLGWCH  419 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----------H~nlv~l~~~~~  419 (645)
                      .++|...+.||+|+||.||+|++..+++.||||++... ....+.+.+|+.++.+++           |+||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            46788999999999999999999999999999998643 344567889999999886           899999999987


Q ss_pred             eCC----eEEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCC-CeeeccCCCCCeEEC------
Q 042831          420 EKK----ELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQ-CVVHRDIKSSNIMLD------  487 (645)
Q Consensus       420 ~~~----~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivH~Dlkp~NILld------  487 (645)
                      ..+    ..++||||+ +++|.+++... ...+++..+..++.||+.||.|||+   + +|+||||||+|||++      
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~~  172 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPE  172 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTT
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCCc
Confidence            654    789999999 99999998763 4569999999999999999999998   7 999999999999994      


Q ss_pred             CCCcEEEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc---hh
Q 042831          488 SNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ---VS  564 (645)
Q Consensus       488 ~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~---~~  564 (645)
                      ..+.+||+|||+++.....    .....||+.|+|||++.+..++.++|||||||++|||++|+.||........   ..
T Consensus       173 ~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~  248 (373)
T 1q8y_A          173 NLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD  248 (373)
T ss_dssp             TEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred             CcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence            4558999999999865432    2334789999999999999999999999999999999999999986543211   11


Q ss_pred             HHHHHHHHhcC--------C----------ccccccCc-c---------ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 042831          565 LLQWVWDLYGN--------G----------KLLEAVDP-R---------LCRDFDGQQIERLMIVGLWCAHPDENLRPSI  616 (645)
Q Consensus       565 l~~~~~~~~~~--------~----------~l~~~~d~-~---------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  616 (645)
                      ....+.+..+.        +          .....+.. .         -...++......+.+++.+||+.||++|||+
T Consensus       249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  328 (373)
T 1q8y_A          249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA  328 (373)
T ss_dssp             HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred             HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence            11111111110        0          00000000 0         0113456677889999999999999999999


Q ss_pred             HHHHHHhccCCC
Q 042831          617 RQVIHVLNFEAP  628 (645)
Q Consensus       617 ~evl~~L~~~~~  628 (645)
                      +|+++|.++...
T Consensus       329 ~ell~hp~f~~~  340 (373)
T 1q8y_A          329 GGLVNHPWLKDT  340 (373)
T ss_dssp             HHHHTCGGGTTC
T ss_pred             HHHhhChhhhcc
Confidence            999999998753

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=1e-39  Score=361.39  Aligned_cols=257  Identities=25%  Similarity=0.348  Sum_probs=210.8

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ..++|...++||+|+||.||+|++..+++.||||++....   ....+.+.+|+.++.+++||||+++++++.+.+..++
T Consensus        24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            3457888999999999999999999999999999986542   3456789999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE---CCCCcEEEeeccCcccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML---DSNFNAKIGDFGLARLV  503 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl---d~~~~~kl~DfGla~~~  503 (645)
                      ||||+.+|+|.+++... ..+++..+..++.||+.||.|||+   .+|+||||||+|||+   +.++.+||+|||+++..
T Consensus       104 v~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  179 (484)
T 3nyv_A          104 VGEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF  179 (484)
T ss_dssp             EECCCCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred             EEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence            99999999999988644 568999999999999999999999   899999999999999   56789999999999866


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ....  ......||+.|+|||++.+ .++.++|||||||++|||++|+.||.....   ..+...    ...+...... 
T Consensus       180 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~----i~~~~~~~~~-  248 (484)
T 3nyv_A          180 EASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE---YDILKK----VEKGKYTFEL-  248 (484)
T ss_dssp             CCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHH----HHHCCCCCCS-
T ss_pred             cccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH---HHHHHH----HHcCCCCCCC-
Confidence            4332  2334579999999998865 699999999999999999999999975432   122221    1222211110 


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      +.. ..    ....+.+++.+||+.||++|||++|+++|.|+.
T Consensus       249 ~~~-~~----~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~  286 (484)
T 3nyv_A          249 PQW-KK----VSESAKDLIRKMLTYVPSMRISARDALDHEWIQ  286 (484)
T ss_dssp             GGG-GG----SCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHH
T ss_pred             ccc-cc----CCHHHHHHHHHHCCCChhHCcCHHHHhhChhhc
Confidence            110 11    224567888999999999999999999999875

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=7.5e-39  Score=335.15  Aligned_cols=270  Identities=25%  Similarity=0.303  Sum_probs=207.2

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEc-CCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhc---CCCCccEEEeeee---
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFR-ETNSYIAVKRVSQGS--KQGIKEYASEVKIISRL---RHRNLVQLLGWCH---  419 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l---~H~nlv~l~~~~~---  419 (645)
                      .+.++|...+.||+|+||.||+|.+. .+++.||+|++....  ......+.+|+.++.++   +||||++++++|.   
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            45678999999999999999999995 678999999986432  22233566777777666   8999999999987   


Q ss_pred             --eCCeEEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEee
Q 042831          420 --EKKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD  496 (645)
Q Consensus       420 --~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~D  496 (645)
                        .....++||||++ |+|.+++... ...+++..+..++.||+.||.|||+   .+|+||||||+||+++.++.+||+|
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~D  163 (326)
T 1blx_A           88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLAD  163 (326)
T ss_dssp             CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECS
T ss_pred             cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEec
Confidence              5567899999997 6999998764 3459999999999999999999999   8999999999999999999999999


Q ss_pred             ccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC
Q 042831          497 FGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG  576 (645)
Q Consensus       497 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~  576 (645)
                      ||+++......  ......|+..|+|||++.+..++.++|||||||++|||++|+.||.....   ......+....+..
T Consensus       164 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~~i~~~~~~~  238 (326)
T 1blx_A          164 FGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD---VDQLGKILDVIGLP  238 (326)
T ss_dssp             CCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCCC
T ss_pred             CcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHHHHcCCC
Confidence            99998654322  23345789999999999999999999999999999999999999975432   22222222222111


Q ss_pred             ccccc----------cCc---cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          577 KLLEA----------VDP---RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       577 ~l~~~----------~d~---~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      .....          ...   .....+.......+.+++.+||+.||++|||++|+++|.++..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  302 (326)
T 1blx_A          239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD  302 (326)
T ss_dssp             CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred             CcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccc
Confidence            00000          000   0000011112345678889999999999999999999998753

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=1e-39  Score=335.85  Aligned_cols=257  Identities=26%  Similarity=0.373  Sum_probs=198.8

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcC-CC--eEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRE-TN--SYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~-~~--~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~  424 (645)
                      .++|...+.||+|+||.||+|++.. ++  ..||+|+++..   .....+.+.+|++++.+++||||+++++++.... .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            4578889999999999999998643 23  36999988654   3345678999999999999999999999998765 8


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE  504 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~  504 (645)
                      ++|+||+++++|.+++......+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++...
T Consensus        96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  172 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALP  172 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred             eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence            89999999999999998766779999999999999999999999   899999999999999999999999999998764


Q ss_pred             ccCCc--ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccc
Q 042831          505 HAKGS--QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA  581 (645)
Q Consensus       505 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~  581 (645)
                      .....  ......++..|+|||++.+..++.++||||||+++|||++ |+.||......   .+.   ......+..   
T Consensus       173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~---~~~~~~~~~---  243 (291)
T 1u46_A          173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS---QIL---HKIDKEGER---  243 (291)
T ss_dssp             C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHH---HHHHTSCCC---
T ss_pred             ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH---HHH---HHHHccCCC---
Confidence            43322  1233457888999999988889999999999999999999 99999754321   111   111111111   


Q ss_pred             cCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       582 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                        ......    ....+.+++.+||+.||++|||+.+++++|+..
T Consensus       244 --~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  282 (291)
T 1u46_A          244 --LPRPED----CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  282 (291)
T ss_dssp             --CCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCCCcC----cCHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence              111111    234677888999999999999999999999864

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.6e-39  Score=353.18  Aligned_cols=262  Identities=22%  Similarity=0.289  Sum_probs=199.2

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC------CeEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK------KELL  425 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~------~~~~  425 (645)
                      .+|...+.||+|+||.||+|++..+|+.||||++.....    ...+|++++++++||||++++++|...      ..++
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            357788999999999999999999999999999865432    234699999999999999999998532      2467


Q ss_pred             EEEEecCCCChhhhhh---hcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC-CcEEEeeccCcc
Q 042831          426 LVYEFMPNGSLDSHLF---KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN-FNAKIGDFGLAR  501 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~-~~~kl~DfGla~  501 (645)
                      +||||+++ +|.+.+.   .....+++..++.++.||++||.|||+   .+|+||||||+|||++.+ +.+||+|||+++
T Consensus       130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            99999975 5655553   345679999999999999999999998   899999999999999955 678999999998


Q ss_pred             cccccCCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC-----
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN-----  575 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~-----  575 (645)
                      ......  ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+   .+..+....+.     
T Consensus       206 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~---~l~~i~~~lg~p~~~~  280 (420)
T 1j1b_A          206 QLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD---QLVEIIKVLGTPTREQ  280 (420)
T ss_dssp             ECCTTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCSCCHHH
T ss_pred             hcccCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHH
Confidence            654322  22345789999999998765 68999999999999999999999997643221   11111111111     


Q ss_pred             -----CccccccCccccCC-----CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          576 -----GKLLEAVDPRLCRD-----FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       576 -----~~l~~~~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                           ....+..-+.+...     +.......+.+|+.+||+.||++|||+.|+++|.+++
T Consensus       281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~  341 (420)
T 1j1b_A          281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD  341 (420)
T ss_dssp             HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGG
T ss_pred             HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhc
Confidence                 11111111111100     1111235678899999999999999999999999975

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=6.2e-39  Score=342.85  Aligned_cols=262  Identities=23%  Similarity=0.303  Sum_probs=202.9

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE----
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL----  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~----  424 (645)
                      .++|...+.||+|+||.||+|.+..+|+.||||++...  .....+.+.+|+.++.+++||||+++++++...+..    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            46888899999999999999999999999999999754  344567889999999999999999999999876654    


Q ss_pred             --EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          425 --LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       425 --~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                        ++||||+. ++|.+.+.   ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus       121 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~  193 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARH  193 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred             eEEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence              99999996 68877763   348999999999999999999999   8999999999999999999999999999975


Q ss_pred             ccccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCc--cc
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK--LL  579 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~--l~  579 (645)
                      ...    ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......   .....+....+...  ..
T Consensus       194 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~  266 (371)
T 4exu_A          194 ADA----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL---DQLTQILKVTGVPGTEFV  266 (371)
T ss_dssp             ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCHHHH
T ss_pred             ccc----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCCCcHHHH
Confidence            432    2334578999999999877 67999999999999999999999999754321   11111111111000  00


Q ss_pred             c------------ccCccccCCC---CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          580 E------------AVDPRLCRDF---DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       580 ~------------~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .            .+.......+   .......+.+++.+||+.||++|||++|++++.++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~  328 (371)
T 4exu_A          267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE  328 (371)
T ss_dssp             TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGT
T ss_pred             HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccc
Confidence            0            0000000000   001135678889999999999999999999999986

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=4.1e-39  Score=337.72  Aligned_cols=259  Identities=25%  Similarity=0.357  Sum_probs=185.1

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHH-HHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVK-IISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~-~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ..++|...+.||+|+||.||+|.+..+|+.||||++.... .....++..|+. +++.++||||+++++++...+..++|
T Consensus        20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv   99 (327)
T 3aln_A           20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC   99 (327)
T ss_dssp             CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence            3467888999999999999999999899999999997653 344556666766 66778999999999999999999999


Q ss_pred             EEecCCCChhhhhhh----cCCCCCHHHHHHHHHHHHHHHHHHHhhcCC-CeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          428 YEFMPNGSLDSHLFK----ENSLLTWEFRYKIAQDLASGLLYLQEEWEQ-CVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      |||+++ +|.+++..    ....+++..+..++.|++.||.|||+   . +++||||||+|||++.++.+||+|||+++.
T Consensus       100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~  175 (327)
T 3aln_A          100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ  175 (327)
T ss_dssp             ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred             EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence            999975 78777642    25679999999999999999999998   6 999999999999999999999999999976


Q ss_pred             ccccCCcceeecccCccccCcccc----ccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcc
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECA----TTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL  578 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l  578 (645)
                      .....  ......||+.|+|||++    .+..++.++|||||||++|||++|+.||.......     +.    .  ..+
T Consensus       176 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~----~--~~~  242 (327)
T 3aln_A          176 LVDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-----DQ----L--TQV  242 (327)
T ss_dssp             --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------------CCC
T ss_pred             ccccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-----HH----H--HHH
Confidence            54322  22334689999999998    45668999999999999999999999997533210     00    0  011


Q ss_pred             ccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          579 LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       579 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .....+.+...........+.+++.+||+.||++|||++|++++.++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~  289 (327)
T 3aln_A          243 VKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI  289 (327)
T ss_dssp             CCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHH
T ss_pred             hcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHH
Confidence            11111111111111123467788899999999999999999998875

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=7.9e-39  Score=338.27  Aligned_cols=264  Identities=20%  Similarity=0.289  Sum_probs=209.8

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChh-----------------hHHHHHHHHHHHHhcCCCCccE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ-----------------GIKEYASEVKIISRLRHRNLVQ  413 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~Ei~~l~~l~H~nlv~  413 (645)
                      .++|...+.||+|+||.||+|.+  +++.||+|++......                 ..+.+.+|+.++.+++||||++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~  107 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT  107 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence            46899999999999999999999  6899999998643211                 1278999999999999999999


Q ss_pred             EEeeeeeCCeEEEEEEecCCCChhhh------hhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE
Q 042831          414 LLGWCHEKKELLLVYEFMPNGSLDSH------LFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML  486 (645)
Q Consensus       414 l~~~~~~~~~~~lV~Ey~~~gsL~~~------l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl  486 (645)
                      +++++.+.+..++||||+++++|.++      +... ...+++..++.++.||+.||.|||+  ..+++||||||+||++
T Consensus       108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~  185 (348)
T 2pml_X          108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILM  185 (348)
T ss_dssp             CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEE
T ss_pred             EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEE
Confidence            99999999999999999999999998      5432 5679999999999999999999997  3799999999999999


Q ss_pred             CCCCcEEEeeccCcccccccCCcceeecccCccccCccccccC-CCCc-chhHHHHHHHHHHHHcCCCCCCCCCCCCchh
Q 042831          487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG-KASK-ESDVYSFGIVALEIACGRKPINPKAPQGQVS  564 (645)
Q Consensus       487 d~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~-~sDV~SfGvll~elltG~~pf~~~~~~~~~~  564 (645)
                      +.++.+||+|||++......   ......|+..|+|||.+.+. .++. ++||||||+++|||++|+.||......  ..
T Consensus       186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~  260 (348)
T 2pml_X          186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--VE  260 (348)
T ss_dssp             CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--HH
T ss_pred             cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--HH
Confidence            99999999999999865432   33446789999999999887 5666 999999999999999999999864432  11


Q ss_pred             HHHHHHHHhcCCccccccCc-----ccc----CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          565 LLQWVWDLYGNGKLLEAVDP-----RLC----RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       565 l~~~~~~~~~~~~l~~~~d~-----~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      +.    .....+......+.     .+.    ..........+.+++.+||+.||++|||++|++++.++..
T Consensus       261 ~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~  328 (348)
T 2pml_X          261 LF----NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD  328 (348)
T ss_dssp             HH----HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HH----HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccC
Confidence            12    22222221111000     000    0000112356778889999999999999999999999864

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=5e-39  Score=346.39  Aligned_cols=263  Identities=21%  Similarity=0.284  Sum_probs=197.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC------eEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK------ELL  425 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~------~~~  425 (645)
                      .+|...++||+|+||.||+|++..+++ ||+|++......    ..+|++++++++||||+++++++...+      ..+
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  114 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN  114 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence            468889999999999999999987655 888887654321    236999999999999999999986443      378


Q ss_pred             EEEEecCCCChhhhhh--hcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC-CCCcEEEeeccCccc
Q 042831          426 LVYEFMPNGSLDSHLF--KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD-SNFNAKIGDFGLARL  502 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld-~~~~~kl~DfGla~~  502 (645)
                      +||||++++.+.....  .....+++..+..++.||+.||.|||+   .+|+||||||+|||++ .++.+||+|||+++.
T Consensus       115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence            9999997754443332  235679999999999999999999999   8999999999999999 799999999999987


Q ss_pred             ccccCCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC-----
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG-----  576 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~-----  576 (645)
                      .....  ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+.   ...+....+..     
T Consensus       192 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~---l~~i~~~~g~p~~~~~  266 (394)
T 4e7w_A          192 LIAGE--PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ---LVEIIKVLGTPSREQI  266 (394)
T ss_dssp             CCTTC--CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCHHHH
T ss_pred             ccCCC--CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHH
Confidence            64322  23345789999999998765 589999999999999999999999976442211   11111111110     


Q ss_pred             -----ccccccCccccC-----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          577 -----KLLEAVDPRLCR-----DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       577 -----~l~~~~d~~l~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                           ...+..-+....     .+.......+.+++.+||+.||++|||+.|+++|.++..
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (394)
T 4e7w_A          267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE  327 (394)
T ss_dssp             HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGST
T ss_pred             HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhh
Confidence                 000000011000     011112346788899999999999999999999999863

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=6.2e-39  Score=340.27  Aligned_cols=262  Identities=22%  Similarity=0.287  Sum_probs=203.2

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe-----
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE-----  423 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~-----  423 (645)
                      .++|...+.||+|+||.||+|++..+|+.||||++...  .....+.+.+|+.++.+++||||+++++++...+.     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            45788899999999999999999999999999999654  33446788999999999999999999999987653     


Q ss_pred             -EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          424 -LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       424 -~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                       .++||||++ ++|.+++.   ..+++..+..++.||+.||.|||+   .+|+||||||+||+++.++.+||+|||+++.
T Consensus       103 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~  175 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARH  175 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred             eEEEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence             599999996 68888773   348999999999999999999999   8999999999999999999999999999976


Q ss_pred             ccccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC-----
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG-----  576 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~-----  576 (645)
                      ...    ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......   .....+....+..     
T Consensus       176 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~  248 (353)
T 3coi_A          176 ADA----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL---DQLTQILKVTGVPGTEFV  248 (353)
T ss_dssp             ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH---HHHHHHHHHHCBCCHHHH
T ss_pred             CCC----CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCCHHHH
Confidence            432    2234578999999999877 67899999999999999999999999754321   1111111111100     


Q ss_pred             -------------ccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          577 -------------KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       577 -------------~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                                   .+.....+.+. .........+.+++.+||+.||++|||++|+++|.++..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  311 (353)
T 3coi_A          249 QKLNDKAAKSYIQSLPQTPRKDFT-QLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP  311 (353)
T ss_dssp             TTCSCHHHHHHHHTSCBCSSCCTT-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HHHhhHHHHHHHHhCcCCCCccHH-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence                         00000000110 111122356778889999999999999999999999863

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=1.5e-39  Score=338.87  Aligned_cols=267  Identities=21%  Similarity=0.324  Sum_probs=205.9

Q ss_pred             CccChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcC--CCCccEEE
Q 042831          340 KRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLR--HRNLVQLL  415 (645)
Q Consensus       340 ~~~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~--H~nlv~l~  415 (645)
                      ..+.++.+....++|...+.||+|+||.||++.+.. ++.||||.+...  .....+.+.+|++++.+++  |+||++++
T Consensus        16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~   94 (313)
T 3cek_A           16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY   94 (313)
T ss_dssp             ----CCEEEETTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEE
T ss_pred             CCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCC-CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEE
Confidence            455666777778889999999999999999999864 889999998654  3456678999999999997  59999999


Q ss_pred             eeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEe
Q 042831          416 GWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIG  495 (645)
Q Consensus       416 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~  495 (645)
                      +++..++..++||| +.+++|.+++... ..+++..+..++.||++||.|||+   .+|+||||||+|||+++ +.+||+
T Consensus        95 ~~~~~~~~~~lv~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~  168 (313)
T 3cek_A           95 DYEITDQYIYMVME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLI  168 (313)
T ss_dssp             EEEECSSEEEEEEC-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEEC
T ss_pred             EEeecCCEEEEEEe-cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEe
Confidence            99999999999999 6689999998654 578999999999999999999999   89999999999999965 899999


Q ss_pred             eccCcccccccCCc-ceeecccCccccCcccccc-----------CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCch
Q 042831          496 DFGLARLVEHAKGS-QTTVLAGTMGYMAPECATT-----------GKASKESDVYSFGIVALEIACGRKPINPKAPQGQV  563 (645)
Q Consensus       496 DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~  563 (645)
                      |||+++........ ......|++.|+|||.+..           ..++.++||||||+++|||++|+.||......   
T Consensus       169 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---  245 (313)
T 3cek_A          169 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---  245 (313)
T ss_dssp             CCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH---
T ss_pred             eccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH---
Confidence            99999866433221 2234568999999999865           46889999999999999999999999753321   


Q ss_pred             hHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          564 SLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       564 ~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                        .........         +.....++......+.+++.+||+.||++||+++|++++.++..
T Consensus       246 --~~~~~~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~  298 (313)
T 3cek_A          246 --ISKLHAIID---------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  298 (313)
T ss_dssp             --HHHHHHHHC---------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHC
T ss_pred             --HHHHHHHHh---------cccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccC
Confidence              111111111         11111111111245677889999999999999999999998764

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=6.1e-39  Score=366.86  Aligned_cols=261  Identities=24%  Similarity=0.368  Sum_probs=208.1

Q ss_pred             HHHHHhhcCCCCCCccCcCCcEEEEEEEEcC---CCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee
Q 042831          345 KELALATNDFNDDQKLGQGGFGGVYKGFFRE---TNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE  420 (645)
Q Consensus       345 ~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~---~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~  420 (645)
                      .+.....++|...+.||+|+||.||+|.+..   .+..||+|.+... .....+.+.+|+.++.+++||||+++++++. 
T Consensus       383 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-  461 (656)
T 2j0j_A          383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-  461 (656)
T ss_dssp             GGTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-
T ss_pred             cccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-
Confidence            3444556778889999999999999999864   3568999998754 3445578999999999999999999999985 


Q ss_pred             CCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCc
Q 042831          421 KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA  500 (645)
Q Consensus       421 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla  500 (645)
                      ++..++||||+++|+|.+++......+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++
T Consensus       462 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a  538 (656)
T 2j0j_A          462 ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLS  538 (656)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred             cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCC
Confidence            456899999999999999998776779999999999999999999999   89999999999999999999999999999


Q ss_pred             ccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccc
Q 042831          501 RLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLL  579 (645)
Q Consensus       501 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~  579 (645)
                      +..............+++.|+|||++....++.++|||||||++|||++ |+.||......   .....    ...+.. 
T Consensus       539 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---~~~~~----i~~~~~-  610 (656)
T 2j0j_A          539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIGR----IENGER-  610 (656)
T ss_dssp             CSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHH----HHHTCC-
T ss_pred             eecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH---HHHHH----HHcCCC-
Confidence            8765443333344567889999999998999999999999999999997 99999754321   12221    111211 


Q ss_pred             cccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       580 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                          ..+...+    ...+.+++.+||+.||++|||+.|+++.|+.
T Consensus       611 ----~~~~~~~----~~~l~~li~~~l~~dP~~RPs~~el~~~L~~  648 (656)
T 2j0j_A          611 ----LPMPPNC----PPTLYSLMTKCWAYDPSRRPRFTELKAQLST  648 (656)
T ss_dssp             ----CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----CCCCccc----cHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence                1111222    2467788899999999999999999998863

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=9.8e-39  Score=337.73  Aligned_cols=265  Identities=19%  Similarity=0.270  Sum_probs=207.8

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCC-eEEEEEEeccCChhhHHHHHHHHHHHHhcCCCC------ccEEEeeeeeCCe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETN-SYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN------LVQLLGWCHEKKE  423 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~-~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~n------lv~l~~~~~~~~~  423 (645)
                      .++|...+.||+|+||.||+|.+..++ +.||+|+++.. ....+.+.+|++++.+++|++      ++.+.+++...+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            468999999999999999999998766 79999998643 344567889999999997665      8999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE----------------
Q 042831          424 LLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML----------------  486 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl----------------  486 (645)
                      .++||||+ +++|.+++... ...+++..++.++.||+.||.|||+   .+|+||||||+|||+                
T Consensus        97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~  172 (355)
T 2eu9_A           97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCE  172 (355)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred             EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeccccccccccccccc
Confidence            99999999 66777776554 3579999999999999999999998   899999999999999                


Q ss_pred             ---CCCCcEEEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCch
Q 042831          487 ---DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQV  563 (645)
Q Consensus       487 ---d~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~  563 (645)
                         +.++.+||+|||+++....    ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+. 
T Consensus       173 ~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-  247 (355)
T 2eu9_A          173 EKSVKNTSIRVADFGSATFDHE----HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH-  247 (355)
T ss_dssp             EEEESCCCEEECCCTTCEETTS----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-
T ss_pred             ccccCCCcEEEeecCccccccc----cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH-
Confidence               5678999999999976432    22345789999999999999999999999999999999999999975443221 


Q ss_pred             hHHHHHHHHhcC-----------Cccc------------------cccCc-cccCCCCHHHHHHHHHHHHHcCCCCCCCC
Q 042831          564 SLLQWVWDLYGN-----------GKLL------------------EAVDP-RLCRDFDGQQIERLMIVGLWCAHPDENLR  613 (645)
Q Consensus       564 ~l~~~~~~~~~~-----------~~l~------------------~~~d~-~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R  613 (645)
                        ...+......           ....                  +...+ ......+..+...+.+++.+||+.||++|
T Consensus       248 --~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  325 (355)
T 2eu9_A          248 --LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR  325 (355)
T ss_dssp             --HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred             --HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence              1111111110           0000                  00000 00001122345678899999999999999


Q ss_pred             CCHHHHHHHhccCC
Q 042831          614 PSIRQVIHVLNFEA  627 (645)
Q Consensus       614 Ps~~evl~~L~~~~  627 (645)
                      ||++|+++|.++..
T Consensus       326 pt~~e~l~hp~f~~  339 (355)
T 2eu9_A          326 ITLAEALLHPFFAG  339 (355)
T ss_dssp             CCHHHHTTSGGGGG
T ss_pred             cCHHHHhcChhhcC
Confidence            99999999999864

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=4.1e-39  Score=336.03  Aligned_cols=263  Identities=23%  Similarity=0.406  Sum_probs=206.1

Q ss_pred             cChHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeee
Q 042831          342 FPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCH  419 (645)
Q Consensus       342 ~~~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~  419 (645)
                      ...++.....++|...+.||+|+||.||+|.+.+   .+|+|.+...  .....+.+.+|+.++.+++||||+++++++.
T Consensus        23 ~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   99 (319)
T 2y4i_B           23 IFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM   99 (319)
T ss_dssp             CCGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEE
T ss_pred             cccccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEe
Confidence            3455666667889999999999999999999864   3999988643  2333456778999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccC
Q 042831          420 EKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL  499 (645)
Q Consensus       420 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGl  499 (645)
                      ..+..++||||+++++|.+++......+++..++.++.||+.||.|||+   .+++||||||+||+++ ++.+||+|||+
T Consensus       100 ~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~  175 (319)
T 2y4i_B          100 SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGL  175 (319)
T ss_dssp             CSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSC
T ss_pred             cCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCC
Confidence            9999999999999999999997766789999999999999999999999   8999999999999998 67999999999


Q ss_pred             cccccccC----CcceeecccCccccCcccccc---------CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHH
Q 042831          500 ARLVEHAK----GSQTTVLAGTMGYMAPECATT---------GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL  566 (645)
Q Consensus       500 a~~~~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~  566 (645)
                      ++......    ........|++.|+|||++..         ..++.++||||||+++|||++|+.||......   .. 
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~-  251 (319)
T 2y4i_B          176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE---AI-  251 (319)
T ss_dssp             CC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH---HH-
T ss_pred             ccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HH-
Confidence            87553211    122334568999999999864         45789999999999999999999999754321   11 


Q ss_pred             HHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          567 QWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       567 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                        .+ ....+........    .+    ...+.+++..||+.||++|||++++++.|+.-
T Consensus       252 --~~-~~~~~~~~~~~~~----~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l  300 (319)
T 2y4i_B          252 --IW-QMGTGMKPNLSQI----GM----GKEISDILLFCWAFEQEERPTFTKLMDMLEKL  300 (319)
T ss_dssp             --HH-HHHTTCCCCCCCS----SC----CTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC
T ss_pred             --HH-HhccCCCCCCCcC----CC----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence              11 1122211111111    11    12467788999999999999999999999864

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.9e-39  Score=337.82  Aligned_cols=256  Identities=23%  Similarity=0.365  Sum_probs=197.7

Q ss_pred             HHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh------hhHHHHHHHHHHHHhc----CCCCccEEEe
Q 042831          347 LALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK------QGIKEYASEVKIISRL----RHRNLVQLLG  416 (645)
Q Consensus       347 l~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~------~~~~~~~~Ei~~l~~l----~H~nlv~l~~  416 (645)
                      .....++|...+.||+|+||.||+|++..+++.||||++.....      .....+.+|+.++.++    +|+||+++++
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            34456789999999999999999999998999999999865432      1233456799999998    8999999999


Q ss_pred             eeeeCCeEEEEEEe-cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC-CCCcEEE
Q 042831          417 WCHEKKELLLVYEF-MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD-SNFNAKI  494 (645)
Q Consensus       417 ~~~~~~~~~lV~Ey-~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld-~~~~~kl  494 (645)
                      ++...+..++|+|| +.+++|.+++... ..+++..++.++.||+.||.|||+   .+|+||||||+||+++ .++.+||
T Consensus       106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl  181 (312)
T 2iwi_A          106 WFETQEGFMLVLERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAKL  181 (312)
T ss_dssp             EC-----CEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEEE
T ss_pred             EEecCCeEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEEE
Confidence            99999999999999 7899999999654 468999999999999999999999   8999999999999999 8899999


Q ss_pred             eeccCcccccccCCcceeecccCccccCccccccCCCC-cchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHh
Q 042831          495 GDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKAS-KESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY  573 (645)
Q Consensus       495 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t-~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~  573 (645)
                      +|||+++.....   ......|+..|+|||++.+..+. .++||||||+++|||++|+.||....     ...       
T Consensus       182 ~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~-------  246 (312)
T 2iwi_A          182 IDFGSGALLHDE---PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-----EIL-------  246 (312)
T ss_dssp             CCCSSCEECCSS---CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HHH-------
T ss_pred             EEcchhhhcccC---cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-----HHh-------
Confidence            999999866432   23345689999999998877664 58999999999999999999996321     100       


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCCCC
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPAL  632 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p~~  632 (645)
                       ...      ..+....    ...+.+++.+||+.||++|||++|++++.++..+...+
T Consensus       247 -~~~------~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~~~  294 (312)
T 2iwi_A          247 -EAE------LHFPAHV----SPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDV  294 (312)
T ss_dssp             -HTC------CCCCTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC-----
T ss_pred             -hhc------cCCcccC----CHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchhcc
Confidence             000      1111122    24567888999999999999999999999987654433

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=3.2e-38  Score=324.64  Aligned_cols=257  Identities=25%  Similarity=0.350  Sum_probs=207.7

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ..++|...+.||+|+||.||+|++..+++.||+|++...  .....+.+.+|++++.+++||||+++++++...+..++|
T Consensus        20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   99 (287)
T 2wei_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (287)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence            346789999999999999999999988999999998654  234567899999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCC---CcEEEeeccCccccc
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN---FNAKIGDFGLARLVE  504 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~---~~~kl~DfGla~~~~  504 (645)
                      +||+++++|.+++... ..+++..++.++.||+.||.|||+   .+++||||||+||+++.+   +.+||+|||++....
T Consensus       100 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~  175 (287)
T 2wei_A          100 GELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (287)
T ss_dssp             ECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred             EEccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence            9999999999888654 468999999999999999999999   899999999999999754   469999999998654


Q ss_pred             ccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          505 HAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       505 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      ...  ......+++.|+|||.+.+ .++.++||||||+++|||++|+.||......   .+.    .....+...... +
T Consensus       176 ~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~----~~~~~~~~~~~~-~  244 (287)
T 2wei_A          176 QNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY---DIL----KRVETGKYAFDL-P  244 (287)
T ss_dssp             CCS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH----HHHHHCCCCCCS-G
T ss_pred             CCC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH---HHH----HHHHcCCCCCCc-h
Confidence            322  2233458899999998865 5899999999999999999999999754321   111    112222211100 1


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                       ....+    ...+.+++.+||+.||++|||+.|++++.++.
T Consensus       245 -~~~~~----~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~  281 (287)
T 2wei_A          245 -QWRTI----SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ  281 (287)
T ss_dssp             -GGTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHH
T ss_pred             -hhhhc----CHHHHHHHHHHcccChhhCcCHHHHhcCHHHh
Confidence             01122    24577888999999999999999999988764

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.5e-38  Score=335.34  Aligned_cols=259  Identities=22%  Similarity=0.274  Sum_probs=178.1

Q ss_pred             hhcCCCCCC-ccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeee----CCeE
Q 042831          350 ATNDFNDDQ-KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE----KKEL  424 (645)
Q Consensus       350 ~~~~f~~~~-~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~----~~~~  424 (645)
                      ..++|...+ .||+|+||.||+|++..+++.||||++.... ...   .+....+..++|||++++++++..    +...
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-KAR---QEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-HHH---HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-HHH---HHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            346788744 6999999999999999999999999986532 111   222334566799999999999876    4568


Q ss_pred             EEEEEecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC---CCcEEEeeccCc
Q 042831          425 LLVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLA  500 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~---~~~~kl~DfGla  500 (645)
                      ++||||+++|+|.+++.... ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.   ++.+||+|||++
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~  178 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA  178 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence            99999999999999997653 479999999999999999999999   89999999999999976   455999999999


Q ss_pred             ccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc
Q 042831          501 RLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE  580 (645)
Q Consensus       501 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~  580 (645)
                      +....   .......||+.|+|||++....++.++|||||||++|||++|+.||..........   ........+.. .
T Consensus       179 ~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~-~  251 (336)
T 3fhr_A          179 KETTQ---NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP---GMKRRIRLGQY-G  251 (336)
T ss_dssp             EEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------C
T ss_pred             eeccc---cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh---hHHHhhhcccc-c
Confidence            76542   22234568999999999988889999999999999999999999997544321110   00000000100 0


Q ss_pred             ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       581 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                       ........    ....+.+++.+||+.||++|||++|++++.++..
T Consensus       252 -~~~~~~~~----~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  293 (336)
T 3fhr_A          252 -FPNPEWSE----VSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ  293 (336)
T ss_dssp             -CCTTTSTT----CCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             -cCchhhcc----CCHHHHHHHHHHCCCChhHCcCHHHHhcCccccc
Confidence             00000111    2345778889999999999999999999998753

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=5.6e-38  Score=327.13  Aligned_cols=257  Identities=24%  Similarity=0.343  Sum_probs=186.1

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-hhH-HHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-QGI-KEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-~~~-~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ..++|...+.||+|+||.||+|.+..+|+.||||++..... ... +.+.++..++..++||||+++++++...+..++|
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv  102 (318)
T 2dyl_A           23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA  102 (318)
T ss_dssp             CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence            34678888999999999999999998899999999976532 233 3344555677888999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCC-CeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ-CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      |||+ ++.+..+.......+++..+..++.||+.||.|||+   + +++||||||+||+++.++.+||+|||++......
T Consensus       103 ~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  178 (318)
T 2dyl_A          103 MELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD  178 (318)
T ss_dssp             ECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred             Eecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence            9999 555655554456779999999999999999999998   5 8999999999999999999999999999765432


Q ss_pred             CCcceeecccCccccCccccc-----cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc
Q 042831          507 KGSQTTVLAGTMGYMAPECAT-----TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA  581 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~-----~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~  581 (645)
                      .  ......|++.|+|||++.     ...++.++|||||||++|||++|+.||......  ....   ....... ... 
T Consensus       179 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~---~~~~~~~-~~~-  249 (318)
T 2dyl_A          179 K--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD--FEVL---TKVLQEE-PPL-  249 (318)
T ss_dssp             ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH--HHHH---HHHHHSC-CCC-
T ss_pred             c--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc--HHHH---HHHhccC-CCC-
Confidence            2  223456899999999984     456889999999999999999999999753321  1111   1111111 100 


Q ss_pred             cCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       582 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      . +. ...++    ..+.+++.+||+.||++||+++|++++.++
T Consensus       250 ~-~~-~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~h~~~  287 (318)
T 2dyl_A          250 L-PG-HMGFS----GDFQSFVKDCLTKDHRKRPKYNKLLEHSFI  287 (318)
T ss_dssp             C-CS-SSCCC----HHHHHHHHHHTCSCTTTSCCHHHHTTSHHH
T ss_pred             C-Cc-cCCCC----HHHHHHHHHHccCChhHCcCHHHHhhCHHH
Confidence            0 00 01122    356778899999999999999999998875

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=3.8e-39  Score=337.30  Aligned_cols=253  Identities=23%  Similarity=0.376  Sum_probs=205.8

Q ss_pred             HHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh------hhHHHHHHHHHHHHhcC--CCCccEEEe
Q 042831          345 KELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK------QGIKEYASEVKIISRLR--HRNLVQLLG  416 (645)
Q Consensus       345 ~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~------~~~~~~~~Ei~~l~~l~--H~nlv~l~~  416 (645)
                      ++.....++|...+.||+|+||.||+|++..+++.||||++.....      ...+.+.+|+.++.+++  |+|++++++
T Consensus        36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~  115 (320)
T 3a99_A           36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD  115 (320)
T ss_dssp             ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred             cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence            3344456789999999999999999999999999999999865421      12345678999999996  599999999


Q ss_pred             eeeeCCeEEEEEEecCC-CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC-CCCcEEE
Q 042831          417 WCHEKKELLLVYEFMPN-GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD-SNFNAKI  494 (645)
Q Consensus       417 ~~~~~~~~~lV~Ey~~~-gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld-~~~~~kl  494 (645)
                      ++...+..++|+||+.+ ++|.+++... ..+++..++.++.||+.||.|||+   .+|+||||||+|||++ +++.+||
T Consensus       116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL  191 (320)
T 3a99_A          116 WFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKL  191 (320)
T ss_dssp             EEECSSEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEE
T ss_pred             EEecCCcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEE
Confidence            99999999999999976 8999998653 568999999999999999999998   8999999999999999 7899999


Q ss_pred             eeccCcccccccCCcceeecccCccccCccccccCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHh
Q 042831          495 GDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLY  573 (645)
Q Consensus       495 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~  573 (645)
                      +|||+++.....   ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||....     ..       .
T Consensus       192 ~Dfg~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~-------~  256 (320)
T 3a99_A          192 IDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EI-------I  256 (320)
T ss_dssp             CCCTTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HH-------H
T ss_pred             eeCccccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-----hh-------h
Confidence            999999866432   2334568999999999887765 788999999999999999999996321     00       0


Q ss_pred             cCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          574 GNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       574 ~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                       .+..      .+...++    ..+.+++.+||+.||++|||++|++++.++..
T Consensus       257 -~~~~------~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~  299 (320)
T 3a99_A          257 -RGQV------FFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD  299 (320)
T ss_dssp             -HCCC------CCSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred             -cccc------cccccCC----HHHHHHHHHHccCChhhCcCHHHHhcCHhhcC
Confidence             0110      1112222    35678889999999999999999999999864

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=2.3e-37  Score=337.64  Aligned_cols=254  Identities=22%  Similarity=0.248  Sum_probs=189.7

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEEEEec
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      .|...+.||+|+||+||.+.. .+|+.||||++...   ..+.+.+|+.++.++ +||||+++++++.+++..++|||||
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~   91 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC   91 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred             eeeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence            344567899999999987543 45899999998643   234678899999986 8999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCC------CCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC-------------CCcE
Q 042831          432 PNGSLDSHLFKENSL------LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-------------NFNA  492 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~-------------~~~~  492 (645)
                      . |+|.+++......      .++..++.++.||+.||.|||+   .+|+||||||+|||++.             ++.+
T Consensus        92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~  167 (434)
T 2rio_A           92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI  167 (434)
T ss_dssp             S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred             C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEE
Confidence            5 7999999654321      1333457899999999999998   89999999999999965             4589


Q ss_pred             EEeeccCcccccccCCc---ceeecccCccccCcccccc-------CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCC
Q 042831          493 KIGDFGLARLVEHAKGS---QTTVLAGTMGYMAPECATT-------GKASKESDVYSFGIVALEIAC-GRKPINPKAPQG  561 (645)
Q Consensus       493 kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~  561 (645)
                      ||+|||+++........   ......||+.|+|||++.+       ..++.++|||||||++|||++ |+.||.......
T Consensus       168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~  247 (434)
T 2rio_A          168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE  247 (434)
T ss_dssp             EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred             EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence            99999999876543221   2234579999999999865       568999999999999999999 999997543211


Q ss_pred             chhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          562 QVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       562 ~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                          ....     .+...   .+.+....+......+.+++.+||+.||++|||+.|+++|.++.
T Consensus       248 ----~~i~-----~~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~  300 (434)
T 2rio_A          248 ----SNII-----RGIFS---LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW  300 (434)
T ss_dssp             ----HHHH-----HTCCC---CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             ----HHHh-----cCCCC---cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccC
Confidence                1111     11100   01111122345567888999999999999999999999998874

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=1e-37  Score=339.86  Aligned_cols=257  Identities=22%  Similarity=0.264  Sum_probs=193.3

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEE
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .....+|...+.||+|+||+||... ..+++.||||++.....   ..+.+|++++.++ +||||+++++++.+.+..++
T Consensus        20 ~i~~~~y~~~~~LG~G~~G~V~~~~-~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~l   95 (432)
T 3p23_A           20 IVGKISFCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYI   95 (432)
T ss_dssp             EETTEEEEEEEEEEECGGGCEEEEE-ESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEE
T ss_pred             EEccEEEecCCeeecCcCEEEEEEE-EeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEE
Confidence            3445578889999999999965433 34578999999865432   2356799999999 79999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC-----CCcEEEeeccCcc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-----NFNAKIGDFGLAR  501 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~-----~~~~kl~DfGla~  501 (645)
                      |||||+ |+|.+++......+.+..+..++.||+.||.|||+   .+|+||||||+|||++.     ...+||+|||+++
T Consensus        96 v~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~  171 (432)
T 3p23_A           96 AIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK  171 (432)
T ss_dssp             EEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred             EEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence            999995 69999997766556666778999999999999999   89999999999999943     3468899999998


Q ss_pred             cccccCC--cceeecccCccccCccccc---cCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcC
Q 042831          502 LVEHAKG--SQTTVLAGTMGYMAPECAT---TGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGN  575 (645)
Q Consensus       502 ~~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~  575 (645)
                      .......  .......||+.|+|||++.   ...++.++|||||||++|||++ |+.||......    ..   ......
T Consensus       172 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~----~~---~~~~~~  244 (432)
T 3p23_A          172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR----QA---NILLGA  244 (432)
T ss_dssp             CC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH----HH---HHHTTC
T ss_pred             eccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH----HH---HHHhcc
Confidence            7653321  2234467999999999987   4567889999999999999999 99999643221    11   111111


Q ss_pred             CccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          576 GKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       576 ~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      .. .....      ........+.+++.+||+.||++|||++|+++|.++.
T Consensus       245 ~~-~~~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~  288 (432)
T 3p23_A          245 CS-LDCLH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFW  288 (432)
T ss_dssp             CC-CTTSC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTC
T ss_pred             CC-ccccC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCcccc
Confidence            11 11111      1123344567889999999999999999999998874

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=1.9e-37  Score=349.75  Aligned_cols=265  Identities=26%  Similarity=0.350  Sum_probs=205.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee------CCe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE------KKE  423 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~------~~~  423 (645)
                      .++|...++||+|+||.||+|.+..+|+.||||++... .....+.+.+|++++.+++||||+++++++..      .+.
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            36899999999999999999999988999999998754 44556789999999999999999999999765      677


Q ss_pred             EEEEEEecCCCChhhhhhhcC--CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCc---EEEeecc
Q 042831          424 LLLVYEFMPNGSLDSHLFKEN--SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFN---AKIGDFG  498 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~---~kl~DfG  498 (645)
                      .++||||+++|+|.+++....  ..+++..++.++.|++.||.|||+   .+|+||||||+||+++.++.   +||+|||
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence            899999999999999997533  368999999999999999999999   89999999999999987664   9999999


Q ss_pred             CcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCC--
Q 042831          499 LARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG--  576 (645)
Q Consensus       499 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~--  576 (645)
                      +++......  ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.....     ...|.......+  
T Consensus       170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-----~~~~~~~i~~~~~~  242 (676)
T 3qa8_A          170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-----PVQWHGKVREKSNE  242 (676)
T ss_dssp             CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-----HHHSSTTCC-----
T ss_pred             ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-----hhhhhhhhhcccch
Confidence            998764332  23446799999999999999999999999999999999999999975321     111110000000  


Q ss_pred             --ccccccC------c--cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          577 --KLLEAVD------P--RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       577 --~l~~~~d------~--~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                        ...+...      .  .............+..++..||+.||++|||++|++++.++
T Consensus       243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F  301 (676)
T 3qa8_A          243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCF  301 (676)
T ss_dssp             -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTH
T ss_pred             hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHH
Confidence              0000000      0  00112334456778899999999999999999998777664

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=1.4e-36  Score=312.89  Aligned_cols=229  Identities=15%  Similarity=0.143  Sum_probs=183.8

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      .++|...+.||+|+||.||+|.+..+++.||||.+....   ....+.+.+|+..+.+++||||+++++++.+++..++|
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  109 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV  109 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence            467999999999999999999999999999999997542   34457899999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||+++++|.+++..  . .......+|+.||+.||.|||+   ++|+||||||+|||++.++.+||++++         
T Consensus       110 ~e~~~g~~L~~~l~~--~-~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~---------  174 (286)
T 3uqc_A          110 AEWIRGGSLQEVADT--S-PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA---------  174 (286)
T ss_dssp             EECCCEEEHHHHHTT--C-CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred             EEecCCCCHHHHHhc--C-CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc---------
Confidence            999999999999843  2 3555788999999999999999   899999999999999999999998443         


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc-cc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP-RL  586 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~-~l  586 (645)
                                  |++       .++.++|||||||++|||++|+.||.............   . ...+..   ..+ .+
T Consensus       175 ------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~---~-~~~~~~---~~~~~~  228 (286)
T 3uqc_A          175 ------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE---R-DTAGQP---IEPADI  228 (286)
T ss_dssp             ------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC---B-CTTSCB---CCHHHH
T ss_pred             ------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH---H-HhccCC---CChhhc
Confidence                        333       36889999999999999999999998654322110000   0 000000   000 11


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ....    ...+..++.+||+.||++| |+.|+++.|+.
T Consensus       229 ~~~~----~~~l~~li~~~l~~dP~~R-s~~el~~~L~~  262 (286)
T 3uqc_A          229 DRDI----PFQISAVAARSVQGDGGIR-SASTLLNLMQQ  262 (286)
T ss_dssp             CTTS----CHHHHHHHHHHHCTTSSCC-CHHHHHHHHHH
T ss_pred             ccCC----CHHHHHHHHHHcccCCccC-CHHHHHHHHHH
Confidence            1122    2457788899999999999 99999999985

>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1

Probab=100.00  E-value=1.5e-36  Score=268.90  Aligned_cols=114  Identities=41%  Similarity=0.619  Sum_probs=106.2

Q ss_pred             CCEEEEEEecccCC--CCCCCCceeeecCCCcccceeeecccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceee
Q 042831          147 IPFVAVEFDVYVNS--WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLD  224 (645)
Q Consensus       147 ~~~vaVEfDt~~n~--~d~~~~hvgidvns~~s~~~~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls  224 (645)
                      ||+|||||||++|.  |||++|||||||||+.|.++++|+  +.+|+.++|||+||+.+++|+|+|++.+. +  .|+|+
T Consensus         1 n~~vAVEFDT~~N~e~~Dp~~nHVGIdvNsi~S~~s~~~~--l~sG~~~~v~I~Yd~~~~~L~V~l~~~~~-~--~p~ls   75 (133)
T 1qmo_E            1 SNVVAVEFDTYLNPDYGDPNYIHIGIDVNSIRSKVTAKWD--WQNGKIATAHISYNSVSKRLSVTSYYAGS-K--PATLS   75 (133)
T ss_dssp             CCCEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEECC--CCTTSCEEEEEEEETTTTEEEEEEECSSS-C--CEEEE
T ss_pred             CCEEEEEEeCCcCccccCCCCCeeEEecccccccceeeeE--EcCCCEEEEEEEEeCCCcEEEEEEccCCC-c--cceEE
Confidence            57899999999997  999999999999999999999984  78999999999999999999999998664 3  78999


Q ss_pred             EeeccCcCCCCceEEEEeecccceeeeEEEEEeeccCcccc
Q 042831          225 YQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLEM  265 (645)
Q Consensus       225 ~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~wsf~~~~~~  265 (645)
                      +.+||+++|+|+||||||||||...|.|+|++|+|++.+.+
T Consensus        76 ~~vdLs~~l~e~v~VGFSAsTG~~~~~h~IlsWsF~s~l~~  116 (133)
T 1qmo_E           76 YDIELHTVLPEWVRVGLSASTGQDKERNTVHSWSFTSSLWT  116 (133)
T ss_dssp             EECCGGGTSCSEEEEEEEEECSSSCCEEEEEEEEEEEEEEE
T ss_pred             EeechHHhccccEEEEEEeccCCCcceeEEEEEEEEeeCCC
Confidence            99999999999999999999999999999999999887643

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=5e-37  Score=332.84  Aligned_cols=246  Identities=17%  Similarity=0.162  Sum_probs=186.8

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh---hhHHHHHHHHHHHHhcCC-CCccE------------
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK---QGIKEYASEVKIISRLRH-RNLVQ------------  413 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~H-~nlv~------------  413 (645)
                      .+.+|...+.||+|+||.||+|.+..+|+.||||++.....   ...+.+.+|+.++..++| +|...            
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            34557778899999999999999999999999999874322   336789999999999987 32211            


Q ss_pred             ---------EEeeeee-----CCeEEEEEEecCCCChhhhhh------hcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCC
Q 042831          414 ---------LLGWCHE-----KKELLLVYEFMPNGSLDSHLF------KENSLLTWEFRYKIAQDLASGLLYLQEEWEQC  473 (645)
Q Consensus       414 ---------l~~~~~~-----~~~~~lV~Ey~~~gsL~~~l~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~  473 (645)
                               +..++..     ....+++|+++ +++|.+++.      ..+..+++..++.|+.||++||.|||+   ++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~  231 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YG  231 (413)
T ss_dssp             EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CC
Confidence                     1111111     12457777765 789998884      224568899999999999999999998   99


Q ss_pred             eeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeecccCccccCcccc----------ccCCCCcchhHHHHHHH
Q 042831          474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECA----------TTGKASKESDVYSFGIV  543 (645)
Q Consensus       474 ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~t~~sDV~SfGvl  543 (645)
                      |+||||||+|||++.++.+||+|||+++.....    .....| +.|+|||++          ....++.++|||||||+
T Consensus       232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi  306 (413)
T 3dzo_A          232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA  306 (413)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred             cccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence            999999999999999999999999998764432    344567 999999998          55568899999999999


Q ss_pred             HHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHh
Q 042831          544 ALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL  623 (645)
Q Consensus       544 l~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  623 (645)
                      +|||++|+.||..........               ..+..  ...++    +.+.+++..||+.||++||++.|++++.
T Consensus       307 l~elltg~~Pf~~~~~~~~~~---------------~~~~~--~~~~~----~~~~~li~~~l~~dP~~Rpt~~~~l~~~  365 (413)
T 3dzo_A          307 IYWIWCADLPNTDDAALGGSE---------------WIFRS--CKNIP----QPVRALLEGFLRYPKEDRLLPLQAMETP  365 (413)
T ss_dssp             HHHHHHSSCCCCTTGGGSCSG---------------GGGSS--CCCCC----HHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred             HHHHHHCCCCCCCcchhhhHH---------------HHHhh--cccCC----HHHHHHHHHHccCChhhCcCHHHHHhCH
Confidence            999999999997543221110               01110  11222    4577888999999999999998888775


Q ss_pred             cc
Q 042831          624 NF  625 (645)
Q Consensus       624 ~~  625 (645)
                      ++
T Consensus       366 ~~  367 (413)
T 3dzo_A          366 EY  367 (413)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=9.4e-36  Score=308.32  Aligned_cols=231  Identities=22%  Similarity=0.310  Sum_probs=182.6

Q ss_pred             cCCCCC-CccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHH-HhcCCCCccEEEeeeee----CCeEE
Q 042831          352 NDFNDD-QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKII-SRLRHRNLVQLLGWCHE----KKELL  425 (645)
Q Consensus       352 ~~f~~~-~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l-~~l~H~nlv~l~~~~~~----~~~~~  425 (645)
                      ++|... +.||+|+||.||++.+..+++.||+|++...     ..+.+|++++ ..++||||+++++++..    .+..+
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            456655 7799999999999999999999999998643     3567888888 55689999999999876    67899


Q ss_pred             EEEEecCCCChhhhhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC---CCcEEEeeccCcc
Q 042831          426 LVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLAR  501 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~---~~~~kl~DfGla~  501 (645)
                      +||||+++|+|.+++.... ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.   ++.+||+|||+++
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~  168 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK  168 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence            9999999999999997653 479999999999999999999999   89999999999999998   7899999999986


Q ss_pred             cccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA  581 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~  581 (645)
                      ...                       +..++.++|||||||++|||++|+.||.........            ......
T Consensus       169 ~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~------------~~~~~~  213 (299)
T 3m2w_A          169 ETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------------PGMKTR  213 (299)
T ss_dssp             ECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------------CCSCCS
T ss_pred             ccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh------------HHHHHH
Confidence            432                       234678999999999999999999999754322100            000000


Q ss_pred             cCccccCCCCH----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          582 VDPRLCRDFDG----QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       582 ~d~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      +.... ...+.    .....+..++.+||+.||++|||++|+++|.++.
T Consensus       214 ~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~  261 (299)
T 3m2w_A          214 IRMGQ-YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  261 (299)
T ss_dssp             SCTTC-CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             Hhhcc-ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhc
Confidence            00000 00111    1235677888999999999999999999999864

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.9e-36  Score=347.19  Aligned_cols=238  Identities=20%  Similarity=0.280  Sum_probs=192.2

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcC-CCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe----
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRE-TNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE----  423 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~----  423 (645)
                      ..++|...++||+|+||.||+|.+.. +++.||||++... .......+.+|++++.+++||||++++++|...+.    
T Consensus        78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~  157 (681)
T 2pzi_A           78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP  157 (681)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred             eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence            34789999999999999999999976 6899999998654 34556788999999999999999999999987655    


Q ss_pred             -EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          424 -LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       424 -~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                       .+|||||+++++|.+++..   .+++..++.|+.||+.||.|||+   ++|+||||||+|||++.+ .+||+|||+++.
T Consensus       158 ~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~~  230 (681)
T 2pzi_A          158 VGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSR  230 (681)
T ss_dssp             EEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             eeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccchh
Confidence             7999999999999987643   69999999999999999999999   899999999999999986 899999999986


Q ss_pred             ccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      ....     ....||++|+|||++.++. +.++|||||||+++||++|..||.......                    +
T Consensus       231 ~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~--------------------~  284 (681)
T 2pzi_A          231 INSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG--------------------L  284 (681)
T ss_dssp             TTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS--------------------C
T ss_pred             cccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc--------------------c
Confidence            5432     3456999999999987654 899999999999999999998876321110                    0


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHh
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPS-IRQVIHVL  623 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~L  623 (645)
                      ..   ..........+..++.+||+.||++||+ ++++.+.|
T Consensus       285 ~~---~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l  323 (681)
T 2pzi_A          285 PE---DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQL  323 (681)
T ss_dssp             CT---TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred             cc---cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHH
Confidence            00   0000112356778899999999999995 44454444

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=4.7e-36  Score=315.85  Aligned_cols=244  Identities=18%  Similarity=0.194  Sum_probs=188.1

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--------hhhHHHHHHHHHHHHhcC---------CCCccE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--------KQGIKEYASEVKIISRLR---------HRNLVQ  413 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--------~~~~~~~~~Ei~~l~~l~---------H~nlv~  413 (645)
                      .++|...++||+|+||.||+|++  +|+.||||++....        ....+.+.+|+.++++++         |||+++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            45688899999999999999998  57999999997542        223478889999999886         777777


Q ss_pred             EEeeee------------------------------eCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHH
Q 042831          414 LLGWCH------------------------------EKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGL  463 (645)
Q Consensus       414 l~~~~~------------------------------~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL  463 (645)
                      +.+.+.                              ..+..++||||+++|++.+.+.+  ..+++..++.++.||+.||
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHH
Confidence            776532                              26789999999999987777643  5689999999999999999


Q ss_pred             HHHH-hhcCCCeeeccCCCCCeEECCCC--------------------cEEEeeccCcccccccCCcceeecccCccccC
Q 042831          464 LYLQ-EEWEQCVVHRDIKSSNIMLDSNF--------------------NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA  522 (645)
Q Consensus       464 ~yLH-~~~~~~ivH~Dlkp~NILld~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~a  522 (645)
                      .||| +   .+|+||||||+|||++.++                    .+||+|||+++.....      ...||+.|+|
T Consensus       175 ~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~a  245 (336)
T 2vuw_A          175 AVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMD  245 (336)
T ss_dssp             HHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTC
T ss_pred             HHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccC
Confidence            9999 7   8999999999999999887                    8999999999866432      2479999999


Q ss_pred             ccccccCCCCcchhHHHHHHH-HHHHHcCCCCCCCCCCCCchhHHHHH---HHHhcCCccccccCccccCCCCHHHHHHH
Q 042831          523 PECATTGKASKESDVYSFGIV-ALEIACGRKPINPKAPQGQVSLLQWV---WDLYGNGKLLEAVDPRLCRDFDGQQIERL  598 (645)
Q Consensus       523 PE~~~~~~~t~~sDV~SfGvl-l~elltG~~pf~~~~~~~~~~l~~~~---~~~~~~~~l~~~~d~~l~~~~~~~~~~~l  598 (645)
                      ||++.+.. +.++||||++++ .+++++|..||..         ..|.   .+...+...   ................+
T Consensus       246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~---------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~~  312 (336)
T 2vuw_A          246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN---------VLWLHYLTDKMLKQMT---FKTKCNTPAMKQIKRKI  312 (336)
T ss_dssp             SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH---------HHHHHHHHHHHHHTCC---CSSCCCSHHHHHHHHHH
T ss_pred             hhhhcCCC-ccceehhhhhCCCCcccccccCCCcc---------hhhhhHHHHhhhhhhc---cCcccchhhhhhcCHHH
Confidence            99998665 899999998777 7778889999842         1111   111100000   00111111123456778


Q ss_pred             HHHHHHcCCCCCCCCCCHHHHH-HHhcc
Q 042831          599 MIVGLWCAHPDENLRPSIRQVI-HVLNF  625 (645)
Q Consensus       599 ~~l~~~Cl~~dP~~RPs~~evl-~~L~~  625 (645)
                      .+++.+||+.|     |++|++ +|.++
T Consensus       313 ~dli~~~L~~d-----sa~e~l~~Hp~f  335 (336)
T 2vuw_A          313 QEFHRTMLNFS-----SATDLLCQHSLF  335 (336)
T ss_dssp             HHHHHHGGGSS-----SHHHHHHHCGGG
T ss_pred             HHHHHHHhccC-----CHHHHHhcCCCc
Confidence            89999999866     999999 99876

>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A*

Probab=100.00  E-value=2.1e-34  Score=288.81  Aligned_cols=190  Identities=18%  Similarity=0.195  Sum_probs=149.1

Q ss_pred             CCCeEEe-ecccCCCCcEecCC-CCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCC-CCCCCeEEEEEccCCC
Q 042831           47 DDNITYE-RAYPDSNRVIQLPA-NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNS-SYYADGLAFFLAPQGS  123 (645)
Q Consensus        47 ~~~~~~~-~a~~~~~~~~~Lt~-~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~-~~~g~GlaF~l~p~~~  123 (645)
                      ..++.++ +|.+ .+|.|+||+ ..++.|||||+.|+++        +||+|+|+|.|.+... ..+||||||+|+|...
T Consensus        24 i~~~~l~G~a~i-~~g~l~LT~~~~~~~G~~w~~~pi~~--------~sF~t~F~F~I~~~~~~~~~gdGlAF~l~~~~~   94 (253)
T 2dur_A           24 MPLWDFQGSTIL-TSQYVRLTPDERSKEGSIWNHQPCFL--------KDWEMHVHFKVHGTGKKNLHGDGIALWYTRDRL   94 (253)
T ss_dssp             CCSEEEEETCEE-CSSCEEEECSSSSEEEEEEESSCBCC--------SSEEEEEEEEEECCCCTTCCCCEEEEEEESCCS
T ss_pred             cCCEEEccceEE-ECCEEEECCCCCCCEEEEEeCCCCcc--------CcEEEEEEEEEecCCCCCcCCCcEEEEEECCCC
Confidence            3589999 9999 689999999 6678999999999986        6899999999998765 5689999999999863


Q ss_pred             CCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCcccceeee--------------cccC-C
Q 042831          124 KIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSW--------------WSDV-K  188 (645)
Q Consensus       124 ~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~s~~~~~~--------------~~~~-~  188 (645)
                           ..|++||+.+       .++.|||||||++|.++|+  |+++|||++.+..+..|              ..++ .
T Consensus        95 -----~~G~~lG~~~-------~~~gvAVefDT~~n~~~~~--~~~~~I~~~~n~gs~~~d~~~dg~~~~~~~c~~~~~n  160 (253)
T 2dur_A           95 -----VPGPVFGSKD-------NFHGLAIFLDTYPNDETTE--RVFPYISVMVNNGSLSYDHSKDGRWTELAGCTADFRN  160 (253)
T ss_dssp             -----CEETBTEECS-------SCEEEEEEEECSCCCTTCC--SCSSEEEEEEEESCCCCCGGGTTGGGCCEEEECCCBT
T ss_pred             -----CCCcccCcCC-------CCCEEEEEEECCCCCCCCC--CCCcEEEEEecCCceeeeccCCCcccccccccHhhcc
Confidence                 2578999643       2567999999999986654  56666665555444433              2244 3


Q ss_pred             CCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccceeeeEEEEEeeccCcccc
Q 042831          189 SGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLEM  265 (645)
Q Consensus       189 ~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~wsf~~~~~~  265 (645)
                      .|+.++|||+||+.  +|+|++++.+.. +..++  ..++ ...||+++||||||+||...+.|+|++|+|.+...+
T Consensus       161 ~g~~~~v~I~Y~~~--~L~V~l~~~~~~-~~~~~--~~~~-~v~Lp~~~yvGfSAaTG~~~~~h~Ilswsf~sl~~~  231 (253)
T 2dur_A          161 RDHDTFLAVRYSRG--RLTVMTDLEDKN-EWKNC--IDIT-GVRLPTGYYFGASAGTGDLSDNHDIISMKLFQLMVE  231 (253)
T ss_dssp             CSSCEEEEEEEETT--EEEEEEECSSSS-CCEEE--EEEC-CEECCSSBEEEEEEEESSSCCEEEEEEEEEEECCCC
T ss_pred             CCCCeEEEEEEECC--EEEEEEeCCCCC-CceEE--EEeC-CcccCCCcEEEEEeccCCCcceEEEEEEEEEecccC
Confidence            48899999999975  899999975542 32333  3445 345899999999999999999999999999765443

>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A

Probab=100.00  E-value=6.5e-34  Score=285.89  Aligned_cols=205  Identities=19%  Similarity=0.174  Sum_probs=160.1

Q ss_pred             eeeEEeCCCCCC--CCCCeEEe-ecccCCCCcEecCC-CCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCC
Q 042831           34 ALTFNYTSFSPQ--YDDNITYE-RAYPDSNRVIQLPA-NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSY  109 (645)
Q Consensus        34 ~~~f~f~~f~~~--~~~~~~~~-~a~~~~~~~~~Lt~-~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~  109 (645)
                      ..||..+....+  ...++.++ ||.+ ++|.|+||+ ..++.||+||+.|++        ++||+|+|+|.|.+++ ..
T Consensus        33 ~~Sf~~P~~~~~~~~i~~w~~~G~a~i-~~~~IrLT~~~~~~~G~~w~~~p~~--------~~sF~t~F~F~I~~~~-~~  102 (260)
T 1gv9_A           33 KYSFKGPHLVQSDGTVPFWAHAGNAIP-SADQIRIAPSLKSQRGSVWTKTKAA--------FENWEVEVTFRVTGRG-RI  102 (260)
T ss_dssp             GGCEECSSCSCTTSCBTTEEEEETCEE-CSSCEEEECSSTTCEEEEEESSCBC--------CSSEEEEEEEEEECSS-SC
T ss_pred             ceeEcCccccCCCCccCCeEEcccEEe-eCCEEEeCCCCCCCEEEEEECCCcc--------ccCEEEEEEEEEecCC-CC
Confidence            345555554422  24589999 9988 789999999 667999999999995        4899999999999864 36


Q ss_pred             CCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCC---CC------CCCceeeecCC-Ccccc
Q 042831          110 YADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSW---DP------TFSHVGIDINS-VKSKK  179 (645)
Q Consensus       110 ~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~---d~------~~~hvgidvns-~~s~~  179 (645)
                      +||||||+|+|....     .|++||+.+       .++.||||||||.|.+   +|      |++|+|||+|+ +.|..
T Consensus       103 ~gdGlAF~l~~~~~~-----~g~~~G~~~-------~~~gvaVefDT~~N~~~~~~p~I~~~indg~~~~d~~~d~~s~~  170 (260)
T 1gv9_A          103 GADGLAIWYTENQGL-----DGPVFGSAD-------MWNGVGIFFDSFDNDGKKNNPAIVVVGNNGQINYDHQNDGATQA  170 (260)
T ss_dssp             CCCEEEEEEESSCCC-----EEEETTECS-------CCEEEEEEEECCCC-----CCEEEEEEEESCCCCCHHHHHHHHC
T ss_pred             CCCeEEEEEecCCCC-----CCCccCCCC-------CCCEEEEEEECCCCCCCCCCCceEEEeCCCceEeecCCCcccce
Confidence            799999999998642     578889742       3457999999999874   34      46788888886 66666


Q ss_pred             eeeecccCC-CCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccceeeeEEEEEee
Q 042831          180 NVSWWSDVK-SGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWE  258 (645)
Q Consensus       180 ~~~~~~~~~-~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~ws  258 (645)
                      ...|..++. +|+.++|||+|++.  +|+|++.+........+.+++.+| +..||+++||||||+||...+.|+|++|+
T Consensus       171 ~~~c~~~~~n~g~~~~~~I~Y~~~--~L~V~l~~~~~~~~~~~~~~~~vd-~~~LP~~~~vGfSAaTG~~~e~hdIlsw~  247 (260)
T 1gv9_A          171 LASCQRDFRNKPYPVRAKITYYQK--TLTVMINNGFTPDKNDYEFCAKVE-NMVIPTQGHFGISAATGGLADDHDVLSFL  247 (260)
T ss_dssp             SEEECCCCBSCSSCEEEEEEEETT--EEEEEEECSSCCCTTCCEEEEEET-TCCCCSSBEEEEEEECCSSCCEEEEEEEE
T ss_pred             eeccChhhccCCCcEEEEEEEECC--EEEEEEeeccCCCCCcceEEEEEc-ccccCCCcEEEEEEeCCCCcceEEEEEEE
Confidence            666655554 59999999999986  899999863211122357888999 67899999999999999999999999999


Q ss_pred             ccCcc
Q 042831          259 FNSSL  263 (645)
Q Consensus       259 f~~~~  263 (645)
                      |....
T Consensus       248 ~~~l~  252 (260)
T 1gv9_A          248 TFQLT  252 (260)
T ss_dssp             EEEEE
T ss_pred             EEEee
Confidence            97543

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ...

Probab=99.98  E-value=1.2e-32  Score=270.22  Aligned_cols=115  Identities=40%  Similarity=0.636  Sum_probs=106.5

Q ss_pred             CCCEEEEEEecccCC-C-CCCCCceeeecCCCcccceeeecccCCCCceeEEEEEEcCCCceEEEEEecCCCccccccee
Q 042831          146 SIPFVAVEFDVYVNS-W-DPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGL  223 (645)
Q Consensus       146 ~~~~vaVEfDt~~n~-~-d~~~~hvgidvns~~s~~~~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~l  223 (645)
                      +||+|||||||++|. | ||++|||||||||+.|.+++.|+  +.+|+.++|||+||+.+++|+|+|++.+.   ..|+|
T Consensus         1 ~n~~vAVEFDT~~n~~~~Dp~~nHVGIdvNs~~S~~~~~~~--l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~l   75 (237)
T 1nls_A            1 ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWN--MQNGKVGTAHIIYNSVDKRLSAVVSYPNA---DSATV   75 (237)
T ss_dssp             CCCEEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEECC--CCTTCEEEEEEEEETTTTEEEEEEECTTS---CCEEE
T ss_pred             CCCEEEEEEeCCCCcccCCCCCCeeeEecCCcccccccccc--ccCCCEEEEEEEEeCCCCEEEEEEecCCC---CcceE
Confidence            378999999999997 6 99999999999999999999984  78999999999999999999999997654   47899


Q ss_pred             eEeeccCcCCCCceEEEEeecccceeeeEEEEEeeccCcccc
Q 042831          224 DYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLEM  265 (645)
Q Consensus       224 s~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~wsf~~~~~~  265 (645)
                      ++.|||+++|+|+|||||||+||...|.|+|++|+|++.+..
T Consensus        76 s~~vdLs~~l~e~~~VGFSAsTG~~~~~h~IlsWsF~s~~~a  117 (237)
T 1nls_A           76 SYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLKS  117 (237)
T ss_dssp             EEECCGGGTSCSEEEEEEEEECSSSCCCCEEEEEEEEEEEEE
T ss_pred             EEeeChHHhCccccEEEEEeccCCcceeeeeEEEEEEecccc
Confidence            999999999999999999999999999999999999887653

>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1

Probab=99.95  E-value=2.2e-28  Score=211.57  Aligned_cols=103  Identities=35%  Similarity=0.683  Sum_probs=91.8

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CC------CceEEEEeCCceecccCCCCCccceeEEEEEEEee
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NR------ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDS  104 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~------~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~  104 (645)
                      .+++|+|++|.++ ..+|.++ ||.+.+ |.|+||+ +.      .++|||+|++||||||+ +|+++||+|+|+|.|.+
T Consensus         2 ~~~~F~f~~F~~~-~~nl~l~G~A~v~~-g~l~LT~~~~~g~~~~~s~Gra~Y~~Pv~l~d~-tg~vaSFsT~F~F~I~~   78 (113)
T 1qmo_A            2 QSLSFSFTKFDPN-QEDLIFQGHATSTN-NVLQVTKLDSAGNPVSSSAGRVLYSAPLRLWED-SAVLTSFDTIINFEIST   78 (113)
T ss_dssp             EEEEEEESSCCSS-CTTEEEEETCEEET-TEEECSCBCTTSCBCSSCEEEEEESSCEECCCT-TEEEEEEEEEEEEEEEC
T ss_pred             cceEEEcCCCCCC-CCCeEEecceEcCC-CceEeCCCCCCCcccCCcEEEEEeCCCEEeeCC-CCCEEeeEEEEEEEEec
Confidence            4689999999965 5689999 999965 9999999 43      58999999999999999 99999999999999998


Q ss_pred             CCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCC
Q 042831          105 RNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDN  140 (645)
Q Consensus       105 ~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~  140 (645)
                      .....+||||||||+|..+. |. +.||||||+|.+
T Consensus        79 ~~~~~~gdGlAF~lap~~~~-p~-s~g~~LGL~n~~  112 (113)
T 1qmo_A           79 PYTSRIADGLAFFIAPPDSV-IS-YHGGFLGLFPNA  112 (113)
T ss_dssp             SSSSCCCCEEEEEEECTTCC-CC-CCGGGTTTCSSC
T ss_pred             CCCCCCCCeEEEEecCCCCC-CC-CCccccccccCC
Confidence            87777899999999999865 76 899999999864

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.95  E-value=5.2e-29  Score=279.77  Aligned_cols=186  Identities=19%  Similarity=0.105  Sum_probs=132.9

Q ss_pred             ccCcCCcEEEEEEEEcCCCeEEEEEEeccC----------ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEE
Q 042831          359 KLGQGGFGGVYKGFFRETNSYIAVKRVSQG----------SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       359 ~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~----------~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ..+.|+.|.+..++....|+.+++|.+...          .....++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            466777777777776667888999998653          123456799999999999 699999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      |||++|++|.+++.+. ..++..   +|+.||+.||.|||+   ++||||||||+|||+++++++||+|||+|+......
T Consensus       321 MEyv~G~~L~d~i~~~-~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~  393 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAG-EEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC  393 (569)
T ss_dssp             EECCCSEEHHHHHHTT-CCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred             EecCCCCcHHHHHHhC-CCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence            9999999999999654 456654   589999999999999   999999999999999999999999999998664322


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCC
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP  553 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~p  553 (645)
                       ......+||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus       394 -~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          394 -SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             -ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence             23345679999999998865 567789999999998887665443

>2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13

Probab=99.92  E-value=1.4e-24  Score=216.90  Aligned_cols=187  Identities=16%  Similarity=0.212  Sum_probs=147.0

Q ss_pred             CCCeEEe-ecccCCCCcEecCCCCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCCCCeEEEEEccCCCCC
Q 042831           47 DDNITYE-RAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKI  125 (645)
Q Consensus        47 ~~~~~~~-~a~~~~~~~~~Lt~~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~GlaF~l~p~~~~~  125 (645)
                      ..++.++ +|.+ .++.|+||+..++.|++|.+.|+++       .++|+|+|+|.|.... ..+||||||+++|.... 
T Consensus        30 i~~w~~~G~a~v-~~~~IrLTp~~~s~G~iW~~~p~~~-------~~~f~~~f~FrI~g~~-~~~gdGlAfwlt~~~~~-   99 (256)
T 2a6y_A           30 PNNWQTGEQASL-EEGRIVLTSNQNSKGSLWLKQGFDL-------KDSFTMEWTFRSVGYS-GQTDGGISFWFVQDSNI-   99 (256)
T ss_dssp             CTTEEEEETCEE-ETBEEECCCSTTCEEEEEESSCEEE-------SSCEEEEEEEEEESCC-SCCSCEEEEEEEECSSS-
T ss_pred             cCCeEEccceEE-eCCEEEECCCCCceEEEeeCCCCcc-------cCCEEEEEEEEEecCC-CCCCCeEEEEEeCCCCc-
Confidence            5589999 9999 7899999996567999777777764       4789999999999764 33799999999997642 


Q ss_pred             CCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCC------CCceeeecCCCcccceeeecccCC-CCceeEEEEE
Q 042831          126 PTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPT------FSHVGIDINSVKSKKNVSWWSDVK-SGRRNEAWIS  198 (645)
Q Consensus       126 ~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~------~~hvgidvns~~s~~~~~~~~~~~-~g~~~~~~I~  198 (645)
                      |  ..|+.+|..+.       ..-+||||||+.|. .|.      +.|+++|.+++.+.....|..++. +|..++|||+
T Consensus       100 ~--~~g~~~G~~~~-------f~GlaV~fDT~~n~-~p~i~~~~Ndg~~~~d~~~~~~~~~~~c~~~~rn~~~~~~v~I~  169 (256)
T 2a6y_A          100 P--RDKQLYNGPVN-------YDGLQLLVDNNGPL-GPTLRGQLNDGQKPVDKTKIYDQSFASCLMGYQDSSVPSTIRVT  169 (256)
T ss_dssp             C--CCCTBTTBCTT-------CEEEEEEEESCSTT-CSEEEEEEEESSSCCCGGGHHHHCSEEEECCCTTCSSCEEEEEE
T ss_pred             c--cCCcccCcCCC-------CCEEEEEEECCCCC-CceEEEEECCCceecccCCCcccceecceeecccCCCcEEEEEE
Confidence            2  56778887742       22489999999873 343      679999998866666677754454 7899999999


Q ss_pred             Ec-CCCceEEEEEecCCCcccccceeeEeeccCcC-CCCce-EEEEeeccc---ceeeeEEEEEeeccCccc
Q 042831          199 YN-SSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQH-LPEFV-TFGFSMATG---VDFAIFSIYSWEFNSSLE  264 (645)
Q Consensus       199 Y~-~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~-l~~~~-~vGfsastg---~~~~~~~i~~wsf~~~~~  264 (645)
                      |+ +..+.|+|.+.+       ..    -+++..+ ||+++ ++||||+||   ...+.|.|++|+|.....
T Consensus       170 Y~~~~~~~L~V~i~~-------~~----c~~~~~v~LP~~~~~~GfSAaTG~~~~~~d~hdIls~~~~~~~~  230 (256)
T 2a6y_A          170 YDLEDDNLLKVQVDN-------KV----CFQTRKVRFPSGSYRIGVTAQNGAVNNNAESFEIFKMQFFNGVI  230 (256)
T ss_dssp             EEGGGTSEEEEEETT-------EE----EEEESCEECCSEEEEEEEEEECCSGGGCCCEEEEEEEEEEESCS
T ss_pred             EecCCCcEEEEEEcC-------EE----EEEECcEEeCCCCeEEEEEEeCCCCCCCcceEEEEEEEEEeccc
Confidence            99 888999999976       11    1223334 78887 699999999   889999999999987554

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.92  E-value=8.3e-26  Score=252.33  Aligned_cols=185  Identities=12%  Similarity=0.137  Sum_probs=146.3

Q ss_pred             CCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--------hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          355 NDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--------KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       355 ~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--------~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ...++||+|+||.||+|...  +..+++|+.....        ....+++.+|++++++++||||+++..++...+..+|
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l  416 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYL--DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI  416 (540)
T ss_dssp             ---------CCEEEEEEECS--SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred             CCCCEEeeCCCEEEEEEEEC--CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence            44678999999999999544  6789999864321        1124568999999999999999977777777788899


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++++|.+++.+         +..++.|+++||.|||+   ++|+||||||+|||++.  ++||+|||+++.....
T Consensus       417 VmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~  482 (540)
T 3en9_A          417 MMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD  482 (540)
T ss_dssp             EEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred             EEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence            9999999999999854         56899999999999998   89999999999999999  9999999999876543


Q ss_pred             CCcc------eeecccCccccCcccccc--CCCCcchhHHHHHHHHHHHHcCCCCCC
Q 042831          507 KGSQ------TTVLAGTMGYMAPECATT--GKASKESDVYSFGIVALEIACGRKPIN  555 (645)
Q Consensus       507 ~~~~------~~~~~gt~~y~aPE~~~~--~~~t~~sDV~SfGvll~elltG~~pf~  555 (645)
                      ....      .....||+.|+|||++..  ..|+...|+|+..+-.++-+.++.+|.
T Consensus       483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            2211      235679999999999977  567888999999999988888877663

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ...

Probab=99.91  E-value=7.2e-25  Score=214.99  Aligned_cols=106  Identities=28%  Similarity=0.578  Sum_probs=94.1

Q ss_pred             CceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CC------CceEEEEeCCceecccCCCCCccceeEEEEEEEe
Q 042831           32 ASALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NR------ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVID  103 (645)
Q Consensus        32 ~~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~------~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~  103 (645)
                      +..++|+|++|.++ ..+|.++ ||.+.++|.|+||+ +.      .+.|||+|++||||||+ +|+++||+|+|+|.|.
T Consensus       123 s~~~~F~~~~F~~~-~~nl~l~G~A~v~~~g~l~LT~~~~n~~~~~~~~Gra~Y~~Pv~lwd~-~~~vaSFsT~F~F~I~  200 (237)
T 1nls_A          123 TNALHFMFNQFSKD-QKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWES-SAVVASFEATFTFLIK  200 (237)
T ss_dssp             EEEEEEEESCCCTT-CTTEEEEETCEEEETTEEESSCBCTTSCBCSSCEEEEEESSCEECCCT-TEEEEEEEEEEEEECC
T ss_pred             cccchhhhcccccc-CCCeEEccceEecCCCceEecCCccCCccccCceEEEEeCCCEEeecC-CCCEeeeEEEEEEEEe
Confidence            35679999999975 5689999 99997789999999 42      57999999999999997 8899999999999999


Q ss_pred             eCCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCC
Q 042831          104 SRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDN  140 (645)
Q Consensus       104 ~~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~  140 (645)
                      +.. ..+||||||||+|..+++|.++.||||||+|.+
T Consensus       201 ~~~-~~~g~GlAF~lap~~~~~p~~~~g~~LGL~n~~  236 (237)
T 1nls_A          201 SPD-SHPADGIAFFISNIDSSIPSGSTGRLLGLFPDA  236 (237)
T ss_dssp             CSS-SSCCCEEEEEEECTTCCCCTTCCGGGTTTCSSC
T ss_pred             cCC-CCCCccEEEEECCCCCCCCCCCCcCeeccccCC
Confidence            863 457999999999998788999999999999864

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.87  E-value=8.9e-23  Score=209.13  Aligned_cols=152  Identities=14%  Similarity=0.103  Sum_probs=121.3

Q ss_pred             HHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh------------------hhHHHHHHHHHHHHhc
Q 042831          345 KELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK------------------QGIKEYASEVKIISRL  406 (645)
Q Consensus       345 ~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~------------------~~~~~~~~Ei~~l~~l  406 (645)
                      ..+......|...+.||+|+||.||+|.+ .+|+.||+|.++....                  .....+.+|++++.++
T Consensus        83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l  161 (282)
T 1zar_A           83 HRLVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL  161 (282)
T ss_dssp             HHHHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence            34444555677779999999999999999 7799999999864321                  1356789999999999


Q ss_pred             CCCCccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE
Q 042831          407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML  486 (645)
Q Consensus       407 ~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl  486 (645)
                      +  | +++.+++.. +..++||||+++++|.+ +..       .....++.|++.||.|||+   .+|+||||||+|||+
T Consensus       162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl  226 (282)
T 1zar_A          162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLV  226 (282)
T ss_dssp             T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEE
T ss_pred             c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEE
Confidence            9  4 555554433 55699999999999988 421       2244799999999999998   999999999999999


Q ss_pred             CCCCcEEEeeccCcccccccCCcceeecccCccccCccccc
Q 042831          487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT  527 (645)
Q Consensus       487 d~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~  527 (645)
                      + ++.+||+|||+++.              +..++|||++.
T Consensus       227 ~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~  252 (282)
T 1zar_A          227 S-EEGIWIIDFPQSVE--------------VGEEGWREILE  252 (282)
T ss_dssp             E-TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred             E-CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence            9 99999999999963              33478888764

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.77  E-value=2.1e-19  Score=181.54  Aligned_cols=138  Identities=19%  Similarity=0.091  Sum_probs=107.3

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeE--EEEEEeccCCh------------------------hhHHHHHHHHHHHHhc
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSY--IAVKRVSQGSK------------------------QGIKEYASEVKIISRL  406 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~--vavK~~~~~~~------------------------~~~~~~~~Ei~~l~~l  406 (645)
                      -|...+.||+|+||.||+|.+..+|+.  ||||.++....                        .....+.+|+..+.++
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            356778999999999999999667888  99998754311                        1123678999999999


Q ss_pred             CCCCc--cEEEeeeeeCCeEEEEEEecCC-C----ChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHH-hhcCCCeeecc
Q 042831          407 RHRNL--VQLLGWCHEKKELLLVYEFMPN-G----SLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ-EEWEQCVVHRD  478 (645)
Q Consensus       407 ~H~nl--v~l~~~~~~~~~~~lV~Ey~~~-g----sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH~D  478 (645)
                      +|+++  ..++++    +..+|||||+.+ |    +|.+....    .++.....++.|++.+|.||| +   .+|+|||
T Consensus       128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~---~givHrD  196 (258)
T 1zth_A          128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQE---AELVHAD  196 (258)
T ss_dssp             HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHT---SCEECSS
T ss_pred             HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHH---CCEEeCC
Confidence            88754  444432    356899999942 4    55554422    234567789999999999999 7   8999999


Q ss_pred             CCCCCeEECCCCcEEEeeccCcccc
Q 042831          479 IKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       479 lkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      |||+|||++.  .++|+|||++...
T Consensus       197 lkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          197 LSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             CSTTSEEESS--SEEECCCTTCEET
T ss_pred             CCHHHEEEcC--cEEEEECcccccC
Confidence            9999999998  9999999999754

>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A

Probab=99.71  E-value=2e-16  Score=154.42  Aligned_cols=180  Identities=15%  Similarity=0.185  Sum_probs=126.2

Q ss_pred             CCCeEEe-ecccCCCCcEecCCCCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCCCCeEEEEEccCCCCC
Q 042831           47 DDNITYE-RAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKI  125 (645)
Q Consensus        47 ~~~~~~~-~a~~~~~~~~~Lt~~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~GlaF~l~p~~~~~  125 (645)
                      .....+. +|.+ .++.|+||...++.|.+|.+.|+++.       .+|+++|+|.|..+. ..+||||||++++.... 
T Consensus        23 ~~~W~~~G~a~i-~~~~IrLTp~~~~~G~iWs~~p~~~~-------~~weie~~Fri~g~~-~~~gdGlA~W~t~~~~~-   92 (222)
T 2a6z_A           23 PNNWQTGEQASL-EEGRIVLTSNQNSKGSLWLKQGFDLK-------DSFTMEWTFRSVGYS-GQTDGGISFWFVQDSNI-   92 (222)
T ss_dssp             CTTEEEEETCEE-ETTEEESCCSTTCEEEEEESSCEECC-------SCEEEEEEEEEESCC-SCCSCEEEEEEEECSSS-
T ss_pred             cCCcEEcccEEE-cCCEEEECCCCCCeEEEEeCCCCCCC-------CCEEEEEEEEEeCCC-CCCCCEEEEEEECCCcc-
Confidence            4578888 8888 67999999965679999999999863       369999999998764 34699999999987531 


Q ss_pred             CCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCc---------ccceeeecccCC-CCceeEE
Q 042831          126 PTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVK---------SKKNVSWWSDVK-SGRRNEA  195 (645)
Q Consensus       126 ~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~---------s~~~~~~~~~~~-~g~~~~~  195 (645)
                        ...|..+|..+.-+ |      +||+|||+.|.    .++|.+.+|.-.         +..-..+..... .+...++
T Consensus        93 --~~~g~~~G~~~~f~-G------L~I~~Dt~~n~----~p~i~~~~ndG~~~yd~~~~~~~~~~~C~~~~rn~~~~~~~  159 (222)
T 2a6z_A           93 --PRDKQLYNGPVNYD-G------LQLLVDNNGPL----GPTLRGQLNDGQKPVDKTKIYDQSFASCLMGYQDSSVPSTI  159 (222)
T ss_dssp             --CCCCTBTTBCTTCE-E------EEEEEESCSTT----SSEEEEEEEESSSCCCGGGHHHHCSEEEECCCTTEEEEEEE
T ss_pred             --cCCCcccCCCCCCC-E------EEEEEECCCCC----CceEEEEECCCCeeeccCCCccccccccceeccCCCCcEEE
Confidence              13455555433211 1      79999999873    345555554321         111122322333 5788999


Q ss_pred             EEEEc-CCCceEEEEEecCCCcccccceee-EeeccCcCCCCc-eEEEEeeccc---ceeeeEEEEEeecc
Q 042831          196 WISYN-SSTHNLSVAFTGFRNNLVVMQGLD-YQVDLRQHLPEF-VTFGFSMATG---VDFAIFSIYSWEFN  260 (645)
Q Consensus       196 ~I~Y~-~~~~~l~v~l~~~~~~~~~~~~ls-~~vdl~~~l~~~-~~vGfsastg---~~~~~~~i~~wsf~  260 (645)
                      +|+|+ ...+.|+|.+..       ..++. ..|+    ||+. .|+||||+||   +..+.|.|++|++.
T Consensus       160 rI~Y~~~~~~~l~v~id~-------~~C~~~~~v~----LP~~~~y~G~SA~TG~l~~~~d~hdil~~~~~  219 (222)
T 2a6z_A          160 RVTYDLEDDNLLKVQVDN-------KVCFQTRKVR----FPSGSYRIGVTAQNGAVNNNAESFEIFKMQFF  219 (222)
T ss_dssp             EEEEEGGGTSEEEEEETT-------EEEEEESCCC----CCSSEEEEEEEEECCSGGGCCCEEEEEEEEEE
T ss_pred             EEEEEcCCCcEEEEEEcC-------eEEEEeCCee----cCCCCcEEEEEEcCCCCCCCCccEEEEEEEEE
Confidence            99999 667889999865       11222 1233    4555 4799999999   88899999999874

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.59  E-value=4.4e-16  Score=164.27  Aligned_cols=144  Identities=13%  Similarity=0.093  Sum_probs=101.1

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh--------------hhHHH--------HHHHHHHHHhc
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK--------------QGIKE--------YASEVKIISRL  406 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~Ei~~l~~l  406 (645)
                      ....-|.+.++||+|++|.||+|... +|+.||||+++....              .....        ...|...|.++
T Consensus        92 ~rg~iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL  170 (397)
T 4gyi_A           92 ARKDVYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL  170 (397)
T ss_dssp             HTTSCSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HCCCEEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence            33344889999999999999999985 488999998753210              00111        23456666666


Q ss_pred             CCCCccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE
Q 042831          407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML  486 (645)
Q Consensus       407 ~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl  486 (645)
                      .+.++....-+...  ..+|||||+++++|..+...       +....++.||+.+|.|||+   .+||||||||.|||+
T Consensus       171 ~~~gv~vp~p~~~~--~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl  238 (397)
T 4gyi_A          171 YEEGFPVPEPIAQS--RHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLAK---HGLIHGDFNEFNILI  238 (397)
T ss_dssp             HHTTCSCCCEEEEE--TTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEE
T ss_pred             HhcCCCCCeeeecc--CceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEE
Confidence            54443211111111  23799999999888665421       1235688999999999998   899999999999999


Q ss_pred             CCCC----------cEEEeeccCcccccc
Q 042831          487 DSNF----------NAKIGDFGLARLVEH  505 (645)
Q Consensus       487 d~~~----------~~kl~DfGla~~~~~  505 (645)
                      ++++          .+.|+||+.+....+
T Consensus       239 ~~dgd~~d~~~~~~~~~iID~~Q~V~~~h  267 (397)
T 4gyi_A          239 REEKDAEDPSSITLTPIIIXFPQMVSMDH  267 (397)
T ss_dssp             EEEECSSCTTSEEEEEEECCCTTCEETTS
T ss_pred             eCCCCcccccccccceEEEEeCCcccCCC
Confidence            8776          389999998865543

>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B

Probab=99.36  E-value=2.4e-13  Score=99.16  Aligned_cols=45  Identities=38%  Similarity=0.705  Sum_probs=42.0

Q ss_pred             cceeeEeeccCcCCCCceEEEEeecccceeeeEEEEEeeccCccc
Q 042831          220 MQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLE  264 (645)
Q Consensus       220 ~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~wsf~~~~~  264 (645)
                      +|+|++.+||+++|+|+|+|||||+||...+.|+|++|+|++.+.
T Consensus         3 ~p~ls~~vdLs~~l~e~v~VGFSAsTG~~~~~h~IlsWsF~s~~~   47 (52)
T 2ltn_B            3 SYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSELS   47 (52)
T ss_dssp             EEEEEEECCHHHHSCSEEEEEEEEECCSSCCEEEEEEEEEEEEEC
T ss_pred             eeeEEEEEcHHHhcCceEEEEEEeccCCcceeEEEEEeEEEeecc
Confidence            578999999999999999999999999999999999999987653

>2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A

Probab=99.25  E-value=2.7e-10  Score=110.64  Aligned_cols=174  Identities=17%  Similarity=0.140  Sum_probs=117.0

Q ss_pred             CCeEEe-ecccCCCCcEecCCCCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCCCCeEEEEEccCCCCCC
Q 042831           48 DNITYE-RAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIP  126 (645)
Q Consensus        48 ~~~~~~-~a~~~~~~~~~Lt~~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~GlaF~l~p~~~~~~  126 (645)
                      ....+. +|.+ .++.|+||..+++.|.+|-+.|+.+-       .+|+.+|.|.|...... +||||||.++.....  
T Consensus        27 ~~W~~~G~t~v-~~~~IrLTp~~s~~G~lWs~~p~~~~-------~~weiev~Fri~G~~~~-~gdGlA~Wyt~~~~~--   95 (226)
T 2a6v_A           27 SQWTLGDKVKL-EEGRFVLTPGKNTKGSLWLKPEYSIK-------DAMTIEWTFRSFGFRGS-TKGGLAFWLKQGNEG--   95 (226)
T ss_dssp             TTEEEEETCEE-ETTEEESCCSTTCEEEEEESSCBCCS-------SCEEEEEEEEEESCCSC-CSCEEEEEEECSCCC--
T ss_pred             CCcEEcCCeEE-eCCEEEECCCCCceEEEeeCCCCCCC-------CCeEEEEEEEEecCCCC-CCCEEEEEEECCCCC--
Confidence            467788 8888 46689999986789999999999861       35999999999977533 699999999976531  


Q ss_pred             CCCCCCccc----CccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCC-c------ccceeeecccC-CCCceeE
Q 042831          127 TNKGGGSFG----LTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSV-K------SKKNVSWWSDV-KSGRRNE  194 (645)
Q Consensus       127 ~~~~g~~lG----l~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~-~------s~~~~~~~~~~-~~g~~~~  194 (645)
                        ..|..+|    -|+.          +||.|||+.|.    ...|-+-+|.- .      +..-..+..++ ..+...+
T Consensus        96 --~~g~vfGg~~d~f~G----------lgI~~Dt~~n~----~p~i~~~~NDGt~~yd~~~~~~~g~C~~~~rn~~~~t~  159 (226)
T 2a6v_A           96 --DSTELFGGSSKKFNG----------LMILLRLDDKL----GESVTAYLNDGTKDLDIESSPYFASCLFQYQDSMVPST  159 (226)
T ss_dssp             --CCCTBTTTBCSSCEE----------EEEEEEEETTT----EEEEEEEEEESSSCCCTTTSCCSEEEECCCSSCSSCEE
T ss_pred             --CCcccccccCCCccE----------EEEEEECCCCC----CceEEEEECCCCcccCCCCCcccceEeEeccCCCCCEE
Confidence              2233332    2221          89999999862    12344433321 1      11112232233 3567899


Q ss_pred             EEEEEc-CCCceEEEEEecCCCcccccceeeE-eeccCcCCCCc--eEEEEeecccceeeeEEEEEeec
Q 042831          195 AWISYN-SSTHNLSVAFTGFRNNLVVMQGLDY-QVDLRQHLPEF--VTFGFSMATGVDFAIFSIYSWEF  259 (645)
Q Consensus       195 ~~I~Y~-~~~~~l~v~l~~~~~~~~~~~~ls~-~vdl~~~l~~~--~~vGfsastg~~~~~~~i~~wsf  259 (645)
                      ++|.|+ ...+.|+|.+..       ..++.. .|+    ||..  .|+||||+||+..+.|.|++-..
T Consensus       160 ~ri~Y~~~~~~~l~v~id~-------~~Cf~~~~v~----LP~g~~~yfGiSAaTg~~~D~hdils~~~  217 (226)
T 2a6v_A          160 LRLTYNPLDNHLLKLQMDN-------RVCFQTRKVK----FMGSSPFRIGTSAINDASKESFEILKMKL  217 (226)
T ss_dssp             EEEEEEGGGTSEEEEEETT-------EEEEEESCCC----GGGTSCBEEEEEEECCTTCCEEEEEEEEE
T ss_pred             EEEEEEccCCCEEEEEEcC-------CeeEEECCee----cCCCCccEEEEEEcCCCCcccEEEEEEEE
Confidence            999997 456789998863       123321 123    3433  49999999999999999987654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.23  E-value=2.5e-11  Score=122.16  Aligned_cols=146  Identities=14%  Similarity=0.035  Sum_probs=113.7

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeEEE
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~~l  426 (645)
                      .....+|.....++.|+.+.||+....  ++.+++|............+.+|+++++.+. +..+.++++++...+..++
T Consensus        10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l   87 (263)
T 3tm0_A           10 KKLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HHHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             HHHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence            344457877788888889999999754  5789999986532222346888999999985 6778899999999899999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhh-------------------------------------
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE-------------------------------------  469 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------------------------------------  469 (645)
                      ||||++|.+|.+.+.      +......++.+++++|..||+.                                     
T Consensus        88 v~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (263)
T 3tm0_A           88 LMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED  161 (263)
T ss_dssp             EEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred             EEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence            999999999877531      1122447889999999999981                                     


Q ss_pred             -------------------cCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          470 -------------------WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       470 -------------------~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                                         ....++|+|+++.|||++++..+.|.||+.+.
T Consensus       162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                               01459999999999999876666799999874

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.05  E-value=3.7e-10  Score=112.87  Aligned_cols=137  Identities=18%  Similarity=0.111  Sum_probs=99.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCC--ccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN--LVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--lv~l~~~~~~~~~~~lV~E  429 (645)
                      .++......+.|..+.||++.. .+|..+++|.....   ....+.+|+.++..+++.+  +.+++++...++..++|||
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e   95 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG   95 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred             CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence            3444333334555699999965 34677999987544   2245778999999986544  4568888888888999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhc---------------------------------------
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW---------------------------------------  470 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------------  470 (645)
                      |+++.+|.  ...    .+   ...++.++++.|..||+..                                       
T Consensus        96 ~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (264)
T 1nd4_A           96 EVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA  166 (264)
T ss_dssp             CCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred             ecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence            99998884  211    11   2367788888888888631                                       


Q ss_pred             ----------------CCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          471 ----------------EQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       471 ----------------~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                                      ...++|+|++|.||+++++..+.|.||+.+.
T Consensus       167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                            1239999999999999887667799999875

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.93  E-value=3.2e-09  Score=111.87  Aligned_cols=142  Identities=13%  Similarity=0.182  Sum_probs=107.6

Q ss_pred             CCCccCcCCcEEEEEEEEcCCCeEEEEEEec--cCC-hhhHHHHHHHHHHHHhcC--CCCccEEEeeeeeC---CeEEEE
Q 042831          356 DDQKLGQGGFGGVYKGFFRETNSYIAVKRVS--QGS-KQGIKEYASEVKIISRLR--HRNLVQLLGWCHEK---KELLLV  427 (645)
Q Consensus       356 ~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~--~~~-~~~~~~~~~Ei~~l~~l~--H~nlv~l~~~~~~~---~~~~lV  427 (645)
                      ..+.|+.|.++.||+....  +..+++|+..  ... ......+.+|+.+++.++  +..+.+++.++.+.   +..++|
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v  119 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI  119 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence            3567899999999998765  3568888765  322 123457788999999997  45678899998776   458999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhc-------------------------------------
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW-------------------------------------  470 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------  470 (645)
                      |||+++..+.+..   ...++...+..++.++++.|..||...                                     
T Consensus       120 me~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (359)
T 3dxp_A          120 MEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA  196 (359)
T ss_dssp             EECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred             EEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence            9999998875422   124678889999999999999999720                                     


Q ss_pred             ------------------CCCeeeccCCCCCeEECCCCc--EEEeeccCccc
Q 042831          471 ------------------EQCVVHRDIKSSNIMLDSNFN--AKIGDFGLARL  502 (645)
Q Consensus       471 ------------------~~~ivH~Dlkp~NILld~~~~--~kl~DfGla~~  502 (645)
                                        ...++|+|+++.|||++.++.  +.|.||+.+..
T Consensus       197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                              257999999999999987653  68999999874

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.86  E-value=1.6e-09  Score=111.54  Aligned_cols=183  Identities=19%  Similarity=0.200  Sum_probs=123.5

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCC--ccEEEeeeeeCC---eEEEEEEe
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRN--LVQLLGWCHEKK---ELLLVYEF  430 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~n--lv~l~~~~~~~~---~~~lV~Ey  430 (645)
                      .+.++.|....||+..     ..+++|.....  .....+.+|++++..+. +..  +.+++......+   ..++|||+
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~   97 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK   97 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence            4568999999999863     34888876432  34567889999999884 332  445555544333   34889999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhh-----------------------------------------
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE-----------------------------------------  469 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----------------------------------------  469 (645)
                      ++|.+|.....   ..++.+++..++.++++.|..||..                                         
T Consensus        98 i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  174 (304)
T 3sg8_A           98 IKGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD  174 (304)
T ss_dssp             CCCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred             cCCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence            99988875432   2467788889999999999999961                                         


Q ss_pred             --------------cCCCeeeccCCCCCeEECC--CCcEEEeeccCcccccccCCcceeecccCccc---cCcccccc--
Q 042831          470 --------------WEQCVVHRDIKSSNIMLDS--NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGY---MAPECATT--  528 (645)
Q Consensus       470 --------------~~~~ivH~Dlkp~NILld~--~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y---~aPE~~~~--  528 (645)
                                    ....++|+|+++.||++++  ...+.|.||+.+...+....     ......+   ..|+....  
T Consensus       175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~D-----l~~~~~~~~~~~~~~~~~~l  249 (304)
T 3sg8_A          175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDND-----FISLMEDDEEYGMEFVSKIL  249 (304)
T ss_dssp             HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHH-----HHTTCCTTTSCCHHHHHHHH
T ss_pred             HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHH-----HHHHHhhccccCHHHHHHHH
Confidence                          0135899999999999988  55688999999865432110     0000011   12221110  


Q ss_pred             ---CCC---------CcchhHHHHHHHHHHHHcCCCCC
Q 042831          529 ---GKA---------SKESDVYSFGIVALEIACGRKPI  554 (645)
Q Consensus       529 ---~~~---------t~~sDV~SfGvll~elltG~~pf  554 (645)
                         +..         ..-.+.|+++.+++++.+|+.+|
T Consensus       250 ~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          250 NHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence               111         12268999999999999998765

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.29  E-value=2.4e-06  Score=85.77  Aligned_cols=136  Identities=16%  Similarity=0.133  Sum_probs=99.2

Q ss_pred             ccCcCCcE-EEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeEEEEEEecCCCCh
Q 042831          359 KLGQGGFG-GVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKELLLVYEFMPNGSL  436 (645)
Q Consensus       359 ~LG~G~fG-~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL  436 (645)
                      .+..|..| .||+.....++..+.+|+-...   ...++.+|...|+.+. +--+.++++++.+.+..++|||++++.++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence            34445555 6899887766778899986432   3456788999998885 33467889999999999999999999888


Q ss_pred             hhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhc----------------------------------------------
Q 042831          437 DSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW----------------------------------------------  470 (645)
Q Consensus       437 ~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------------------  470 (645)
                      .+.....     ......+..+++..|.-||...                                              
T Consensus       108 ~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (272)
T 4gkh_A          108 FQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE  182 (272)
T ss_dssp             HHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred             cccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence            7654321     1233456667777777777410                                              


Q ss_pred             ---------CCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          471 ---------EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       471 ---------~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                               ...++|+|+.+.|||+++++.+-|.||+.+..
T Consensus       183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                     11389999999999999877777999998753

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.25  E-value=6.6e-06  Score=84.44  Aligned_cols=137  Identities=19%  Similarity=0.189  Sum_probs=96.9

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCC---CccEEEeeee-eCCeEEEEEEecC
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHR---NLVQLLGWCH-EKKELLLVYEFMP  432 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~---nlv~l~~~~~-~~~~~~lV~Ey~~  432 (645)
                      .+.++.|....||+.     +..+++|...  .......+.+|.++|..+++.   .+.+.+.++. ..+..++||||++
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~   96 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ   96 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence            456788888999988     3457888753  233456788999999999753   3566777764 4456789999999


Q ss_pred             CCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhh-------------------------------------------
Q 042831          433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE-------------------------------------------  469 (645)
Q Consensus       433 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------------------------------------------  469 (645)
                      |.+|.....   ..++...+..++.++++.|..||+.                                           
T Consensus        97 G~~l~~~~~---~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~  173 (306)
T 3tdw_A           97 GQILGEDGM---AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT  173 (306)
T ss_dssp             SEECHHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred             CeECchhhh---hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence            988865321   1235555666666666666666642                                           


Q ss_pred             --------------cCCCeeeccCCCCCeEECC---CCc-EEEeeccCcccc
Q 042831          470 --------------WEQCVVHRDIKSSNIMLDS---NFN-AKIGDFGLARLV  503 (645)
Q Consensus       470 --------------~~~~ivH~Dlkp~NILld~---~~~-~kl~DfGla~~~  503 (645)
                                    ....++|+|+++.||+++.   ++. +.|.||+.+...
T Consensus       174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                          1235799999999999987   455 589999988653

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.06  E-value=6e-06  Score=86.50  Aligned_cols=82  Identities=4%  Similarity=-0.021  Sum_probs=56.3

Q ss_pred             CCcc-CcCCcEEEEEEEEc--C----CCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCC---CCccEEEeeeeeC--
Q 042831          357 DQKL-GQGGFGGVYKGFFR--E----TNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRH---RNLVQLLGWCHEK--  421 (645)
Q Consensus       357 ~~~L-G~G~fG~Vy~g~~~--~----~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H---~nlv~l~~~~~~~--  421 (645)
                      .+.| +.|....+|+....  .    ++..+++|......   ......+.+|+.++..++.   -.+.+++.++.+.  
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            3567 88889999998764  1    15678888764322   0012456788888888752   3567788887665  


Q ss_pred             -CeEEEEEEecCCCChhh
Q 042831          422 -KELLLVYEFMPNGSLDS  438 (645)
Q Consensus       422 -~~~~lV~Ey~~~gsL~~  438 (645)
                       +..++||||+++..+.+
T Consensus       105 ~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          105 LGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             TSSCEEEEECCCCBCCCB
T ss_pred             cCCceEEEEecCCCChhh
Confidence             35689999999877654

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.98  E-value=1.8e-05  Score=84.18  Aligned_cols=76  Identities=16%  Similarity=0.178  Sum_probs=49.7

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh-------hhHHHHHHHHHHHHhcCC--CC-ccEEEeeeeeCCeEEE
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK-------QGIKEYASEVKIISRLRH--RN-LVQLLGWCHEKKELLL  426 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~-------~~~~~~~~Ei~~l~~l~H--~n-lv~l~~~~~~~~~~~l  426 (645)
                      .+.||.|..+.||++....+++.++||......+       .....+..|.+++..+..  +. +.+++.+  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            4679999999999998765577899997643211       123456778888888742  33 4455544  3445689


Q ss_pred             EEEecCCC
Q 042831          427 VYEFMPNG  434 (645)
Q Consensus       427 V~Ey~~~g  434 (645)
                      ||||+++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999764

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.80  E-value=0.0002  Score=73.87  Aligned_cols=139  Identities=16%  Similarity=0.202  Sum_probs=80.4

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCC--CCccEEEe------eeeeCCeEEEEE
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH--RNLVQLLG------WCHEKKELLLVY  428 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H--~nlv~l~~------~~~~~~~~~lV~  428 (645)
                      .+.|+.|..+.||+....  +..+++|+.... .   .++..|..++..|..  -.+.+++.      +....+..+++|
T Consensus        37 ~~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~-~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~  110 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTD--SGAVCLKRIHRP-E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY  110 (346)
T ss_dssp             EEECC----CEEEEEEET--TEEEEEEEECSC-H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred             eeeccccccCcEEEEEeC--CCCEEEEecCCC-H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence            345666778899998764  345889988652 2   233345555555431  12333332      123466789999


Q ss_pred             EecCCCChh--------------hhhhh--cC-----------CCCCHHHHH----------------------------
Q 042831          429 EFMPNGSLD--------------SHLFK--EN-----------SLLTWEFRY----------------------------  453 (645)
Q Consensus       429 Ey~~~gsL~--------------~~l~~--~~-----------~~l~~~~~~----------------------------  453 (645)
                      ||++|..+.              ..++.  ..           ....|...+                            
T Consensus       111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  190 (346)
T 2q83_A          111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ  190 (346)
T ss_dssp             ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred             EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence            999987653              11121  10           011332211                            


Q ss_pred             ---HHHHHHHHHHHHHHh----------hcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          454 ---KIAQDLASGLLYLQE----------EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       454 ---~i~~~ia~gL~yLH~----------~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                         .+...+..++.+|+.          .....++|+|+++.|||++.++.+.|.||+.+.
T Consensus       191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence               111223345666663          135789999999999999888899999999774

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.47  E-value=0.00043  Score=70.95  Aligned_cols=137  Identities=12%  Similarity=0.114  Sum_probs=91.6

Q ss_pred             CCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC---CCCccEEEeeeeeCCeEEEEEEecC
Q 042831          356 DDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR---HRNLVQLLGWCHEKKELLLVYEFMP  432 (645)
Q Consensus       356 ~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~---H~nlv~l~~~~~~~~~~~lV~Ey~~  432 (645)
                      ..+.|+.|....+|+....  +..+++|+....   ....+..|.+.|+.|.   ...+.+++.++...+..++||||++
T Consensus        40 ~~~~l~gG~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~  114 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLINDE--VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN  114 (312)
T ss_dssp             EEEEECCSSSSEEEEEESS--SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred             eeEEeCCccceeeeEEEEC--CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence            3567899999999998753  567888987533   3467888999998884   3567888999888889999999999


Q ss_pred             CCChhh-----------hhhhcCC---------------------CCCHHHHH---HHHH----------------HHHH
Q 042831          433 NGSLDS-----------HLFKENS---------------------LLTWEFRY---KIAQ----------------DLAS  461 (645)
Q Consensus       433 ~gsL~~-----------~l~~~~~---------------------~l~~~~~~---~i~~----------------~ia~  461 (645)
                      +..+..           .|+....                     .-+|....   ++..                .+..
T Consensus       115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~  194 (312)
T 3jr1_A          115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ  194 (312)
T ss_dssp             CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence            887531           1222111                     12454322   1111                1111


Q ss_pred             HH-HHHHh-hcCCCeeeccCCCCCeEECCCCcEEEeecc
Q 042831          462 GL-LYLQE-EWEQCVVHRDIKSSNIMLDSNFNAKIGDFG  498 (645)
Q Consensus       462 gL-~yLH~-~~~~~ivH~Dlkp~NILld~~~~~kl~DfG  498 (645)
                      -+ ..|.. .....++|+|+.+.|++++.++ +.|.|+.
T Consensus       195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            11 22321 1246799999999999999887 8888873

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.46  E-value=0.00017  Score=77.26  Aligned_cols=80  Identities=10%  Similarity=0.084  Sum_probs=48.7

Q ss_pred             CCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcceeecccCccccCccccccC---CCCcchhHHHHHHHHHHH
Q 042831          471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG---KASKESDVYSFGIVALEI  547 (645)
Q Consensus       471 ~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~t~~sDV~SfGvll~el  547 (645)
                      ...++|+|+++.|||++.++ ++|.||+.+..-.....-......-...|.+|+.....   ......++.+....+|+.
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL  309 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence            47899999999999998876 99999998875432111000000011345666654321   112235566778888887


Q ss_pred             HcCC
Q 042831          548 ACGR  551 (645)
Q Consensus       548 ltG~  551 (645)
                      ++++
T Consensus       310 y~~~  313 (420)
T 2pyw_A          310 FNKR  313 (420)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6653

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.36  E-value=0.00058  Score=69.00  Aligned_cols=80  Identities=14%  Similarity=0.165  Sum_probs=57.5

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCC---CCccEEEeeeeeCCeEEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH---RNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H---~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .....+.+|.|..+.||+....+ |+.+.+|+...........|..|+..|+.|..   --+.+++++.    .-++|||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~D-G~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e   90 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELAD-GTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME   90 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETT-SCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred             CeEEEEecCCCCCeEEEEEEECC-CCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEE
Confidence            34556789999999999999864 78899998765544444568889999998852   2345555543    2378999


Q ss_pred             ecCCCChh
Q 042831          430 FMPNGSLD  437 (645)
Q Consensus       430 y~~~gsL~  437 (645)
                      |++.+...
T Consensus        91 ~l~~~~~~   98 (288)
T 3f7w_A           91 WVDERPPT   98 (288)
T ss_dssp             CCCCCCCC
T ss_pred             eecccCCC
Confidence            99876543

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.01  E-value=0.0018  Score=66.23  Aligned_cols=155  Identities=12%  Similarity=0.152  Sum_probs=86.0

Q ss_pred             ChHHHHHhhcCCCC-----CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCC--ccEEE
Q 042831          343 PYKELALATNDFND-----DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN--LVQLL  415 (645)
Q Consensus       343 ~~~el~~~~~~f~~-----~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--lv~l~  415 (645)
                      +.+++......|..     .+.|+.|....+|+....+ | .+++|......  ...++..|+.++..++..+  +.+++
T Consensus         8 ~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~-g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~   83 (322)
T 2ppq_A            8 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK-D-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL   83 (322)
T ss_dssp             CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS-C-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred             CHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCC-c-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence            33444444444443     3456778889999987653 3 57889876521  1234556777777664222  23333


Q ss_pred             ee------eeeCCeEEEEEEecCCCChhh--------------hhhhc--C---C---C---CCHHHHHH----------
Q 042831          416 GW------CHEKKELLLVYEFMPNGSLDS--------------HLFKE--N---S---L---LTWEFRYK----------  454 (645)
Q Consensus       416 ~~------~~~~~~~~lV~Ey~~~gsL~~--------------~l~~~--~---~---~---l~~~~~~~----------  454 (645)
                      ..      ....+..+++++|++|..+..              .++..  .   .   .   ..|.....          
T Consensus        84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~  163 (322)
T 2ppq_A           84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE  163 (322)
T ss_dssp             CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred             CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence            21      123456789999998865431              11211  0   0   0   11322111          


Q ss_pred             --HHHHHHHHHHHHHhhc----CCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          455 --IAQDLASGLLYLQEEW----EQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       455 --i~~~ia~gL~yLH~~~----~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                        +...+.+.+.+++..+    ..+++|+|+.+.|||++++..+.|.||+.+.
T Consensus       164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence              0112444566665432    3579999999999999887666899998775

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=96.88  E-value=0.0025  Score=67.03  Aligned_cols=141  Identities=15%  Similarity=0.139  Sum_probs=84.5

Q ss_pred             CCccCcCCcEEEEEEEEcC-------CCeEEEEEEeccCChhhHHHHHHHHHHHHhcCC-CCccEEEeeeeeCCeEEEEE
Q 042831          357 DQKLGQGGFGGVYKGFFRE-------TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH-RNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~-------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H-~nlv~l~~~~~~~~~~~lV~  428 (645)
                      .+.|..|-...+|+....+       ++..+.+|+.... ........+|..+++.+.. .-..++++.+.+    .+||
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~  129 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE  129 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence            3467778888899988742       3467889986332 2234566789999988853 223566666654    2899


Q ss_pred             EecCCCChhhh-----------------hhhc----CCCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 042831          429 EFMPNGSLDSH-----------------LFKE----NSLLT--WEFRYKIAQDLAS-------------------GLLYL  466 (645)
Q Consensus       429 Ey~~~gsL~~~-----------------l~~~----~~~l~--~~~~~~i~~~ia~-------------------gL~yL  466 (645)
                      ||+++.+|...                 |+..    .+...  |.+..++..++..                   .+..|
T Consensus       130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L  209 (379)
T 3feg_A          130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL  209 (379)
T ss_dssp             ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred             EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence            99998666421                 1111    11122  4455555544322                   23344


Q ss_pred             Hhh-----cCCCeeeccCCCCCeEECCC----CcEEEeeccCccc
Q 042831          467 QEE-----WEQCVVHRDIKSSNIMLDSN----FNAKIGDFGLARL  502 (645)
Q Consensus       467 H~~-----~~~~ivH~Dlkp~NILld~~----~~~kl~DfGla~~  502 (645)
                      ...     ....++|+|+.+.||+++.+    +.+.+.||..+..
T Consensus       210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            322     23469999999999999876    7899999998864

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=96.81  E-value=0.0018  Score=69.53  Aligned_cols=74  Identities=16%  Similarity=0.178  Sum_probs=50.3

Q ss_pred             CCccCcCCcEEEEEEEEcC-------CCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCc-cEEEeeeeeCCeEEEEE
Q 042831          357 DQKLGQGGFGGVYKGFFRE-------TNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL-VQLLGWCHEKKELLLVY  428 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~-------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nl-v~l~~~~~~~~~~~lV~  428 (645)
                      .+.|+.|-...+|+....+       ++..+.+|+.....  ....+.+|..++..+...++ .++++.+.+    .+|+
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~  151 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  151 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence            3567888889999998753       24678899874321  11455679998888853334 567766543    2899


Q ss_pred             EecCCCCh
Q 042831          429 EFMPNGSL  436 (645)
Q Consensus       429 Ey~~~gsL  436 (645)
                      ||+++.+|
T Consensus       152 e~l~G~~l  159 (429)
T 1nw1_A          152 EYIPSRPL  159 (429)
T ss_dssp             CCCCEEEC
T ss_pred             EEeCCccc
Confidence            99986454

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=96.78  E-value=0.00097  Score=67.79  Aligned_cols=136  Identities=11%  Similarity=0.124  Sum_probs=74.6

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCc-cEEEeeeeeCCeEEEEEEec-CCC
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL-VQLLGWCHEKKELLLVYEFM-PNG  434 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nl-v~l~~~~~~~~~~~lV~Ey~-~~g  434 (645)
                      .+.|+.|....+|+.      ..+++|+....... ..+..+|+.++..+...++ .++++.+.  +.-++++||+ ++.
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~g~   93 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAGAQ   93 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTTCE
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCCCc
Confidence            677889999999998      33788887543221 1123467777777653233 45555443  3347899999 655


Q ss_pred             Chhhh------------------hhhcCCCC----C-HHHHHHHHH--------------HHHHHHHHHHh-----hcCC
Q 042831          435 SLDSH------------------LFKENSLL----T-WEFRYKIAQ--------------DLASGLLYLQE-----EWEQ  472 (645)
Q Consensus       435 sL~~~------------------l~~~~~~l----~-~~~~~~i~~--------------~ia~gL~yLH~-----~~~~  472 (645)
                      +|...                  ++.....+    . +........              .+...+..|..     ....
T Consensus        94 ~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~  173 (301)
T 3dxq_A           94 TMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPL  173 (301)
T ss_dssp             ECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCC
T ss_pred             cCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCc
Confidence            55321                  01111101    1 111111110              01111111111     1234


Q ss_pred             CeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       473 ~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      .++|+|+.+.||+ ..++.+.+.||..+..
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            5899999999999 5566789999998764

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=96.74  E-value=0.0063  Score=65.72  Aligned_cols=75  Identities=17%  Similarity=0.089  Sum_probs=49.1

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCc-cEEEeeeeeCCeEEEEEEecCCCC
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL-VQLLGWCHEKKELLLVYEFMPNGS  435 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nl-v~l~~~~~~~~~~~lV~Ey~~~gs  435 (645)
                      .+.|+.|-...+|+....+.+..+++|+....... .-+-.+|..++..|...++ .++++.+.  +  .+||||+++.+
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~  187 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA  187 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence            45688888899999988654578889987543211 1112478999998875555 46777663  2  25999998755


Q ss_pred             h
Q 042831          436 L  436 (645)
Q Consensus       436 L  436 (645)
                      |
T Consensus       188 l  188 (458)
T 2qg7_A          188 L  188 (458)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=96.51  E-value=0.011  Score=56.45  Aligned_cols=101  Identities=15%  Similarity=0.057  Sum_probs=67.4

Q ss_pred             CCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCccee
Q 042831          433 NGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTT  512 (645)
Q Consensus       433 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~~  512 (645)
                      .-||.+.|...+.++++++.|.++.|.+.+|.-+-.  +..-..+=+.|..|++..+|++...+ +.+.           
T Consensus        32 ~vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~-----------   97 (229)
T 2yle_A           32 ALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD-----------   97 (229)
T ss_dssp             EEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred             cccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc-----------
Confidence            347889998888999999999999999998776521  01111233456899999999988764 1110           


Q ss_pred             ecccCccccCccccccCCCCcchhHHHHHHHHHHHHcC
Q 042831          513 VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG  550 (645)
Q Consensus       513 ~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG  550 (645)
                        .....+.+||... ...+.+.-|||+|++||.-+-=
T Consensus        98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDy  132 (229)
T 2yle_A           98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDY  132 (229)
T ss_dssp             -----------CCSS-SSSCHHHHHHHHHHHHHHHHTT
T ss_pred             --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhc
Confidence              1122356888653 3567889999999999999863

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=96.48  E-value=0.012  Score=60.48  Aligned_cols=140  Identities=16%  Similarity=0.109  Sum_probs=71.4

Q ss_pred             CCccCcCCcEE-EEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCC--CCccEEEeeeeeCCeEEEEEEecCC
Q 042831          357 DQKLGQGGFGG-VYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH--RNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       357 ~~~LG~G~fG~-Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H--~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      .+.|+.|+... +|+.... ++..+++|.......   .++..|+.++..+..  -.+.+++.+..+.+  +++||++++
T Consensus        23 ~~~l~gg~s~~~~~r~~~~-~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~   96 (333)
T 3csv_A           23 RTPLAGDASSRRYQRLRSP-TGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGD   96 (333)
T ss_dssp             ECC--------CCEEEECT-TCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCS
T ss_pred             eeECCCCCCCceEEEEEcC-CCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCC
Confidence            34566665554 6676542 245677775433211   233456676666642  23556776654444  789999977


Q ss_pred             CChhhhhhh---------------------cC----CCCCHHHHH-------H-------------HHHHHHHHHHHHHh
Q 042831          434 GSLDSHLFK---------------------EN----SLLTWEFRY-------K-------------IAQDLASGLLYLQE  468 (645)
Q Consensus       434 gsL~~~l~~---------------------~~----~~l~~~~~~-------~-------------i~~~ia~gL~yLH~  468 (645)
                      ..+.+++..                     ..    ...+.....       .             ....+...+..+..
T Consensus        97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~  176 (333)
T 3csv_A           97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS  176 (333)
T ss_dssp             CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence            666433211                     00    011111000       0             00111122222311


Q ss_pred             ---hcCCCeeeccCCCCCeEECCC----CcEEEeeccCccc
Q 042831          469 ---EWEQCVVHRDIKSSNIMLDSN----FNAKIGDFGLARL  502 (645)
Q Consensus       469 ---~~~~~ivH~Dlkp~NILld~~----~~~kl~DfGla~~  502 (645)
                         .....++|+|+.+.|||++.+    ..+.|.||+.+..
T Consensus       177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence               124679999999999999874    6899999998864

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=96.46  E-value=0.0079  Score=61.56  Aligned_cols=140  Identities=11%  Similarity=0.099  Sum_probs=80.3

Q ss_pred             CccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCC--ccEEEee-----eeeCCeEEEEEEe
Q 042831          358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN--LVQLLGW-----CHEKKELLLVYEF  430 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--lv~l~~~-----~~~~~~~~lV~Ey  430 (645)
                      ..++ |....||+.... +|+.+++|...... .....+..|..++..+....  +++++..     ....+..+++|||
T Consensus        32 ~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~  108 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDE-DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS  108 (328)
T ss_dssp             EEEC-CSSSEEEEECCT-TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred             Eeec-CcccceEEEEcC-CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence            3466 777899987654 35578999886331 12345667888887774222  3444432     2234567889999


Q ss_pred             cCCCChhh----h----------hhh--c------CCCCCHHHH----HHH---------------HHHHHHHHHHHHhh
Q 042831          431 MPNGSLDS----H----------LFK--E------NSLLTWEFR----YKI---------------AQDLASGLLYLQEE  469 (645)
Q Consensus       431 ~~~gsL~~----~----------l~~--~------~~~l~~~~~----~~i---------------~~~ia~gL~yLH~~  469 (645)
                      +++..+..    .          ++.  .      ....++...    ..+               ...+...+..+...
T Consensus       109 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~  188 (328)
T 1zyl_A          109 VGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH  188 (328)
T ss_dssp             CCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            98765431    0          111  0      011222211    001               11111223333322


Q ss_pred             ----cCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          470 ----WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       470 ----~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                          ....++|+|+++.|||++ + .+.|.||+.+..
T Consensus       189 ~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          189 WREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             hhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence                245689999999999999 4 899999988753

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=96.37  E-value=0.0097  Score=62.19  Aligned_cols=75  Identities=12%  Similarity=0.117  Sum_probs=44.4

Q ss_pred             CCccCcCCcEEEEEEEEcCC--------CeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCC-ccEEEeeeeeCCeEEEE
Q 042831          357 DQKLGQGGFGGVYKGFFRET--------NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN-LVQLLGWCHEKKELLLV  427 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~--------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~n-lv~l~~~~~~~~~~~lV  427 (645)
                      .+.|+.|..-.+|+....+.        +..+++|+...... ...+...|..++..+...+ ..++++..  .+  ++|
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~~v  112 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--NG--GRI  112 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEE
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--CC--cEE
Confidence            34677788889999987531        25788887654322 1123357888888775334 34666543  22  689


Q ss_pred             EEecCCCCh
Q 042831          428 YEFMPNGSL  436 (645)
Q Consensus       428 ~Ey~~~gsL  436 (645)
                      |||+++..+
T Consensus       113 ~e~i~G~~l  121 (369)
T 3c5i_A          113 EEWLYGDPL  121 (369)
T ss_dssp             EECCCSEEC
T ss_pred             EEEecCCcC
Confidence            999987554

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=95.23  E-value=0.096  Score=53.93  Aligned_cols=32  Identities=22%  Similarity=0.346  Sum_probs=28.2

Q ss_pred             CCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       471 ~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      ...++|+|+.+.||++++++.+.|.||+.+..
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            35799999999999999888899999987764

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=93.65  E-value=0.18  Score=53.59  Aligned_cols=140  Identities=12%  Similarity=0.177  Sum_probs=83.8

Q ss_pred             CCccCcCCcEEEEEEEEcCC-------CeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCC-ccEEEeeeeeCCeEEEEE
Q 042831          357 DQKLGQGGFGGVYKGFFRET-------NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN-LVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~-------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~n-lv~l~~~~~~~~~~~lV~  428 (645)
                      .+.+..|-...+|+....+.       +..+++|+...... ..-+-.+|..++..+...+ ..++++.+.  +  ++||
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~~--~--~~I~  149 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADFP--E--GRIE  149 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEcC--C--CEEE
Confidence            45677788889999987531       46788888644322 1122356888888775322 345565332  2  7899


Q ss_pred             EecCCCChhhh-----------------hhh--c---------CC-CCCHHHHHHHHHHH-------------------H
Q 042831          429 EFMPNGSLDSH-----------------LFK--E---------NS-LLTWEFRYKIAQDL-------------------A  460 (645)
Q Consensus       429 Ey~~~gsL~~~-----------------l~~--~---------~~-~l~~~~~~~i~~~i-------------------a  460 (645)
                      ||+++.+|...                 ++.  .         .. ..-|.+..++..++                   .
T Consensus       150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~  229 (424)
T 3mes_A          150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL  229 (424)
T ss_dssp             ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred             EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence            99998765310                 110  0         11 11244444433322                   2


Q ss_pred             HHHHHHHhh---------------------cCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          461 SGLLYLQEE---------------------WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       461 ~gL~yLH~~---------------------~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      ..+.+|.+.                     ....++|+|+.+.||+ +.++.+.+.||..+..
T Consensus       230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            233444321                     1246899999999999 7888999999998864

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=88.35  E-value=0.57  Score=49.29  Aligned_cols=30  Identities=23%  Similarity=0.378  Sum_probs=25.4

Q ss_pred             CeeeccCCCCCeEE------CCCCcEEEeeccCccc
Q 042831          473 CVVHRDIKSSNIML------DSNFNAKIGDFGLARL  502 (645)
Q Consensus       473 ~ivH~Dlkp~NILl------d~~~~~kl~DfGla~~  502 (645)
                      .++|+|+.+.|||+      +++..+.+.||..|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            46799999999999      4567799999998864

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=84.47  E-value=0.1  Score=56.35  Aligned_cols=61  Identities=5%  Similarity=0.046  Sum_probs=17.3

Q ss_pred             CCCccCcCCcEEEEEEEEcCCCeEEEE------EEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeee
Q 042831          356 DDQKLGQGGFGGVYKGFFRETNSYIAV------KRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCH  419 (645)
Q Consensus       356 ~~~~LG~G~fG~Vy~g~~~~~~~~vav------K~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~  419 (645)
                      ..++||   ||.||+|.+.....+||+      |.....  +++....+.+|..++..++|||+++.+++..
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence            345676   999999999765567888      766542  3344567889999999999999999877653

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=83.56  E-value=2.8  Score=39.72  Aligned_cols=116  Identities=6%  Similarity=0.034  Sum_probs=78.9

Q ss_pred             CCCCccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE
Q 042831          407 RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML  486 (645)
Q Consensus       407 ~H~nlv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl  486 (645)
                      .||++++. .+-..++.+.+.|+.-+++  ..+-  .-..++...+++++..|+....+++.     =+|--|.|+|+++
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~--~~f~--~ik~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL~f  112 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNH--TPFD--NIKSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDELFF  112 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTS--EEGG--GGGGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGEEE
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCccc--CCHH--HHHhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceEEE
Confidence            58888876 4555666666666654322  2222  12357888999999999877755553     4678899999999


Q ss_pred             CCCCcEEEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCC
Q 042831          487 DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPIN  555 (645)
Q Consensus       487 d~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~  555 (645)
                      |.++.+++.-.|+...                  ++|.     ..+...=.-.+=|++..+++++..|+
T Consensus       113 ~~~~~p~i~~RGik~~------------------l~P~-----~~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          113 TRDGLPIAKTRGLQNV------------------VDPL-----PVSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             CTTSCEEESCCEETTT------------------BSCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             cCCCCEEEEEccCccC------------------CCCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            9999999986665422                  2232     22223334468889999999998885

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	645
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-71
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-68
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-67
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-66
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	9e-66
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-65
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-63
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-63
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-63
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-62
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-62
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-62
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-61
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-61
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-60
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-60
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-60
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-60
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-60
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-60
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	9e-60
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-59
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-58
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-58
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-57
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-57
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	8e-57
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-56
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-56
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-55
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-55
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-52
d1v6ia_	232	b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypog	3e-52
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	5e-52
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	6e-52
d1hqla_	236	b.29.1.1 (A:) Legume lectin {Griffonia simplicifol	2e-51
d1qnwa_	237	b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus	2e-51
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-50
d1gzca_	239	b.29.1.1 (A:) Legume lectin {Cockspur coral tree (	3e-50
d1fx5a_	240	b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus	8e-50
d1g9fa_	251	b.29.1.1 (A:) Legume lectin {Soybean (Glycine max)	1e-49
d2d3sa1	237	b.29.1.1 (A:1-237) Legume lectin {Winged bean (Pso	3e-49
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	4e-49
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-49
d1g7ya_	253	b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos	4e-49
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	8e-49
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-48
d1f9ka_	234	b.29.1.1 (A:) Legume lectin {Winged bean (Psophoca	1e-48
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-48
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-48
d1g8wa_	233	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	1e-47
d1n47a_	233	b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia vi	3e-47
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-46
d1avba_	226	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	2e-46
d1dbna_	239	b.29.1.1 (A:) Legume lectin {Maackia amurensis, le	2e-46
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-46
d1fnya_	237	b.29.1.1 (A:) Legume lectin {Black locust (Robinia	3e-46
g1qmo.1	230	b.29.1.1 (A:,E:) Legume lectin {Field bean (Dolich	4e-46
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-46
d1ukga_	241	b.29.1.1 (A:) Legume lectin {Bloodwood tree (Ptero	7e-46
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-45
g2ltn.1	229	b.29.1.1 (A:,B:) Legume lectin {Garden pea (Pisum	5e-45
d1ioaa_	228	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	5e-45
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-44
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-44
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-44
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	9e-44
d1leda_	243	b.29.1.1 (A:) Legume lectin {West-central african	1e-43
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-43
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-43
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	8e-43
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-41
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-41
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	7e-40
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	6e-39
d1dhkb_	204	b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also ar	4e-38
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-36
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-36
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-35
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	9e-34
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-31
d1nlsa_	237	b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia	2e-30
d1nlsa_	237	b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia	2e-18
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-29
d1gv9a_	228	b.29.1.13 (A:) Carbohydrate-recognition domain of	3e-26
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-18
d2a6va1	218	b.29.1.13 (A:9-226) Emp46p N-terminal domain {Bake	1e-09
d2a6za1	221	b.29.1.13 (A:7-227) Emp47p N-terminal domain {Bake	3e-06

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  230 bits (588), Expect = 1e-71
 Identities = 83/286 (29%), Positives = 134/286 (46%), Gaps = 25/286 (8%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVK--RVSQGSKQGIKEYASEVKIISRLRHR 409
                 Q++G G FG VYKG +      +AVK   V+  + Q ++ + +EV ++ + RH 
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
           N++  +G+    + L +V ++    SL  HL    +         IA+  A G+ YL   
Sbjct: 65  NILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL--- 120

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATT 528
             + ++HRD+KS+NI L  +   KIGDFGLA +     GS Q   L+G++ +MAPE    
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180

Query: 529 ---GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR 585
                 S +SDVY+FGIV  E+  G+ P +       ++    +  + G G L    D  
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYS------NINNRDQIIFMVGRGYLSP--DLS 232

Query: 586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL-NFEAPLP 630
             R    + ++RLM     C     + RP   Q++  +      LP
Sbjct: 233 KVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIELLARSLP 275

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  221 bits (564), Expect = 3e-68
 Identities = 68/272 (25%), Positives = 127/272 (46%), Gaps = 20/272 (7%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL 411
           ++    Q++G G FG V+ G++   +   A+K + +      +++  E +++ +L H  L
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIRE-GAMSEEDFIEEAEVMMKLSHPKL 62

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           VQL G C E+  + LV+EFM +G L  +L  +  L   E    +  D+  G+ YL    E
Sbjct: 63  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EE 119

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA 531
            CV+HRD+ + N ++  N   K+ DFG+ R V   + + +T     + + +PE  +  + 
Sbjct: 120 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 179

Query: 532 SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD 591
           S +SDV+SFG++  E+    K   P   +    +++ +              PRL     
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGKI--PYENRSNSEVVEDI------STGFRLYKPRLA---- 227

Query: 592 GQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
              + ++M     C       RP+  +++  L
Sbjct: 228 STHVYQIM---NHCWKERPEDRPAFSRLLRQL 256

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  221 bits (565), Expect = 1e-67
 Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 7/212 (3%)

Query: 347 LALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISR 405
           + L  +DF    +LG G  G V+K   + +   +A K +    K  I+     E++++  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60

Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
                +V   G  +   E+ +  E M  GSLD  L K+   +  +   K++  +  GL Y
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSIAVIKGLTY 119

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           L+E+    ++HRD+K SNI+++S    K+ DFG++  +     S      GT  YM+PE 
Sbjct: 120 LREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSYMSPER 174

Query: 526 ATTGKASKESDVYSFGIVALEIACGRKPINPK 557
                 S +SD++S G+  +E+A GR PI P 
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  217 bits (554), Expect = 2e-66
 Identities = 77/301 (25%), Positives = 137/301 (45%), Gaps = 37/301 (12%)

Query: 342 FPYKELALATNDFND---------DQKLGQGGFGGVYKGFFRETNS---YIAVKRVSQG- 388
           F +++   A  +F           +Q +G G FG V  G  +       ++A+K +  G 
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 389 SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLT 448
           +++  +++ SE  I+ +  H N++ L G   +   ++++ EFM NGSLDS L + +   T
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 126

Query: 449 WEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG 508
                 + + +A+G+ YL    +   VHRD+ + NI+++SN   K+ DFGL+R +E    
Sbjct: 127 VIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 183

Query: 509 SQTTVLA----GTMGYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAPQGQV 563
             T   A      + + APE     K +  SDV+S+GIV  E+ + G +P          
Sbjct: 184 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP---------- 233

Query: 564 SLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
                 +    N  ++ A++              L  + L C   D N RP   Q+++ L
Sbjct: 234 ------YWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 287

Query: 624 N 624
           +
Sbjct: 288 D 288

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  215 bits (549), Expect = 9e-66
 Identities = 69/286 (24%), Positives = 130/286 (45%), Gaps = 20/286 (6%)

Query: 339 PKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS 398
           P    Y +  +   D     KLG G +G VY+G +++ +  +AVK + + + + ++E+  
Sbjct: 4   PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLK 62

Query: 399 EVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSL-LTWEFRYKIAQ 457
           E  ++  ++H NLVQLLG C  +    ++ EFM  G+L  +L + N   ++      +A 
Sbjct: 63  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 122

Query: 458 DLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGT 517
            ++S + YL    ++  +HRD+ + N ++  N   K+ DFGL+RL+     +        
Sbjct: 123 QISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179

Query: 518 MGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK 577
           + + APE     K S +SDV++FG++  EIA       P     Q               
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------------- 224

Query: 578 LLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
           + E ++     +      E++  +   C   + + RPS  ++    
Sbjct: 225 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 270

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  214 bits (545), Expect = 1e-65
 Identities = 65/275 (23%), Positives = 129/275 (46%), Gaps = 23/275 (8%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL 411
            D    ++LG G FG V  G +R     +A+K + +GS     E+  E K++  L H  L
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKL 61

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           VQL G C +++ + ++ E+M NG L ++L +       +   ++ +D+   + YL     
Sbjct: 62  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ES 118

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA 531
           +  +HRD+ + N +++     K+ DFGL+R V   + + +      + +  PE     K 
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 178

Query: 532 SKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF 590
           S +SD+++FG++  EI + G+ P                ++ + N +  E +   L    
Sbjct: 179 SSKSDIWAFGVLMWEIYSLGKMP----------------YERFTNSETAEHIAQGLRLYR 222

Query: 591 DGQQIERLMIVGLWCAHPDENLRPSIRQVI-HVLN 624
                E++  +   C H   + RP+ + ++ ++L+
Sbjct: 223 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 257

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  209 bits (533), Expect = 1e-63
 Identities = 74/273 (27%), Positives = 129/273 (47%), Gaps = 22/273 (8%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL 411
                 ++LG G FG V+ G++   ++ +AVK + QGS      + +E  ++ +L+H+ L
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRL 70

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSL-LTWEFRYKIAQDLASGLLYLQEEW 470
           V+L     ++  + ++ E+M NGSL   L   + + LT      +A  +A G+ ++    
Sbjct: 71  VRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---E 126

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK 530
           E+  +HRD++++NI++    + KI DFGLARL+E  + +        + + APE    G 
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 186

Query: 531 ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF 590
            + +SDV+SFGI+  EI    +   P     +V  +Q +   Y        V P  C   
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV--IQNLERGY------RMVRPDNC--- 235

Query: 591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
                E L  +   C       RP+   +  VL
Sbjct: 236 ----PEELYQLMRLCWKERPEDRPTFDYLRSVL 264

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  209 bits (532), Expect = 2e-63
 Identities = 68/287 (23%), Positives = 128/287 (44%), Gaps = 27/287 (9%)

Query: 345 KELALATNDFN-DDQKLGQGGFGGVYKGFFRETNS--YIAVKRVSQGSKQG-IKEYASEV 400
           K+L L  ++    D +LG G FG V +G +R       +A+K + QG+++   +E   E 
Sbjct: 1   KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 60

Query: 401 KIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLA 460
           +I+ +L +  +V+L+G C + + L+LV E    G L   L  +   +      ++   ++
Sbjct: 61  QIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVS 119

Query: 461 SGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV--EHAKGSQTTVLAGTM 518
            G+ YL    E+  VHRD+ + N++L +   AKI DFGL++ +  + +  +  +     +
Sbjct: 120 MGMKYL---EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 176

Query: 519 GYMAPECATTGKASKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGK 577
            + APEC    K S  SDV+S+G+   E  + G+KP                +      +
Sbjct: 177 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP----------------YKKMKGPE 220

Query: 578 LLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           ++  ++     +   +    L  +   C       RP    V   + 
Sbjct: 221 VMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 267

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  209 bits (533), Expect = 3e-63
 Identities = 69/290 (23%), Positives = 121/290 (41%), Gaps = 28/290 (9%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           + +G+G FG V++G  +     +AVK  S   ++     A E+     LRH N++  +  
Sbjct: 9   ESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREA-EIYQTVMLRHENILGFIAA 65

Query: 418 CHEK----KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC 473
            ++      +L LV ++  +GSL  +L +    +T E   K+A   ASGL +L  E    
Sbjct: 66  DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGT 123

Query: 474 -----VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS---QTTVLAGTMGYMAPEC 525
                + HRD+KS NI++  N    I D GLA   + A  +         GT  YMAPE 
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 183

Query: 526 ATT------GKASKESDVYSFGIVALEIACGRKPINP----KAPQGQVSLLQWVWDLYGN 575
                     ++ K +D+Y+ G+V  EIA            + P   +       +    
Sbjct: 184 LDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRK 243

Query: 576 GKLLEAVDPRLCRDFDGQQIERLMI-VGLWCAHPDENLRPSIRQVIHVLN 624
               + + P +   +   +  R+M  +   C + +   R +  ++   L+
Sbjct: 244 VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  205 bits (524), Expect = 3e-62
 Identities = 65/277 (23%), Positives = 117/277 (42%), Gaps = 26/277 (9%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRN 410
           D+     +G G +G   K   +     +  K +  GS  +   +   SEV ++  L+H N
Sbjct: 5   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64

Query: 411 LVQLLGWCHEKKE--LLLVYEFMPNGSLDSHLF---KENSLLTWEFRYKIAQDLASGLLY 465
           +V+      ++    L +V E+   G L S +    KE   L  EF  ++   L   L  
Sbjct: 65  IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 124

Query: 466 L--QEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAP 523
              + +    V+HRD+K +N+ LD   N K+GDFGLAR++ H   S      GT  YM+P
Sbjct: 125 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKAFVGTPYYMSP 183

Query: 524 ECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD 583
           E       +++SD++S G +  E+     P    + +                K+ E   
Sbjct: 184 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG------------KIREGKF 231

Query: 584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
            R+   +   ++  ++       +  +  RPS+ +++
Sbjct: 232 RRIPYRYS-DELNEII---TRMLNLKDYHRPSVEEIL 264

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  206 bits (524), Expect = 4e-62
 Identities = 76/286 (26%), Positives = 126/286 (44%), Gaps = 24/286 (8%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL 411
                + KLGQG FG V+ G +  T   +A+K +        + +  E +++ +LRH  L
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKL 74

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENS-LLTWEFRYKIAQDLASGLLYLQEEW 470
           VQL      ++ + +V E+M  GSL   L  E    L       +A  +ASG+ Y++   
Sbjct: 75  VQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER-- 131

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK 530
               VHRD++++NI++  N   K+ DFGLARL+E  + +        + + APE A  G+
Sbjct: 132 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR 190

Query: 531 ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF 590
            + +SDV+SFGI+  E+    +   P     +V               L+ V+       
Sbjct: 191 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---------------LDQVERGYRMPC 235

Query: 591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN--FEAPLPALPP 634
             +  E L  +   C   +   RP+   +   L   F +  P   P
Sbjct: 236 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP 281

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  206 bits (525), Expect = 5e-62
 Identities = 74/278 (26%), Positives = 126/278 (45%), Gaps = 26/278 (9%)

Query: 355 NDDQKLGQGGFGGVYKGFFRETNS---YIAVKRVSQGSKQG-IKEYASEVKIISRLRHRN 410
           + ++ +G+G FG VY G   + +    + AVK +++ +  G + ++ +E  I+    H N
Sbjct: 30  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89

Query: 411 LVQLLGWCHE-KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
           ++ LLG C   +   L+V  +M +G L + +  E    T +        +A G+   +  
Sbjct: 90  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM---KFL 146

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ---TTVLAGTMGYMAPECA 526
             +  VHRD+ + N MLD  F  K+ DFGLAR +   +       T     + +MA E  
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 206

Query: 527 TTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL 586
            T K + +SDV+SFG++  E+     P     P   V+       L    +LL    P  
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLL---QPEY 258

Query: 587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           C        + L  V L C HP   +RPS  +++  ++
Sbjct: 259 C-------PDPLYEVMLKCWHPKAEMRPSFSELVSRIS 289

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  204 bits (520), Expect = 1e-61
 Identities = 66/289 (22%), Positives = 132/289 (45%), Gaps = 25/289 (8%)

Query: 349 LATNDFNDDQKLGQGGFGGVYKGFFRETNS----YIAVKRVSQGSKQG-IKEYASEVKII 403
           +  +     + +G G FG VYKG  + ++      +A+K +  G  +    ++  E  I+
Sbjct: 4   IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIM 63

Query: 404 SRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGL 463
            +  H N+++L G   + K ++++ E+M NG+LD  L +++   +      + + +A+G+
Sbjct: 64  GQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGM 123

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH--AKGSQTTVLAGTMGYM 521
            Y         VHRD+ + NI+++SN   K+ DFGL+R++E        T+     + + 
Sbjct: 124 KY---LANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT 180

Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA 581
           APE  +  K +  SDV+SFGIV  E+    +                 W+L  N ++++A
Sbjct: 181 APEAISYRKFTSASDVWSFGIVMWEVMTYGER--------------PYWELS-NHEVMKA 225

Query: 582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLP 630
           ++              +  + + C   +   RP    ++ +L+     P
Sbjct: 226 INDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 274

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  204 bits (520), Expect = 3e-61
 Identities = 63/273 (23%), Positives = 108/273 (39%), Gaps = 30/273 (10%)

Query: 354 FNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQG---IKEYASEVKIISRLRHRN 410
           F+D +++G G FG VY       +  +A+K++S   KQ     ++   EV+ + +LRH N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
            +Q  G    +    LV E+    + D     +   L       +      GL YL    
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP-LQEVEIAAVTHGALQGLAYLH--- 132

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE---CAT 527
              ++HRD+K+ NI+L      K+GDFG A ++     +      GT  +MAPE      
Sbjct: 133 SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM-----APANSFVGTPYWMAPEVILAMD 187

Query: 528 TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC 587
            G+   + DV+S GI  +E+A  + P+        +              + +   P L 
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY------------HIAQNESPALQ 235

Query: 588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
                +     +     C       RP+   ++
Sbjct: 236 SGHWSEYFRNFV---DSCLQKIPQDRPTSEVLL 265

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  201 bits (513), Expect = 1e-60
 Identities = 62/269 (23%), Positives = 118/269 (43%), Gaps = 23/269 (8%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
            +LG G FG VYK   +ET+   A K +   S++ +++Y  E+ I++   H N+V+LL  
Sbjct: 18  GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 77

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
            + +  L ++ EF   G++D+ + +    LT      + +     L YL    +  ++HR
Sbjct: 78  FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHR 134

Query: 478 DIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA-----S 532
           D+K+ NI+   + + K+ DFG++         +     GT  +MAPE      +      
Sbjct: 135 DLKAGNILFTLDGDIKLADFGVSAKNTR-TIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 193

Query: 533 KESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDG 592
            ++DV+S GI  +E+A    P +   P   +             K+ ++  P L +    
Sbjct: 194 YKADVWSLGITLIEMAEIEPPHHELNPMRVLL------------KIAKSEPPTLAQPSRW 241

Query: 593 QQIERLMIVGLWCAHPDENLRPSIRQVIH 621
               +  +      + D   R +  Q++ 
Sbjct: 242 SSNFKDFLKKCLEKNVDA--RWTTSQLLQ 268

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  203 bits (518), Expect = 2e-60
 Identities = 66/293 (22%), Positives = 125/293 (42%), Gaps = 21/293 (7%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL 411
           + ++  ++LG G FG V++   R T +  A K V    +   +    E++ +S LRH  L
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           V L     +  E++++YEFM  G L   +  E++ ++ +   +  + +  GL ++    E
Sbjct: 86  VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM---HE 142

Query: 472 QCVVHRDIKSSNIMLDSNFN--AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG 529
              VH D+K  NIM  +  +   K+ DFGL   ++  +  + T   GT  + APE A   
Sbjct: 143 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGK 200

Query: 530 KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD 589
                +D++S G+++  +  G  P   +     +  +        +  + ++    +  D
Sbjct: 201 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV-----KSCDWNMDDSAFSGISED 255

Query: 590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVI-HVLNFEAPLPALPPKMPVPTY 641
                  +  I  L  A P+   R +I Q + H        P    ++P   Y
Sbjct: 256 G------KDFIRKLLLADPNT--RMTIHQALEHPWLTPGNAPGRDSQIPSSRY 300

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  202 bits (514), Expect = 2e-60
 Identities = 79/305 (25%), Positives = 133/305 (43%), Gaps = 43/305 (14%)

Query: 339 PKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSY--IAVKRVSQ-GSKQGIKE 395
           P  +P  +     ND      +G+G FG V K   ++       A+KR+ +  SK   ++
Sbjct: 1   PTIYPVLDW----NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD 56

Query: 396 YASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSL-------- 446
           +A E++++ +L  H N++ LLG C  +  L L  E+ P+G+L   L K   L        
Sbjct: 57  FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 116

Query: 447 -------LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL 499
                  L+ +     A D+A G+ YL    ++  +HRD+ + NI++  N+ AKI DFGL
Sbjct: 117 ANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGL 173

Query: 500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAP 559
           +R  E     + T+    + +MA E       +  SDV+S+G++  EI           P
Sbjct: 174 SRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT-----P 226

Query: 560 QGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQV 619
              ++  +         KL +        + D  ++  LM     C       RPS  Q+
Sbjct: 227 YCGMTCAELYE------KLPQGYRLEKPLNCD-DEVYDLM---RQCWREKPYERPSFAQI 276

Query: 620 IHVLN 624
           +  LN
Sbjct: 277 LVSLN 281

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (510), Expect = 2e-60
 Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 27/272 (9%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVS--QGSKQGIKEYASEVKIISRLRHRNLVQL 414
           D ++G+G F  VYKG   ET   +A   +   + +K   + +  E +++  L+H N+V+ 
Sbjct: 14  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 73

Query: 415 LGWCHE----KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
                     KK ++LV E M +G+L ++L +    +  +      + +  GL +L    
Sbjct: 74  YDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV-MKIKVLRSWCRQILKGLQFLHTRT 132

Query: 471 EQCVVHRDIKSSNIMLDS-NFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG 529
              ++HRD+K  NI +     + KIGD GLA L      S    + GT  +MAPE     
Sbjct: 133 PP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKR---ASFAKAVIGTPEFMAPEMY-EE 187

Query: 530 KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD 589
           K  +  DVY+FG+  LE+A    P +      Q+             ++   V P     
Sbjct: 188 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR-----------RVTSGVKPASFDK 236

Query: 590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIH 621
               +++ ++     C   +++ R SI+ +++
Sbjct: 237 VAIPEVKEII---EGCIRQNKDERYSIKDLLN 265

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (509), Expect = 3e-60
 Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 27/272 (9%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRH 408
            DF   + LG+G FG VY    +++   +A+K + +          +   EV+I S LRH
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
            N+++L G+ H+   + L+ E+ P G++   L K +     +       +LA+ L Y   
Sbjct: 66  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC-- 122

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT 528
              + V+HRDIK  N++L S    KI DFG +    HA  S+ T L GT+ Y+ PE    
Sbjct: 123 -HSKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEG 178

Query: 529 GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR 588
               ++ D++S G++  E   G+ P      Q     +             + V     R
Sbjct: 179 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-----SRVEFTFPDFVTEG-AR 232

Query: 589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
           D          I  L   +P +  RP +R+V+
Sbjct: 233 DL---------ISRLLKHNPSQ--RPMLREVL 253

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (508), Expect = 4e-60
 Identities = 79/276 (28%), Positives = 123/276 (44%), Gaps = 32/276 (11%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL 411
            +    Q +G+G FG V  G      + +AVK +   +    + + +E  ++++LRH NL
Sbjct: 7   KELKLLQTIGKGEFGDVMLG--DYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNL 62

Query: 412 VQLLGWCHEKKE-LLLVYEFMPNGSLDSHLFKEN-SLLTWEFRYKIAQDLASGLLYLQEE 469
           VQLLG   E+K  L +V E+M  GSL  +L     S+L  +   K + D+   + YL   
Sbjct: 63  VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--- 119

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG 529
                VHRD+ + N+++  +  AK+ DFGL +       S        + + APE     
Sbjct: 120 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS----STQDTGKLPVKWTAPEALREK 175

Query: 530 KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD--PRLC 587
           K S +SDV+SFGI+  EI    +   P+ P      L+ V      G  ++A D  P   
Sbjct: 176 KFSTKSDVWSFGILLWEIYSFGRVPYPRIP------LKDVVPRVEKGYKMDAPDGCPPAV 229

Query: 588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
            +               C H D  +RPS  Q+   L
Sbjct: 230 YEV-----------MKNCWHLDAAMRPSFLQLREQL 254

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (510), Expect = 9e-60
 Identities = 64/301 (21%), Positives = 126/301 (41%), Gaps = 27/301 (8%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSY----IAVKRVSQG-SKQGIKEYASEVKIISRLR 407
           +F   + LG G FG VYKG +          +A+K + +  S +  KE   E  +++ + 
Sbjct: 10  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69

Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
           + ++ +LLG C     + L+ + MP G L  ++ +    +  ++       +A G+ YL 
Sbjct: 70  NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL- 127

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV-EHAKGSQTTVLAGTMGYMAPECA 526
              ++ +VHRD+ + N+++ +  + KI DFGLA+L+    K          + +MA E  
Sbjct: 128 --EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185

Query: 527 TTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL 586
                + +SDV+S+G+   E+                      +D     ++   ++   
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKP---------------YDGIPASEISSILEKGE 230

Query: 587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA--PLPALPPKMPVPTYLSP 644
                      + ++ + C   D + RP  R++I   +  A  P   L  +     +L  
Sbjct: 231 RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPS 290

Query: 645 P 645
           P
Sbjct: 291 P 291

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (507), Expect = 1e-59
 Identities = 67/289 (23%), Positives = 124/289 (42%), Gaps = 22/289 (7%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN 410
              +   +K+GQG  G VY      T   +A+++++   +   +   +E+ ++   ++ N
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           +V  L       EL +V E++  GSL   + +            + ++    L +L    
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCM--DEGQIAAVCRECLQALEFLH--- 133

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGK 530
              V+HRDIKS NI+L  + + K+ DFG    +   + S+ + + GT  +MAPE  T   
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTMVGTPYWMAPEVVTRKA 192

Query: 531 ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF 590
              + D++S GI+A+E+  G  P   + P     L     +     +  E +   + RDF
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA--LYLIATNGTPELQNPEKLSA-IFRDF 249

Query: 591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIH--VLNFEAPLPALPPKMP 637
               + R +         D   R S ++++    L    PL +L P + 
Sbjct: 250 ----LNRCL-------DMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIA 287

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  195 bits (496), Expect = 3e-58
 Identities = 65/276 (23%), Positives = 120/276 (43%), Gaps = 28/276 (10%)

Query: 356 DDQKLGQGGFGGVYKGFFR--ETNSYIAVKRVSQGSKQG--IKEYASEVKIISRLRHRNL 411
           +D++LG G FG V KG+++  +    +AVK +   +       E  +E  ++ +L +  +
Sbjct: 11  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70

Query: 412 VQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWE 471
           V+++G C E +  +LV E    G L+ +L +   +   +   ++   ++ G+ YL    E
Sbjct: 71  VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGMKYL---EE 125

Query: 472 QCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV--EHAKGSQTTVLAGTMGYMAPECATTG 529
              VHRD+ + N++L +   AKI DFGL++ +  +       T     + + APEC    
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185

Query: 530 KASKESDVYSFGIVALEI-ACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR 588
           K S +SDV+SFG++  E  + G+KP                +      ++   ++     
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQKP----------------YRGMKGSEVTAMLEKGERM 229

Query: 589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
                    +  +   C   D   RP    V   L 
Sbjct: 230 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 265

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  195 bits (497), Expect = 4e-58
 Identities = 71/310 (22%), Positives = 125/310 (40%), Gaps = 48/310 (15%)

Query: 344 YKELALATNDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVS-QGSKQGIKEYA 397
              L    N+    + +G+G FG V++         E  + +AVK +  + S     ++ 
Sbjct: 5   LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ 64

Query: 398 SEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSL----------- 446
            E  +++   + N+V+LLG C   K + L++E+M  G L+  L   +             
Sbjct: 65  REAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 124

Query: 447 ------------LTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKI 494
                       L+   +  IA+ +A+G+ YL    E+  VHRD+ + N ++  N   KI
Sbjct: 125 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKI 181

Query: 495 GDFGLARLVEHAKGSQ-TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKP 553
            DFGL+R +  A   +     A  + +M PE     + + ESDV+++G+V  EI      
Sbjct: 182 ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 241

Query: 554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR 613
             P        ++ +V D    G +L   +              L  +   C       R
Sbjct: 242 --PYYGMAHEEVIYYVRD----GNILACPE---------NCPLELYNLMRLCWSKLPADR 286

Query: 614 PSIRQVIHVL 623
           PS   +  +L
Sbjct: 287 PSFCSIHRIL 296

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (492), Expect = 1e-57
 Identities = 65/271 (23%), Positives = 105/271 (38%), Gaps = 21/271 (7%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHRN 410
            D++  Q LG+G +G V     R T   +AVK V         E    E+ I   L H N
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           +V+  G   E     L  E+   G L   +  +   +      +    L +G++YL    
Sbjct: 65  VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYL---H 120

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV-EHAKGSQTTVLAGTMGYMAPECATTG 529
              + HRDIK  N++LD   N KI DFGLA +   + +      + GT+ Y+APE     
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180

Query: 530 K-ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR 588
           +  ++  DV+S GIV   +  G  P +  +   Q        +        + +D     
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDWKEKKTYLNPWKKIDSA-PL 237

Query: 589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQV 619
                      +  +   +P    R +I  +
Sbjct: 238 AL---------LHKILVENPSA--RITIPDI 257

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (493), Expect = 2e-57
 Identities = 69/311 (22%), Positives = 118/311 (37%), Gaps = 43/311 (13%)

Query: 339 PKRFPY-KELALATNDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGSKQG 392
           P + PY  +     N  +  + LG G FG V +         +    +AVK +   +   
Sbjct: 9   PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 68

Query: 393 -IKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK-------- 442
             +   SE+K++S L  H N+V LLG C      L++ E+   G L + L +        
Sbjct: 69  EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 128

Query: 443 ---------ENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAK 493
                    +   L  E     +  +A G+ +L     +  +HRD+ + NI+L      K
Sbjct: 129 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITK 185

Query: 494 IGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRK 552
           I DFGLAR +++             + +MAPE       + ESDV+S+GI   E+     
Sbjct: 186 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 245

Query: 553 PINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENL 612
              P  P               + K  + +               +  +   C   D   
Sbjct: 246 SPYPGMPV--------------DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK 291

Query: 613 RPSIRQVIHVL 623
           RP+ +Q++ ++
Sbjct: 292 RPTFKQIVQLI 302

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  191 bits (487), Expect = 8e-57
 Identities = 64/300 (21%), Positives = 119/300 (39%), Gaps = 36/300 (12%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHR 409
           DF   + LG+G F  V       T+   A+K + +     +  +     E  ++SRL H 
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
             V+L     + ++L     +  NG L  ++ K  S      R+  A+     +  L+  
Sbjct: 69  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE----IVSALEYL 124

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH-AKGSQTTVLAGTMGYMAPECATT 528
             + ++HRD+K  NI+L+ + + +I DFG A+++   +K ++     GT  Y++PE  T 
Sbjct: 125 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 184

Query: 529 GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR 588
             A K SD+++ G +  ++  G  P            +     +       E   P+  R
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI-----IKLEYDFPEKFFPK-AR 238

Query: 589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHV-----------LNFEAPLPALPPKMP 637
           D     +E+L+         D   R    ++              + +E      PPK+ 
Sbjct: 239 DL----VEKLL-------VLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT 287

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  190 bits (484), Expect = 1e-56
 Identities = 62/277 (22%), Positives = 113/277 (40%), Gaps = 23/277 (8%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSY---IAVKRVSQGSKQGIKE-YASEVKIISRLR 407
                 + +G+G FG V++G +    +    +A+K     +   ++E +  E   + +  
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66

Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
           H ++V+L+G   E   + ++ E    G L S L      L        A  L++ L YL 
Sbjct: 67  HPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL- 124

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT 527
               +  VHRDI + N+++ SN   K+GDFGL+R +E +   + +     + +MAPE   
Sbjct: 125 --ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 182

Query: 528 TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC 587
             + +  SDV+ FG+   EI           P   V     +       ++       + 
Sbjct: 183 FRRFTSASDVWMFGVCMWEILMHGVK-----PFQGVKNNDVIG------RIENGERLPMP 231

Query: 588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
            +     +  LM     C   D + RP   ++   L+
Sbjct: 232 PNCP-PTLYSLM---TKCWAYDPSRRPRFTELKAQLS 264

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  192 bits (488), Expect = 2e-56
 Identities = 75/344 (21%), Positives = 131/344 (38%), Gaps = 58/344 (16%)

Query: 312 RKRKEGDEEDNQGFSEYIDDEFERGAGPKRFPY-KELALATNDFNDDQKLGQGGFGGVYK 370
           +  +     DN+ F  Y+D         + + Y  +      +    + LG G FG V  
Sbjct: 6   QMVQVTGSSDNEYF--YVD--------FREYEYDLKWEFPRENLEFGKVLGSGAFGKVMN 55

Query: 371 GFFRETNS-----YIAVKRVSQGSKQG-IKEYASEVKIISRL-RHRNLVQLLGWCHEKKE 423
                 +       +AVK + + +     +   SE+K++++L  H N+V LLG C     
Sbjct: 56  ATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 115

Query: 424 LLLVYEFMPNGSLDSHLFKEN----------------------SLLTWEFRYKIAQDLAS 461
           + L++E+   G L ++L  +                       ++LT+E     A  +A 
Sbjct: 116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAK 175

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR-LVEHAKGSQTTVLAGTMGY 520
           G+ +L+    +  VHRD+ + N+++      KI DFGLAR ++  +           + +
Sbjct: 176 GMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKW 232

Query: 521 MAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE 580
           MAPE    G  + +SDV+S+GI+  EI        P  P                    +
Sbjct: 233 MAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN--------------FYK 278

Query: 581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
            +      D      E + I+   C   D   RPS   +   L 
Sbjct: 279 LIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (477), Expect = 1e-55
 Identities = 68/280 (24%), Positives = 109/280 (38%), Gaps = 26/280 (9%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNS---YIAVKRVSQ---GSKQGIKEYASEVKIISR 405
            D    +KLG G FG V +G +   +     +AVK +        + + ++  EV  +  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
           L HRNL++L G       + +V E  P GSL   L K           + A  +A G+ Y
Sbjct: 68  LDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVE--HAKGSQTTVLAGTMGYMAP 523
           L     +  +HRD+ + N++L +    KIGDFGL R +                  + AP
Sbjct: 127 L---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183

Query: 524 ECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD 583
           E   T   S  SD + FG+   E+    +      P   ++  Q +  +   G+ L    
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQE-----PWIGLNGSQILHKIDKEGERLP--R 236

Query: 584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVL 623
           P  C        + +  V + C       RP+   +   L
Sbjct: 237 PEDC-------PQDIYNVMVQCWAHKPEDRPTFVALRDFL 269

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  190 bits (484), Expect = 2e-55
 Identities = 61/322 (18%), Positives = 129/322 (40%), Gaps = 28/322 (8%)

Query: 325 FSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKR 384
           + ++ +D +++   P+    K+ ++  + ++  ++LG G FG V++   + T      K 
Sbjct: 4   YDKFYEDIWKK-YVPQPVEVKQGSV-YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKF 61

Query: 385 VSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKEN 444
           ++           +E+ I+++L H  L+ L     +K E++L+ EF+  G L   +  E+
Sbjct: 62  INTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAED 121

Query: 445 SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA--KIGDFGLARL 502
             ++        +    GL ++    E  +VH DIK  NIM ++   +  KI DFGLA  
Sbjct: 122 YKMSEAEVINYMRQACEGLKHM---HEHSIVHLDIKPENIMCETKKASSVKIIDFGLATK 178

Query: 503 VEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ 562
           +         V   T  + APE          +D+++ G++   +  G  P   +     
Sbjct: 179 LNP--DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET 236

Query: 563 VSLLQWVWDLYGNGKLLEAVDPRL---CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQV 619
           +  +        + +  E     +    +DF    I+ L+         +   R ++   
Sbjct: 237 LQNV-----KRCDWEFDEDAFSSVSPEAKDF----IKNLL-------QKEPRKRLTVHDA 280

Query: 620 IHVLNFEAPLPALPPKMPVPTY 641
           +     +     L  ++P   Y
Sbjct: 281 LEHPWLKGDHSNLTSRIPSSRY 302

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (458), Expect = 2e-52
 Identities = 77/312 (24%), Positives = 132/312 (42%), Gaps = 48/312 (15%)

Query: 328 YIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAV 382
           Y+ DE+E              +A       ++LGQG FG VY+G  +     E  + +A+
Sbjct: 10  YVPDEWE--------------VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAI 55

Query: 383 KRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF 441
           K V++  S +   E+ +E  ++      ++V+LLG   + +  L++ E M  G L S+L 
Sbjct: 56  KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 115

Query: 442 ---------KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA 492
                       +  +     ++A ++A G+ YL        VHRD+ + N M+  +F  
Sbjct: 116 SLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTV 172

Query: 493 KIGDFGLARLV-EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR 551
           KIGDFG+ R + E     +       + +M+PE    G  +  SDV+SFG+V  EIA   
Sbjct: 173 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 232

Query: 552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDEN 611
           +              + V      G LL+  D            + L  +   C   +  
Sbjct: 233 EQPYQGLSN------EQVLRFVMEGGLLDKPDNCP---------DMLFELMRMCWQYNPK 277

Query: 612 LRPSIRQVIHVL 623
           +RPS  ++I  +
Sbjct: 278 MRPSFLEIISSI 289

>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 232

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Peanut (Arachis hypogaea) [TaxId: 3818]

 Score =  177 bits (450), Expect = 3e-52
 Identities = 90/239 (37%), Positives = 119/239 (49%), Gaps = 15/239 (6%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL--PANRETAGRATYNQSMRLWDKAT 88
           A  ++FN+ SFS   +  I ++      SN  IQL       + GR  Y   +R+W  AT
Sbjct: 1   AETVSFNFNSFSE-GNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSAT 59

Query: 89  GNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIP 148
           GN+  F T FSF +        ADG+ FF+AP+ ++IP    GG      D      +  
Sbjct: 60  GNVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDT---KGAGH 116

Query: 149 FVAVEFDVYVNSW--DPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNL 206
           FV VEFD Y NS   DP   HVGID+NSV S K V W  +  SG   +  + Y+SST  L
Sbjct: 117 FVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPW--NSVSGAVVKVTVIYDSSTKTL 174

Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDF-AIFSIYSWEFNSSLE 264
           SVA T    ++     +   VDL+  LPE V FGFS +  +    I  I SW F S+L 
Sbjct: 175 SVAVTNDNGDITT---IAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLI 230

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  179 bits (455), Expect = 5e-52
 Identities = 59/282 (20%), Positives = 114/282 (40%), Gaps = 23/282 (8%)

Query: 344 YKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKI 402
           +K+     + ++    LG G F  V     + T   +A+K +++ + +G +    +E+ +
Sbjct: 1   WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 60

Query: 403 ISRLRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASG 462
           + +++H N+V L         L L+ + +  G L   +  E    T     ++   +   
Sbjct: 61  LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTERDASRLIFQVLDA 119

Query: 463 LLYLQEEWEQCVVHRDIKSSNIML---DSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMG 519
           + YL    +  +VHRD+K  N++    D +    I DFGL+++ +   GS  +   GT G
Sbjct: 120 VKYL---HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED--PGSVLSTACGTPG 174

Query: 520 YMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL 579
           Y+APE       SK  D +S G++A  + CG  P   +        +     L    +  
Sbjct: 175 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQI-----LKAEYEFD 229

Query: 580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIH 621
                 +          +  I  L    P++  R +  Q + 
Sbjct: 230 SPYWDDISDSA------KDFIRHLMEKDPEK--RFTCEQALQ 263

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (454), Expect = 6e-52
 Identities = 68/298 (22%), Positives = 130/298 (43%), Gaps = 43/298 (14%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETN-------SYIAVKRV-SQGSKQGIKEYASEVKII 403
           +     + LG+G FG V        +       + +AVK + S  +++ + +  SE++++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 404 SRL-RHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLF---------------KENSLL 447
             + +H+N++ LLG C +   L ++ E+   G+L  +L                     L
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 132

Query: 448 TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK 507
           + +     A  +A G+ YL     +  +HRD+ + N+++  +   KI DFGLAR + H  
Sbjct: 133 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189

Query: 508 GSQTT-VLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL 566
             + T      + +MAPE       + +SDV+SFG++  EI        P  P      +
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------V 243

Query: 567 QWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
           + ++ L   G  ++   P  C          L ++   C H   + RP+ +Q++  L+
Sbjct: 244 EELFKLLKEGHRMD--KPSNC-------TNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292

>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Length = 236

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

 Score =  176 bits (446), Expect = 2e-51
 Identities = 80/242 (33%), Positives = 125/242 (51%), Gaps = 18/242 (7%)

Query: 34  ALTFNYTSFSPQYDDNITYERAYPDSNRVIQL-------PANRETAGRATYNQSMRLWDK 86
           +++F + +F    +D+I ++     +   +QL          + +AGRA Y+  ++LWD 
Sbjct: 1   SVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDN 60

Query: 87  ATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSS 146
            T ++  F T F+F +     +  ADGLAFFLAP  S +     G   GL   +     S
Sbjct: 61  KTESVASFYTEFTFFLKI-TGNGPADGLAFFLAPPDSDVKD--AGEYLGLFNKSTATQPS 117

Query: 147 I-PFVAVEFDVYVNS--WDPTFSHVGIDINSVKSKKNVSW-WSDVKSGRRNEAWISYNSS 202
               VAVEFD + N    +P++ H+GI++NS+ S     W  SD+ SG+   A ISY+ S
Sbjct: 118 KNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKRWEDSDIFSGKIATARISYDGS 177

Query: 203 THNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD-FAIFSIYSWEFNS 261
              L+V  +    +  +   L + VD+RQ+LPE V  G S +TG + F    I SW F+S
Sbjct: 178 AEILTVVLSYPDGSDYI---LSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFSS 234

Query: 262 SL 263
           +L
Sbjct: 235 NL 236

>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-II [TaxId: 3902]

 Score =  175 bits (445), Expect = 2e-51
 Identities = 89/243 (36%), Positives = 128/243 (52%), Gaps = 16/243 (6%)

Query: 32  ASALTFNYTSFSPQYDDNITYERAYPDSNRVIQL-PANRET---AGRATYNQSMRLWDKA 87
           +  L+FN+  F P   + I    A   +  V+Q+   ++ T    GRA Y   +++WD  
Sbjct: 1   SDDLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSI 60

Query: 88  TGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSI 147
           TG +  F T FSFV+ +  S    DGLAFFLAP  S+IP+    G FGL   ++   SS 
Sbjct: 61  TGKVASFATSFSFVVKADKSDG-VDGLAFFLAPANSQIPSGSSAGMFGLFSSSDS-KSSN 118

Query: 148 PFVAVEFDVYVNS----WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSST 203
             +AVEFD Y       WDP F H+GID+NS+KS K V W  D ++G   +  I+Y + T
Sbjct: 119 QIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVKW--DWRNGEVADVVITYRAPT 176

Query: 204 HNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATG--VDFAIFSIYSWEFNS 261
            +L+V  +   +       +   VDL+  LPE+V+ GFS   G   +F    + SW F S
Sbjct: 177 KSLTVCLSYPSDG--TSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYFTS 234

Query: 262 SLE 264
           +LE
Sbjct: 235 NLE 237

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (446), Expect = 2e-50
 Identities = 55/297 (18%), Positives = 104/297 (35%), Gaps = 31/297 (10%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           + LG+G FG V++     +      K V             E+ I++  RHRN++ L   
Sbjct: 11  EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHES 69

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
               +EL++++EF+    +   +      L           +   L +L       + H 
Sbjct: 70  FESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFL---HSHNIGHF 126

Query: 478 DIKSSNIMLDSNFNA--KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKES 535
           DI+  NI+  +  ++  KI +FG AR ++   G    +L     Y APE       S  +
Sbjct: 127 DIRPENIIYQTRRSSTIKIIEFGQARQLKP--GDNFRLLFTAPEYYAPEVHQHDVVSTAT 184

Query: 536 DVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL---CRDFDG 592
           D++S G +   +  G  P   +  Q  +  +     +       E     +     DF  
Sbjct: 185 DMWSLGTLVYVLLSGINPFLAETNQQIIENI-----MNAEYTFDEEAFKEISIEAMDF-- 237

Query: 593 QQIERLMIVGLWCAHPDENLRPSIRQVI-HVL---NFEAPLPALPPKMPVPTYLSPP 645
             ++RL+         +   R +  + + H       E     +   +    Y    
Sbjct: 238 --VDRLL-------VKERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHRRYYHTL 285

>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Length = 239

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

 Score =  172 bits (438), Expect = 3e-50
 Identities = 72/243 (29%), Positives = 114/243 (46%), Gaps = 19/243 (7%)

Query: 33  SALTFNYTSFSPQYDDNITYERAYPDSNRVIQL-------PANRETAGRATYNQSMRLWD 85
             ++F+++ F P  D+      A    + V+QL           ++ GR  Y + + +WD
Sbjct: 2   ETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWD 61

Query: 86  KATGNLTDFTTHFSFVIDS-RNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN 144
             TG +  F T FSF I+        ADGL FF+ P  SK     G G  G+  +++  N
Sbjct: 62  STTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQ--GYGYLGVFNNSKQDN 119

Query: 145 SSIPFVAVEFDVYVNS-WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSST 203
           S    +AVEFD + N    P   H+GID+NS++S K   +   + +G+     I Y++ +
Sbjct: 120 SY-QTLAVEFDTFSNPWDPPQVPHIGIDVNSIRSIKTQPF--QLDNGQVANVVIKYDAPS 176

Query: 204 HNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS---IYSWEFN 260
             L V       +   +  +   VD++Q LP++V  G S ATG          +YSW F 
Sbjct: 177 KILHVVLVY--PSSGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQ 234

Query: 261 SSL 263
           +SL
Sbjct: 235 ASL 237

>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Length = 240

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]

 Score =  171 bits (434), Expect = 8e-50
 Identities = 79/244 (32%), Positives = 114/244 (46%), Gaps = 17/244 (6%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQLPANRE-----TAGRATYNQSMRLWD 85
           +  L+F + +FS     +++++  A      V+QL          T G A Y   + +W+
Sbjct: 1   SDDLSFKFKNFSQN-GKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWN 59

Query: 86  KATGNLTDFTTHFSF-VIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN 144
             TG L  F T FSF +  S N     DGL FFLAP     P  + GG FGL  D +  +
Sbjct: 60  CNTGELASFITSFSFFMETSANPKAATDGLTFFLAP--PDSPLRRAGGYFGLFNDTKC-D 116

Query: 145 SSIPFVAVEFDVYVNS---WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNS 201
           SS   VAVEFD   +    WDP F H+GID+N VKS     W             I Y +
Sbjct: 117 SSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERWNKRYGLNNVANVEIIYEA 176

Query: 202 STHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDF-AIFSIYSWEFN 260
           S+  L+ + T   +       +   VDL++ LPE+V+ GFS +T +   A   + +W F 
Sbjct: 177 SSKTLTASLTYPSDQ--TSISVTSIVDLKEILPEWVSVGFSGSTYIGRQATHEVLNWYFT 234

Query: 261 SSLE 264
           S+  
Sbjct: 235 STFI 238

>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Length = 251

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  171 bits (434), Expect = 1e-49
 Identities = 83/255 (32%), Positives = 124/255 (48%), Gaps = 18/255 (7%)

Query: 32  ASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRE-------TAGRATYNQSMRLW 84
           A  ++F++  F P+  + I    A   S+  +QL    E       + GRA Y+  + +W
Sbjct: 1   AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIW 60

Query: 85  DKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN 144
           DK TG++  F   F+F   + ++   ADGLAFFLAP  +        G  GL  +N    
Sbjct: 61  DKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDT--KPQTHAGYLGLFNEN---E 115

Query: 145 SSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTH 204
           S    VAVEFD + NSWDP   H+GI++NS++S K  SW  D+ + +  +  I+Y++ST 
Sbjct: 116 SGDQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSW--DLANNKVAKVLITYDASTS 173

Query: 205 NLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATG--VDFAIFSIYSWEFNSS 262
            L  +             L   VDL+  LPE+V  GFS ATG  +      + SW F S+
Sbjct: 174 LLVASLVYPSQR--TSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASN 231

Query: 263 LEMDDETTNPVSNPK 277
           L       +P+    
Sbjct: 232 LPHASSNIDPLDLTS 246

>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]

 Score =  169 bits (430), Expect = 3e-49
 Identities = 89/244 (36%), Positives = 123/244 (50%), Gaps = 26/244 (10%)

Query: 35  LTFNYTSFSPQYDDNITYER-AYPDSNRVIQLPANRE------TAGRATYNQSMRLWDKA 87
           ++FN+  F    ++ +  +R A   SN V++L           + GRA Y + +++WD  
Sbjct: 3   ISFNFNQFHQN-EEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDST 61

Query: 88  TGNLTDFTTHFSFVIDS-RNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSS 146
           TGN+  F T FSF I       + ADGL FF+AP      T +GGG FG+        S 
Sbjct: 62  TGNVASFETRFSFSIRQPFPRPHPADGLVFFIAP--PNTQTGEGGGYFGIYNPL----SP 115

Query: 147 IPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNL 206
            PFVAVEFD + N+WDP   H+GID+NSV S K V +   + +G      I Y++ST  L
Sbjct: 116 YPFVAVEFDTFRNTWDPQIPHIGIDVNSVISTKTVPFT--LDNGGIANVVIKYDASTKIL 173

Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATG-------VDFAIFSIYSWEF 259
            V       +L  +  +   VDL+Q LPE V  GFS ATG              I SW F
Sbjct: 174 HVVLVF--PSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWSF 231

Query: 260 NSSL 263
           ++SL
Sbjct: 232 SASL 235

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (434), Expect = 4e-49
 Identities = 72/297 (24%), Positives = 124/297 (41%), Gaps = 41/297 (13%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGSKQG-IKEYASEVKIISR 405
           +     + LG+G FG V +          T   +AVK + +G+     +   SE+KI+  
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 406 -LRHRNLVQLLGWCHEKKE-LLLVYEFMPNGSLDSHLFKEN---------------SLLT 448
              H N+V LLG C +    L+++ EF   G+L ++L  +                  LT
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132

Query: 449 WEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV-EHAK 507
            E     +  +A G+ +L     +  +HRD+ + NI+L      KI DFGLAR + +   
Sbjct: 133 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 189

Query: 508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQ 567
             +       + +MAPE       + +SDV+SFG++  EI           P   V + +
Sbjct: 190 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDE 244

Query: 568 WVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
                   G  + A       D+   ++ + M   L C H + + RP+  +++  L 
Sbjct: 245 EFCRRLKEGTRMRAP------DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLG 292

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  170 bits (432), Expect = 4e-49
 Identities = 59/284 (20%), Positives = 112/284 (39%), Gaps = 35/284 (12%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVS---------QGSKQGIKEYASEVKII 403
           ++   + LG+G    V +   + T    AVK +          +  ++  +    EV I+
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 404 SRLR-HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASG 462
            ++  H N++QL           LV++ M  G L  +L  E   L+ +   KI + L   
Sbjct: 64  RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEV 122

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
           +  L    +  +VHRD+K  NI+LD + N K+ DFG +  ++   G +   + GT  Y+A
Sbjct: 123 ICAL---HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP--GEKLREVCGTPSYLA 177

Query: 523 PECATTGKA------SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNG 576
           PE              KE D++S G++   +  G  P   +     + ++     + GN 
Sbjct: 178 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI-----MSGNY 232

Query: 577 KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
           +                   + ++       P +  R +  + +
Sbjct: 233 QFGSPEWDDYSDTV------KDLVSRFLVVQPQK--RYTAEEAL 268

>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Length = 253

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

 Score =  169 bits (430), Expect = 4e-49
 Identities = 81/253 (32%), Positives = 130/253 (51%), Gaps = 22/253 (8%)

Query: 32  ASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRE-------TAGRATYNQSMRLW 84
           A   +F++ +F+     +   +     S+  ++L   +        + GRA Y+  ++++
Sbjct: 1   ADIQSFSFKNFNS---SSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIY 57

Query: 85  DKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN 144
           DK+TG +  + T F+  I + N S  ADG+AF L P GS+  +N   G  G+   +   N
Sbjct: 58  DKSTGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSN--SGFLGVFDSDVYDN 115

Query: 145 SSIPFVAVEFDVYVNS-WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSST 203
           S+   VAVEFD + N+ WDPT  H+GID+NS+KS +  SW   + +G+  E  I+YN++T
Sbjct: 116 SA-QTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASW--GLANGQNAEILITYNAAT 172

Query: 204 HNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS---IYSWEFN 260
             L  +             +  +VD+   LPE+V+ GFS  TG+         + SW F 
Sbjct: 173 SLLVASLVHPSRR--TSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFA 230

Query: 261 SSLEMDDETTNPV 273
           S L  DD TT P+
Sbjct: 231 SKLP-DDSTTEPL 242

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  169 bits (430), Expect = 8e-49
 Identities = 57/283 (20%), Positives = 107/283 (37%), Gaps = 27/283 (9%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLR 407
           ++ +   + LG GG   V+       +  +AVK +             +  E +  + L 
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 408 HRNLVQLLGWCHEKKE----LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGL 463
           H  +V +      +        +V E++   +L   +  E  + T +   ++  D    L
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-TPKRAIEVIADACQAL 124

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV--EHAKGSQTTVLAGTMGYM 521
            +     +  ++HRD+K +NIM+ +    K+ DFG+AR +       +QT  + GT  Y+
Sbjct: 125 NFS---HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 181

Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA 581
           +PE A        SDVYS G V  E+  G  P    +P            +  +     A
Sbjct: 182 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH-----VREDPIPPSA 236

Query: 582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRP-SIRQVIHVL 623
               L  D         +++     +P+   R  +  ++   L
Sbjct: 237 RHEGLSADL------DAVVLKALAKNPEN--RYQTAAEMRADL 271

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  172 bits (436), Expect = 1e-48
 Identities = 66/274 (24%), Positives = 114/274 (41%), Gaps = 28/274 (10%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLR- 407
           NDF+  + +G+GGFG VY     +T    A+K + +     KQG     +E  ++S +  
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 408 --HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
                +V +    H   +L  + + M  G L  HL  ++ + +       A ++  GL +
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEH 122

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPEC 525
           +     + VV+RD+K +NI+LD + + +I D GLA         +     GT GYMAPE 
Sbjct: 123 M---HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK---KKPHASVGTHGYMAPEV 176

Query: 526 ATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP 584
              G A    +D +S G +  ++  G  P      + +  + +         +L ++  P
Sbjct: 177 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--MAVELPDSFSP 234

Query: 585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQ 618
              R      +E L+         D N R     
Sbjct: 235 E-LRSL----LEGLL-------QRDVNRRLGCLG 256

>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Length = 234

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]

 Score =  167 bits (425), Expect = 1e-48
 Identities = 79/242 (32%), Positives = 115/242 (47%), Gaps = 23/242 (9%)

Query: 35  LTFNYTSFSPQYDDNITYERAYPDSNRVIQL-------PANRETAGRATYNQSMRLWDKA 87
            +FN+  F     +     +A   SN V++L           ++ GRA Y + +++WD  
Sbjct: 3   QSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDST 62

Query: 88  TGNLTDFTTHFSFVIDSRNS-SYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSS 146
           TGN+  F T FSF I    +    ADGL FF+ P  S  P  + GG+ G+ K        
Sbjct: 63  TGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNS--PQGEDGGNLGVFKPP----EG 116

Query: 147 IPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNL 206
               AVEFD + N+WDP   H+GID+NS+ S K + +   +++G      I Y+S T  L
Sbjct: 117 DNAFAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHF--QLENGGVANVVIKYDSPTKIL 174

Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLP--EFVTFGFSMATGVDFAIFS---IYSWEFNS 261
           +V      +++  +  L   VDL+Q  P  E+V  G S  TG          I SW F S
Sbjct: 175 NVVLAF--HSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTS 232

Query: 262 SL 263
           SL
Sbjct: 233 SL 234

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (432), Expect = 1e-48
 Identities = 64/273 (23%), Positives = 115/273 (42%), Gaps = 26/273 (9%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISR-LR 407
            DF   + LG+G FG V+   F++TN + A+K + +        ++    E +++S    
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ 467
           H  L  +      K+ L  V E++  G L  H+ +             A ++  GL +L 
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSRATFYAAEIILGLQFL- 119

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT 527
               + +V+RD+K  NI+LD + + KI DFG+ +          T   GT  Y+APE   
Sbjct: 120 --HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTF-CGTPDYIAPEILL 176

Query: 528 TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC 587
             K +   D +SFG++  E+  G+ P + +  +       +      N      ++    
Sbjct: 177 GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE-----LFHSIRMDNPFYPRWLEKE-A 230

Query: 588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
           +D          +V L+   P++  R  +R  I
Sbjct: 231 KDL---------LVKLFVREPEK--RLGVRGDI 252

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  169 bits (428), Expect = 3e-48
 Identities = 67/305 (21%), Positives = 115/305 (37%), Gaps = 33/305 (10%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-----SEVKIISRLRHRNLV 412
             LG+G F  VYK   + TN  +A+K++  G +   K+        E+K++  L H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 413 QLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQ 472
            LL     K  + LV++FM        +   + +LT             GL YL    + 
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEV-IIKDNSLVLTPSHIKAYMLMTLQGLEYL---HQH 119

Query: 473 CVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKA- 531
            ++HRD+K +N++LD N   K+ DFGLA+       + T     T  Y APE     +  
Sbjct: 120 WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQ-VVTRWYRAPELLFGARMY 178

Query: 532 SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD 591
               D+++ G +  E+      +   +   Q++ +         G   E   P +C   D
Sbjct: 179 GVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRI-----FETLGTPTEEQWPDMCSLPD 233

Query: 592 GQQIERLMIVGL----------------WCAHPDENLRPSIRQVI-HVLNFEAPLPALPP 634
               +    + L                     +   R +  Q +        P P    
Sbjct: 234 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGC 293

Query: 635 KMPVP 639
           ++P P
Sbjct: 294 QLPRP 298

>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 233

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score =  165 bits (419), Expect = 1e-47
 Identities = 84/244 (34%), Positives = 122/244 (50%), Gaps = 24/244 (9%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL-------PANRETAGRATYNQSMRL 83
           ++ + FN+  F+     N+  +R A   S+  ++L            + GRA Y+  +++
Sbjct: 1   SNDIYFNFQRFNE---TNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQI 57

Query: 84  WDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPL 143
           WD  TG +  F T F+F I   N++  ADGLAF L P GS       GG  GL   +   
Sbjct: 58  WDNTTGTVASFATSFTFNIQVPNNAGPADGLAFALVPVGS--QPKDKGGFLGLFDGS--- 112

Query: 144 NSSIPFVAVEFDVYVNS-WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSS 202
           NS+   VAVEFD   N  WDPT  H+GID+NS++S K   W  D  +G   E  I+Y+SS
Sbjct: 113 NSNFHTVAVEFDTLYNKDWDPTERHIGIDVNSIRSIKTTRW--DFVNGENAEVLITYDSS 170

Query: 203 THNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV---DFAIFSIYSWEF 259
           T+ L  +          +  +   VDL+  LPE+V+ GFS  TG+   +     + SW F
Sbjct: 171 TNLLVASLVYPSQKTSFI--VSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSF 228

Query: 260 NSSL 263
            S L
Sbjct: 229 ASKL 232

>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Length = 233

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]

 Score =  164 bits (415), Expect = 3e-47
 Identities = 84/239 (35%), Positives = 125/239 (52%), Gaps = 18/239 (7%)

Query: 34  ALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRE------TAGRATYNQSMRLWDKA 87
           + +F++T+F+P  ++ I  E A  +S   ++L A         + GRA Y   + + D  
Sbjct: 3   STSFSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDN- 61

Query: 88  TGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSI 147
              L  FTT FSFV+ +  ++  ADGLAFFLAP  ++      GG  GL  D    ++S 
Sbjct: 62  -TTLASFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQPQAR--GGFLGLFADRAH-DASY 117

Query: 148 PFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLS 207
             VAVEFD Y N+WDP ++H+GID N ++SKK   +  D+  G +    I+Y +ST  L+
Sbjct: 118 QTVAVEFDTYSNAWDPNYTHIGIDTNGIESKKTTPF--DMVYGEKANIVITYQASTKALA 175

Query: 208 VAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS---IYSWEFNSSL 263
            +             +  +VDLR  LPE+V  GFS  TG++  +     I SW F  SL
Sbjct: 176 ASLVF--PVSQTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWSFAVSL 232

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (416), Expect = 1e-46
 Identities = 67/298 (22%), Positives = 117/298 (39%), Gaps = 22/298 (7%)

Query: 353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRN 410
           +F   +K+G+G +G VYK   + T   +A+K++     ++        E+ ++  L H N
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW 470
           +V+LL   H + +L LV+EF+             + +           L  GL +     
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC---H 119

Query: 471 EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE-CATTG 529
              V+HRD+K  N+++++    K+ DFGLAR          T    T+ Y APE      
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 178

Query: 530 KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL--------QWVWDLYGNGKLLEA 581
             S   D++S G +  E+   R      +   Q+  +        + VW    +    + 
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238

Query: 582 VDPRLCRDFDGQQIERLMIVGL----WCAHPDENLRPSIRQVIH---VLNFEAPLPAL 632
             P+  R    + +  L   G        H D N R S +  +      +   P+P L
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296

>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 226

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score =  161 bits (409), Expect = 2e-46
 Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 27/242 (11%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL----PANRETAGRATYNQSMRLWDK 86
           ++  +FN  +F+     N+  +  A   S   + L        ++ GRA Y+  +++ D+
Sbjct: 1   SNDASFNVETFNK---TNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDR 57

Query: 87  ATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSS 146
              NL  F+T+F+F I+++N    A GLAF L P GS       G   GL          
Sbjct: 58  TIDNLASFSTNFTFRINAKNIENSAYGLAFALVPVGS--RPKLKGRYLGL---------- 105

Query: 147 IPFVAVEFDVYVNS--WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTH 204
                 + D +  +  +D   + + ID+NS++     S      +G + E  I+Y+S  +
Sbjct: 106 FNTTNYDRDAHTVAVVFDTVSNRIEIDVNSIRPIATESCNFGHNNGEKAEVRITYDSPKN 165

Query: 205 NLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS---IYSWEFNS 261
           +L V+      +      +   V L + + ++V+ GFS  +G          + SW F+S
Sbjct: 166 DLRVSLLY--PSSEEKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWSFSS 223

Query: 262 SL 263
           + 
Sbjct: 224 NF 225

>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Length = 239

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Maackia amurensis, leukoagglutinin [TaxId: 37501]

 Score =  162 bits (410), Expect = 2e-46
 Identities = 83/244 (34%), Positives = 120/244 (49%), Gaps = 17/244 (6%)

Query: 32  ASALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRE------TAGRATYNQSMRLWD 85
           +  L+F   +F P   D +    A   S  V+QL           + GRA Y   +R+W 
Sbjct: 1   SDELSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWG 60

Query: 86  KATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNS 145
             TG++  F+T F+FV+ + N    +DGLAF+LAP  S+IP+       GL  ++   +S
Sbjct: 61  NTTGSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSNS-DS 119

Query: 146 SIPFVAVEFDVYVNS----WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNS 201
           S   VAVEFD Y       WDP + H+GID+N ++S K V W  D  +G    A I+Y +
Sbjct: 120 SNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQW--DWINGGVAFATITYLA 177

Query: 202 STHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV--DFAIFSIYSWEF 259
               L  +     N       +   VDL++ LPE+V  GFS ATG   +     + SW F
Sbjct: 178 PNKTLIASLVYPSNQTTFS--VAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWSF 235

Query: 260 NSSL 263
            S+L
Sbjct: 236 TSTL 239

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (412), Expect = 3e-46
 Identities = 61/281 (21%), Positives = 101/281 (35%), Gaps = 43/281 (15%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQ------GSKQGIKEYASEVKIISR 405
           + +     LG GGFG VY G     N  +A+K V +      G          EV ++ +
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63

Query: 406 LR--HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGL 463
           +      +++LL W       +L+ E             E   L  E        +   +
Sbjct: 64  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSN-FNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMA 522
            +        V+HRDIK  NI++D N    K+ DFG   L++    +  T   GT  Y  
Sbjct: 124 RHC---HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDFDGTRVYSP 177

Query: 523 PECATTGKA-SKESDVYSFGIVALEIACGRKPI--NPKAPQGQVSLLQWVWDLYGNGKLL 579
           PE     +   + + V+S GI+  ++ CG  P   + +  +GQV   Q V          
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV---------- 227

Query: 580 EAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
                  C+      I   +           + RP+  ++ 
Sbjct: 228 ----SSECQHL----IRWCL-------ALRPSDRPTFEEIQ 253

>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Black locust (Robinia pseudoacacia) [TaxId: 35938]

 Score =  161 bits (408), Expect = 3e-46
 Identities = 88/241 (36%), Positives = 125/241 (51%), Gaps = 17/241 (7%)

Query: 33  SALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRE------TAGRATYNQSMRLWDK 86
            +L+F++  F+P     I    A   S  V+QL           + GRA Y    ++WD 
Sbjct: 2   GSLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDS 61

Query: 87  ATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSS 146
            TGN+  F T F+F+I + N +  ADGLAFFLAP  +       GG  G+ KD    N S
Sbjct: 62  TTGNVASFVTSFTFIIQAPNPATTADGLAFFLAPVDT--QPLDLGGMLGIFKDGYF-NKS 118

Query: 147 IPFVAVEFDVYVNS-WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHN 205
              VAVEFD + N  WDP   H+GI++NS++S K V W  +  +G     +ISY +ST +
Sbjct: 119 NQIVAVEFDTFSNGDWDPKGRHLGINVNSIESIKTVPW--NWTNGEVANVFISYEASTKS 176

Query: 206 LSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS---IYSWEFNSS 262
           L+ +      +L     +D  VD++  LPE+V FGFS  TG+D        + SW F S+
Sbjct: 177 LTASLVY--PSLETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFESN 234

Query: 263 L 263
           L
Sbjct: 235 L 235

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  163 bits (413), Expect = 5e-46
 Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 29/274 (10%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRH 408
            DF   + LG G FG V+    R    Y A+K + +      + ++    E  ++S + H
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
             ++++ G   + +++ ++ +++  G L S L K         ++  A+      L L+ 
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAE----VCLALEY 119

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT 528
              + +++RD+K  NI+LD N + KI DFG A+ V       T  L GT  Y+APE  +T
Sbjct: 120 LHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP----DVTYTLCGTPDYIAPEVVST 175

Query: 529 GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR 588
              +K  D +SFGI+  E+  G  P            +     L    +     +    +
Sbjct: 176 KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI-----LNAELRFPPFFNED-VK 229

Query: 589 DFDGQQIERLMIVGLWCAHPDE---NLRPSIRQV 619
           D          +  L      +   NL+     V
Sbjct: 230 DL---------LSRLITRDLSQRLGNLQNGTEDV 254

>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Length = 241

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]

 Score =  160 bits (406), Expect = 7e-46
 Identities = 81/243 (33%), Positives = 126/243 (51%), Gaps = 19/243 (7%)

Query: 34  ALTFNYTSFSPQYDDNITYERAYPDSNRVIQLPANRE-------TAGRATYNQSMRLWDK 86
           +L+F + +F      N+ ++      N  +QL            T GR  ++  + LW+K
Sbjct: 3   SLSFGFPTFPS-DQKNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEK 61

Query: 87  ATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSS 146
           ++  + +F + FSF + S  S+  ADG+AFF+AP  + IP+  GGG  GL       N+S
Sbjct: 62  SSSRVANFQSQFSFSLKSPLSN-GADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTS 120

Query: 147 I-PFVAVEFDVYVNS----WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNS 201
               +AVEFD +       WDP + H+GID+NS++S K V W  D + G+     +++N 
Sbjct: 121 ANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVKW--DRRDGQSLNVLVTFNP 178

Query: 202 STHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNS 261
           ST NL V  T           + Y+VD+R  LPE+V  GFS A+G  +   ++ SW F S
Sbjct: 179 STRNLDVVATYSDGTRYE---VSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWSFTS 235

Query: 262 SLE 264
           +L 
Sbjct: 236 TLL 238

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (409), Expect = 1e-45
 Identities = 60/280 (21%), Positives = 112/280 (40%), Gaps = 29/280 (10%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYAS------EVKIISR 405
           + ++  ++LG G F  V K   + T    A K + +   +  +   S      EV I+  
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69

Query: 406 LRHRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLY 465
           ++H N++ L      K +++L+ E +  G L   L ++ S LT E   +  + + +G   
Sbjct: 70  IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNG--- 125

Query: 466 LQEEWEQCVVHRDIKSSNIMLDSN----FNAKIGDFGLARLVEHAKGSQTTVLAGTMGYM 521
           +       + H D+K  NIML          KI DFGLA  ++   G++   + GT  ++
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GNEFKNIFGTPEFV 183

Query: 522 APECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA 581
           APE         E+D++S G++   +  G  P      Q  ++ +        N +  + 
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSA-----VNYEFEDE 238

Query: 582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIH 621
                          +  I  L    P +  R +I+  + 
Sbjct: 239 YFSNTSALA------KDFIRRLLVKDPKK--RMTIQDSLQ 270

>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Length = 228

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]

 Score =  158 bits (399), Expect = 5e-45
 Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 27/244 (11%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL-------PANRETAGRATYNQSMRL 83
           A+  +FN+ +F    DD +  +  A   S   +QL           ++ GRA Y+  +++
Sbjct: 1   ATETSFNFPNFHT--DDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQI 58

Query: 84  WDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPL 143
            D  + N+  F T+F+F+I ++N S  A GLAF L P  S  P  K     G+   N P 
Sbjct: 59  KD--SNNVASFNTNFTFIIRAKNQSISAYGLAFALVPVNS--PPQKKQEFLGIFNTNNP- 113

Query: 144 NSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSST 203
             +   VAV F+ + N  D        D N +K   N +      +G + +  I+Y+SS 
Sbjct: 114 EPNARTVAVVFNTFKNRID-------FDKNFIKPYVNENCDFHKYNGEKTDVQITYDSSN 166

Query: 204 HNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFS---IYSWEFN 260
           ++L V          V   +   V L + + E+V+ GFS  +G+         + SW F+
Sbjct: 167 NDLRVFLHF--TVSQVKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDVLSWSFS 224

Query: 261 SSLE 264
           S   
Sbjct: 225 SKFR 228

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  159 bits (402), Expect = 4e-44
 Identities = 64/330 (19%), Positives = 117/330 (35%), Gaps = 41/330 (12%)

Query: 336 GAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKE 395
           G GP R            + D + +G G FG VY+    ++   +A+K+V Q  +   + 
Sbjct: 11  GQGPDR-------PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR- 62

Query: 396 YASEVKIISRLRHRNLVQLLGWCHEKKE------LLLVYEFMPNGSLDS--HLFKENSLL 447
              E++I+ +L H N+V+L  + +   E      L LV +++P        H  +    L
Sbjct: 63  ---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 119

Query: 448 TWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSN-FNAKIGDFGLARLVEHA 506
              +       L   L Y+       + HRDIK  N++LD +    K+ DFG A+ +   
Sbjct: 120 PVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176

Query: 507 KGSQTTVLAGTMGYMAP-ECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSL 565
           + + + +   +  Y AP         +   DV+S G V  E+  G+      +   Q+  
Sbjct: 177 EPNVSYI--CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234

Query: 566 ------------LQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLR 613
                       ++ +   Y   K  +       + F  +     + +           R
Sbjct: 235 IIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294

Query: 614 PSIRQVIH---VLNFEAPLPALPPKMPVPT 640
            +  +            P   LP     P 
Sbjct: 295 LTPLEACAHSFFDELRDPNVKLPNGRDTPA 324

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (398), Expect = 5e-44
 Identities = 60/292 (20%), Positives = 107/292 (36%), Gaps = 26/292 (8%)

Query: 350 ATNDFNDDQKLGQGGFGGVYKGFFRET-NSYIAVKRVS-----QGSKQGIKEYASEVKII 403
           A   +    ++G+G +G V+K    +    ++A+KRV      +G         + ++ +
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 404 SRLRHRNLVQLLGWCHEKKE-----LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQD 458
               H N+V+L   C   +      L LV+E +               +  E    +   
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 124

Query: 459 LASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTM 518
           L  GL +L       VVHRD+K  NI++ S+   K+ DFGLAR+        + V   T+
Sbjct: 125 LLRGLDFL---HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV--VTL 179

Query: 519 GYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL----------QW 568
            Y APE       +   D++S G +  E+   +      +   Q+  +           W
Sbjct: 180 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 239

Query: 569 VWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
             D+    +   +   +    F     E    + L C   +   R S    +
Sbjct: 240 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 291

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (401), Expect = 5e-44
 Identities = 69/276 (25%), Positives = 110/276 (39%), Gaps = 23/276 (8%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRH 408
           NDF+  + LG+G FG V     + T  Y A+K + +    +K  +    +E +++   RH
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 409 RNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQE 468
             L  L         L  V E+   G L  HL +E        R+  A+     +  L+ 
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE----IVSALEY 120

Query: 469 EWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATT 528
              + VV+RDIK  N+MLD + + KI DFGL +    + G+      GT  Y+APE    
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKTFCGTPEYLAPEVLED 179

Query: 529 GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR 588
               +  D +  G+V  E+ CGR P   +  +    L+     L    +    + P   +
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI-----LMEEIRFPRTLSPE-AK 233

Query: 589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
                      + GL    P + L         V+ 
Sbjct: 234 SL---------LAGLLKKDPKQRLGGGPSDAKEVME 260

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  156 bits (396), Expect = 9e-44
 Identities = 49/276 (17%), Positives = 98/276 (35%), Gaps = 23/276 (8%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           +K+G G FG +Y G        +A+K     +K    +   E KI   ++    +  + W
Sbjct: 13  RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRW 70

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
           C  + +  ++   +   SL+      +   + +    +A  + S + Y+     +  +HR
Sbjct: 71  CGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI---HSKNFIHR 127

Query: 478 DIKSSNIM---LDSNFNAKIGDFGLARLVEHAKGSQ------TTVLAGTMGYMAPECATT 528
           D+K  N +           I DFGLA+    A+  Q         L GT  Y +      
Sbjct: 128 DVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG 187

Query: 529 GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR 588
            + S+  D+ S G V +    G  P        +    + + +     K +      LC+
Sbjct: 188 IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE-----KKMSTPIEVLCK 242

Query: 589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
            +   +    +    +C     + +P    +  +  
Sbjct: 243 GYP-SEFATYL---NFCRSLRFDDKPDYSYLRQLFR 274

>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Length = 243

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: West-central african legume (Griffonia simplicifolia) [TaxId: 3850]

 Score =  154 bits (391), Expect = 1e-43
 Identities = 77/245 (31%), Positives = 111/245 (45%), Gaps = 20/245 (8%)

Query: 33  SALTFNYTSFSPQYDDN---ITYERAYPDSNRVIQLPAN-------RETAGRATYNQSMR 82
           + + F Y  F      N   IT+          +QL          R +AG+A+Y++ + 
Sbjct: 2   NTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVF 61

Query: 83  LWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEP 142
           LWD  TG    F T F+F +     +  ADGLAFFLAP  S +    GG       +   
Sbjct: 62  LWDS-TGKAASFYTSFTF-LLKNYGAPTADGLAFFLAPVDSSVKDY-GGFLGLFRHETAA 118

Query: 143 LNSSIPFVAVEFDVYVNSW--DPTFSHVGIDINSVKSKKNVSW-WSDVKSGRRNEAWISY 199
             S    VAVEFD ++N    DP + H+GID+NS+ S     W   D        A I+Y
Sbjct: 119 DPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTRWENDDAYGSSIATAHITY 178

Query: 200 NSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEF 259
           ++ +  L+V  +       +   L + VDL + LP+ V  GFS   G D  +  I SW F
Sbjct: 179 DARSKILTVLLSYEHGRDYI---LSHVVDLAKVLPQKVRIGFSAGVGYD-EVTYILSWHF 234

Query: 260 NSSLE 264
            S+L+
Sbjct: 235 FSTLD 239

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (398), Expect = 1e-43
 Identities = 61/310 (19%), Positives = 118/310 (38%), Gaps = 24/310 (7%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA-SEVKIISRLRHR 409
              + +   +G+G +G V   +       +A+K++S    Q   +    E+KI+ R RH 
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFK--ENSLLTWEFRYKIAQDLASGLLYLQ 467
           N++ +           +   ++    + + L+K  +   L+ +        +  GL Y+ 
Sbjct: 67  NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYI- 125

Query: 468 EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV--EHAKGSQTTVLAGTMGYMAPEC 525
                 V+HRD+K SN++L++  + KI DFGLAR+   +H      T    T  Y APE 
Sbjct: 126 --HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 183

Query: 526 ATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP 584
               K  +K  D++S G +  E+   R     K    Q++ +  +        L   ++ 
Sbjct: 184 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 243

Query: 585 RLCR-DFDGQQIERLMIVGLW-------------CAHPDENLRPSIRQVI-HVLNFEAPL 629
           +            ++    L+                 + + R  + Q + H    +   
Sbjct: 244 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 303

Query: 630 PALPPKMPVP 639
           P+  P    P
Sbjct: 304 PSDEPIAEAP 313

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (393), Expect = 3e-43
 Identities = 68/310 (21%), Positives = 125/310 (40%), Gaps = 34/310 (10%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQG--IKEYASEVKIISRLRHR 409
           + +    K+GQG FG V+K   R+T   +A+K+V   +++         E+KI+  L+H 
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 410 NLVQLLGWCHEKKE--------LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLAS 461
           N+V L+  C  K          + LV++F  +                E +  + Q L +
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR-VMQMLLN 128

Query: 462 GLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS---QTTVLAGTM 518
           GL Y+       ++HRD+K++N+++  +   K+ DFGLAR    AK S   + T    T+
Sbjct: 129 GLYYI---HRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTL 185

Query: 519 GYMAPECATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL--------QWV 569
            Y  PE     +      D++  G +  E+      +     Q Q++L+          V
Sbjct: 186 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 245

Query: 570 WDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLW-------CAHPDENLRPSIRQVI-H 621
           W    N +L E ++    +    +   +  +   +           D   R      + H
Sbjct: 246 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305

Query: 622 VLNFEAPLPA 631
              +  P+P+
Sbjct: 306 DFFWSDPMPS 315

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (392), Expect = 8e-43
 Identities = 57/274 (20%), Positives = 105/274 (38%), Gaps = 28/274 (10%)

Query: 357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLL 415
            Q LG G  G V + F + T    A+K +     Q   +   EV++  R  +  ++V+++
Sbjct: 17  SQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCPHIVRIV 71

Query: 416 GWCH----EKKELLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEW 470
                    +K LL+V E +  G L S +    +   T     +I + +   + YL    
Sbjct: 72  DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL---H 128

Query: 471 EQCVVHRDIKSSNIMLDSNFN---AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECAT 527
              + HRD+K  N++  S       K+ DFG A+         T     T  Y+APE   
Sbjct: 129 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC--YTPYYVAPEVLG 186

Query: 528 TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC 587
             K  K  D++S G++   + CG  P            L     +    ++ +   P   
Sbjct: 187 PEKYDKSCDMWSLGVIMYILLCGYPPFYSN------HGLAISPGMKTRIRMGQYEFPNPE 240

Query: 588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIH 621
                ++++ L+         +   R +I + ++
Sbjct: 241 WSEVSEEVKMLI---RNLLKTEPTQRMTITEFMN 271

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  151 bits (381), Expect = 1e-41
 Identities = 40/278 (14%), Positives = 101/278 (36%), Gaps = 25/278 (8%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           +++G+G FG +++G     N  +A+K   +  +    +   E +    L     +  + +
Sbjct: 11  RRIGEGSFGVIFEGTNLLNNQQVAIKFEPR--RSDAPQLRDEYRTYKLLAGCTGIPNVYY 68

Query: 418 CHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHR 477
             ++    ++   +   SL+  L       + +     A+ + + +  +    E+ +V+R
Sbjct: 69  FGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSI---HEKSLVYR 125

Query: 478 DIKSSNIMLDSNFN-----AKIGDFGLARLV------EHAKGSQTTVLAGTMGYMAPECA 526
           DIK  N ++    +       + DFG+ +        +H    +   L+GT  YM+    
Sbjct: 126 DIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTH 185

Query: 527 TTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL 586
              + S+  D+ + G V +    G  P             + +      G+  ++   R 
Sbjct: 186 LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI------GEKKQSTPLRE 239

Query: 587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN 624
                 ++  + M    +  +   +  P    +  + +
Sbjct: 240 LCAGFPEEFYKYM---HYARNLAFDATPDYDYLQGLFS 274

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  149 bits (377), Expect = 3e-41
 Identities = 59/283 (20%), Positives = 106/283 (37%), Gaps = 19/283 (6%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHR 409
             ++  +K+G+G +G VYK          A+K++   +  +        E+ I+  L+H 
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
           N+V+L    H KK L+LV+E +           E  L +   +  + Q     L  +   
Sbjct: 61  NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQ----LLNGIAYC 116

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG 529
            ++ V+HRD+K  N++++     KI DFGLAR         T  +             + 
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSK 176

Query: 530 KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQW------------VWDLYGNGK 577
           K S   D++S G +  E+  G       +   Q+  +              V +L     
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236

Query: 578 LLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVI 620
                +P     F     E  + +       D N R + +Q +
Sbjct: 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (367), Expect = 7e-40
 Identities = 58/287 (20%), Positives = 104/287 (36%), Gaps = 23/287 (8%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRV--SQGSKQGIKEYASEVKIISRLRHR 409
             +   +K+G+G +G V+K   RET+  +A+KRV      +        E+ ++  L+H+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 410 NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE 469
           N+V+L    H  K+L LV+EF             N  L  E        L  GL +    
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYF-DSCNGDLDPEIVKSFLFQLLKGLGFC--- 117

Query: 470 WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTG 529
             + V+HRD+K  N++++ N   K+ +FGLAR         +  +               
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177

Query: 530 KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD 589
             S   D++S G +  E+A   +P            L+ ++ L G     +        D
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRP--LFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235

Query: 590 FDGQQIERLMIVGL---------------WCAHPDENLRPSIRQVIH 621
           +    +       +                    +   R S  + + 
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  144 bits (365), Expect = 6e-39
 Identities = 61/312 (19%), Positives = 125/312 (40%), Gaps = 33/312 (10%)

Query: 314 RKEGDEEDNQGFSEYIDDEFERGAGPKRFPYKELALATNDFNDDQKLGQGGFGGVYKGFF 373
           +K  ++E  + F     ++F +          +L    + F+  + LG G FG V     
Sbjct: 7   KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQL----DQFDRIKTLGTGSFGRVMLVKH 62

Query: 374 RETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF 430
           +E+ ++ A+K + +      + I+   +E +I+  +    LV+L     +   L +V E+
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122

Query: 431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF 490
           +  G + SHL +     +       A  +     YL       +++RD+K  N+++D   
Sbjct: 123 VAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL---HSLDLIYRDLKPENLLIDQQG 178

Query: 491 NAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG 550
             ++ DFG A+ V+     +T  L GT   +APE   +   +K  D ++ G++  E+A G
Sbjct: 179 YIQVTDFGFAKRVKG----RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

Query: 551 RKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDE 610
             P     P   + + + +    G  +        L            ++  L      +
Sbjct: 235 YPPFFADQP---IQIYEKIV--SGKVRFPSHFSSDLKD----------LLRNLLQVDLTK 279

Query: 611 ---NLRPSIRQV 619
              NL+  +  +
Sbjct: 280 RFGNLKNGVNDI 291

>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 204

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score =  137 bits (347), Expect = 4e-38
 Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 38/236 (16%)

Query: 32  ASALTFNYTSFSPQYDDNITYER-AYPDSNRVIQL-PANRETAGRATYNQSMRLWDKATG 89
           A+  +F   +F+     N+  +  A   SN  +QL   + ++  RA Y+  +++ D  TG
Sbjct: 1   ATETSFIIDAFNK---TNLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTG 57

Query: 90  NLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPF 149
           N+  F T+F+  I +   +  A GL F L P                        S    
Sbjct: 58  NVASFDTNFTMNIRTHRQANSAVGLDFVLVPVQP--------------------ESKGDT 97

Query: 150 VAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVA 209
           V VEFD +++      ++  I        K+V W      G+  E  I+YNSST   SV+
Sbjct: 98  VTVEFDTFLSRISIDVNNNDI--------KSVPWDVHDYDGQNAEVRITYNSSTKVFSVS 149

Query: 210 FTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV---DFAIFSIYSWEFNSS 262
            +           +   V+L + + ++V+ GFS  +G     +    + SW F+S 
Sbjct: 150 LSNPSTG--KSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLSWSFSSK 203

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (345), Expect = 1e-36
 Identities = 59/277 (21%), Positives = 114/277 (41%), Gaps = 27/277 (9%)

Query: 352 NDFNDDQKLGQGGFGGVYKG---FFRETNSYIAVKRVSQGS----KQGIKEYASEVKIIS 404
            +F   + LG G +G V+        +T    A+K + + +     +  +   +E +++ 
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 405 RLRHR-NLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGL 463
            +R    LV L      + +L L+ +++  G L +HL +       E +  + +     +
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGE----IV 139

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAP 523
           L L+   +  +++RDIK  NI+LDSN +  + DFGL++     +  +     GT+ YMAP
Sbjct: 140 LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 199

Query: 524 ECATTGKA--SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA 581
           +    G +   K  D +S G++  E+  G  P      +   + +     L       + 
Sbjct: 200 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI-SRRILKSEPPYPQE 258

Query: 582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQ 618
           +   L +D     I+RL+         D   R     
Sbjct: 259 MSA-LAKDL----IQRLL-------MKDPKKRLGCGP 283

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (347), Expect = 2e-36
 Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 19/220 (8%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHR 409
             + D Q +G G +G V       T + +A+K++ +   S+   K    E++++  +RH 
Sbjct: 18  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77

Query: 410 NLVQLLGWCHEKK------ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGL 463
           N++ LL      +      +  LV  FM  G+    L K    L  +    +   +  GL
Sbjct: 78  NVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEK-LGEDRIQFLVYQMLKGL 134

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAP 523
            Y+       ++HRD+K  N+ ++ +   KI DFGLAR       S+ T    T  Y AP
Sbjct: 135 RYI---HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA----DSEMTGYVVTRWYRAP 187

Query: 524 ECA-TTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ 562
           E      + ++  D++S G +  E+  G+          Q
Sbjct: 188 EVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ 227

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  134 bits (338), Expect = 2e-35
 Identities = 47/227 (20%), Positives = 89/227 (39%), Gaps = 20/227 (8%)

Query: 338 GPKRFPYKELALATNDFND---DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIK 394
             + + Y+   +   + +D    +KLG+G +  V++      N  + VK +    K+ IK
Sbjct: 18  PREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK 77

Query: 395 EYASEVKIISRLR-HRNLVQLLGWCHE--KKELLLVYEFMPNGSLDSHLFKENSLLTWEF 451
               E+KI+  LR   N++ L     +   +   LV+E + N             LT   
Sbjct: 78  R---EIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYD 130

Query: 452 RYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLARLVEHAKGSQ 510
                 ++   L Y        ++HRD+K  N+M+D  +   ++ D+GLA       G +
Sbjct: 131 IRFYMYEILKALDYC---HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--GQE 185

Query: 511 TTVLAGTMGYMAPE-CATTGKASKESDVYSFGIVALEIACGRKPINP 556
             V   +  +  PE            D++S G +   +   ++P   
Sbjct: 186 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 232

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (327), Expect = 9e-34
 Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 17/219 (7%)

Query: 352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHR 409
             + + + +G G  G V   +    +  +A+K++S+   ++   K    E+ ++  + H+
Sbjct: 17  KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76

Query: 410 NLVQLLGWCHEKK------ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGL 463
           N++ LL     +K      ++ LV E M          +       E    +   +  G+
Sbjct: 77  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL----DHERMSYLLYQMLCGI 132

Query: 464 LYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAP 523
            +L       ++HRD+K SNI++ S+   KI DFGLAR          T    T  Y AP
Sbjct: 133 KHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAP 187

Query: 524 ECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQ 562
           E        +  D++S G +  E+   +     +    Q
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (306), Expect = 4e-31
 Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 13/222 (5%)

Query: 351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRH 408
              + +   +G G +G V   F  +T   +AVK++S+   S    K    E++++  ++H
Sbjct: 17  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76

Query: 409 RNLVQLLGWCHEKKEL----LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLL 464
            N++ LL      + L     +       G+  +++ K   L     ++ I Q +  GL 
Sbjct: 77  ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-ILRGLK 135

Query: 465 YLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPE 524
           Y+       ++HRD+K SN+ ++ +   KI DFGLAR  +      T  +A         
Sbjct: 136 YI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEI 189

Query: 525 CATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL 566
                  ++  D++S G +  E+  GR          Q+ L+
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

 Score =  117 bits (294), Expect = 2e-30
 Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 7/129 (5%)

Query: 149 FVAVEFDVYVNS--WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNL 206
            VAVE D Y N+   DP++ H+GIDI SV+SKK   W  ++++G+   A I YNS    L
Sbjct: 4   IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKW--NMQNGKVGTAHIIYNSVDKRL 61

Query: 207 SVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLEMD 266
           S   +    +      + Y VDL   LPE+V  G S +TG+     +I SW F S L+ +
Sbjct: 62  SAVVSYPNADSAT---VSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLKSN 118

Query: 267 DETTNPVSN 275
                   +
Sbjct: 119 STHETNALH 127

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

 Score = 83.1 bits (205), Expect = 2e-18
 Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 9/115 (7%)

Query: 32  ASALTFNYTSFSPQYDDNITYERAYPDSNRVIQL-------PANRETAGRATYNQSMRLW 84
            +AL F +  FS    D I    A   ++  ++L            + GRA +   + +W
Sbjct: 123 TNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIW 182

Query: 85  DKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKD 139
           +  +  +  F   F+F+I S +S   ADG+AFF++   S IP+   G   GL  D
Sbjct: 183 ES-SAVVASFEATFTFLIKSPDSHP-ADGIAFFISNIDSSIPSGSTGRLLGLFPD 235

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  118 bits (296), Expect = 1e-29
 Identities = 40/217 (18%), Positives = 80/217 (36%), Gaps = 20/217 (9%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGW 417
           +KLG G F  V+       N+++A+K V    K   +    E+K++ R+   +  +    
Sbjct: 19  RKLGWGHFSTVWLAKDMVNNTHVAMKIVRG-DKVYTEAAEDEIKLLQRVNDADNTKEDSM 77

Query: 418 CHE---------------KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASG 462
                                +++V+E +    L      E+  +   +  +I++ L  G
Sbjct: 78  GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLG 137

Query: 463 LLYLQEEWEQCVVHRDIKSSNIMLDSN-FNAKIGDFGLARLVEHAKGSQT-TVLAGTMGY 520
           L Y+       ++H DIK  N++++       +    +A L       +  T    T  Y
Sbjct: 138 LDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREY 195

Query: 521 MAPECATTGKASKESDVYSFGIVALEIACGRKPINPK 557
            +PE          +D++S   +  E+  G     P 
Sbjct: 196 RSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 232

>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 228

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  105 bits (262), Expect = 3e-26
 Identities = 33/213 (15%), Positives = 61/213 (28%), Gaps = 32/213 (15%)

Query: 59  SNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFL 118
           S   I++         +  +Q   +W K      ++    +F +  R     ADGLA + 
Sbjct: 35  SADQIRIA-------PSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGRIG-ADGLAIWY 86

Query: 119 APQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSK 178
                       G  FG              V + FD + N        + +  N+ +  
Sbjct: 87  TENQGLD-----GPVFGSADMW-------NGVGIFFDSFDNDGKKNNPAIVVVGNNGQIN 134

Query: 179 KNVSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQ----------VD 228
            +     D  +         + +  + +    T ++  L VM    +             
Sbjct: 135 YDHQN--DGATQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGFTPDKNDYEFCAKV 192

Query: 229 LRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNS 261
               +P    FG S ATG       + S+    
Sbjct: 193 ENMVIPTQGHFGISAATGGLADDHDVLSFLTFQ 225

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 82.1 bits (202), Expect = 1e-18
 Identities = 25/159 (15%), Positives = 50/159 (31%), Gaps = 21/159 (13%)

Query: 358 QKLGQGGFGGVYKGFFRETNSYIAVK----------RVSQGSKQGIKEYASEVKIISRLR 407
           + +G+G    V+  +  E      VK          +V +    G   ++      +R  
Sbjct: 6   KLMGEGKESAVFNCY-SEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 64

Query: 408 HRNLVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYK-IAQDLASGLLYL 466
            R L +L G    K      Y +  N  L   +  +            +   +   +   
Sbjct: 65  FRALQKLQGLAVPKV-----YAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKF 119

Query: 467 QEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH 505
              + + +VH D+   N+++       I DF  +  V  
Sbjct: 120 ---YHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVEVGE 154

>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 218

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp46p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.9 bits (137), Expect = 1e-09
 Identities = 26/211 (12%), Positives = 49/211 (23%), Gaps = 33/211 (15%)

Query: 59  SNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFL 118
                 L   + T G         + D         T  ++F       S    GLAF+L
Sbjct: 33  EEGRFVLTPGKNTKGSLWLKPEYSIKD-------AMTIEWTFRSFGFRGST-KGGLAFWL 84

Query: 119 APQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSK 178
                          FG +            + +   +     +     V   +N     
Sbjct: 85  KQG----NEGDSTELFGGSSKK------FNGLMILLRLDDKLGE----SVTAYLND---- 126

Query: 179 KNVSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQG-LDYQV-----DLRQH 232
                     S         Y  S    ++  T    +  +++  +D +V      ++  
Sbjct: 127 -GTKDLDIESSPYFASCLFQYQDSMVPSTLRLTYNPLDNHLLKLQMDNRVCFQTRKVKFM 185

Query: 233 LPEFVTFGFSMATGVDFAIFSIYSWEFNSSL 263
                  G S         F I   +    +
Sbjct: 186 GSSPFRIGTSAINDASKESFEILKMKLYDGV 216

>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 221

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp47p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.1 bits (109), Expect = 3e-06
 Identities = 29/217 (13%), Positives = 55/217 (25%), Gaps = 41/217 (18%)

Query: 55  AYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGL 114
           A  +  R I L +N+ + G     Q   L D        FT  ++F     +      G+
Sbjct: 31  ASLEEGR-IVLTSNQNSKGSLWLKQGFDLKD-------SFTMEWTFRSVGYSGQT-DGGI 81

Query: 115 AFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINS 174
           +F+     +           G    +         + +  D            +      
Sbjct: 82  SFWFVQDSN--IPRDKQLYNGPVNYDG--------LQLLVDNNGPLGPTLRGQLNDGQKP 131

Query: 175 VKSKKNVS------WWSDVKSGRRNEAWISYNSSTHN-LSVAFTGFRNNLVVMQGLDYQV 227
           V   K               S   +   ++Y+    N L V              + +Q 
Sbjct: 132 VDKTKIYDQSFASCLMGYQDSSVPSTIRVTYDLEDDNLLKVQVDNK---------VCFQT 182

Query: 228 DLRQHLPEFVTFGFSMATG-----VD-FAIFSIYSWE 258
              +        G +   G      + F IF +  + 
Sbjct: 183 RKVRFPSGSYRIGVTAQNGAVNNNAESFEIFKMQFFN 219

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	645
d1hqla_	236	Legume lectin {Griffonia simplicifolia, lectin I-b	100.0
d1fx5a_	240	Legume lectin {Furze (Ulex europaeus), UEA-I [TaxI	100.0
d1leda_	243	Legume lectin {West-central african legume (Griffo	100.0
d1qnwa_	237	Legume lectin {Furze (Ulex europaeus), UEA-II [Tax	100.0
d1gzca_	239	Legume lectin {Cockspur coral tree (Erythrina cris	100.0
d2d3sa1	237	Legume lectin {Winged bean (Psophocarpus tetragono	100.0
d1g9fa_	251	Legume lectin {Soybean (Glycine max) [TaxId: 3847]	100.0
d1f9ka_	234	Legume lectin {Winged bean (Psophocarpus tetragono	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1dbna_	239	Legume lectin {Maackia amurensis, leukoagglutinin	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1g8wa_	233	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1v6ia_	232	Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3	100.0
d1g7ya_	253	Legume lectin {Horse gram (Dolichos biflorus), dif	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1n47a_	233	Legume lectin {Hairy vetch (Vicia villosa), isolec	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1fnya_	237	Legume lectin {Black locust (Robinia pseudoacacia)	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
g1qmo.1	230	Legume lectin {Field bean (Dolichos lablab), Fril	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1ukga_	241	Legume lectin {Bloodwood tree (Pterocarpus angolen	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
g2ltn.1	229	Legume lectin {Garden pea (Pisum sativum) [TaxId:	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ioaa_	228	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1avba_	226	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1dhkb_	204	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1nlsa_	237	Concanavalin A {Jack bean (Canavalia ensiformis) [	99.96
d1gv9a_	228	Carbohydrate-recognition domain of P58/ERGIC-53 {R	99.93
d1nlsa_	237	Concanavalin A {Jack bean (Canavalia ensiformis) [	99.92
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.85
d2a6za1	221	Emp47p N-terminal domain {Baker's yeast (Saccharom	99.8
d2a6va1	218	Emp46p N-terminal domain {Baker's yeast (Saccharom	99.79
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.35
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.53
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.41
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.05
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	95.67
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.52

>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

Probab=100.00  E-value=1.5e-55  Score=434.19  Aligned_cols=223  Identities=37%  Similarity=0.592  Sum_probs=197.1

Q ss_pred             eeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C------CCceEEEEeCCceecccCCCCCccceeEEEEEEEeeC
Q 042831           34 ALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N------RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSR  105 (645)
Q Consensus        34 ~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~------~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~  105 (645)
                      +++|+|++|++...++|.++ ||.+ .+|.|+||+ .      ..++|||+|++||+|||+.+|+++||+|+|+|.|.+.
T Consensus         1 ~~sF~f~~F~~~~~~~l~l~G~A~~-~~~~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~~~~t~~~asFsT~F~F~i~~~   79 (236)
T d1hqla_           1 SVSFTFPNFWSDVEDSIIFQGDANT-TAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFFLKIT   79 (236)
T ss_dssp             CCEEEESCSCSCGGGTEEEEETCEE-ETTEEECSCBCTTSCBCSSCEEEEEESSCEECCCSTTCCCCEEEEEEEEEEEEC
T ss_pred             CEEEEeCCCCCCCcCCEEEeccEEe-cCCEEEEecCCCCCcccccceEEEEECCCEEeecCCCCceeEEEEEEEEEEeCC
Confidence            47899999987656789999 9998 789999998 2      2368999999999999999999999999999999975


Q ss_pred             CCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCC-CCCCCEEEEEEecccCC--CCCCCCceeeecCCCcccceee
Q 042831          106 NSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPL-NSSIPFVAVEFDVYVNS--WDPTFSHVGIDINSVKSKKNVS  182 (645)
Q Consensus       106 ~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~-~~~~~~vaVEfDt~~n~--~d~~~~hvgidvns~~s~~~~~  182 (645)
                       ...+||||||||+|...  +.+..|++||+++..+.+ ...+++|||||||++|.  +||++||||||+||+.|.++..
T Consensus        80 -~~~~gDGlAFvl~p~~~--~~~~~G~~lGl~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~nHIgIdvns~~s~~~~~  156 (236)
T d1hqla_          80 -GNGPADGLAFFLAPPDS--DVKDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKR  156 (236)
T ss_dssp             -SSCCCCEEEEEEECTTC--CCCCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCCSSSCCCSSCEEEEEESSSSCSEEEE
T ss_pred             -CCCCCceEEEEEeCCCC--CCCCCccccccccccccCCcccCceEEEEeeCccCCCCCCCCCCEEEEEcCCcccccccc
Confidence             35679999999999875  445789999999886644 45689999999999997  7999999999999999999888


Q ss_pred             e-cccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccce-eeeEEEEEeecc
Q 042831          183 W-WSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD-FAIFSIYSWEFN  260 (645)
Q Consensus       183 ~-~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~-~~~~~i~~wsf~  260 (645)
                      | ..++.+|+.++|||+||+.+++|+|+|++.+   +..|+|++.|||+++|+++||||||||||.. .+.|+|++|+|+
T Consensus       157 ~~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~---~~~~~ls~~vdL~~~l~~~v~vGFSasTG~~~~~~h~I~sWsF~  233 (236)
T d1hqla_         157 WEDSDIFSGKIATARISYDGSAEILTVVLSYPD---GSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFS  233 (236)
T ss_dssp             CCHHHHTSCSCEEEEEEEETTTTEEEEEEEETT---TEEEEEEEECCGGGTSCSEEEEEEEEECCSCCCEEEEEEEEEEE
T ss_pred             cccccccCCCEEEEEEEEeCCCcEEEEEEecCC---CCCeeEEEEeCHHHhCCCcEEEEEEeECCCCCceEEEEEEeEeE
Confidence            7 3568899999999999999999999998744   5678999999999999999999999999974 678999999998


Q ss_pred             Ccc
Q 042831          261 SSL  263 (645)
Q Consensus       261 ~~~  263 (645)
                      +++
T Consensus       234 s~l  236 (236)
T d1hqla_         234 SNL  236 (236)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            764

>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]

Probab=100.00  E-value=5.9e-54  Score=425.39  Aligned_cols=227  Identities=35%  Similarity=0.598  Sum_probs=202.1

Q ss_pred             CceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C----CCceEEEEeCCceecccCCCCCccceeEEEEEEEeeC
Q 042831           32 ASALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N----RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSR  105 (645)
Q Consensus        32 ~~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~----~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~  105 (645)
                      +.+++|+|++|+++ ..+|.++ ||.+.++|.|+||+ .    ..+.|||+|++||+|||+++++++||+|+|+|.|...
T Consensus         1 ~~~~sF~f~~F~~~-~~~l~l~G~A~~~~~g~l~LT~~~~~~~~~~~G~a~y~~Pv~l~~~~t~~~~sF~t~F~f~i~~~   79 (240)
T d1fx5a_           1 SDDLSFKFKNFSQN-GKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNCNTGELASFITSFSFFMETS   79 (240)
T ss_dssp             CCEEEEEESSCCTT-CSSEEEEETCEECTTSCEESCCCSSSSCSEEEEEEEESSCEECEETTTTEECEEEEEEEEEEEES
T ss_pred             CCceEEECCCCCCC-CCCEEEeeeeEecCCCEEEccCCCCCCccceeEEEecCCCceeecCCCCceeeeEEEEEEEEeCC
Confidence            35789999999875 5689999 99987899999998 2    2367999999999999999999999999999999765


Q ss_pred             -CCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC---CCCCCCceeeecCCCccccee
Q 042831          106 -NSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS---WDPTFSHVGIDINSVKSKKNV  181 (645)
Q Consensus       106 -~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~---~d~~~~hvgidvns~~s~~~~  181 (645)
                       .+..+||||||+|+|...  |.+..|++|||++..+ ++..+++|||||||++|.   +||++||||||+||+.|..+.
T Consensus        80 ~~~~~ggdG~AFvl~p~~~--~~~~~g~~lGl~~~~~-~~~~~~~vAVEFDT~~n~~~~~D~~~nHIgid~ns~~s~~~~  156 (240)
T d1fx5a_          80 ANPKAATDGLTFFLAPPDS--PLRRAGGYFGLFNDTK-CDSSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAE  156 (240)
T ss_dssp             SCGGGCCCEEEEEEECTTC--CCCBCGGGTTTBSSSC-CCGGGCCEEEEEECCCTTTSTTSCSSCEEEEEESSSSCSEEE
T ss_pred             CCCCCCCCcEEEEECCCCC--CCCCCCccccccccCC-CCccCceEEEEeeccccccccCCCCCCceEEccCCccccccc
Confidence             345679999999999753  6778999999998754 456789999999999984   899999999999999999999


Q ss_pred             eecccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccc-eeeeEEEEEeecc
Q 042831          182 SWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV-DFAIFSIYSWEFN  260 (645)
Q Consensus       182 ~~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~-~~~~~~i~~wsf~  260 (645)
                      .+..++.+|+.++|||+||+.+++|+|+|.+.+  +|..|+|++.|||+++|+++||||||||||. ..|.|+|++|+|+
T Consensus       157 ~~~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdLs~~l~~~v~vGFSasTG~~~~~~H~I~sWsFs  234 (240)
T d1fx5a_         157 RWNKRYGLNNVANVEIIYEASSKTLTASLTYPS--DQTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQATHEVLNWYFT  234 (240)
T ss_dssp             ECCCCCSGGGCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCGGGTSCSEEEEEEEEEEETTSCEEEEEEEEEEE
T ss_pred             ccccccCCCCeEEEEEEEcCCCCEEEEEEecCC--CceeeEEeEEEchHHhCCCcEEEEEEeECCCCCCceEEEEEEEeE
Confidence            998888899999999999999999999998755  5678899999999999999999999999995 6789999999999


Q ss_pred             Cccc
Q 042831          261 SSLE  264 (645)
Q Consensus       261 ~~~~  264 (645)
                      +.++
T Consensus       235 st~~  238 (240)
T d1fx5a_         235 STFI  238 (240)
T ss_dssp             EESS
T ss_pred             Eecc
Confidence            8765

>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: West-central african legume (Griffonia simplicifolia) [TaxId: 3850]

Probab=100.00  E-value=1.1e-53  Score=422.20  Aligned_cols=224  Identities=35%  Similarity=0.550  Sum_probs=195.8

Q ss_pred             ceeeEEeCCCCCCC---CCCeEEe-ecccCCCCcEecCC-C------CCceEEEEeCCceecccCCCCCccceeEEEEEE
Q 042831           33 SALTFNYTSFSPQY---DDNITYE-RAYPDSNRVIQLPA-N------RETAGRATYNQSMRLWDKATGNLTDFTTHFSFV  101 (645)
Q Consensus        33 ~~~~f~f~~f~~~~---~~~~~~~-~a~~~~~~~~~Lt~-~------~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~  101 (645)
                      .+++|+|++|++..   ..+|.++ ||.+ .+|.|+||+ .      ..++|||+|++||+|||+ +++++||+|+|+|.
T Consensus         2 ~s~sF~f~~F~~~~~~~~~~l~l~G~A~~-~~g~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~~~-t~~~asFsT~F~f~   79 (243)
T d1leda_           2 NTVNFTYPDFWSYSLKNGTEITFLGDATR-IPGALQLTKTDANGNPVRSSAGQASYSEPVFLWDS-TGKAASFYTSFTFL   79 (243)
T ss_dssp             CCCEEEESCBCCTTSCTTTSEEEEETCEE-ETBEEECSCBCTTSCBCSSEEEEEEESSCEECBCT-TSCBCEEEEEEEEE
T ss_pred             CceEEEcCCCCCCCCCCCCcEEEeeeeEE-cCCEEEeccCCCCCCccccceEEEEeCCCeEecCC-CCcEeeEEEEEEEE
Confidence            47899999997532   4589999 9998 579999997 2      237999999999999995 89999999999999


Q ss_pred             EeeCCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCC-CCCCEEEEEEecccCC--CCCCCCceeeecCCCccc
Q 042831          102 IDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLN-SSIPFVAVEFDVYVNS--WDPTFSHVGIDINSVKSK  178 (645)
Q Consensus       102 i~~~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~-~~~~~vaVEfDt~~n~--~d~~~~hvgidvns~~s~  178 (645)
                      |.+.. ..+||||||||+|.+.  +.+..|++||+++..+.++ ..+++|||||||++|.  .||++||||||+|++.|.
T Consensus        80 i~~~~-~~~gdGlAF~l~p~~~--~~~~~g~~lGl~~~~~~~~~~~~~~vAVEFDT~~n~~~~d~~~nHVgIdvns~~s~  156 (243)
T d1leda_          80 LKNYG-APTADGLAFFLAPVDS--SVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSV  156 (243)
T ss_dssp             EEESS-SSCBCEEEEEEEETTC--CCCCCGGGTTTCCTTTTTCGGGCCCEEEEEECSCCGGGTCCSSCEEEEEESSSSCS
T ss_pred             cCCCC-CCCCCceEEEEcCCCC--CCCCCccccccccccccCCCccCcEEEEEEeCccccccCCCCCCceEEEecCcccc
Confidence            88764 5679999999999875  4457899999998876543 5689999999999997  699999999999999999


Q ss_pred             ceeeec-ccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccceeeeEEEEEe
Q 042831          179 KNVSWW-SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSW  257 (645)
Q Consensus       179 ~~~~~~-~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~w  257 (645)
                      .+..|. .++.+|+.++|||+||+.+++|+|+|++.   ++..|+|++.|||+++|+++||||||||||. .|.|+|++|
T Consensus       157 ~~~~~~~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~---~~~~p~ls~~idL~~~l~~~vyvGFSAsTG~-~~~h~I~sW  232 (243)
T d1leda_         157 ATTRWENDDAYGSSIATAHITYDARSKILTVLLSYE---HGRDYILSHVVDLAKVLPQKVRIGFSAGVGY-DEVTYILSW  232 (243)
T ss_dssp             EEEECCHHHHTSCCEEEEEEEEETTTTEEEEEEEET---TSCEEEEEEECCHHHHSCSEEEEEEEEEECB-SEEEEEEEE
T ss_pred             cccccccCCcccCceeEEEEEEECCCCEEEEEEeeC---CCCCceEEEecCHHHhcCCcEEEEEEcccCC-cceeeEEEE
Confidence            998884 47889999999999999999999999874   3567899999999999999999999999996 599999999


Q ss_pred             eccCcccc
Q 042831          258 EFNSSLEM  265 (645)
Q Consensus       258 sf~~~~~~  265 (645)
                      +|++.+.+
T Consensus       233 sF~s~l~~  240 (243)
T d1leda_         233 HFFSTLDG  240 (243)
T ss_dssp             EEEEECTT
T ss_pred             EEEeeCCC
Confidence            99987654

>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-II [TaxId: 3902]

Probab=100.00  E-value=3.3e-53  Score=419.53  Aligned_cols=224  Identities=39%  Similarity=0.713  Sum_probs=200.8

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C---CCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCC
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N---RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNS  107 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~---~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~  107 (645)
                      .+++|+|++|.++ ..++.++ ||.+.++|.|+||+ .   ..++|||+|++||+||++.+++++||+|+|+|.|.++. 
T Consensus         2 ~~lsF~f~~F~~~-~~~l~l~GdA~i~~~g~l~LT~~~~~~~~~~G~a~y~~Pi~l~~~~~~~~~sF~t~F~f~i~~~~-   79 (237)
T d1qnwa_           2 DDLSFNFDKFVPN-QKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITGKVASFATSFSFVVKADK-   79 (237)
T ss_dssp             CSEEEEESSCCTT-CTTEEEEETCEECTTSCEESSCCC--CCCEEEEEEESSCEECBCTTTCCBCEEEEEEEEECCBSS-
T ss_pred             CcEEEEcCCCCCC-CCCEEEeeceEEcCCCeEEeccCCCCccccEEEEEECCCEEecCCCCcceeeEEEEEEEEEecCC-
Confidence            5789999999876 6789999 99987889999998 3   24789999999999999999999999999999998764 


Q ss_pred             CCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC----CCCCCCceeeecCCCcccceeee
Q 042831          108 SYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS----WDPTFSHVGIDINSVKSKKNVSW  183 (645)
Q Consensus       108 ~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~----~d~~~~hvgidvns~~s~~~~~~  183 (645)
                      ..+||||||||+|....+|.++.|+++|+.+.. .+...+++|||||||++|.    +||++||||||+|++.|.+++.+
T Consensus        80 ~~ggdG~aF~l~p~~~~~~~~~~~~~~g~~~~~-~~~~~~~~vAVEFDT~~n~~~~~~d~~~nHvgid~ns~~s~~~~~~  158 (237)
T d1qnwa_          80 SDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSS-DSKSSNQIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVKW  158 (237)
T ss_dssp             SCCCCEEEEEEEETTCCCCTTCCGGGTTTCSSS-SCCTTSCCEEEEEECCCCTTTCTTSCSSCEEEEEESSSSCSEEEEC
T ss_pred             CCCcceeEEEEeCCCCCCCCCCccccccccCCC-CCCCcccEEEEEeeceecCCcCCCCCCCCeEEEECCCCCccccccc
Confidence            557999999999999888888899999998864 3567789999999999885    57999999999999999988876


Q ss_pred             cccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccce--eeeEEEEEeeccC
Q 042831          184 WSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD--FAIFSIYSWEFNS  261 (645)
Q Consensus       184 ~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~--~~~~~i~~wsf~~  261 (645)
                        ++.+|+.++|||+||+.+++|+|+|++.+  +|..|+|++.|||+++|+++||||||||||..  .|.|+|++|+|++
T Consensus       159 --~~~~G~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~p~ls~~vDLs~~l~~~vyvGFSasTG~~~~~q~h~I~sWsF~s  234 (237)
T d1qnwa_         159 --DWRNGEVADVVITYRAPTKSLTVCLSYPS--DGTSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYFTS  234 (237)
T ss_dssp             --CCCTTCCEEEEEEEEGGGTEEEEEEECTT--TCCEEEEEEECCHHHHSCSEEEEEEEEEESCGGGCBCCEEEEEEEEE
T ss_pred             --ccCCCcEEEEEEEEcCCCcEEEEEEecCC--CCccceEEEEEChHHhCCCcEEEEEEeECCCCCCccEeEEEEeEeEE
Confidence              47899999999999999999999998754  57789999999999999999999999999975  4899999999988


Q ss_pred             cc
Q 042831          262 SL  263 (645)
Q Consensus       262 ~~  263 (645)
                      ++
T Consensus       235 ~l  236 (237)
T d1qnwa_         235 NL  236 (237)
T ss_dssp             EC
T ss_pred             ec
Confidence            65

>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

Probab=100.00  E-value=1e-52  Score=416.29  Aligned_cols=224  Identities=33%  Similarity=0.616  Sum_probs=197.5

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CC------CceEEEEeCCceecccCCCCCccceeEEEEEEEee
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NR------ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDS  104 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~------~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~  104 (645)
                      .+++|+|++|+++ ..++.|+ ||.+.++|.|+||+ ..      .+.|||+|++||+||++.+++++||+|+|+|.|..
T Consensus         2 ~~~sF~f~~F~~~-~~nl~l~G~A~i~~~g~l~LT~~~~~~~~~~~~~Gr~~y~~Pv~l~~~~~~~~~sFst~F~f~i~~   80 (239)
T d1gzca_           2 ETISFSFSEFEPG-NDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFSIEQ   80 (239)
T ss_dssp             EEEEEEESSCCTT-CTTEEEEETCEECTTSCEESSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCC
T ss_pred             eeEEEEeCCCCCC-CCCeEEeeeeEECCCCeEEccCCCCCCcccccceEEEEeCCCeEecCCCCCceeeEEEEEEEEEec
Confidence            4789999999976 5689999 99987889999998 32      26899999999999999999999999999999986


Q ss_pred             CC-CCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC-CCCCCCceeeecCCCcccceee
Q 042831          105 RN-SSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS-WDPTFSHVGIDINSVKSKKNVS  182 (645)
Q Consensus       105 ~~-~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~-~d~~~~hvgidvns~~s~~~~~  182 (645)
                      .. ...+||||||+|+|.+.  +.+..||+||+++..+. ...++.|||||||++|. +||++||||||+|++.|..+..
T Consensus        81 ~~~~~~g~dG~aF~l~p~~~--~~~~~~g~lg~~~~~~~-~~~~~~vaVEFDT~~n~~~d~~~~HvgI~vn~~~s~~t~~  157 (239)
T d1gzca_          81 PYTRPLPADGLVFFMGPTKS--KPAQGYGYLGVFNNSKQ-DNSYQTLAVEFDTFSNPWDPPQVPHIGIDVNSIRSIKTQP  157 (239)
T ss_dssp             CCSSSCCCEEEEEEEECSSC--CCCCCGGGTTTCSSSSC-CGGGCCEEEEEECSCCTTSCSSSSEEEEEESSSSCSEEEE
T ss_pred             CCCCCCCCCeEEEEECCCCC--CCCCCcccccccccCCC-CCccceEEEEEEccccCCCCCCCCEEEEEECCccccccCC
Confidence            53 45679999999999875  34567889999876543 45678899999999998 7999999999999999998887


Q ss_pred             ecccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccc---eeeeEEEEEeec
Q 042831          183 WWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV---DFAIFSIYSWEF  259 (645)
Q Consensus       183 ~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~---~~~~~~i~~wsf  259 (645)
                      +  ++.+|+.++|||+||+.+++|+|+|++.+  +|..|+|++.|||+++|+++|||||||+||.   ..|.|+|++|+|
T Consensus       158 ~--~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~~H~V~sWsF  233 (239)
T d1gzca_         158 F--QLDNGQVANVVIKYDAPSKILHVVLVYPS--SGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSF  233 (239)
T ss_dssp             C--CCCTTCEEEEEEEEETTTTEEEEEEECTT--TCCEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEEE
T ss_pred             c--cccCCCEEEEEEEEeCCCcEEEEEEecCC--CCcceeeeeEechHHhcCCcEEEEEEEEcCCCCCCceeeEEEEEEe
Confidence            6  57899999999999999999999998754  5778999999999999999999999999994   578999999999


Q ss_pred             cCccc
Q 042831          260 NSSLE  264 (645)
Q Consensus       260 ~~~~~  264 (645)
                      ++.++
T Consensus       234 ~s~lp  238 (239)
T d1gzca_         234 QASLP  238 (239)
T ss_dssp             EEEEC
T ss_pred             EeeCC
Confidence            98754

>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]

Probab=100.00  E-value=1.1e-52  Score=415.24  Aligned_cols=221  Identities=40%  Similarity=0.680  Sum_probs=195.5

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C-----CCceEEEEeCCceecccCCCCCccceeEEEEEEEeeC
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N-----RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSR  105 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~-----~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~  105 (645)
                      .+++|+|++|.++ .+++.|+ ||.+.++|.|+||+ .     .+++|||+|++||+|||+.+++++||+|+|+|.|...
T Consensus         1 ~t~sF~f~~F~~~-~~~l~l~G~A~i~~~g~l~LT~~~~~~~~~~~~G~a~y~~pi~l~~~~~~~~~sF~t~F~f~i~~~   79 (237)
T d2d3sa1           1 KTISFNFNQFHQN-EEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNVASFETRFSFSIRQP   79 (237)
T ss_dssp             CEEEEEESSCCSS-CTTEEEEETCEECTTSCEECSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCS
T ss_pred             CeEEEEeCCCCCC-CCCEEEeeeeEeCCCCeEEcCCCCCCCcccccEEEEEeCCCEEeecCCCCceeeEEEEEEEEeecC
Confidence            3689999999876 6789999 99987789999998 2     2589999999999999999999999999999999765


Q ss_pred             C-CCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCcccceeeec
Q 042831          106 N-SSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWW  184 (645)
Q Consensus       106 ~-~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~s~~~~~~~  184 (645)
                      . ...+||||||+|+|...  +.+..||+||+++..    ..+++|||||||++|.+||++||||||+|++.|.+...+ 
T Consensus        80 ~~~~~g~dGlaFvl~p~~~--~~~~~gg~lG~~~~~----~~~~~vaVEFDT~~n~~d~~~nHvgI~vns~~s~~~~~~-  152 (237)
T d2d3sa1          80 FPRPHPADGLVFFIAPPNT--QTGEGGGYFGIYNPL----SPYPFVAVEFDTFRNTWDPQIPHIGIDVNSVISTKTVPF-  152 (237)
T ss_dssp             CCSSCCCEEEEEEEECSSC--CCCBCGGGTTTBCTT----SCCCCEEEEEECSCCTTCCSSSEEEEEESSSSCSEEEEC-
T ss_pred             CCCCCCCCeEEEEeCCCCc--cCCccccccccccCC----CcCceEEEEEEeecCCCCCCCCcEEEEcCCCccccccce-
Confidence            3 44578999999999764  556789999998753    356789999999999999999999999999999888776 


Q ss_pred             ccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccc-------eeeeEEEEEe
Q 042831          185 SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV-------DFAIFSIYSW  257 (645)
Q Consensus       185 ~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~-------~~~~~~i~~w  257 (645)
                       ++.+|+.++|||+||+.+++|+|+|++.+  +|..|++++.|||+.+|+++||||||||||.       ..|.|+|++|
T Consensus       153 -~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSasTG~~~~~~~~~~e~h~I~sW  229 (237)
T d2d3sa1         153 -TLDNGGIANVVIKYDASTKILHVVLVFPS--LGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSW  229 (237)
T ss_dssp             -CCCTTCEEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECCGGGCCTTCCCCCEEEEE
T ss_pred             -eecCCCEEEEEEEEECCCCEEEEEEEcCC--CCcccceeeEechHHhCCCcEEEEEEeECCCCccCccccceeeEEEEe
Confidence             47899999999999999999999999765  4667899999999999999999999999994       5689999999


Q ss_pred             eccCccc
Q 042831          258 EFNSSLE  264 (645)
Q Consensus       258 sf~~~~~  264 (645)
                      +|++.++
T Consensus       230 sFss~lp  236 (237)
T d2d3sa1         230 SFSASLP  236 (237)
T ss_dssp             EEEEECC
T ss_pred             EeEeeCC
Confidence            9988753

>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=5.7e-52  Score=413.90  Aligned_cols=227  Identities=36%  Similarity=0.648  Sum_probs=193.7

Q ss_pred             CceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CC------CceEEEEeCCceecccCCCCCccceeEEEEEEEe
Q 042831           32 ASALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NR------ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVID  103 (645)
Q Consensus        32 ~~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~------~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~  103 (645)
                      |.+++|+|++|+++ ..++.|+ ||.+.++|.|+||+ ..      .++|||+|++||+||++.+++++||+|+|+|.|.
T Consensus         1 a~~~sF~f~~F~~~-~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~~~~~~~~~sf~t~f~F~i~   79 (251)
T d1g9fa_           1 AETVSFSWNKFVPK-QPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFY   79 (251)
T ss_dssp             CEEEEEEESSCCC--CTTEEEEETCBCCTTC-CBCSCBC---CBCTTCEEEEEESSCEECBCC-CCCBCEEEEEEEEEEE
T ss_pred             CceEEEEeCCCCCC-CCCEEEeeeEEECCCCEEEecCCcCCCcccCceEEEEEeCCCEEccCCCCccceeeEEEEEEEEe
Confidence            45799999999876 5679999 99987889999998 22      3789999999999999999999999999999999


Q ss_pred             eCCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCcccceeee
Q 042831          104 SRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSW  183 (645)
Q Consensus       104 ~~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~s~~~~~~  183 (645)
                      ......+||||||+|+|...  +.+..||+||+++..   ...+++||||||||+|.+||++||||||+|++.|..+..+
T Consensus        80 ~~~~~~~gDGlAFvl~p~~~--~~~~~~g~lG~~~~~---~~~~~~vaVEFDT~~n~~D~~~~Hvgi~~n~~~s~~~~~~  154 (251)
T d1g9fa_          80 APDTKRLADGLAFFLAPIDT--KPQTHAGYLGLFNEN---ESGDQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSW  154 (251)
T ss_dssp             CSCC--CCEEEEEEEEETTC--CCCCCGGGTTTCCTT---SCCCSCEEEEEECC-CTTSCSSSEEEEEESSSSCSEEEEC
T ss_pred             cCCCCCCCCceEEEEecCCC--CCCCccCccCccccc---CCCcceEEEEEecccCCCCCCCCcEeEEecCcccccccce
Confidence            88778899999999999864  456788999998753   3457889999999999999999999999999999988877


Q ss_pred             cccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeeccccee--eeEEEEEeeccC
Q 042831          184 WSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDF--AIFSIYSWEFNS  261 (645)
Q Consensus       184 ~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~--~~~~i~~wsf~~  261 (645)
                        ++.+|+.++|||+||+.+++|+|++.+..  +|..|++++.|||+.+|+++||||||||||...  |.|+|++|+|++
T Consensus       155 --~l~~g~~~~v~I~Yd~~~~~L~v~l~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~~~~~h~I~sWsF~s  230 (251)
T d1g9fa_         155 --DLANNKVAKVLITYDASTSLLVASLVYPS--QRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFAS  230 (251)
T ss_dssp             --CCCTTCCEEEEEEEETTTTEEEEEEEEGG--GTEEEEEEEECCC-CCSCSEEEEEEEEEECSSSCCCEEEEEEEEEEE
T ss_pred             --EecCCCEEEEEEEEECCccEEEEEEecCC--CCcceeEEEEecchhhCCCcEEEEEEeecCCCCCCceeEEEEeEeEC
Confidence              57899999999999999999999998643  677899999999999999999999999999755  889999999998


Q ss_pred             ccccccC
Q 042831          262 SLEMDDE  268 (645)
Q Consensus       262 ~~~~~~~  268 (645)
                      .+.+...
T Consensus       231 ~~~~~~~  237 (251)
T d1g9fa_         231 NLPHASS  237 (251)
T ss_dssp             EECC---
T ss_pred             CCCCCCc
Confidence            8766543

>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]

Probab=100.00  E-value=9.3e-52  Score=407.99  Aligned_cols=219  Identities=36%  Similarity=0.659  Sum_probs=192.6

Q ss_pred             eeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CC------CceEEEEeCCceecccCCCCCccceeEEEEEEEeeC
Q 042831           34 ALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NR------ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSR  105 (645)
Q Consensus        34 ~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~------~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~  105 (645)
                      +.+|+|++|+++ .+++.|+ ||.+.++|.|+||+ ..      .++|||+|++||+||++.+++++||+|+|+|.|.+.
T Consensus         2 ~~SF~f~~F~~~-~~~l~l~G~A~~~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~~~~~~~~~sFsT~F~f~i~~~   80 (234)
T d1f9ka_           2 TQSFNFDHFEEN-SKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQP   80 (234)
T ss_dssp             EEEEEESSCCSS-CTTEEEEETCEECTTSCEECSCSEETTEECCSCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECC
T ss_pred             ceEEEeCCCCCC-CCCEEEeeeEEEcCCCEEEeecCCCCCCcccceeEEEEeCCCEEeeCCCCCcCcceEEEEEEEEECC
Confidence            579999999865 6789999 99987889999998 22      368999999999999999999999999999999865


Q ss_pred             C-CCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCcccceeeec
Q 042831          106 N-SSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWW  184 (645)
Q Consensus       106 ~-~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~s~~~~~~~  184 (645)
                      . ...+||||||+|+|...  |.+..|+++|+++..    ..++.|||||||++|.+||++||||||+|++.|.++..+ 
T Consensus        81 ~~~~~g~dG~aF~i~p~~~--~~~~~g~~~g~~~~~----~~~~~vaVEFDT~~n~~Dp~~nHvgi~~ns~~s~~~~~~-  153 (234)
T d1f9ka_          81 YAYPEPADGLTFFMVPPNS--PQGEDGGNLGVFKPP----EGDNAFAVEFDTFQNTWDPQVPHIGIDVNSIVSSKTLHF-  153 (234)
T ss_dssp             CSSSCCCEEEEEEEECTTC--CCCCSGGGTTTCCSS----CCSCCEEEEEECSCCTTCCSSSEEEEEESSSSCSEEEEC-
T ss_pred             CCCCCccceEEEEECCCCC--CcccccccccccCCC----CccceEEEEEeccccCCCCCCCcEeEecCCccccccccc-
Confidence            3 34578999999999864  667789999998653    345679999999999999999999999999999888777 


Q ss_pred             ccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCC--CceEEEEeecccc---eeeeEEEEEeec
Q 042831          185 SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLP--EFVTFGFSMATGV---DFAIFSIYSWEF  259 (645)
Q Consensus       185 ~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~--~~~~vGfsastg~---~~~~~~i~~wsf  259 (645)
                       ++.+|+.++|||+||+.+++|+|+|++..  ++..|+|++.|||+++|+  |+|||||||+||.   ..|.|+|++|+|
T Consensus       154 -~l~~G~~~~v~I~Yd~~~~~l~V~l~~~~--~~~~~~ls~~idL~~~l~~~~~v~vGFSasTG~~~~~~~~h~I~sWsF  230 (234)
T d1f9ka_         154 -QLENGGVANVVIKYDSPTKILNVVLAFHS--VGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSF  230 (234)
T ss_dssp             -CCCTTCCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSTTCSEEEEEEEEEECSSTTCCCEEEEEEEEE
T ss_pred             -cccCCCEEEEEEEEcCCCcEEEEEEEeCC--CCccceEEEEEcHHHhcCCCCEEEEEEEeecCCCCCceeeeEEEEEEe
Confidence             58899999999999999999999999765  456789999999999996  5699999999994   578999999999


Q ss_pred             cCcc
Q 042831          260 NSSL  263 (645)
Q Consensus       260 ~~~~  263 (645)
                      ++++
T Consensus       231 ~s~l  234 (234)
T d1f9ka_         231 TSSL  234 (234)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            8764

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-51  Score=419.24  Aligned_cols=261  Identities=26%  Similarity=0.336  Sum_probs=212.4

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|+..++||+|+||+||+|+++.+|+.||||++.... .+..+++.+|++++++++||||+++++++.+++..++||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            46888999999999999999999999999999987553 33456789999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC-c
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-S  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~-~  509 (645)
                      |++|+|.+++.. ...+++..++.++.||++||.|||+   ++|+||||||+|||+++++++||+|||+|+....... .
T Consensus        85 ~~gg~L~~~l~~-~~~l~e~~~~~i~~qi~~al~ylH~---~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~  160 (271)
T d1nvra_          85 CSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  160 (271)
T ss_dssp             CTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             cCCCcHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH---cCCccCcccHHHEEECCCCCEEEccchhheeeccCCccc
Confidence            999999999854 4579999999999999999999998   8999999999999999999999999999987654332 2


Q ss_pred             ceeecccCccccCccccccCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          510 QTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~-t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......... ..    ... ......  .+  ..
T Consensus       161 ~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~-~~----~~~-~~~~~~--~~--~~  230 (271)
T d1nvra_         161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YS----DWK-EKKTYL--NP--WK  230 (271)
T ss_dssp             CBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHH-HH----HHH-TTCTTS--TT--GG
T ss_pred             cccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHH-HH----HHh-cCCCCC--Cc--cc
Confidence            2345689999999999988775 67899999999999999999999754432211 11    111 111100  00  01


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLP  630 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  630 (645)
                      ..    ...+.+++.+||+.||++|||++|+++|.|+..+++
T Consensus       231 ~~----s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~l~  268 (271)
T d1nvra_         231 KI----DSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  268 (271)
T ss_dssp             GS----CHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             cC----CHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcCCC
Confidence            11    235667889999999999999999999999987654

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.2e-51  Score=423.31  Aligned_cols=254  Identities=28%  Similarity=0.461  Sum_probs=199.1

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCe---EEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNS---YIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~---~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      +|...++||+|+||+||+|++..+++   .||||++... .....++|.+|+++|++++|||||+++|+|.+++..++||
T Consensus        27 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~  106 (299)
T d1jpaa_          27 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIIT  106 (299)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             hcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEE
Confidence            45567899999999999999876553   6999988654 4556678999999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |||++|+|.+++......++|.+++.++.|||+||.|||+   ++|+||||||+|||++.++.+||+|||+++.......
T Consensus       107 Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~  183 (299)
T d1jpaa_         107 EFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS  183 (299)
T ss_dssp             ECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             EecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhh---CCCccCccccceEEECCCCcEEECCcccceEccCCCC
Confidence            9999999999998777789999999999999999999999   8999999999999999999999999999987654322


Q ss_pred             cc----eeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          509 SQ----TTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       509 ~~----~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ..    .....||+.|+|||.+.++.++.++|||||||+||||+| |+.||......   .+...    ..++...    
T Consensus       184 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~---~~~~~----i~~~~~~----  252 (299)
T d1jpaa_         184 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ---DVINA----IEQDYRL----  252 (299)
T ss_dssp             ------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHH----HHTTCCC----
T ss_pred             cceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH---HHHHH----HHcCCCC----
Confidence            21    223457899999999999999999999999999999998 89999754321   22222    2222111    


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                           ..+.+....+.+|+.+||+.||++||||+||++.|+.
T Consensus       253 -----~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~  289 (299)
T d1jpaa_         253 -----PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK  289 (299)
T ss_dssp             -----CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             -----CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence                 1111223467788999999999999999999999874

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.1e-51  Score=423.01  Aligned_cols=263  Identities=25%  Similarity=0.406  Sum_probs=218.0

Q ss_pred             hHHHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCe
Q 042831          344 YKELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKE  423 (645)
Q Consensus       344 ~~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~  423 (645)
                      +++++...++|+..++||+|+||+||+|++..+++.||||+++.+. ...++|.+|+++|++++|||||+++++|.+++.
T Consensus         9 ~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   87 (287)
T d1opja_           9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP   87 (287)
T ss_dssp             CCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             CcccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCe
Confidence            3445555678888999999999999999999999999999986543 345789999999999999999999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      .++|||||++|+|.+++.+. ...+++..+..|+.||++||.|||+   ++|+||||||+|||+++++.+||+|||+++.
T Consensus        88 ~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~  164 (287)
T d1opja_          88 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL  164 (287)
T ss_dssp             CEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCCTTT
T ss_pred             eEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHH---CCcccCccccCeEEECCCCcEEEccccceee
Confidence            99999999999999999754 5679999999999999999999999   8999999999999999999999999999987


Q ss_pred             ccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      .............|++.|+|||++.++.++.++|||||||++|||++|+.|+......  .    .+.+....+..    
T Consensus       165 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~--~----~~~~~i~~~~~----  234 (287)
T d1opja_         165 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--S----QVYELLEKDYR----  234 (287)
T ss_dssp             CCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH--H----HHHHHHHTTCC----
T ss_pred             cCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH--H----HHHHHHhcCCC----
Confidence            6654444444456899999999999999999999999999999999977776533321  1    12222222211    


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                       +.....    ..+.+.+|+..||+.||++||||+|+++.|+.
T Consensus       235 -~~~~~~----~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~  272 (287)
T d1opja_         235 -MERPEG----CPEKVYELMRACWQWNPSDRPSFAEIHQAFET  272 (287)
T ss_dssp             -CCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -CCCCcc----chHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence             111112    23467788999999999999999999998864

>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Maackia amurensis, leukoagglutinin [TaxId: 37501]

Probab=100.00  E-value=2.7e-50  Score=400.71  Aligned_cols=226  Identities=36%  Similarity=0.658  Sum_probs=200.9

Q ss_pred             CceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C-----CCceEEEEeCCceecccCCCCCccceeEEEEEEEee
Q 042831           32 ASALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N-----RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDS  104 (645)
Q Consensus        32 ~~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~-----~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~  104 (645)
                      +.+++|+|++|.++ ..++.|+ ||.+.++|.||||+ .     ..++|||+|++||+||++.+++++||+|+|+|.|.+
T Consensus         1 ~~~~sF~f~~F~~~-~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~G~a~y~~pi~l~~~~~~~~~sFst~F~F~i~~   79 (239)
T d1dbna_           1 SDELSFTINNFVPN-EADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNTTGSVASFSTSFTFVVKA   79 (239)
T ss_dssp             CCEEEEEESSCCTT-CTTEEEEETCEECTTSCEESSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCC
T ss_pred             CCceEEEeCCCCCC-CCCEEEeeeeEECCCCEEEccCCCCCCcccceeEEEeecCCEEccCCCCccceEEEEEEEEEEEC
Confidence            45799999999876 5679999 99987889999998 2     236899999999999999999999999999999998


Q ss_pred             CCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC----CCCCCCceeeecCCCcccce
Q 042831          105 RNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS----WDPTFSHVGIDINSVKSKKN  180 (645)
Q Consensus       105 ~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~----~d~~~~hvgidvns~~s~~~  180 (645)
                      .....+||||||+|+|.+..++.++.|++||+++..+ ++..++.|||||||++|.    +||+++|||||+|++.|.+.
T Consensus        80 ~~~~~~gdG~AF~l~~~~~~~~~~~~g~~lGl~~~~~-~~~~~~~~aVEfDT~~n~~~~~~d~~~~hvgid~n~~~s~~~  158 (239)
T d1dbna_          80 PNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSN-SDSSNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKT  158 (239)
T ss_dssp             SSTTSCCEEEEEEEECTTCCCCSSSCGGGTTSCSSSC-CCTTSCCEEEEEECCCCTTTCTTSCSSCEEEEEESSSSCSEE
T ss_pred             CCCCCCCCCEEEEEeCCCccCCcccCccccccccccC-CCcccCeeeeEEeeeecCCCCCCCCCCceeeEEcCCcccccc
Confidence            8777889999999999988888888899999998654 456789999999999885    58999999999999999877


Q ss_pred             eeecccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccce--eeeEEEEEee
Q 042831          181 VSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD--FAIFSIYSWE  258 (645)
Q Consensus       181 ~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~--~~~~~i~~ws  258 (645)
                      ..+  .+.+|+.++|||+|++.+++|.|++.+..  ++..|.+++.+||+++|+++||||||||||..  .|.|+|++|+
T Consensus       159 ~~~--~~~~g~~~~~~i~y~~~~~~l~v~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~H~I~sWs  234 (239)
T d1dbna_         159 VQW--DWINGGVAFATITYLAPNKTLIASLVYPS--NQTTFSVAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWS  234 (239)
T ss_dssp             EEC--CCCTTCCEEEEEEEEGGGTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECSGGGCCCCEEEEEE
T ss_pred             ccc--eEeCCceeEEEEEEcCCCCEEEEEEEecC--CCccEEEEEecchHHhcCCcEEEEEEEeCCCCCCcceeEEEEEE
Confidence            665  46789999999999999999999998755  46678899999999999999999999999964  5789999999


Q ss_pred             ccCcc
Q 042831          259 FNSSL  263 (645)
Q Consensus       259 f~~~~  263 (645)
                      |++.+
T Consensus       235 Fss~l  239 (239)
T d1dbna_         235 FTSTL  239 (239)
T ss_dssp             EEEEC
T ss_pred             eEEeC
Confidence            98764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-50  Score=413.79  Aligned_cols=255  Identities=23%  Similarity=0.344  Sum_probs=214.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|...++||+|+||+||+|++..+|+.||||++........+.+.+|++++++++||||+++++++.+++..++|||||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            46899999999999999999999999999999997665556678999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++|+|.+++.+  ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.++++||+|||+++...... ...
T Consensus       100 ~gg~L~~~~~~--~~l~~~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~-~~~  173 (293)
T d1yhwa1         100 AGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKR  173 (293)
T ss_dssp             TTCBHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-CCB
T ss_pred             CCCcHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCcHHHeEECCCCcEeeccchhheeecccc-ccc
Confidence            99999988754  358999999999999999999998   899999999999999999999999999998765432 233


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFD  591 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~  591 (645)
                      ....||+.|+|||++.++.++.++|||||||++|||++|+.||......      +........+... .   ..    +
T Consensus       174 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~------~~~~~~~~~~~~~-~---~~----~  239 (293)
T d1yhwa1         174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL------RALYLIATNGTPE-L---QN----P  239 (293)
T ss_dssp             CCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHHCSCC-C---SS----G
T ss_pred             cccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHH------HHHHHHHhCCCCC-C---CC----c
Confidence            4567999999999999999999999999999999999999999753321      1111111111110 0   00    1


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          592 GQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       592 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ......+.+++.+||++||++|||++|+++|.|+.
T Consensus       240 ~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~  274 (293)
T d1yhwa1         240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK  274 (293)
T ss_dssp             GGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGG
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhC
Confidence            11224567888999999999999999999999885

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-51  Score=414.34  Aligned_cols=253  Identities=27%  Similarity=0.493  Sum_probs=199.4

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|+..++||+|+||.||+|++.+ ++.||||+++... ...++|.+|++++++++||||++++|+|..++..++|||||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~-~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~   82 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   82 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETT-TEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECC-CCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEec
Confidence            567788999999999999999874 6789999997543 34578999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++|+|.+++......+++..++.|+.|||+||.|||+   ++|+||||||+|||+|+++++||+|||+++..........
T Consensus        83 ~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~  159 (263)
T d1sm2a_          83 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS  159 (263)
T ss_dssp             TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCTTCSGGGEEECGGGCEEECSCC-------------
T ss_pred             CCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhc---cceeecccchhheeecCCCCeEecccchheeccCCCceee
Confidence            9999999998777889999999999999999999999   8999999999999999999999999999987655444444


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHcC-CCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACG-RKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG-~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      ....||+.|+|||++.++.++.++|||||||++|||+|+ ++|+....   ...+...+    ..+..  ...|..    
T Consensus       160 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~---~~~~~~~i----~~~~~--~~~p~~----  226 (263)
T d1sm2a_         160 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS---NSEVVEDI----STGFR--LYKPRL----  226 (263)
T ss_dssp             -----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC---HHHHHHHH----HHTCC--CCCCTT----
T ss_pred             cceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC---HHHHHHHH----HhcCC--CCCccc----
Confidence            456789999999999999999999999999999999995 55554322   11222221    12211  111221    


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                         ..+.+.+++.+||+.||++||||+||+++|+.
T Consensus       227 ---~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~  258 (263)
T d1sm2a_         227 ---ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE  258 (263)
T ss_dssp             ---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---cCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence               12467788999999999999999999999873

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-51  Score=416.07  Aligned_cols=259  Identities=29%  Similarity=0.490  Sum_probs=205.4

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ...++|...++||+|+||.||+|++++   .||||+++..  ..+..+.|.+|++++++++||||+++++++.+ +.+++
T Consensus         5 i~~~~~~~~~~lG~G~fg~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~l   80 (276)
T d1uwha_           5 IPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAI   80 (276)
T ss_dssp             CCTTCCCCCSEEEECSSCEEEEEESSS---EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred             cccccEEEEEEEeeCCCcEEEEEEECC---EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEE
Confidence            345678899999999999999998753   5999998644  45567889999999999999999999998864 56899


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      |||||++|+|.+++...+..+++..+..|+.||++||+|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus        81 v~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~  157 (276)
T d1uwha_          81 VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW  157 (276)
T ss_dssp             EEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCCCSCC----
T ss_pred             EEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhc---CCEeccccCHHHEEEcCCCCEEEccccceeecccc
Confidence            999999999999998777789999999999999999999998   89999999999999999999999999999876543


Q ss_pred             CC-cceeecccCccccCcccccc---CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          507 KG-SQTTVLAGTMGYMAPECATT---GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       507 ~~-~~~~~~~gt~~y~aPE~~~~---~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      .. .......||+.|||||++.+   +.++.++|||||||+||||+||+.||.......      .+.....++......
T Consensus       158 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~------~~~~~~~~~~~~p~~  231 (276)
T d1uwha_         158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD------QIIFMVGRGYLSPDL  231 (276)
T ss_dssp             --------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH------HHHHHHHHTSCCCCG
T ss_pred             CCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHH------HHHHHHhcCCCCCcc
Confidence            32 23445689999999999864   358999999999999999999999997544321      111222222211111


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                       +.....+    .+.+.+++.+||+.||++||||+|++++|+.
T Consensus       232 -~~~~~~~----~~~l~~li~~cl~~dp~~RPt~~~il~~Le~  269 (276)
T d1uwha_         232 -SKVRSNC----PKAMKRLMAECLKKKRDERPLFPQILASIEL  269 (276)
T ss_dssp             -GGSCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -hhccccc----hHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence             1111222    2467788899999999999999999999975

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-51  Score=411.51  Aligned_cols=251  Identities=27%  Similarity=0.408  Sum_probs=211.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|+..+.||+|+||.||+|+++.+++.||+|++...   .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            4688899999999999999999999999999998643   2234567899999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |||++|+|.+++.+. ..+++..+..++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+++....   
T Consensus        86 Ey~~~g~L~~~l~~~-~~l~e~~~~~i~~qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~---  158 (263)
T d2j4za1          86 EYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---  158 (263)
T ss_dssp             ECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCC---
T ss_pred             eecCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeeeeccccceecCCCCEeecccceeeecCC---
Confidence            999999999998654 469999999999999999999999   8999999999999999999999999999976543   


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      .......||+.|+|||++.+..++.++|||||||+||||++|+.||......   .+    .....++..      .+..
T Consensus       159 ~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~---~~----~~~i~~~~~------~~p~  225 (263)
T d2j4za1         159 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ---ET----YKRISRVEF------TFPD  225 (263)
T ss_dssp             CCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---HH----HHHHHTTCC------CCCT
T ss_pred             CcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHH---HH----HHHHHcCCC------CCCc
Confidence            2334567999999999999999999999999999999999999999754321   11    122222221      1111


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..    .+.+.+++.+||++||++|||++|+++|.|+.
T Consensus       226 ~~----s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~  259 (263)
T d2j4za1         226 FV----TEGARDLISRLLKHNPSQRPMLREVLEHPWIT  259 (263)
T ss_dssp             TS----CHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHH
T ss_pred             cC----CHHHHHHHHHHccCCHhHCcCHHHHHcCcCcC
Confidence            12    24567788999999999999999999998753

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-50  Score=415.57  Aligned_cols=257  Identities=24%  Similarity=0.350  Sum_probs=214.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      +.|+..+.||+|+||.||+|++..+|+.||||+++.......+.+.+|++++++++||||+++++++.+++..++|||||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            35778899999999999999999999999999998777777788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++|+|.+++.+....+++.++..++.||++||.|||+   ++|+||||||+|||++.++++||+|||+++...... ...
T Consensus        92 ~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~---~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~-~~~  167 (288)
T d2jfla1          92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRR  167 (288)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHH-HHH
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEEeecChhheeECCCCCEEEEechhhhccCCCc-ccc
Confidence            9999999987777789999999999999999999998   899999999999999999999999999997653321 123


Q ss_pred             eecccCccccCccccc-----cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          512 TVLAGTMGYMAPECAT-----TGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~-----~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                      ....||+.|+|||++.     ...++.++|||||||++|||++|+.||......+   ....   .. .+.......+  
T Consensus       168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~---~~~~---i~-~~~~~~~~~~--  238 (288)
T d2jfla1         168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR---VLLK---IA-KSEPPTLAQP--  238 (288)
T ss_dssp             TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG---HHHH---HH-HSCCCCCSSG--
T ss_pred             cccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH---HHHH---HH-cCCCCCCCcc--
Confidence            3467999999999984     4568999999999999999999999997654322   1111   11 1111111111  


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                           ......+.+++.+||++||++|||++|+++|.|+.
T Consensus       239 -----~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~  273 (288)
T d2jfla1         239 -----SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT  273 (288)
T ss_dssp             -----GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGC
T ss_pred             -----ccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence                 11224567888999999999999999999998875

>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=100.00  E-value=6.3e-50  Score=394.88  Aligned_cols=220  Identities=38%  Similarity=0.635  Sum_probs=195.2

Q ss_pred             CceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CC------CceEEEEeCCceecccCCCCCccceeEEEEEEEe
Q 042831           32 ASALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NR------ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVID  103 (645)
Q Consensus        32 ~~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~------~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~  103 (645)
                      +.+++|+|++|.+.   ++.|+ ||.+.++|.|+||+ ..      .++|||+|++||+||++.+++++||+|+|+|.|.
T Consensus         1 ~~~~sF~f~~F~~~---nl~l~GdA~i~~~g~l~LT~~~~~~~~~~~~~G~~~y~~Pi~l~~~~~~~~~sF~t~f~f~i~   77 (233)
T d1g8wa_           1 SNDIYFNFQRFNET---NLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTVASFATSFTFNIQ   77 (233)
T ss_dssp             CEEEEEEESSCCGG---GEEEEETCEECTTSCEECSCCCSTTCCCTTCEEEEEESSCEECBCTTTCCBEEEEEEEEEECC
T ss_pred             CCceEEECCCCCcC---cEEEeccEEECCCCEEEecCCCCCCCcccceeEEEEcCCCeEeecCCCCceeeEEEEEEEEEe
Confidence            35789999999854   79999 99987899999997 22      2789999999999999999999999999999999


Q ss_pred             eCCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC-CCCCCCceeeecCCCcccceee
Q 042831          104 SRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS-WDPTFSHVGIDINSVKSKKNVS  182 (645)
Q Consensus       104 ~~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~-~d~~~~hvgidvns~~s~~~~~  182 (645)
                      +.+...+||||||+|+|.+.  +.++.|++||+++..   +..++.|||||||++|. +||++||||||+|++.|..+..
T Consensus        78 ~~~~~~~gDGlAF~l~~~~~--~~g~~g~~lG~~~g~---~~~~~~vaVEFDT~~N~~~d~~~~Hvgi~~n~~~s~~~~~  152 (233)
T d1g8wa_          78 VPNNAGPADGLAFALVPVGS--QPKDKGGFLGLFDGS---NSNFHTVAVEFDTLYNKDWDPTERHIGIDVNSIRSIKTTR  152 (233)
T ss_dssp             CCSSCBCCEEEEEEEEETTC--CCCCCGGGTTTCCSS---CCCCCCEEEEEECSCCTTTCCSSCEEEEEESSSSCSEEEE
T ss_pred             cCCCCCCCCeEEEEEecCCC--CCCcccccCCccccC---CCcccEEEEEeecccCCCCCCCCCeEEEECCCcceeeecc
Confidence            88777789999999999875  456789999998753   34568899999999996 9999999999999999988777


Q ss_pred             ecccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeeccc---ceeeeEEEEEeec
Q 042831          183 WWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATG---VDFAIFSIYSWEF  259 (645)
Q Consensus       183 ~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg---~~~~~~~i~~wsf  259 (645)
                      +  ++.+|+.++|||+||+.+++|.|+|.+.+  ++..+++++.+||+++||++|||||||+||   +..|.|+|++|+|
T Consensus       153 ~--~~~~g~~~~~~I~yd~~~~~l~v~l~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~~~~~~h~I~sWsF  228 (233)
T d1g8wa_         153 W--DFVNGENAEVLITYDSSTNLLVASLVYPS--QKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSF  228 (233)
T ss_dssp             C--CCCTTCCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTBCCCCEEEEEEE
T ss_pred             c--cccCCcEEEEEEEEeCCCcEEEEEEEeCC--CCCcEEEEEEechhHcCCCcEEEEEEEEcCCCCCCceeeEEEEEEE
Confidence            6  57899999999999999999999998755  567889999999999999999999999999   4567899999999


Q ss_pred             cCcc
Q 042831          260 NSSL  263 (645)
Q Consensus       260 ~~~~  263 (645)
                      ++.+
T Consensus       229 ss~l  232 (233)
T d1g8wa_         229 ASKL  232 (233)
T ss_dssp             EEEE
T ss_pred             EEEc
Confidence            8864

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-50  Score=403.29  Aligned_cols=252  Identities=25%  Similarity=0.435  Sum_probs=214.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|+..++||+|+||+||+|+++ +++.||||.++.... ..++|.+|++++++++||||++++|+|.+++.+++||||+
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~   81 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM   81 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence            68899999999999999999986 578999999976533 4568999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      ++|+|..++......+++..+.+++.||++||.|||+   .+|+||||||+|||+++++.+||+|||+++..........
T Consensus        82 ~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~---~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  158 (258)
T d1k2pa_          82 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS  158 (258)
T ss_dssp             TTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCC
T ss_pred             CCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhh---cCcccccccceeEEEcCCCcEEECcchhheeccCCCceee
Confidence            9999999988777789999999999999999999998   8999999999999999999999999999987665544445


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      ....||+.|+|||.+.++.++.++|||||||++|||+| |+.||+.....   .+.    ....++..  ...|..    
T Consensus       159 ~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~---~~~----~~i~~~~~--~~~p~~----  225 (258)
T d1k2pa_         159 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS---ETA----EHIAQGLR--LYRPHL----  225 (258)
T ss_dssp             CCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH---HHH----HHHHTTCC--CCCCTT----
T ss_pred             cccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH---HHH----HHHHhCCC--CCCccc----
Confidence            55679999999999999999999999999999999998 89999755422   122    22222211  111221    


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                         ..+.+.+++.+||+.||++|||++|++++|.
T Consensus       226 ---~~~~l~~li~~cl~~dP~~RPt~~eil~~L~  256 (258)
T d1k2pa_         226 ---ASEKVYTIMYSCWHEKADERPTFKILLSNIL  256 (258)
T ss_dssp             ---CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             ---ccHHHHHHHHHHccCCHhHCcCHHHHHHHhh
Confidence               2246778899999999999999999999985

>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Peanut (Arachis hypogaea) [TaxId: 3818]

Probab=100.00  E-value=2.3e-49  Score=391.40  Aligned_cols=224  Identities=41%  Similarity=0.608  Sum_probs=192.6

Q ss_pred             CceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C-CCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCC
Q 042831           32 ASALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N-RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSS  108 (645)
Q Consensus        32 ~~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~-~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~  108 (645)
                      |.+++|+|++|.++ +.++.|+ ||.+.++|.|+||+ . .++.|||+|++||+||++.+++++||+|+|+|.|.+....
T Consensus         1 a~~~sF~~~~F~~~-~~~l~l~GdA~i~~~g~l~LT~~~~~~~~G~a~y~~Pi~l~~~~~~~~~sf~t~f~f~i~~~~~~   79 (232)
T d1v6ia_           1 AETVSFNFNSFSEG-NPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDY   79 (232)
T ss_dssp             CEEEEEEESSCCTT-CTTEEEEESCEECTTSCEECSCTTSTTCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECCSSS
T ss_pred             CccEEEECCCCCCC-CCCEEEeeeeEEcCCCEEEeCCCCCCCceEEEEcCCCEEccCCCCCccceeEEEEEEEeccCCCC
Confidence            45799999999986 5679999 99987889999998 3 4689999999999999999999999999999999998778


Q ss_pred             CCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC--CCCCCCceeeecCCCcccceeeeccc
Q 042831          109 YYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS--WDPTFSHVGIDINSVKSKKNVSWWSD  186 (645)
Q Consensus       109 ~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~--~d~~~~hvgidvns~~s~~~~~~~~~  186 (645)
                      .+||||||+|+|.....+....+   |+....+..+..++.|||||||++|.  +||+++|||||+|++.|.....+  +
T Consensus        80 ~~gDG~AF~l~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~aVEfDT~~n~~~~d~~~~Higid~n~~~s~~~~~~--~  154 (232)
T d1v6ia_          80 DPADGIIFFIAPEDTQIPAGSIG---GGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPW--N  154 (232)
T ss_dssp             BCCCEEEEEEEETTCCCCTTCCC---GGGTTTSCTTSEEEEEEEEEECSCCGGGTCCSSCEEEEEEEESSCSEEEEC--C
T ss_pred             CCCCeEEEEEECCCCCCCCCccC---CcccccccCCCCCceEEEEEEeEecCCCCCCCCccEeEeeCCccccccccc--c
Confidence            88999999999998665443222   22222223455678999999999987  78999999999999998877665  5


Q ss_pred             CCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccce-eeeEEEEEeeccCccc
Q 042831          187 VKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD-FAIFSIYSWEFNSSLE  264 (645)
Q Consensus       187 ~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~-~~~~~i~~wsf~~~~~  264 (645)
                      +.+|+.++|||+||+.+++|+|++.+.+   +..|.+++.|||+.+|+++|||||||+||.. .|.|+|++|+|++.+.
T Consensus       155 ~~~g~~~~v~I~Yd~~~~~L~V~~~~~~---~~~~~l~~~vdL~~~l~~~vyvGFSAsTG~~~~~~H~I~sWsFss~l~  230 (232)
T d1v6ia_         155 SVSGAVVKVTVIYDSSTKTLSVAVTNDN---GDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLI  230 (232)
T ss_dssp             CCTTCEEEEEEEEETTTTEEEEEEECTT---SCEEEEEEECCHHHHSCSEEEEEEEEECCSSBCCEEEEEEEEEEEEEC
T ss_pred             cCCCCEEEEEEEEeCCceEEEEEEecCC---CCcceEEEEEchhhccCCcEEEEEEEECCCCCCcccEEEEeEeEEeee
Confidence            7899999999999999999999998644   4567899999999999999999999999974 5899999999998765

>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

Probab=100.00  E-value=1.5e-49  Score=397.65  Aligned_cols=223  Identities=34%  Similarity=0.572  Sum_probs=195.8

Q ss_pred             CceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CC------CceEEEEeCCceecccCCCCCccceeEEEEEEEe
Q 042831           32 ASALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NR------ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVID  103 (645)
Q Consensus        32 ~~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~------~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~  103 (645)
                      |...+|+|++|++.   ++.++ ||.+ .++.|+||+ ..      .+.|||+|++||+|||+.+++++||+|+|+|.|.
T Consensus         1 a~~~sF~f~~F~~~---~l~l~GdA~~-~~~~l~LT~~~~~~~~~~~~~G~a~y~~pv~l~~~~~~~~~sF~t~F~F~i~   76 (253)
T d1g7ya_           1 ADIQSFSFKNFNSS---SFILQGDATV-SSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIF   76 (253)
T ss_dssp             CEEEEEEESSCCSS---CEEEEETCEE-ETTEEECSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECC
T ss_pred             CcccEEecCCCCcc---cEEEEeeeEE-cCCEEEeCCCCCCCCcccceeEEEEeCCCeEeecCCCCceeeEEEEEEEEEe
Confidence            35689999999754   79999 9999 678899998 22      2789999999999999999999999999999999


Q ss_pred             eCCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC-CCCCCCceeeecCCCcccceee
Q 042831          104 SRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS-WDPTFSHVGIDINSVKSKKNVS  182 (645)
Q Consensus       104 ~~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~-~d~~~~hvgidvns~~s~~~~~  182 (645)
                      +.....+||||||+|+|.+..  .+..||++|+++..+. ...++.|||||||++|. +||+++|||||+|++.|.++..
T Consensus        77 ~~~~~~ggDGlAF~l~~~~~~--~~~~~g~lgl~~~~~~-~~~~~~vaVEFDT~~n~~~d~~~~Hvgi~~ns~~s~~~~~  153 (253)
T d1g7ya_          77 APNKSSSADGIAFALVPVGSE--PKSNSGFLGVFDSDVY-DNSAQTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTAS  153 (253)
T ss_dssp             CSSGGGCCCEEEEEEEETTCC--CCCCGGGTTTCSCSSC-CGGGCCEEEEEECSCCTTTCCSSCEEEEEESSSSCSEEEE
T ss_pred             cCCCCCCCCceEEEEeCCCCC--CCCCcccccccccCCC-CCcCceEEEEEeceecCCCCCCCCcEEEeeCCcccccccC
Confidence            877677899999999998754  3467889999986543 44577899999999996 8999999999999999998877


Q ss_pred             ecccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeeccc---ceeeeEEEEEeec
Q 042831          183 WWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATG---VDFAIFSIYSWEF  259 (645)
Q Consensus       183 ~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg---~~~~~~~i~~wsf  259 (645)
                      +  ++.+|+.++|||+||+.+++|+|+|.+..  +|..|++++.+||+.+|+++|||||||+||   ...+.|+|++|+|
T Consensus       154 ~--~~~~g~~~~v~I~Yd~~~~~L~v~l~~~~--~~~~~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~~~~H~IlsWsF  229 (253)
T d1g7ya_         154 W--GLANGQNAEILITYNAATSLLVASLVHPS--RRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSF  229 (253)
T ss_dssp             C--CCCTTSEEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEECCSSSSCCCCCEEEEEEE
T ss_pred             C--CccCCCEEEEEEEEeCCcEEEEEEEecCC--CCCceEEEEEechhhcCCCcEEEEEEeEcCCCCCcccccEEEEEEe
Confidence            6  57899999999999999999999998643  677899999999999999999999999999   4678999999999


Q ss_pred             cCcccc
Q 042831          260 NSSLEM  265 (645)
Q Consensus       260 ~~~~~~  265 (645)
                      ++.+++
T Consensus       230 ~s~lp~  235 (253)
T d1g7ya_         230 ASKLPD  235 (253)
T ss_dssp             EEEECS
T ss_pred             EEeCCC
Confidence            886544

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-50  Score=411.63  Aligned_cols=256  Identities=26%  Similarity=0.403  Sum_probs=199.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee--CCeEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--KKELLLV  427 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~--~~~~~lV  427 (645)
                      ++|+..+.||+|+||+||+|++..+|+.||||.+...  .+...+.+.+|++++++++||||+++++++.+  .+.+++|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            5788899999999999999999999999999998754  34456779999999999999999999999865  4568999


Q ss_pred             EEecCCCChhhhhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhhc--CCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          428 YEFMPNGSLDSHLFK---ENSLLTWEFRYKIAQDLASGLLYLQEEW--EQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      ||||++|+|.+++.+   .+..+++..++.++.||+.||.|||+..  ..+|+||||||+|||++.++.+||+|||+++.
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence            999999999999864   3567999999999999999999999832  13499999999999999999999999999987


Q ss_pred             ccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      ..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..+.    ....++...   
T Consensus       164 ~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~---~~~~----~~i~~~~~~---  232 (269)
T d2java1         164 LNHDT-SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---KELA----GKIREGKFR---  232 (269)
T ss_dssp             C------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHH----HHHHHTCCC---
T ss_pred             cccCC-CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCH---HHHH----HHHHcCCCC---
Confidence            65432 233456899999999999999999999999999999999999999975332   1222    222223221   


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        .+...++    +.+.+++.+||+.||++|||++|+++|.|
T Consensus       233 --~~~~~~s----~~l~~li~~~L~~dp~~Rps~~ell~hp~  268 (269)
T d2java1         233 --RIPYRYS----DELNEIITRMLNLKDYHRPSVEEILENPL  268 (269)
T ss_dssp             --CCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred             --CCCcccC----HHHHHHHHHHcCCChhHCcCHHHHHhCCc
Confidence              1112222    35777889999999999999999998865

>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]

Probab=100.00  E-value=5.1e-49  Score=389.18  Aligned_cols=221  Identities=38%  Similarity=0.653  Sum_probs=194.9

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CC-----CceEEEEeCCceecccCCCCCccceeEEEEEEEeeC
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NR-----ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSR  105 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~-----~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~  105 (645)
                      .+++|+|++|.++ ..++.|+ ||.+.++|.|+||+ ..     .++|||||++||+||+..  .++||+|+|+|.|.+.
T Consensus         2 ~~~sF~f~~F~~~-~~~l~l~G~A~i~~~g~i~LT~~~~~~~~~~~~G~~~y~~Pv~l~~~~--~~~sF~t~f~f~i~~~   78 (233)
T d1n47a_           2 ESTSFSFTNFNPN-QNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDNT--TLASFTTSFSFVMAAP   78 (233)
T ss_dssp             EEEEEEESSCCTT-CTTEEEEETCEECTTSCEESSCBSSSSBCTTCEEEEEESSCEECBCSS--CBCEEEEEEEEECCCS
T ss_pred             CceEEEeCCCCCC-CCCeEEecceEECCCCEEEecCCCCCCcCCCceEEEEeCCCEEccCCC--eeeeEEEEEEEEEeCC
Confidence            4789999999876 5689999 99987889999998 32     479999999999999863  5899999999999988


Q ss_pred             CCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCcccceeeecc
Q 042831          106 NSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWS  185 (645)
Q Consensus       106 ~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~s~~~~~~~~  185 (645)
                      ....+||||||+|+|.+.  +.+..||+||+++..+. +..++.|||||||++|.+||++||||||+|++.|..+..+  
T Consensus        79 ~~~~~gDGlAF~l~~~~~--~~~~~gg~lGl~~~~~~-~~~~~~~aVefDT~~n~~d~~~~higi~~n~~~s~~~~~~--  153 (233)
T d1n47a_          79 AAAAVADGLAFFLAPPDT--QPQARGGFLGLFADRAH-DASYQTVAVEFDTYSNAWDPNYTHIGIDTNGIESKKTTPF--  153 (233)
T ss_dssp             STTSCCEEEEEEEECTTC--CCCCCGGGTTTCSSSSC-CGGGCCEEEEEECSCCTTSCSSCEEEEEESSSSCSEEEEC--
T ss_pred             CCCCCCCceEEEECCCCC--CCCCCCCccccccccCC-CCcCceEEEEEEeeecCCCCCCCceeEccCCccccccccc--
Confidence            777889999999999874  44567899999976543 4567789999999999999999999999999999888776  


Q ss_pred             cCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeeccc---ceeeeEEEEEeeccCc
Q 042831          186 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATG---VDFAIFSIYSWEFNSS  262 (645)
Q Consensus       186 ~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg---~~~~~~~i~~wsf~~~  262 (645)
                      ++.+|+.++|||+||+.+++|.|++.+..  ++..|.+++.+||+++|+++|||||||+||   ...|.|+|++|+|+++
T Consensus       154 ~l~~g~~~~v~I~Y~~~~~~l~v~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~~H~I~sWsFss~  231 (233)
T d1n47a_         154 DMVYGEKANIVITYQASTKALAASLVFPV--SQTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWSFAVS  231 (233)
T ss_dssp             CCCTTSCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCGGGTSCSEEEEEEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             eecCCCEEEEEEEEcCCCeEEEEEEEeCC--CCccEEEEEEechHHhcCCcEEEEEEEecCCCCCcccccEEEEEEeEEE
Confidence            57899999999999999999999998654  567889999999999999999999999999   5678999999999876


Q ss_pred             c
Q 042831          263 L  263 (645)
Q Consensus       263 ~  263 (645)
                      +
T Consensus       232 l  232 (233)
T d1n47a_         232 L  232 (233)
T ss_dssp             E
T ss_pred             c
Confidence            4

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-50  Score=411.41  Aligned_cols=254  Identities=28%  Similarity=0.451  Sum_probs=205.8

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ..++|...++||+|+||.||+|+++ +++.||||+++... ...++|.+|++++++++|||||+++|+|.+ +..++|||
T Consensus        11 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~E   87 (272)
T d1qpca_          11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE   87 (272)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             CHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEE
Confidence            3457788899999999999999986 47889999997543 345689999999999999999999998865 56789999


Q ss_pred             ecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          430 FMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       430 y~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |+++|+|.+++... ...++|..++.|+.||++||.|||+   ++|+||||||+|||+++++.+||+|||+++.......
T Consensus        88 y~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~---~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~  164 (272)
T d1qpca_          88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY  164 (272)
T ss_dssp             CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred             eCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccchhheeeecccceeeccccceEEccCCcc
Confidence            99999999987643 3469999999999999999999998   8999999999999999999999999999997765443


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      .......||+.|+|||++.++.++.++|||||||++|||+||..|+.....  ...+..    ...++.     .+....
T Consensus       165 ~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~--~~~~~~----~i~~~~-----~~~~p~  233 (272)
T d1qpca_         165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--NPEVIQ----NLERGY-----RMVRPD  233 (272)
T ss_dssp             ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHH----HHHTTC-----CCCCCT
T ss_pred             ccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCC--HHHHHH----HHHhcC-----CCCCcc
Confidence            344456789999999999999999999999999999999996655543222  111222    222221     111111


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .+    .+.+.+|+.+||+.||++||||+||++.|+
T Consensus       234 ~~----~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~  265 (272)
T d1qpca_         234 NC----PEELYQLMRLCWKERPEDRPTFDYLRSVLE  265 (272)
T ss_dssp             TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cC----hHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence            22    245778889999999999999999999885

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-49  Score=400.45  Aligned_cols=250  Identities=26%  Similarity=0.412  Sum_probs=203.0

Q ss_pred             CCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee----CCeEEEEE
Q 042831          355 NDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE----KKELLLVY  428 (645)
Q Consensus       355 ~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~----~~~~~lV~  428 (645)
                      ...++||+|+||+||+|++..+++.||+|++...  .....+.+.+|+++|++++||||+++++++..    +..+++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            3456799999999999999999999999998654  44556789999999999999999999999864    35689999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCC--eeeccCCCCCeEEC-CCCcEEEeeccCcccccc
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQC--VVHRDIKSSNIMLD-SNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~Dlkp~NILld-~~~~~kl~DfGla~~~~~  505 (645)
                      ||+++|+|.+++.+. ..+++..+..++.||++||+|||+   ++  |+||||||+|||++ +++.+||+|||+++....
T Consensus        92 E~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~gl~yLH~---~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~  167 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  167 (270)
T ss_dssp             ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             eCCCCCcHHHHHhcc-ccccHHHHHHHHHHHHHHHHHHHH---CCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence            999999999999654 568999999999999999999998   66  99999999999996 578999999999986432


Q ss_pred             cCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                         .......||+.|+|||++.+ .++.++|||||||++|||++|+.||......  .    .+......+...    +.
T Consensus       168 ---~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~--~----~~~~~i~~~~~~----~~  233 (270)
T d1t4ha_         168 ---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA--A----QIYRRVTSGVKP----AS  233 (270)
T ss_dssp             ---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH--H----HHHHHHTTTCCC----GG
T ss_pred             ---CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccH--H----HHHHHHHcCCCC----cc
Confidence               23345689999999998865 6999999999999999999999999743321  1    122222222211    11


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      +....+    ..+.+++.+||++||++|||++|+++|.|++
T Consensus       234 ~~~~~~----~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         234 FDKVAI----PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             GGGCCC----HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             cCccCC----HHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence            112222    3467788999999999999999999998863

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.1e-49  Score=416.64  Aligned_cols=267  Identities=24%  Similarity=0.324  Sum_probs=220.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      ++|...++||+|+||.||+|++..+|+.||||++........+.+.+|++++++++||||+++++++.+++.+++|||||
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            57999999999999999999999999999999998776667788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC--CCCcEEEeeccCcccccccCCc
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD--SNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld--~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      ++|+|.+++.+....+++..+..|+.||+.||.|||+   ++|+||||||+|||++  .++.+||+|||+++.....  .
T Consensus       106 ~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~--~  180 (350)
T d1koaa2         106 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK--Q  180 (350)
T ss_dssp             CSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT--S
T ss_pred             CCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh---cCCeeeeechhHeeeccCCCCeEEEeecchheecccc--c
Confidence            9999999997766789999999999999999999999   9999999999999995  4678999999999876533  3


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+...    ...+..  ..++.....
T Consensus       181 ~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~---~~~~~----i~~~~~--~~~~~~~~~  251 (350)
T d1koaa2         181 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD---ETLRN----VKSCDW--NMDDSAFSG  251 (350)
T ss_dssp             CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH----HHHTCC--CSCCGGGGG
T ss_pred             ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHH---HHHHH----HHhCCC--CCCcccccC
Confidence            344568999999999999999999999999999999999999999754321   12211    111111  011111111


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC-CCCCCCCCCC
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE-APLPALPPKM  636 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~-~~~p~~p~~~  636 (645)
                      .    .+.+.+++.+||+.||++|||++|+++|.|+. ...|..+...
T Consensus       252 ~----s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~~~~~~~~~  295 (350)
T d1koaa2         252 I----SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQI  295 (350)
T ss_dssp             C----CHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTTCCSCCCCB
T ss_pred             C----CHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCCCCchhhC
Confidence            2    24567788999999999999999999998875 3334433333

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-50  Score=409.38  Aligned_cols=254  Identities=27%  Similarity=0.431  Sum_probs=207.7

Q ss_pred             hcCCCCCC-ccCcCCcEEEEEEEEcC--CCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          351 TNDFNDDQ-KLGQGGFGGVYKGFFRE--TNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~-~LG~G~fG~Vy~g~~~~--~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .++|...+ +||+|+||.||+|.++.  ++..||||+++.. .....++|.+|+++|++++|||||+++|+|.. +.+++
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~l   85 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML   85 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEE
Confidence            34555555 49999999999998753  4568999999765 34557889999999999999999999999865 56899


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      |||||++|+|.+++...+..+++..+..++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus        86 vmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~  162 (285)
T d1u59a_          86 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD  162 (285)
T ss_dssp             EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred             EEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCcCchhheeeccCCceeeccchhhhccccc
Confidence            999999999999987777789999999999999999999999   89999999999999999999999999999876543


Q ss_pred             CCc--ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccC
Q 042831          507 KGS--QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD  583 (645)
Q Consensus       507 ~~~--~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d  583 (645)
                      ...  ......||+.|+|||++.++.++.++|||||||++|||+| |+.||......   .+.    ..+.+|...+   
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~---~~~----~~i~~~~~~~---  232 (285)
T d1u59a_         163 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVM----AFIEQGKRME---  232 (285)
T ss_dssp             SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---HHH----HHHHTTCCCC---
T ss_pred             ccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH---HHH----HHHHcCCCCC---
Confidence            322  2233568999999999999999999999999999999998 99999864432   122    2233333221   


Q ss_pred             ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          584 PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       584 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                        .....    ...+.+|+.+||+.||++||||.+|++.|+
T Consensus       233 --~p~~~----~~~l~~li~~cl~~~p~~RPs~~~i~~~L~  267 (285)
T d1u59a_         233 --CPPEC----PPELYALMSDCWIYKWEDRPDFLTVEQRMR  267 (285)
T ss_dssp             --CCTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             --CCCcC----CHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence              11222    245678889999999999999999988876

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-50  Score=409.32  Aligned_cols=256  Identities=25%  Similarity=0.426  Sum_probs=203.1

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCC----eEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETN----SYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~----~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      ..|+..++||+|+||.||+|.++.++    ..||||++... ......+|.+|++++++++|||||+++|+|.+.+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            46777899999999999999987654    47999999754 34456689999999999999999999999999999999


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      |||||.+++|.+++......++|.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus        87 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~  163 (283)
T d1mqba_          87 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  163 (283)
T ss_dssp             EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             EEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccc---cccccCccccceEEECCCCeEEEcccchhhcccCC
Confidence            999999999999888777889999999999999999999999   89999999999999999999999999999876543


Q ss_pred             CCc--ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          507 KGS--QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       507 ~~~--~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      ...  ......||+.|+|||++.++.++.++|||||||++|||++|+.|+......  ..+.    ....++..     +
T Consensus       164 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~--~~~~----~~i~~~~~-----~  232 (283)
T d1mqba_         164 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--HEVM----KAINDGFR-----L  232 (283)
T ss_dssp             ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHH----HHHHTTCC-----C
T ss_pred             CccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH--HHHH----HHHhccCC-----C
Confidence            222  223456899999999999999999999999999999999976665433221  1122    22222211     1


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                          ..+......+.+|+.+||+.||++||||+||++.|+.
T Consensus       233 ----~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~  269 (283)
T d1mqba_         233 ----PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK  269 (283)
T ss_dssp             ----CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             ----CCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHH
Confidence                1122233567889999999999999999999999975

>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Black locust (Robinia pseudoacacia) [TaxId: 35938]

Probab=100.00  E-value=4e-49  Score=391.86  Aligned_cols=224  Identities=38%  Similarity=0.668  Sum_probs=197.4

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C-----CCceEEEEeCCceecccCCCCCccceeEEEEEEEeeC
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N-----RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSR  105 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~-----~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~  105 (645)
                      .+++|+|++|.++ ..++.++ ||.+.++|.||||+ .     ..++|||+|++||+||++.+++++||+|+|+|.|.+.
T Consensus         2 ~~~sF~f~~F~~~-~~~l~l~G~A~v~~~g~i~LT~~~~~~~~~~~~G~~~y~~Pi~l~~~~~~~~~sF~t~F~F~i~~~   80 (237)
T d1fnya_           2 GSLSFSFPKFAPN-QPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTGNVASFVTSFTFIIQAP   80 (237)
T ss_dssp             EEEEEEESSCCTT-CTTEEEEETCEECTTSCEECSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCS
T ss_pred             ceEEEEeCCCCCC-CCCeEEcccEEEcCCCEEECCCCCCCCcccccEEEEEeCCCeEcccCCCCcceeeEEEEEEEEecC
Confidence            4789999999876 6789999 99988889999998 2     2478999999999999999999999999999999988


Q ss_pred             CCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC-CCCCCCceeeecCCCcccceeeec
Q 042831          106 NSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS-WDPTFSHVGIDINSVKSKKNVSWW  184 (645)
Q Consensus       106 ~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~-~d~~~~hvgidvns~~s~~~~~~~  184 (645)
                      ....+||||||+|+|.+.  +.+..||+||+++..+ .+..++.+||||||++|. +||+++|||||+|++.|..+... 
T Consensus        81 ~~~~~gDG~AF~l~~~~~--~~~~~gg~lg~~~~~~-~~~~~~~~aVefDT~~n~~~d~~~~Higi~~n~~~s~~~~~~-  156 (237)
T d1fnya_          81 NPATTADGLAFFLAPVDT--QPLDLGGMLGIFKDGY-FNKSNQIVAVEFDTFSNGDWDPKGRHLGINVNSIESIKTVPW-  156 (237)
T ss_dssp             STTSCCEEEEEEEEETTC--CCCCCGGGTTTCC----CCTTSCCEEEEEECSCCTTTCCSSSEEEEEESSSSCSEEEEC-
T ss_pred             CCCCCCCeeEEEEcCCCC--CcccccCcccccCCCC-ccCccceEEEEeccccccCCCCCCceEEEecCCCcccccccc-
Confidence            777889999999999875  3456788999997643 456788999999999996 89999999999999999877765 


Q ss_pred             ccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeeccc---ceeeeEEEEEeeccC
Q 042831          185 SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATG---VDFAIFSIYSWEFNS  261 (645)
Q Consensus       185 ~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg---~~~~~~~i~~wsf~~  261 (645)
                       ++.+|+.++|||+||+.+++|.|+|.+.+  ++..+++++.+||+.+++++|||||||+||   ...|.|+|++|+|++
T Consensus       157 -~~~~g~~~~v~I~Y~~~~~~l~v~l~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~s~~~e~H~I~sWsF~s  233 (237)
T d1fnya_         157 -NWTNGEVANVFISYEASTKSLTASLVYPS--LETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFES  233 (237)
T ss_dssp             -CCCTTCCEEEEEEEEGGGTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEEEEE
T ss_pred             -cccCCcEEEEEEEEeCCccEEEEEEEeCC--CCcceeEEEEechhhcCCCcEEEEEEEECCCCCCcccccEEEEeEeEE
Confidence             57799999999999999999999998765  466889999999999999999999999999   566899999999988


Q ss_pred             ccc
Q 042831          262 SLE  264 (645)
Q Consensus       262 ~~~  264 (645)
                      +++
T Consensus       234 ~lp  236 (237)
T d1fnya_         234 NLP  236 (237)
T ss_dssp             EEC
T ss_pred             eCC
Confidence            753

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-50  Score=419.02  Aligned_cols=267  Identities=25%  Similarity=0.368  Sum_probs=211.7

Q ss_pred             HhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEE
Q 042831          349 LATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       349 ~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ...++|+..++||+|+||+||+|++..+|+.||+|+++... ....+++.+|+.+|++++|||||+++++|.+++++++|
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iV   82 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   82 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            34678999999999999999999999999999999997653 34457889999999999999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      ||||++|+|.+++.+. ..+++..+..++.||++||.|||+.  .+|+||||||+|||++.++++||+|||+|+..... 
T Consensus        83 mEy~~gg~L~~~l~~~-~~l~~~~~~~~~~qil~aL~yLH~~--~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~-  158 (322)
T d1s9ja_          83 MEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-  158 (322)
T ss_dssp             EECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH-
T ss_pred             EEcCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHh--CCEEccccCHHHeeECCCCCEEEeeCCCccccCCC-
Confidence            9999999999999654 4689999999999999999999971  37999999999999999999999999999865432 


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC-----------C
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN-----------G  576 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~-----------~  576 (645)
                        ......||+.|+|||++.+..++.++||||+||++|||++|+.||............  .......           +
T Consensus       159 --~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  234 (322)
T d1s9ja_         159 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF--GCQVEGDAAETPPRPRTPG  234 (322)
T ss_dssp             --TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------
T ss_pred             --ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH--HHHhcCCcccCCccccccc
Confidence              233468999999999999999999999999999999999999999765432211000  0000000           0


Q ss_pred             cc--------------cc-------ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          577 KL--------------LE-------AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       577 ~l--------------~~-------~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..              .+       ...+.+..   ......+.+++.+||+.||++|||++|+++|.++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~  302 (322)
T d1s9ja_         235 RPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPS---GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK  302 (322)
T ss_dssp             -----------CCCCHHHHHHHHHTSCCCCCCB---TTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             ccccccccccccchhHHHHHhhhhccCCccCcc---ccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhC
Confidence            00              00       00000000   01124577788999999999999999999998763

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=5e-49  Score=414.16  Aligned_cols=264  Identities=20%  Similarity=0.261  Sum_probs=220.3

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|+..++||+|+||.||+|++..+|+.||||+++.......+.+.+|++++++++||||+++++++.+++.+++||||
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            35799999999999999999999999999999999877666677889999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC--CCCcEEEeeccCcccccccCC
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD--SNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld--~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |++|+|.+++...+..+++..++.|+.||+.||.|||+   .+|+||||||+|||++  .++.+||+|||+++.....  
T Consensus       108 ~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~--  182 (352)
T d1koba_         108 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD--  182 (352)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT--
T ss_pred             CCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccccccccccccCCCeEEEeecccceecCCC--
Confidence            99999999887777789999999999999999999998   9999999999999998  6789999999999876543  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      .......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+...    ...+...  .++....
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~---~~~~~----i~~~~~~--~~~~~~~  253 (352)
T d1koba_         183 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL---ETLQN----VKRCDWE--FDEDAFS  253 (352)
T ss_dssp             SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHHH----HHHCCCC--CCSSTTT
T ss_pred             CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH---HHHHH----HHhCCCC--CCccccc
Confidence            2344567999999999999999999999999999999999999999754321   22221    1111111  1111112


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCCCCCC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAPLPAL  632 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p~~  632 (645)
                      ..    ...+.+|+.+||+.||++|||++|+++|.|+......+
T Consensus       254 ~~----s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~~~~  293 (352)
T d1koba_         254 SV----SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNL  293 (352)
T ss_dssp             TS----CHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCTTC
T ss_pred             CC----CHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCcchh
Confidence            22    24567888999999999999999999998876544433

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-50  Score=408.38  Aligned_cols=254  Identities=22%  Similarity=0.309  Sum_probs=207.9

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|+..+.||+|+||+||+|++..+|+.||||++...   .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            4688899999999999999999999999999998643   2334567899999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC-
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK-  507 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~-  507 (645)
                      |||++|+|.+++... ..+++..+..++.|++.||.|||+   ++|+||||||+|||+++++.+||+|||+++...... 
T Consensus        88 Ey~~gg~L~~~~~~~-~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~  163 (288)
T d1uu3a_          88 SYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK  163 (288)
T ss_dssp             CCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred             EccCCCCHHHhhhcc-CCCCHHHHHHHHHHHHHHHHhhcc---ccEEcCcCCccccccCCCceEEecccccceecccCCc
Confidence            999999999988644 569999999999999999999999   999999999999999999999999999998765433 


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                      ........||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..+.    ....++..      .+.
T Consensus       164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~---~~~~----~~i~~~~~------~~p  230 (288)
T d1uu3a_         164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE---YLIF----QKIIKLEY------DFP  230 (288)
T ss_dssp             ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHH----HHHHTTCC------CCC
T ss_pred             ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCH---HHHH----HHHHcCCC------CCC
Confidence            2334456799999999999999999999999999999999999999975432   1111    22222221      111


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHH------HHHhccC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQV------IHVLNFE  626 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev------l~~L~~~  626 (645)
                      ..+    ...+.+|+.+||+.||++|||++|+      ++|.+++
T Consensus       231 ~~~----s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~  271 (288)
T d1uu3a_         231 EKF----FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE  271 (288)
T ss_dssp             TTC----CHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGT
T ss_pred             ccC----CHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccC
Confidence            122    2456788899999999999999985      5665554

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-49  Score=410.44  Aligned_cols=257  Identities=28%  Similarity=0.389  Sum_probs=207.9

Q ss_pred             hhcCCCCCCccCcCCcEEEEEEEEcCCC-----eEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCC
Q 042831          350 ATNDFNDDQKLGQGGFGGVYKGFFRETN-----SYIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKK  422 (645)
Q Consensus       350 ~~~~f~~~~~LG~G~fG~Vy~g~~~~~~-----~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~  422 (645)
                      ..++|+..++||+|+||+||+|++..++     ..||+|.+... .......+.+|+.++.++ +|||||+++++|.+.+
T Consensus        35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~  114 (325)
T d1rjba_          35 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  114 (325)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence            4467888999999999999999987544     37999998654 334557899999999998 8999999999999999


Q ss_pred             eEEEEEEecCCCChhhhhhhcC----------------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCC
Q 042831          423 ELLLVYEFMPNGSLDSHLFKEN----------------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIK  480 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk  480 (645)
                      ..++|||||++|+|.+++....                      ..+++..++.++.||++||.|||+   ++|+|||||
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~---~~IiHRDlK  191 (325)
T d1rjba_         115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA  191 (325)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCS
T ss_pred             eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCc
Confidence            9999999999999999996543                      358999999999999999999999   899999999


Q ss_pred             CCCeEECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCC
Q 042831          481 SSNIMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKA  558 (645)
Q Consensus       481 p~NILld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~  558 (645)
                      |+|||++.++.+||+|||+|+........ ......||+.|||||++.++.++.++|||||||+||||++ |+.||....
T Consensus       192 p~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~  271 (325)
T d1rjba_         192 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  271 (325)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC
Confidence            99999999999999999999876544332 2234568999999999999999999999999999999997 899997644


Q ss_pred             CCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          559 PQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       559 ~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ...  .+    .....++..     +..    +....+.+.+|+.+||+.||++||||+||+++|.
T Consensus       272 ~~~--~~----~~~~~~~~~-----~~~----p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         272 VDA--NF----YKLIQNGFK-----MDQ----PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             CSH--HH----HHHHHTTCC-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHH--HH----HHHHhcCCC-----CCC----CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            321  11    122222211     111    1112346778899999999999999999999984

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-49  Score=399.51  Aligned_cols=246  Identities=27%  Similarity=0.411  Sum_probs=198.1

Q ss_pred             CccCcCCcEEEEEEEEcC--CCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEecCC
Q 042831          358 QKLGQGGFGGVYKGFFRE--TNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFMPN  433 (645)
Q Consensus       358 ~~LG~G~fG~Vy~g~~~~--~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~~~  433 (645)
                      ++||+|+||.||+|.+..  +++.||||+++..  .....++|.+|++++++++|||||+++|+|.. +..+||||||++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            579999999999998753  4578999998653  33446789999999999999999999999965 457899999999


Q ss_pred             CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcc--e
Q 042831          434 GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQ--T  511 (645)
Q Consensus       434 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~--~  511 (645)
                      |+|.+++.+ ...+++..+..|+.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.........  .
T Consensus        92 g~L~~~l~~-~~~l~~~~~~~i~~qi~~gl~ylH~---~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~  167 (277)
T d1xbba_          92 GPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ  167 (277)
T ss_dssp             EEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC-
T ss_pred             CcHHHHHhh-ccCCCHHHHHHHHHHHHHHHhhHHh---CCcccCCCcchhhcccccCcccccchhhhhhccccccccccc
Confidence            999998864 4569999999999999999999998   899999999999999999999999999998765433322  2


Q ss_pred             eecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCC
Q 042831          512 TVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDF  590 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~  590 (645)
                      ....||+.|+|||.+.++.++.++|||||||++|||++ |+.||......   .    +...+.++....     ....+
T Consensus       168 ~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~---~----~~~~i~~~~~~~-----~p~~~  235 (277)
T d1xbba_         168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---E----VTAMLEKGERMG-----CPAGC  235 (277)
T ss_dssp             ---CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---H----HHHHHHTTCCCC-----CCTTC
T ss_pred             cccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH---H----HHHHHHcCCCCC-----CCccc
Confidence            34578999999999999999999999999999999998 89999754321   1    222233332211     11122


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          591 DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       591 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                          ...+.+|+.+||+.||++||||++|++.|+
T Consensus       236 ----~~~~~~li~~cl~~dp~~RPs~~~i~~~L~  265 (277)
T d1xbba_         236 ----PREMYDLMNLCWTYDVENRPGFAAVELRLR  265 (277)
T ss_dssp             ----CHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence                245678889999999999999999987764

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.8e-49  Score=407.64  Aligned_cols=257  Identities=21%  Similarity=0.332  Sum_probs=196.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .+.|+..+.||+|+||+||+|+++.+|+.||||++.... ....+.+.+|++++++++||||+++++++.+++.+++|||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            456888999999999999999999999999999997543 2334568899999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC---CCCcEEEeeccCccccccc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD---SNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld---~~~~~kl~DfGla~~~~~~  506 (645)
                      ||++|+|.+++.+ ...+++..+..++.||+.||.|||+   ++|+||||||+|||+.   +++.+||+|||+++.....
T Consensus        88 ~~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~  163 (307)
T d1a06a_          88 LVSGGELFDRIVE-KGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG  163 (307)
T ss_dssp             CCCSCBHHHHHHT-CSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCC---------
T ss_pred             ccCCCcHHHhhhc-ccCCCHHHHHHHHHHHHHHHHhhhh---ceeeeEEecccceeecccCCCceEEEeccceeEEccCC
Confidence            9999999999964 4579999999999999999999998   9999999999999994   5789999999999865432


Q ss_pred             CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                      .  ......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+.    ....++...  .+...
T Consensus       164 ~--~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~---~~~----~~i~~~~~~--~~~~~  232 (307)
T d1a06a_         164 S--VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA---KLF----EQILKAEYE--FDSPY  232 (307)
T ss_dssp             -----------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHH----HHHHTTCCC--CCTTT
T ss_pred             C--eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHH---HHH----HHHhccCCC--CCCcc
Confidence            2  234467999999999999999999999999999999999999999753321   111    112222211  11111


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ....    ...+.+++.+||+.||++|||++|+++|.++.
T Consensus       233 ~~~~----s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~  268 (307)
T d1a06a_         233 WDDI----SDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA  268 (307)
T ss_dssp             TTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTT
T ss_pred             ccCC----CHHHHHHHHHHccCCHhHCcCHHHHhcCHhhC
Confidence            1222    24577888999999999999999999998875

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1e-48  Score=404.60  Aligned_cols=250  Identities=24%  Similarity=0.346  Sum_probs=206.5

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .|+..++||+|+||.||+|++..+|+.||||+++...   ....+++.+|++++++++|||||++++++.+++..++|||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            4888899999999999999999999999999987543   3445679999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      ||++|+|..++. .+..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....    
T Consensus        96 ~~~~g~l~~~~~-~~~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~----  167 (309)
T d1u5ra_          96 YCLGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----  167 (309)
T ss_dssp             CCSEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS----
T ss_pred             ecCCCchHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEECCCCCEEEeecccccccCC----
Confidence            999999976654 44679999999999999999999999   8999999999999999999999999999986533    


Q ss_pred             ceeecccCccccCcccccc---CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccc
Q 042831          510 QTTVLAGTMGYMAPECATT---GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRL  586 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~---~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l  586 (645)
                       .....||+.|+|||++.+   +.++.++|||||||++|||++|+.||......      +....... +......    
T Consensus       168 -~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~------~~~~~i~~-~~~~~~~----  235 (309)
T d1u5ra_         168 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQ-NESPALQ----  235 (309)
T ss_dssp             -BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHH-SCCCCCS----
T ss_pred             -CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHh-CCCCCCC----
Confidence             234579999999999854   46899999999999999999999999754321      11111111 1111111    


Q ss_pred             cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          587 CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       587 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ...+    .+.+.+++.+||+.||++|||++|+++|.+..
T Consensus       236 ~~~~----s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~  271 (309)
T d1u5ra_         236 SGHW----SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL  271 (309)
T ss_dssp             CTTS----CHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHH
T ss_pred             CCCC----CHHHHHHHHHHCcCChhHCcCHHHHHhCHHhc
Confidence            1112    24577888999999999999999999988764

>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]

Probab=100.00  E-value=1.5e-47  Score=381.51  Aligned_cols=224  Identities=36%  Similarity=0.706  Sum_probs=197.9

Q ss_pred             ceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C------CCceEEEEeCCceecccCCCCCccceeEEEEEEEee
Q 042831           33 SALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N------RETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDS  104 (645)
Q Consensus        33 ~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~------~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~  104 (645)
                      .+++|+|++|.++ ..++.|+ ||.+ .++.|+||+ .      ..++|||+|++||+||++.+++++||+|+|+|.|..
T Consensus         2 ~~~sF~f~~F~~~-~~~l~l~G~A~i-~~~~i~LT~~~~~~~~~~~~~G~~~y~~Pi~l~~~~~~~~~sF~t~F~f~i~~   79 (241)
T d1ukga_           2 DSLSFGFPTFPSD-QKNLIFQGDAQI-KNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEKSSSRVANFQSQFSFSLKS   79 (241)
T ss_dssp             CEEEEEESSCCSC-CSSEEEEETCEE-ETTEEECSCBCTTSCBCSSEEEEEEESSCEECEETTTTEEEEEEEEEEEEEEC
T ss_pred             ccEEEEeCCCCCC-CCCEEEeeeEEE-eCCEEEeCCCCCCCCccccceEEEEeCCCeecccCCCCceeeeEEEEEEEEec
Confidence            4789999999876 5689999 9999 578899998 2      237899999999999999999999999999999987


Q ss_pred             CCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCC-CCCCCCCEEEEEEecccCC----CCCCCCceeeecCCCcccc
Q 042831          105 RNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNE-PLNSSIPFVAVEFDVYVNS----WDPTFSHVGIDINSVKSKK  179 (645)
Q Consensus       105 ~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~-~~~~~~~~vaVEfDt~~n~----~d~~~~hvgidvns~~s~~  179 (645)
                      +. ...|||+|||++|.....|...+|+++|+++... .+...++.|||||||++|.    +||++||||||+|++.|.+
T Consensus        80 ~~-~~~~~g~~f~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~n~~vaVEfDt~~n~~~~~~~~~~~Higid~n~~~s~~  158 (241)
T d1ukga_          80 PL-SNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVK  158 (241)
T ss_dssp             SS-SSCCCEEEEEEECTTCCCCTTCCGGGTTTSCGGGTTCGGGCCCEEEEEECCCCTTTCTTSCSSCEEEEEESSSSCSE
T ss_pred             CC-CCCCCceEEEEeCCCCCcccccCcccccccccccccCCccCcccceeccCEecCccCCCCCCCccEeeecCCccccc
Confidence            64 4569999999999887778888899999987654 3356789999999999874    5789999999999999988


Q ss_pred             eeeecccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccceeeeEEEEEeec
Q 042831          180 NVSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEF  259 (645)
Q Consensus       180 ~~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~wsf  259 (645)
                      +..+  ++.+|+.++|||+||+.+++|+|++...+   +..|.+++.|||+++|+++|||||||+||...|.|+|++|+|
T Consensus       159 ~~~~--~~~~g~~~~v~I~Yd~~~~~L~v~~~~~~---~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~~~H~IlsWsF  233 (241)
T d1ukga_         159 TVKW--DRRDGQSLNVLVTFNPSTRNLDVVATYSD---GTRYEVSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWSF  233 (241)
T ss_dssp             EEEC--CCCTTCCEEEEEEEETTTTEEEEEEEETT---CCEEEEEEECCGGGTSCSEEEEEEEEEESSSCCEEEEEEEEE
T ss_pred             cccc--ccCCCcEEEEEEEEeCCCcEEEEEEccCC---CCceEEEEEEehHHhCCCcEEEEEEEecCCCCceeEEEEeEE
Confidence            7765  57899999999999999999999998744   556789999999999999999999999999999999999999


Q ss_pred             cCccc
Q 042831          260 NSSLE  264 (645)
Q Consensus       260 ~~~~~  264 (645)
                      ++.++
T Consensus       234 ss~l~  238 (241)
T d1ukga_         234 TSTLL  238 (241)
T ss_dssp             EEEEE
T ss_pred             EEEee
Confidence            98765

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-49  Score=401.49  Aligned_cols=254  Identities=30%  Similarity=0.449  Sum_probs=200.3

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|+..+.||+|+||.||+|+++++ +.||||+++... ...+.|.+|+.++++++|||||+++|+|.+ +..++||||
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey   92 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY   92 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEe
Confidence            35788899999999999999999764 679999986543 345789999999999999999999999865 567899999


Q ss_pred             cCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          431 MPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       431 ~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |++|+|..++... ...++|.+++.|+.||+.||+|||+   ++|+||||||+|||+|.++.+||+|||+++........
T Consensus        93 ~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~---~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~  169 (285)
T d1fmka3          93 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT  169 (285)
T ss_dssp             CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred             cCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhh---hheecccccceEEEECCCCcEEEcccchhhhccCCCce
Confidence            9999999888753 4579999999999999999999999   89999999999999999999999999999877554444


Q ss_pred             ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCC
Q 042831          510 QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRD  589 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~  589 (645)
                      ......||+.|+|||++..+.++.++|||||||++|||++|..|+.....  ...+..++    ..+.     .+.....
T Consensus       170 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~--~~~~~~~i----~~~~-----~~~~~~~  238 (285)
T d1fmka3         170 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--NREVLDQV----ERGY-----RMPCPPE  238 (285)
T ss_dssp             ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHH----HTTC-----CCCCCTT
T ss_pred             eeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCC--HHHHHHHH----HhcC-----CCCCCcc
Confidence            44556799999999999999999999999999999999997766654332  11222222    2221     1111122


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          590 FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       590 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .    .+.+.+++.+||+.||++||||++|++.|+.
T Consensus       239 ~----~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  270 (285)
T d1fmka3         239 C----PESLHDLMCQCWRKEPEERPTFEYLQAFLED  270 (285)
T ss_dssp             S----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             c----CHHHHHHHHHHcccCHhHCcCHHHHHHHHhh
Confidence            2    3467788999999999999999999998864

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-48  Score=398.58  Aligned_cols=257  Identities=22%  Similarity=0.291  Sum_probs=212.0

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC------hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS------KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~------~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~  424 (645)
                      .++|...+.||+|+||+||+|++..+|+.||||+++...      ....+.+.+|+++|++++||||+++++++.+++.+
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            357888999999999999999999999999999986432      12357899999999999999999999999999999


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC----cEEEeeccCc
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF----NAKIGDFGLA  500 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~----~~kl~DfGla  500 (645)
                      +||||||++|+|.+++.+. ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++    .+||+|||++
T Consensus        89 ~iv~E~~~gg~L~~~i~~~-~~l~~~~~~~~~~qi~~al~yLH~---~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a  164 (293)
T d1jksa_          89 ILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  164 (293)
T ss_dssp             EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEEEcCCCccccchhccc-cccchhHHHHHHHHHHHHHHhhhh---cceeecccccceEEEecCCCcccceEecchhhh
Confidence            9999999999999998654 469999999999999999999999   9999999999999998776    5999999999


Q ss_pred             ccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc
Q 042831          501 RLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE  580 (645)
Q Consensus       501 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~  580 (645)
                      +......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||......   ...    .....+... 
T Consensus       165 ~~~~~~~--~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~---~~~----~~i~~~~~~-  234 (293)
T d1jksa_         165 HKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---ETL----ANVSAVNYE-  234 (293)
T ss_dssp             EECTTSC--BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH----HHHHTTCCC-
T ss_pred             hhcCCCc--cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHH---HHH----HHHHhcCCC-
Confidence            8764332  334457899999999999999999999999999999999999999754321   111    111122110 


Q ss_pred             ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       581 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                       ..+......    ...+.+++.+||+.||++|||++|+++|.++.
T Consensus       235 -~~~~~~~~~----s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~  275 (293)
T d1jksa_         235 -FEDEYFSNT----SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK  275 (293)
T ss_dssp             -CCHHHHTTS----CHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTC
T ss_pred             -CCchhcCCC----CHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence             011111111    24567888999999999999999999999886

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-48  Score=396.12  Aligned_cols=254  Identities=25%  Similarity=0.379  Sum_probs=199.4

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCC---CeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRET---NSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~---~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .++|+..+.||+|+||.||+|++..+   +..||||.++.. .....+.|.+|++++++++||||++++++|. ++..++
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i   84 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   84 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence            35788889999999999999998643   467999998654 3445678999999999999999999999996 467899


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ||||+++|+|.+++......+++..++.++.||++||.|||+   ++|+||||||+||+++.++.+||+|||+++.....
T Consensus        85 v~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~  161 (273)
T d1mp8a_          85 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS  161 (273)
T ss_dssp             EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred             EEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcc---cCeeccccchhheeecCCCcEEEccchhheeccCC
Confidence            999999999999987777889999999999999999999999   99999999999999999999999999999877655


Q ss_pred             CCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcc
Q 042831          507 KGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPR  585 (645)
Q Consensus       507 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~  585 (645)
                      .........||+.|+|||++.++.++.++|||||||++|||++ |+.||......   .+...    ..++...     .
T Consensus       162 ~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~---~~~~~----i~~~~~~-----~  229 (273)
T d1mp8a_         162 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIGR----IENGERL-----P  229 (273)
T ss_dssp             ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHHHH----HHTTCCC-----C
T ss_pred             cceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH---HHHHH----HHcCCCC-----C
Confidence            5445556678999999999999999999999999999999998 89999765432   22222    2223221     1


Q ss_pred             ccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          586 LCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       586 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      .....    .+.+.+|+..||+.||++|||++||+++|+
T Consensus       230 ~~~~~----~~~~~~li~~cl~~dp~~Rps~~ei~~~L~  264 (273)
T d1mp8a_         230 MPPNC----PPTLYSLMTKCWAYDPSRRPRFTELKAQLS  264 (273)
T ss_dssp             CCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCC----CHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            11222    246778889999999999999999999986

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-48  Score=401.96  Aligned_cols=254  Identities=24%  Similarity=0.427  Sum_probs=204.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCe----EEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNS----YIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~----~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~l  426 (645)
                      .+|+..++||+|+||+||+|.+..+|+    .||+|+++.. +.+..++|.+|++++++++|||||+++|+|.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            468889999999999999999987765    6899988654 445678899999999999999999999999865 5678


Q ss_pred             EEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccccccc
Q 042831          427 VYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHA  506 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~  506 (645)
                      ++||+.+|+|.+++......+++..++.++.|||+||.|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus        88 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~---~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  164 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  164 (317)
T ss_dssp             EEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTT
T ss_pred             EEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHH---cCcccCcchhhcceeCCCCCeEeeccccceecccc
Confidence            899999999999998888889999999999999999999999   89999999999999999999999999999876543


Q ss_pred             CCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          507 KGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       507 ~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      ... ......||+.|+|||++.++.++.++|||||||+||||+| |+.||......+   +..    ...++...     
T Consensus       165 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~---~~~----~i~~~~~~-----  232 (317)
T d1xkka_         165 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISS----ILEKGERL-----  232 (317)
T ss_dssp             CC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG---HHH----HHHHTCCC-----
T ss_pred             cccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH---HHH----HHHcCCCC-----
Confidence            332 2334568999999999999999999999999999999998 888987544322   222    12222111     


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                          ..+......+.+|+.+||+.||++|||++|++++|+.
T Consensus       233 ----~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~  269 (317)
T d1xkka_         233 ----PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK  269 (317)
T ss_dssp             ----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHH
Confidence                1111223467788999999999999999999999864

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.7e-48  Score=399.05  Aligned_cols=263  Identities=26%  Similarity=0.397  Sum_probs=213.6

Q ss_pred             HHHHHhhcCCCCCCccCcCCcEEEEEEEEcC-----CCeEEEEEEeccCC-hhhHHHHHHHHHHHHhcCCCCccEEEeee
Q 042831          345 KELALATNDFNDDQKLGQGGFGGVYKGFFRE-----TNSYIAVKRVSQGS-KQGIKEYASEVKIISRLRHRNLVQLLGWC  418 (645)
Q Consensus       345 ~el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~  418 (645)
                      .+++...++|+..+.||+|+||+||+|++++     +++.||||+++... .+..++|.+|++++++++||||++++++|
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~   85 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC   85 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence            3455566789999999999999999999863     46789999997653 34567899999999999999999999999


Q ss_pred             eeCCeEEEEEEecCCCChhhhhhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCee
Q 042831          419 HEKKELLLVYEFMPNGSLDSHLFKEN-----------------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVV  475 (645)
Q Consensus       419 ~~~~~~~lV~Ey~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv  475 (645)
                      ...+..++||||+++|+|.+++....                       ..+++..++.|+.|++.||+|||+   ++++
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~---~~iv  162 (301)
T d1lufa_          86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFV  162 (301)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCC
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc---CCeE
Confidence            99999999999999999999986421                       248999999999999999999998   9999


Q ss_pred             eccCCCCCeEECCCCcEEEeeccCcccccccCC-cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCC-CC
Q 042831          476 HRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG-SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR-KP  553 (645)
Q Consensus       476 H~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~-~p  553 (645)
                      ||||||+|||+|.++.+||+|||+++....... .......|++.|+|||++.+..++.++|||||||++|||++|. .|
T Consensus       163 HrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p  242 (301)
T d1lufa_         163 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP  242 (301)
T ss_dssp             CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             eeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCC
Confidence            999999999999999999999999986644332 2334567899999999999999999999999999999999986 56


Q ss_pred             CCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          554 INPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       554 f~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      |......   .+..    ...++....     .....    ...+.+|+.+||+.||++||||.||+++|+.-
T Consensus       243 ~~~~~~~---e~~~----~v~~~~~~~-----~p~~~----~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i  299 (301)
T d1lufa_         243 YYGMAHE---EVIY----YVRDGNILA-----CPENC----PLELYNLMRLCWSKLPADRPSFCSIHRILQRM  299 (301)
T ss_dssp             TTTSCHH---HHHH----HHHTTCCCC-----CCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             CCCCCHH---HHHH----HHHcCCCCC-----CCccc----hHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            7643321   2222    223333221     11122    24677889999999999999999999999753

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-47  Score=399.10  Aligned_cols=253  Identities=28%  Similarity=0.387  Sum_probs=213.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|...+.||+|+||.||+|++..+|+.||||+++..   .....+.+.+|+.+|++++||||+++++++.+++.+++||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            5788899999999999999999999999999999753   2334678899999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |||++|+|.+++.+. ..+++...+.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..... .
T Consensus        85 ey~~gg~L~~~~~~~-~~~~e~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~-~  159 (337)
T d1o6la_          85 EYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-G  159 (337)
T ss_dssp             ECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-T
T ss_pred             eccCCCchhhhhhcc-cCCcHHHHHHHHHHHhhhhhhhhh---cCccccccCHHHeEecCCCCEEEeecccccccccC-C
Confidence            999999999988654 468999999999999999999999   99999999999999999999999999999865432 2


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+..    ....+..      .+..
T Consensus       160 ~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~---~~~~----~i~~~~~------~~p~  226 (337)
T d1o6la_         160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLFE----LILMEEI------RFPR  226 (337)
T ss_dssp             CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCC------CCCT
T ss_pred             cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHH---HHHH----HHhcCCC------CCCc
Confidence            3344568999999999999999999999999999999999999999864421   2222    2222221      1112


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPS-----IRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~~  626 (645)
                      .++    ..+.+|+..||++||++||+     ++|+++|.++.
T Consensus       227 ~~s----~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~  265 (337)
T d1o6la_         227 TLS----PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL  265 (337)
T ss_dssp             TSC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGT
T ss_pred             cCC----HHHHHHHHhhccCCchhhcccccccHHHHHcCcccc
Confidence            222    35677889999999999994     89999998874

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-48  Score=396.59  Aligned_cols=275  Identities=23%  Similarity=0.271  Sum_probs=209.5

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChh-----hHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEec
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQ-----GIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEFM  431 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey~  431 (645)
                      +++||+|+||+||+|++..+|+.||||+++.....     ..+.+.+|++++++++||||+++++++..++..++||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            57899999999999999999999999998654221     2356889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCcce
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGSQT  511 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~~~  511 (645)
                      .++++..+. ..+..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....... ..
T Consensus        83 ~~~~~~~~~-~~~~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~-~~  157 (299)
T d1ua2a_          83 ETDLEVIIK-DNSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR-AY  157 (299)
T ss_dssp             SEEHHHHHT-TCCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC-CC
T ss_pred             cchHHhhhh-hcccCCCHHHHHHHHHHHHHHHHHhhc---cceecccCCcceEEecCCCccccccCccccccCCCcc-cc
Confidence            887766554 456678999999999999999999999   9999999999999999999999999999986544322 23


Q ss_pred             eecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccC-------
Q 042831          512 TVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVD-------  583 (645)
Q Consensus       512 ~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d-------  583 (645)
                      ....||+.|+|||++..+ .++.++|||||||++|||++|+.||......   .....+.+...........+       
T Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~---~~l~~i~~~~~~~~~~~~~~~~~~~~~  234 (299)
T d1ua2a_         158 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL---DQLTRIFETLGTPTEEQWPDMCSLPDY  234 (299)
T ss_dssp             CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHHCCCCTTTSSSTTSSTTC
T ss_pred             cceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHH---HHHHHHHHhcCCCChhhccchhccchh
Confidence            345799999999998755 5799999999999999999999999754432   22333333222111100000       


Q ss_pred             --ccccCCCCHH-----HHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC-CCCCCCCCCCCCC
Q 042831          584 --PRLCRDFDGQ-----QIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE-APLPALPPKMPVP  639 (645)
Q Consensus       584 --~~l~~~~~~~-----~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~-~~~p~~p~~~p~~  639 (645)
                        -......+..     ..+.+.+|+.+||+.||++|||++|+++|.++. .|.|.-+...|.|
T Consensus       235 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~p~~~~~~p~p  298 (299)
T d1ua2a_         235 VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRP  298 (299)
T ss_dssp             CCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCCCCSSSSCCC
T ss_pred             hhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCCCCCCCCCCCC
Confidence              0000111111     124678889999999999999999999999875 5555544444443

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.7e-47  Score=396.76  Aligned_cols=250  Identities=27%  Similarity=0.370  Sum_probs=209.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|+..++||+|+||+||+|+++.+|+.||||+++..   .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            4688899999999999999999999999999998643   2334678999999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |||++|+|..++.. +..+++.....++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....  
T Consensus        84 E~~~gg~l~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~--  157 (316)
T d1fota_          84 DYIEGGELFSLLRK-SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--  157 (316)
T ss_dssp             CCCCSCBHHHHHHH-TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--
T ss_pred             eecCCccccccccc-cccccccHHHHHHHHHHHhhhhhcc---CcEEccccCchheeEcCCCCEEEecCccceEeccc--
Confidence            99999999887754 4568899999999999999999998   99999999999999999999999999999875432  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                        .....||+.|+|||++.+..++.++|||||||+||||++|+.||......   .+..    ...++..      .+..
T Consensus       158 --~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~---~~~~----~i~~~~~------~~p~  222 (316)
T d1fota_         158 --TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM---KTYE----KILNAEL------RFPP  222 (316)
T ss_dssp             --BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHH----HHHHCCC------CCCT
T ss_pred             --cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHH---HHHH----HHHcCCC------CCCC
Confidence              23467999999999999999999999999999999999999999754321   1111    1112211      1111


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~  626 (645)
                      ..+    ..+.+++.+||++||++||     |++|+++|.++.
T Consensus       223 ~~s----~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~  261 (316)
T d1fota_         223 FFN----EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFK  261 (316)
T ss_dssp             TSC----HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGS
T ss_pred             CCC----HHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccc
Confidence            222    3567788999999999996     999999998864

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=7.7e-47  Score=384.54  Aligned_cols=256  Identities=22%  Similarity=0.305  Sum_probs=210.2

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh---------hhHHHHHHHHHHHHhcC-CCCccEEEeeeeeC
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK---------QGIKEYASEVKIISRLR-HRNLVQLLGWCHEK  421 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~---------~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~  421 (645)
                      ++|+..+.||+|+||+||+|++..+|+.||||+++....         ...+.+.+|+.++++++ ||||+++++++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            578889999999999999999999999999999865421         12346889999999997 99999999999999


Q ss_pred             CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          422 KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      +..+||||||++|+|.+++..+ ..+++.+++.++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+++
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~  158 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSC  158 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             cceEEEEEcCCCchHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---cCCcccccccceEEEcCCCCeEEccchhee
Confidence            9999999999999999999654 468999999999999999999998   899999999999999999999999999998


Q ss_pred             cccccCCcceeecccCccccCcccccc------CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATT------GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN  575 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~  575 (645)
                      ......  ......||+.|+|||.+.+      ..++.++||||+||++|||++|+.||......   ..    .....+
T Consensus       159 ~~~~~~--~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~---~~----~~~i~~  229 (277)
T d1phka_         159 QLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM---LM----LRMIMS  229 (277)
T ss_dssp             ECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH----HHHHHH
T ss_pred             EccCCC--ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHH---HH----HHHHHh
Confidence            765432  3344679999999998853      34688999999999999999999999854321   11    112222


Q ss_pred             CccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          576 GKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       576 ~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      +... . .......    ..+.+.+++.+||++||++|||++|+++|.|+.
T Consensus       230 ~~~~-~-~~~~~~~----~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~  274 (277)
T d1phka_         230 GNYQ-F-GSPEWDD----YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ  274 (277)
T ss_dssp             TCCC-C-CTTTGGG----SCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             CCCC-C-CCccccc----CCHHHHHHHHHHccCChhHCcCHHHHHcCHHHH
Confidence            2211 0 0101111    224677888999999999999999999998875

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=7.5e-47  Score=399.48  Aligned_cols=254  Identities=25%  Similarity=0.325  Sum_probs=206.0

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC---hhhHHHHH---HHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS---KQGIKEYA---SEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~---~~~~~~~~---~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      ++|...++||+|+||.||+|++..+|+.||||++....   ......+.   .|+++++.++||||+++++++.+.+.++
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            57889999999999999999999999999999986431   12223333   4467777788999999999999999999


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +|||||++|+|.+++.+. ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        84 ivmE~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~ylH~---~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~  159 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK  159 (364)
T ss_dssp             EEECCCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred             EEEEecCCCcHHHHHHhc-ccccHHHHHHHHHHHHHHHHHHHH---CCccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence            999999999999998654 568899999999999999999999   9999999999999999999999999999986643


Q ss_pred             cCCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCc
Q 042831          506 AKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDP  584 (645)
Q Consensus       506 ~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~  584 (645)
                      .   ......||+.|+|||++..+ .++.++|||||||+||||++|+.||......+...+.    ......      ..
T Consensus       160 ~---~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~----~~~~~~------~~  226 (364)
T d1omwa3         160 K---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID----RMTLTM------AV  226 (364)
T ss_dssp             S---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHH----HHSSSC------CC
T ss_pred             C---cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHH----HhcccC------CC
Confidence            2   23446799999999998754 5899999999999999999999999865443322111    111111      11


Q ss_pred             cccCCCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHhccC
Q 042831          585 RLCRDFDGQQIERLMIVGLWCAHPDENLRPS-----IRQVIHVLNFE  626 (645)
Q Consensus       585 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~~  626 (645)
                      .+...++    ..+.+++.+||+.||++|||     ++|+++|.|+.
T Consensus       227 ~~~~~~s----~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~  269 (364)
T d1omwa3         227 ELPDSFS----PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR  269 (364)
T ss_dssp             CCCSSSC----HHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGT
T ss_pred             CCCCCCC----HHHHHHHHHHcccCHHHhCCCcccCHHHHHcCcccc
Confidence            1111222    35678889999999999999     79999999875

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-47  Score=387.63  Aligned_cols=248  Identities=31%  Similarity=0.439  Sum_probs=196.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeee-CCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHE-KKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~-~~~~~lV~E  429 (645)
                      .++|+..+.||+|+||.||+|+++  |..||||+++...  ..++|.+|++++++++||||++++|+|.+ .+.+++|||
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~e   81 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   81 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEe
Confidence            346677889999999999999985  6789999996543  44689999999999999999999999865 466899999


Q ss_pred             ecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          430 FMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       430 y~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      |+++|+|.+++.+. ...++|..+++|+.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....  
T Consensus        82 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~--  156 (262)
T d1byga_          82 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--  156 (262)
T ss_dssp             CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred             ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhcccccc---CceeccccchHhheecCCCCEeecccccceecCCC--
Confidence            99999999999754 3468999999999999999999999   89999999999999999999999999999865432  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                        .....++..|+|||++.++.++.++|||||||++|||+| |+.||......   .+..++    .++..     +.+.
T Consensus       157 --~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~---~~~~~i----~~~~~-----~~~~  222 (262)
T d1byga_         157 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPRV----EKGYK-----MDAP  222 (262)
T ss_dssp             -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---GHHHHH----TTTCC-----CCCC
T ss_pred             --CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH---HHHHHH----HcCCC-----CCCC
Confidence              223467899999999999999999999999999999998 67877654322   223222    22221     1111


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .    .....+.+|+.+||+.||++||||+|++++|+.
T Consensus       223 ~----~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~  256 (262)
T d1byga_         223 D----GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH  256 (262)
T ss_dssp             T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             c----cCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            1    222467788899999999999999999999863

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-46  Score=391.01  Aligned_cols=259  Identities=19%  Similarity=0.251  Sum_probs=213.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEEe
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYEF  430 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~Ey  430 (645)
                      .++|...+.||+|+||+||+|++..+++.||||.++.... ....+.+|+++|++++||||+++++++.+++.+++||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            3578889999999999999999999999999999976543 345688999999999999999999999999999999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC--CCcEEEeeccCcccccccCC
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS--NFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~--~~~~kl~DfGla~~~~~~~~  508 (645)
                      |++|+|.+++...+..+++.++..++.||++||.|||+   .+|+||||||+|||++.  ...+||+|||+++.....  
T Consensus        83 ~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~---~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~--  157 (321)
T d1tkia_          83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG--  157 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT--
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---cCCCcccccccceeecCCCceEEEEcccchhhccccC--
Confidence            99999999997766689999999999999999999998   99999999999999984  458999999999865432  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                      .......+|+.|+|||.+.+..++.++|||||||++|||++|+.||......   .+..    .+.++...  ++.....
T Consensus       158 ~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~---~~~~----~i~~~~~~--~~~~~~~  228 (321)
T d1tkia_         158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ---QIIE----NIMNAEYT--FDEEAFK  228 (321)
T ss_dssp             CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHH----HHHHTCCC--CCHHHHT
T ss_pred             CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH---HHHH----HHHhCCCC--CChhhcc
Confidence            2344567899999999999999999999999999999999999999754321   1111    11111110  1111111


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCCC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEAP  628 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  628 (645)
                      ..    ...+.+++..||+.||++|||++|+++|.|+...
T Consensus       229 ~~----s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         229 EI----SIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             TS----CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             CC----CHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence            12    2356788899999999999999999999887543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-47  Score=387.49  Aligned_cols=255  Identities=27%  Similarity=0.388  Sum_probs=198.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCC---CeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRET---NSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELL  425 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~---~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~  425 (645)
                      ++|+..+.||+|+||.||+|++...   ...||||++...   ..+..++|.+|++++++++||||++++|+|.+ +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            5688889999999999999987532   247999988654   34456789999999999999999999999975 4678


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      +|||||++|+|.+++......+++..++.++.|||.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        87 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~  163 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  163 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             eeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhh---CCEeeeeecHHHhccccccceeeccchhhhhccc
Confidence            9999999999999888777789999999999999999999999   8999999999999999999999999999997654


Q ss_pred             cCCc--ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchhHHHHHHHHhcCCcccccc
Q 042831          506 AKGS--QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAV  582 (645)
Q Consensus       506 ~~~~--~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~  582 (645)
                      ....  ......|+..|+|||++.+..++.++|||||||++|||+| |+.||......   ....   .....+...   
T Consensus       164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~---~~~~---~i~~~~~~~---  234 (273)
T d1u46a_         164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS---QILH---KIDKEGERL---  234 (273)
T ss_dssp             -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH---HHHTSCCCC---
T ss_pred             CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHH---HHHH---HHHhCCCCC---
Confidence            3332  2233567889999999999999999999999999999998 89999754322   2222   222222111   


Q ss_pred             CccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          583 DPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       583 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                        ......    ...+.+++.+||+.||++||||+||++.|..
T Consensus       235 --~~~~~~----~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         235 --PRPEDC----PQDIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             --CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --CCcccc----cHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence              111122    2457788999999999999999999998863

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-46  Score=389.58  Aligned_cols=251  Identities=28%  Similarity=0.451  Sum_probs=203.8

Q ss_pred             CCccCcCCcEEEEEEEEcCCC---eEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee-CCeEEEEEEec
Q 042831          357 DQKLGQGGFGGVYKGFFRETN---SYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE-KKELLLVYEFM  431 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~---~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~-~~~~~lV~Ey~  431 (645)
                      .++||+|+||+||+|++..++   ..||||+++.. +....++|.+|++++++++||||++++|+|.+ ++..++|||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            467999999999999986543   46999999753 55567889999999999999999999999875 56899999999


Q ss_pred             CCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc--
Q 042831          432 PNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS--  509 (645)
Q Consensus       432 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~--  509 (645)
                      ++|+|.+++......+++..+.+++.|+++||.|||+   .+|+||||||+|||+++++.+||+|||+++........  
T Consensus       112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~---~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~  188 (311)
T d1r0pa_         112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV  188 (311)
T ss_dssp             TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCT
T ss_pred             ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcc---cCcccCCccHHhEeECCCCCEEEecccchhhccccccccc
Confidence            9999999998777788999999999999999999998   89999999999999999999999999999876543222  


Q ss_pred             -ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          510 -QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       510 -~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                       ......||+.|+|||.+.++.++.++||||||+++|||+||+.||.......  .+..++    .+|...  ..|.   
T Consensus       189 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~--~~~~~i----~~g~~~--~~p~---  257 (311)
T d1r0pa_         189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYL----LQGRRL--LQPE---  257 (311)
T ss_dssp             TCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--------CHHHH----HTTCCC--CCCT---
T ss_pred             eecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHH--HHHHHH----HcCCCC--CCcc---
Confidence             2233568999999999999999999999999999999999888876433221  122222    223211  1121   


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ..    .+.+.+|+.+||+.||++||||+||+++|+.
T Consensus       258 ~~----~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~  290 (311)
T d1r0pa_         258 YC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISA  290 (311)
T ss_dssp             TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cC----cHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            11    2457788899999999999999999999974

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-47  Score=392.70  Aligned_cols=253  Identities=29%  Similarity=0.417  Sum_probs=203.3

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCe--EEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeCCeEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNS--YIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~--~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ++|+..++||+|+||.||+|+++.+|.  .||||+++.. ..+..++|.+|+++|.++ +||||++++|+|.+++.+++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            577788999999999999999988776  4788887644 444567899999999998 799999999999999999999


Q ss_pred             EEecCCCChhhhhhhc---------------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcE
Q 042831          428 YEFMPNGSLDSHLFKE---------------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA  492 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~  492 (645)
                      |||+++|+|.++++..               ...+++.++.+++.|||.||.|||+   ++|+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~---~~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhc---CCccccccccceEEEcCCCce
Confidence            9999999999998643               3679999999999999999999999   899999999999999999999


Q ss_pred             EEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCC-CCCCCCCCCchhHHHHHHH
Q 042831          493 KIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRK-PINPKAPQGQVSLLQWVWD  571 (645)
Q Consensus       493 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~-pf~~~~~~~~~~l~~~~~~  571 (645)
                      ||+|||+++.......  .....||..|+|||.+.++.++.++|||||||++|||++|.. ||.....   ..+.    .
T Consensus       167 kl~DfG~a~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~---~~~~----~  237 (309)
T d1fvra_         167 KIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---AELY----E  237 (309)
T ss_dssp             EECCTTCEESSCEECC--C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHH----H
T ss_pred             EEcccccccccccccc--ccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCH---HHHH----H
Confidence            9999999986543222  233468999999999999999999999999999999999764 5654321   1122    2


Q ss_pred             HhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          572 LYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       572 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      ...++..     +..    +....+.+.+|+.+||+.||++||||+||+++|+.
T Consensus       238 ~i~~~~~-----~~~----~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~  282 (309)
T d1fvra_         238 KLPQGYR-----LEK----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  282 (309)
T ss_dssp             HGGGTCC-----CCC----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHhcCC-----CCC----CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            2222211     111    11223467788899999999999999999999864

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-47  Score=389.83  Aligned_cols=262  Identities=26%  Similarity=0.365  Sum_probs=200.6

Q ss_pred             HHHHhhcCCCCCCccCcCCcEEEEEEEEcC-----CCeEEEEEEeccC-ChhhHHHHHHHHHHHHhc-CCCCccEEEeee
Q 042831          346 ELALATNDFNDDQKLGQGGFGGVYKGFFRE-----TNSYIAVKRVSQG-SKQGIKEYASEVKIISRL-RHRNLVQLLGWC  418 (645)
Q Consensus       346 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~  418 (645)
                      +++...++|...++||+|+||.||+|++..     +++.||||+++.. .....+.+.+|...+.++ +|+||+.+++++
T Consensus         7 ~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~   86 (299)
T d1ywna1           7 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC   86 (299)
T ss_dssp             HHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeee
Confidence            333445678889999999999999999754     3478999998754 344567788899988887 689999999998


Q ss_pred             eeC-CeEEEEEEecCCCChhhhhhhc---------------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCC
Q 042831          419 HEK-KELLLVYEFMPNGSLDSHLFKE---------------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSS  482 (645)
Q Consensus       419 ~~~-~~~~lV~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~  482 (645)
                      ... +.+++|||||++|+|.+++...               ...+++.++..++.||++||.|||+   ++|+||||||+
T Consensus        87 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~ivHrDlKp~  163 (299)
T d1ywna1          87 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAAR  163 (299)
T ss_dssp             CSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGG
T ss_pred             ccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHh---CCCcCCcCCcc
Confidence            764 5689999999999999999643               2358999999999999999999999   89999999999


Q ss_pred             CeEECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCC-CCCCCCCCC
Q 042831          483 NIMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR-KPINPKAPQ  560 (645)
Q Consensus       483 NILld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~-~pf~~~~~~  560 (645)
                      |||+++++++||+|||+++........ ......||+.|+|||++.++.++.++|||||||++|||++|. .||......
T Consensus       164 NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~  243 (299)
T d1ywna1         164 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID  243 (299)
T ss_dssp             GEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS
T ss_pred             ceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH
Confidence            999999999999999999866543322 334467999999999999999999999999999999999864 577644332


Q ss_pred             CchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          561 GQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       561 ~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      .      .+.....++...     ......    ...+.+++.+||+.||++|||++|++++|+.
T Consensus       244 ~------~~~~~~~~~~~~-----~~~~~~----~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~  293 (299)
T d1ywna1         244 E------EFCRRLKEGTRM-----RAPDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  293 (299)
T ss_dssp             H------HHHHHHHHTCCC-----CCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             H------HHHHHHhcCCCC-----CCCccC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            1      122222222221     111112    2457788899999999999999999999963

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-47  Score=391.40  Aligned_cols=269  Identities=26%  Similarity=0.385  Sum_probs=215.6

Q ss_pred             CCccChHH-HHHhhcCCCCCCccCcCCcEEEEEEEEc-----CCCeEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCC
Q 042831          339 PKRFPYKE-LALATNDFNDDQKLGQGGFGGVYKGFFR-----ETNSYIAVKRVSQGS-KQGIKEYASEVKIISRL-RHRN  410 (645)
Q Consensus       339 ~~~~~~~e-l~~~~~~f~~~~~LG~G~fG~Vy~g~~~-----~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~n  410 (645)
                      |++++++. ++...++|+..++||+|+||.||+|++.     .+++.||||+++... .....+|.+|+.++.++ +|||
T Consensus         9 ~~~~~~~~~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~Hpn   88 (311)
T d1t46a_           9 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN   88 (311)
T ss_dssp             TTTSCCCGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTT
T ss_pred             cccCCCcccccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCC
Confidence            45555533 3345578888999999999999999873     456799999997653 44566899999999999 6999


Q ss_pred             ccEEEeeeeeCCeEEEEEEecCCCChhhhhhhcC-----------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCC
Q 042831          411 LVQLLGWCHEKKELLLVYEFMPNGSLDSHLFKEN-----------------SLLTWEFRYKIAQDLASGLLYLQEEWEQC  473 (645)
Q Consensus       411 lv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~  473 (645)
                      ||+++++|.+++..++|||||++|+|.+++....                 ..+++..+..++.||++||.|||+   ++
T Consensus        89 Iv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~---~~  165 (311)
T d1t46a_          89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KN  165 (311)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             EEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CC
Confidence            9999999999999999999999999999986532                 258999999999999999999999   89


Q ss_pred             eeeccCCCCCeEECCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CC
Q 042831          474 VVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GR  551 (645)
Q Consensus       474 ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~  551 (645)
                      ++||||||+|||++.++.+||+|||+++........ ......||+.|+|||++.++.++.++|||||||++|||+| |+
T Consensus       166 ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~  245 (311)
T d1t46a_         166 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS  245 (311)
T ss_dssp             CCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             eeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCC
Confidence            999999999999999999999999999876544332 3344678999999999999999999999999999999999 45


Q ss_pred             CCCCCCCCCCchhHHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          552 KPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       552 ~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                      +||......+.      ++....++.     .+.    .+......+.+|+.+||+.||++||||+|+++.|+.
T Consensus       246 p~~~~~~~~~~------~~~~i~~~~-----~~~----~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~  304 (311)
T d1t46a_         246 SPYPGMPVDSK------FYKMIKEGF-----RML----SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK  304 (311)
T ss_dssp             CSSTTCCSSHH------HHHHHHHTC-----CCC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCHHHH------HHHHHhcCC-----CCC----CcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            55544332211      112222221     111    111123567888999999999999999999999974

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-46  Score=395.65  Aligned_cols=250  Identities=24%  Similarity=0.332  Sum_probs=210.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~  428 (645)
                      ++|+..++||+|+||.||+|+++.+|+.||||++...   .....+.+.+|+++|++++||||+++++++.+.+..++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            5789999999999999999999999999999998643   2234567899999999999999999999999999999999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKG  508 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~  508 (645)
                      ||+.+|+|..++.+. ..+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....  
T Consensus       121 e~~~~g~l~~~l~~~-~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~--  194 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--  194 (350)
T ss_dssp             ECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred             ccccccchhhhHhhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCcCCHHHcccCCCCCEEeeeceeeeecccc--
Confidence            999999999998654 468999999999999999999998   89999999999999999999999999999876432  


Q ss_pred             cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCccccC
Q 042831          509 SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLCR  588 (645)
Q Consensus       509 ~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~~  588 (645)
                        .....||+.|||||++.+..++.++|||||||++|||++|+.||.....   ..+...    ...+..      ....
T Consensus       195 --~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~---~~~~~~----i~~~~~------~~p~  259 (350)
T d1rdqe_         195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEK----IVSGKV------RFPS  259 (350)
T ss_dssp             --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHH----HHHCCC------CCCT
T ss_pred             --cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCH---HHHHHH----HhcCCC------CCCc
Confidence              2346799999999999999999999999999999999999999975432   122221    112211      1111


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCC-----CCHHHHHHHhccC
Q 042831          589 DFDGQQIERLMIVGLWCAHPDENLR-----PSIRQVIHVLNFE  626 (645)
Q Consensus       589 ~~~~~~~~~l~~l~~~Cl~~dP~~R-----Ps~~evl~~L~~~  626 (645)
                      ..+    ..+.+++.+||+.||.+|     ||++|+++|.|+.
T Consensus       260 ~~s----~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~  298 (350)
T d1rdqe_         260 HFS----SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA  298 (350)
T ss_dssp             TCC----HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGT
T ss_pred             cCC----HHHHHHHHHHhhhCHHhccccccccHHHHHcCcccc
Confidence            222    356788899999999999     4999999999874

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.6e-46  Score=378.85  Aligned_cols=257  Identities=22%  Similarity=0.303  Sum_probs=202.0

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC----e
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK----E  423 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~----~  423 (645)
                      .++|...+.||+|+||.||+|++..+|+.||||+++..   ..+..+.+.+|++++++++||||+++++++...+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            46788999999999999999999999999999999754   2344567999999999999999999999987643    4


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      .++||||+++++|.+++... ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++..+|+|||.++..
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~-~~l~~~~~~~i~~qi~~al~~lH~---~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~  161 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAI  161 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTSCEEECCCTTCEEC
T ss_pred             EEEEEECCCCCEehhhhccc-CCCCHHHHHHHHHHHHHHHHHHHh---CCccCccccCcccccCccccceeehhhhhhhh
Confidence            79999999999999888554 468999999999999999999998   99999999999999999999999999998765


Q ss_pred             cccCC--cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc
Q 042831          504 EHAKG--SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA  581 (645)
Q Consensus       504 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~  581 (645)
                      .....  .......||+.|+|||++.+..++.++|||||||++|||+||+.||......      +........+.... 
T Consensus       162 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------~~~~~~~~~~~~~~-  234 (277)
T d1o6ya_         162 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV------SVAYQHVREDPIPP-  234 (277)
T ss_dssp             C----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHCCCCCG-
T ss_pred             ccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHH------HHHHHHHhcCCCCC-
Confidence            43322  2334567999999999999999999999999999999999999999754321      22222222222211 


Q ss_pred             cCccccCCCCHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHhc
Q 042831          582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRP-SIRQVIHVLN  624 (645)
Q Consensus       582 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~  624 (645)
                        .......+    +.+.+++.+||++||++|| |++++++.|.
T Consensus       235 --~~~~~~~s----~~l~~li~~~L~~dp~~R~~sa~~l~~~l~  272 (277)
T d1o6ya_         235 --SARHEGLS----ADLDAVVLKALAKNPENRYQTAAEMRADLV  272 (277)
T ss_dssp             --GGTSSSCC----HHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             --chhccCCC----HHHHHHHHHHccCCHhHCHhHHHHHHHHHH
Confidence              11111222    4567788999999999999 8999988764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-47  Score=391.91  Aligned_cols=253  Identities=24%  Similarity=0.383  Sum_probs=209.2

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC---ChhhHHHHHHHHHHHH-hcCCCCccEEEeeeeeCCeEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG---SKQGIKEYASEVKIIS-RLRHRNLVQLLGWCHEKKELLLV  427 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~-~l~H~nlv~l~~~~~~~~~~~lV  427 (645)
                      ++|...+.||+|+||+||+|++..+|+.||||+++..   .....+.+..|..++. .++||||+++++++.+++..++|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            5788899999999999999999999999999999653   2334556777777765 68999999999999999999999


Q ss_pred             EEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccC
Q 042831          428 YEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       428 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~  507 (645)
                      ||||++|+|.+++... ..+++.++..++.||+.||.|||+   ++|+||||||+|||+++++++||+|||+++......
T Consensus        82 mEy~~~g~L~~~i~~~-~~~~e~~~~~~~~qi~~al~ylH~---~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~  157 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD  157 (320)
T ss_dssp             EECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             EeecCCCcHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCcccceeecCCCceeccccchhhhccccc
Confidence            9999999999998644 468999999999999999999999   899999999999999999999999999998654332


Q ss_pred             CcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccccCcccc
Q 042831          508 GSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEAVDPRLC  587 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~~d~~l~  587 (645)
                       .......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .    ++.....+.      +.+.
T Consensus       158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~---~----~~~~i~~~~------~~~p  223 (320)
T d1xjda_         158 -AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE---E----LFHSIRMDN------PFYP  223 (320)
T ss_dssp             -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---H----HHHHHHHCC------CCCC
T ss_pred             -ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH---H----HHHHHHcCC------CCCC
Confidence             3344567999999999999999999999999999999999999999754321   1    222222221      1111


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHhccC
Q 042831          588 RDFDGQQIERLMIVGLWCAHPDENLRPSIR-QVIHVLNFE  626 (645)
Q Consensus       588 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~~L~~~  626 (645)
                      ...+    ..+.+|+.+||+.||++|||++ |+++|.++.
T Consensus       224 ~~~s----~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~  259 (320)
T d1xjda_         224 RWLE----KEAKDLLVKLFVREPEKRLGVRGDIRQHPLFR  259 (320)
T ss_dssp             TTSC----HHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGT
T ss_pred             ccCC----HHHHHHHHHhcccCCCCCcCHHHHHHhCchhc
Confidence            2222    3567888999999999999996 899887764

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-46  Score=386.27  Aligned_cols=256  Identities=26%  Similarity=0.411  Sum_probs=206.5

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCC-------eEEEEEEeccCC-hhhHHHHHHHHHHHHhc-CCCCccEEEeeeeeC
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETN-------SYIAVKRVSQGS-KQGIKEYASEVKIISRL-RHRNLVQLLGWCHEK  421 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~-------~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~~  421 (645)
                      .++|...+.||+|+||.||+|+...++       ..||||+++.+. .....++.+|...+.++ +||||++++++|.++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            457778899999999999999976543       479999997654 35568899999999988 799999999999999


Q ss_pred             CeEEEEEEecCCCChhhhhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEE
Q 042831          422 KELLLVYEFMPNGSLDSHLFKEN---------------SLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIML  486 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILl  486 (645)
                      +..++|||||++|+|.+++....               ..+++.+++.++.||+.||.|||+   ++|+||||||+|||+
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~---~~ivHrDiKp~NiLl  168 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLV  168 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred             CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhh---CCEEeeeecccceee
Confidence            99999999999999999996442               458999999999999999999999   999999999999999


Q ss_pred             CCCCcEEEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCCCCchh
Q 042831          487 DSNFNAKIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIAC-GRKPINPKAPQGQVS  564 (645)
Q Consensus       487 d~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~ellt-G~~pf~~~~~~~~~~  564 (645)
                      +.++.+||+|||+++........ ......+++.|+|||.+.++.++.++|||||||++|||++ |+.||.....     
T Consensus       169 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~-----  243 (299)
T d1fgka_         169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-----  243 (299)
T ss_dssp             CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred             cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH-----
Confidence            99999999999999877544332 3344678999999999999999999999999999999998 7888864332     


Q ss_pred             HHHHHHHHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhcc
Q 042831          565 LLQWVWDLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNF  625 (645)
Q Consensus       565 l~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  625 (645)
                        +.++..+.++...     ......    ...+.+|+.+||+.||++|||+.||++.|+.
T Consensus       244 --~~~~~~i~~~~~~-----~~p~~~----~~~l~~li~~cl~~dP~~Rps~~eil~~L~~  293 (299)
T d1fgka_         244 --EELFKLLKEGHRM-----DKPSNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  293 (299)
T ss_dssp             --HHHHHHHHTTCCC-----CCCSSC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --HHHHHHHHcCCCC-----CCCccc----hHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence              1223333333221     111122    2467889999999999999999999999964

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-46  Score=381.19  Aligned_cols=268  Identities=24%  Similarity=0.305  Sum_probs=206.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ++|+..++||+|+||+||+|++..+|+.||||+++...  ....+++.+|++++++++||||+++++++.++++.++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            57888999999999999999999999999999996542  2345788999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+.++.+..........+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++...... .
T Consensus        82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~---~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~-~  157 (298)
T d1gz8a_          82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-R  157 (298)
T ss_dssp             CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS-B
T ss_pred             ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhc---CCEEccccCchheeecccCcceeccCCcceeccCCc-c
Confidence            997654444434456679999999999999999999998   999999999999999999999999999998664322 2


Q ss_pred             ceeecccCccccCccccccCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCc--ccccc----
Q 042831          510 QTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGK--LLEAV----  582 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~-~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~--l~~~~----  582 (645)
                      ......||+.|+|||.+.... .+.++|||||||++|||++|+.||......   ..............  ....+    
T Consensus       158 ~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~  234 (298)
T d1gz8a_         158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---DQLFRIFRTLGTPDEVVWPGVTSMP  234 (298)
T ss_dssp             CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             cceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHH---HHHHHHHHhcCCCchhhcccccccc
Confidence            334457999999999877655 588999999999999999999999754321   11211111111100  00000    


Q ss_pred             --Ccccc--CCCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          583 --DPRLC--RDFDG-----QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       583 --d~~l~--~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                        .+...  ...+.     .....+.+++.+||+.||++|||++|+++|.++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~  287 (298)
T d1gz8a_         235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ  287 (298)
T ss_dssp             TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGT
T ss_pred             ccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhc
Confidence              00000  00000     1124667788999999999999999999998875

>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]

Probab=100.00  E-value=3.9e-46  Score=367.83  Aligned_cols=216  Identities=28%  Similarity=0.440  Sum_probs=186.2

Q ss_pred             CceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CC------CceEEEEeCCceecccCCCCCccceeEEEEEEEe
Q 042831           32 ASALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NR------ETAGRATYNQSMRLWDKATGNLTDFTTHFSFVID  103 (645)
Q Consensus        32 ~~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~------~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~  103 (645)
                      |..++|+|++|+++  +++.|+ ||.+.++|.|+||+ ..      .++|||+|++||+||+  +++++||+|+|+|.|.
T Consensus         1 a~~~sF~f~~F~~~--~~l~l~GdA~i~~~g~l~LT~~~~~~~~~~~s~G~a~y~~Pv~l~~--~~~~~sFst~F~f~i~   76 (228)
T d1ioaa_           1 ATETSFNFPNFHTD--DKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKD--SNNVASFNTNFTFIIR   76 (228)
T ss_dssp             CCCCEEEESSCCTT--SSEEEEETCEECTTSCEETTCBCTTSSBCSSCBEEEEESSCEECBC--SSCBEEEEEEEEEECC
T ss_pred             CccceEEcCCCCCC--CcEEEeeeeEEcCCCEEEecCCCCCCccccceeEEEEECCceEecC--CCceeeEEEEEEEEEe
Confidence            35688999999864  469999 99987889999998 32      3689999999999998  4789999999999999


Q ss_pred             eCCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCcccceeee
Q 042831          104 SRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSW  183 (645)
Q Consensus       104 ~~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~s~~~~~~  183 (645)
                      +.+...+||||||+|+|.+.  +.+..|++||+++... ++..++.|||||||++|.+|++.+||++++++..       
T Consensus        77 ~~~~~~~gDGlAF~l~~~~~--~~~~~g~~lgl~~~~~-~~~~~~~vave~dt~~n~~~~~~~~~~~~~~~~~-------  146 (228)
T d1ioaa_          77 AKNQSISAYGLAFALVPVNS--PPQKKQEFLGIFNTNN-PEPNARTVAVVFNTFKNRIDFDKNFIKPYVNENC-------  146 (228)
T ss_dssp             BSCTTSCCEEEEEEEEETTC--CCCCCGGGTTTCCCSS-CCGGGCCEEEEEETTTTEEEEEESSSSCSEEEEC-------
T ss_pred             cCCCCCCCCEEEEEEeCCCC--CCCCCccccccccccC-CCCcceeEEEEecCccccccCCCCccceeccccc-------
Confidence            98777889999999999875  4567889999998643 4567889999999999888888888888887532       


Q ss_pred             cccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeeccc---ceeeeEEEEEeecc
Q 042831          184 WSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATG---VDFAIFSIYSWEFN  260 (645)
Q Consensus       184 ~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg---~~~~~~~i~~wsf~  260 (645)
                      ..++.+|+.++|||+||+.+++|+|+|.+..  +|..|++++.+||+++|+++|||||||+||   ...|.|+|++|+|+
T Consensus       147 ~~~~~~g~~~~v~I~Yd~~~~~l~V~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~~h~I~sWsFs  224 (228)
T d1ioaa_         147 DFHKYNGEKTDVQITYDSSNNDLRVFLHFTV--SQVKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDVLSWSFS  224 (228)
T ss_dssp             CHHHHCSSCEEEEEEEETTTTEEEEEEEETT--TCCEEEEEEECCGGGTSCSEEEEEEEEEECSSTTTCBCCEEEEEEEE
T ss_pred             ccccccCcEEEEEEEEcCCCCEEEEEEEeCC--CCceeeEEEEEchHHcCCCcEEEEEEeecCCCCCCceEEEEEEEEeE
Confidence            3356799999999999999999999998754  577889999999999999999999999999   55689999999999


Q ss_pred             Ccc
Q 042831          261 SSL  263 (645)
Q Consensus       261 ~~~  263 (645)
                      +.+
T Consensus       225 s~~  227 (228)
T d1ioaa_         225 SKF  227 (228)
T ss_dssp             EEE
T ss_pred             Eec
Confidence            865

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-46  Score=388.89  Aligned_cols=260  Identities=28%  Similarity=0.437  Sum_probs=211.5

Q ss_pred             HHhhcCCCCCCccCcCCcEEEEEEEEcC-----CCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC
Q 042831          348 ALATNDFNDDQKLGQGGFGGVYKGFFRE-----TNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK  421 (645)
Q Consensus       348 ~~~~~~f~~~~~LG~G~fG~Vy~g~~~~-----~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~  421 (645)
                      +...++|...++||+|+||.||+|.+..     +++.||||+++.. ..+....|.+|++++++++||||++++++|..+
T Consensus        16 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~   95 (308)
T d1p4oa_          16 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG   95 (308)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             eecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecC
Confidence            3344677888999999999999998853     3578999999754 445566799999999999999999999999999


Q ss_pred             CeEEEEEEecCCCChhhhhhhc---------CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcE
Q 042831          422 KELLLVYEFMPNGSLDSHLFKE---------NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNA  492 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~  492 (645)
                      +..++|||||++|+|.+++...         ...+++..+.+++.|+|+||.|||+   ++|+||||||+|||+|+++++
T Consensus        96 ~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~---~~ivHrDlk~~NiLld~~~~~  172 (308)
T d1p4oa_          96 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTV  172 (308)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCE
T ss_pred             CceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeeceEcCCceeecCCceE
Confidence            9999999999999999988642         1357999999999999999999999   899999999999999999999


Q ss_pred             EEeeccCcccccccCCc-ceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCC-CCCCCCCCCCchhHHHHHH
Q 042831          493 KIGDFGLARLVEHAKGS-QTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGR-KPINPKAPQGQVSLLQWVW  570 (645)
Q Consensus       493 kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~-~pf~~~~~~~~~~l~~~~~  570 (645)
                      ||+|||+++........ ......||+.|+|||.+.++.++.++|||||||++|||++|+ .||......      + +.
T Consensus       173 Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~------~-~~  245 (308)
T d1p4oa_         173 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------Q-VL  245 (308)
T ss_dssp             EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH------H-HH
T ss_pred             EEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHH------H-HH
Confidence            99999999876543332 233346899999999999999999999999999999999985 666543221      1 12


Q ss_pred             HHhcCCccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          571 DLYGNGKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       571 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ....++...+.     ...+    ...+.+++.+||+.||++||||+||+++|+..
T Consensus       246 ~~i~~~~~~~~-----p~~~----~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~  292 (308)
T d1p4oa_         246 RFVMEGGLLDK-----PDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  292 (308)
T ss_dssp             HHHHTTCCCCC-----CTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             HHHHhCCCCCC-----cccc----hHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            22223332211     1112    24678889999999999999999999999875

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-46  Score=389.27  Aligned_cols=256  Identities=22%  Similarity=0.279  Sum_probs=202.8

Q ss_pred             cCCCCCC-ccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhc-CCCCccEEEeeeee----CCeEE
Q 042831          352 NDFNDDQ-KLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRL-RHRNLVQLLGWCHE----KKELL  425 (645)
Q Consensus       352 ~~f~~~~-~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nlv~l~~~~~~----~~~~~  425 (645)
                      ++|.+.+ .||+|+||.||+|++..+++.||||+++..     ..+.+|++++.++ +||||+++++++.+    +..++
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            5777664 599999999999999999999999998643     4567899987665 89999999999865    46789


Q ss_pred             EEEEecCCCChhhhhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC---CCcEEEeeccCcc
Q 042831          426 LVYEFMPNGSLDSHLFKE-NSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS---NFNAKIGDFGLAR  501 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~---~~~~kl~DfGla~  501 (645)
                      +|||||++|+|.+++.+. ...+++.+++.|+.||+.||.|||+   ++|+||||||+|||++.   ++.+||+|||+++
T Consensus        86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~---~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~  162 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK  162 (335)
T ss_dssp             EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHH---cCCccccccccccccccccccccccccccceee
Confidence            999999999999999764 3579999999999999999999998   99999999999999985   5679999999998


Q ss_pred             cccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA  581 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~  581 (645)
                      ......  ......||+.|+|||++.+..++.++|||||||+||||+||+.||.........   .........+..   
T Consensus       163 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~---~~~~~~i~~~~~---  234 (335)
T d2ozaa1         163 ETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS---PGMKTRIRMGQY---  234 (335)
T ss_dssp             ECCCCC--CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-----------CCCSCSS---
T ss_pred             eccCCC--ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHH---HHHHHHHhcCCC---
Confidence            765432  334467999999999999999999999999999999999999999755432211   111111111110   


Q ss_pred             cCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       582 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                         .+.........+.+.+|+.+||+.||++|||++|+++|.|+.
T Consensus       235 ---~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~  276 (335)
T d2ozaa1         235 ---EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  276 (335)
T ss_dssp             ---SCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHH
T ss_pred             ---CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhh
Confidence               000000112235678889999999999999999999997763

>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=100.00  E-value=4e-46  Score=367.48  Aligned_cols=216  Identities=26%  Similarity=0.437  Sum_probs=193.1

Q ss_pred             CceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC----CCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCC
Q 042831           32 ASALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA----NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRN  106 (645)
Q Consensus        32 ~~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~----~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~  106 (645)
                      +.+++|+|++|.+.   |+.++ ||.+.++|.|+||+    ...++|||+|++||+|||+.+++++||+|+|+|.|.+..
T Consensus         1 ~~~~sf~f~~F~~~---nl~l~GdA~v~~~g~i~LT~~~~~~~~~~G~~~y~~Pv~l~~~~~~~~~sF~t~f~f~i~~~~   77 (226)
T d1avba_           1 SNDASFNVETFNKT---NLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTIDNLASFSTNFTFRINAKN   77 (226)
T ss_dssp             CEEEEEEESSCCGG---GEEEEETCEECTTSCEECSCSSSCCTTCEEEEEESSCEECEEGGGTEEEEEEEEEEEEEEESS
T ss_pred             CCceEEECCCCCcc---ceeEecceEECCCCeEEccCCCCCCccceEEEEeCCCeEcccCCCCcccceEEEEEEEEecCC
Confidence            35789999999754   79999 99987889999997    234799999999999999999999999999999999988


Q ss_pred             CCCCCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCC--CCCCCCceeeecCCCcccceeeec
Q 042831          107 SSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNS--WDPTFSHVGIDINSVKSKKNVSWW  184 (645)
Q Consensus       107 ~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~--~d~~~~hvgidvns~~s~~~~~~~  184 (645)
                      ...+||||||+|+|.+..  .+..||++|+++.          ++|||||+.|.  +|+.+||||||+|+..|..+....
T Consensus        78 ~~~~gDG~aF~i~~~~~~--~g~~gg~~gl~~~----------~~v~fdt~~~~~~~d~~~nhi~i~~n~~~s~~~~~~~  145 (226)
T d1avba_          78 IENSAYGLAFALVPVGSR--PKLKGRYLGLFNT----------TNYDRDAHTVAVVFDTVSNRIEIDVNSIRPIATESCN  145 (226)
T ss_dssp             TTSCCEEEEEEEEETTCC--CCCCGGGTTTCSC----------SSCCGGGCCEEEEEETTTTEEEEEESSSSCSEEEECC
T ss_pred             CCCCCceEEEEEccCCCC--CCCccccCCcccc----------ccccccceeccccccCCCCEEEEeCCCCccccccccc
Confidence            788999999999998753  4567889999864          57999999886  899999999999999999888877


Q ss_pred             ccCCCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccc---eeeeEEEEEeeccC
Q 042831          185 SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGV---DFAIFSIYSWEFNS  261 (645)
Q Consensus       185 ~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~---~~~~~~i~~wsf~~  261 (645)
                      .++.+|+.++|||+||+.+++|+|+|.+.+  ++..+.+++.+||+.+|+++||+||||+||.   ..|.|+|++|+|++
T Consensus       146 ~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~~~~~vdL~~~l~~~~y~GFSAaTG~~s~~~~~H~IlsWsF~s  223 (226)
T d1avba_         146 FGHNNGEKAEVRITYDSPKNDLRVSLLYPS--SEEKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWSFSS  223 (226)
T ss_dssp             SGGGTTCEEEEEEEEEGGGTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECSSGGGCEEEEEEEEEEEE
T ss_pred             cccCCCeEEEEEEEEcCCCcEEEEEEEeCC--CCccEEEEEEecHHHccCCcEEEEEEEEcCCCCCCeeeeEEEEEEeEE
Confidence            788999999999999999999999998765  4677889999999999999999999999994   56889999999998


Q ss_pred             ccc
Q 042831          262 SLE  264 (645)
Q Consensus       262 ~~~  264 (645)
                      +++
T Consensus       224 ~~~  226 (226)
T d1avba_         224 NFI  226 (226)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            763

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-45  Score=380.59  Aligned_cols=262  Identities=26%  Similarity=0.336  Sum_probs=199.4

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHH--HHHHHHHhcCCCCccEEEeeeeeCC----eEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYA--SEVKIISRLRHRNLVQLLGWCHEKK----ELL  425 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~--~Ei~~l~~l~H~nlv~l~~~~~~~~----~~~  425 (645)
                      .+|...++||+|+||.||+|++.  |+.||||+++....   +++.  .|+..+.+++||||++++++|.+.+    .++
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~--g~~vAvK~~~~~~~---~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~   77 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEEECGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccch---hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEE
Confidence            35666788999999999999974  78999999864432   3333  4555556789999999999997653    689


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhh-----cCCCeeeccCCCCCeEECCCCcEEEeeccCc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEE-----WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLA  500 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivH~Dlkp~NILld~~~~~kl~DfGla  500 (645)
                      +|||||++|+|.+++.+.  .++|..+++++.|+|.||+|||+.     +.++|+||||||+|||++.++.+||+|||++
T Consensus        78 lv~Ey~~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~  155 (303)
T d1vjya_          78 LVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEecccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcc
Confidence            999999999999999653  589999999999999999999973     2479999999999999999999999999999


Q ss_pred             ccccccCCc---ceeecccCccccCccccccCC------CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCc--------h
Q 042831          501 RLVEHAKGS---QTTVLAGTMGYMAPECATTGK------ASKESDVYSFGIVALEIACGRKPINPKAPQGQ--------V  563 (645)
Q Consensus       501 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~t~~sDV~SfGvll~elltG~~pf~~~~~~~~--------~  563 (645)
                      +........   ......||+.|+|||++....      ++.++|||||||+||||+||+.|+........        .
T Consensus       156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~  235 (303)
T d1vjya_         156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  235 (303)
T ss_dssp             EEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             ccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhccccc
Confidence            876543322   234467999999999987642      57799999999999999999988754332111        0


Q ss_pred             hHHHHHHHHhcCCccccccCccccCCC-CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          564 SLLQWVWDLYGNGKLLEAVDPRLCRDF-DGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       564 ~l~~~~~~~~~~~~l~~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ............+..    +|.+.... +.+....+.+|+.+||+.||++||||.||++.|+
T Consensus       236 ~~~~~~~~~~~~~~~----~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~  293 (303)
T d1vjya_         236 PSVEEMRKVVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS  293 (303)
T ss_dssp             CCHHHHHHHHTTSCC----CCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred             chHHHHHHHHhcccc----CCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence            111222222222222    22221111 2345667889999999999999999999999986

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-45  Score=379.54  Aligned_cols=268  Identities=23%  Similarity=0.275  Sum_probs=204.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCC-CeEEEEEEeccCC--hhhHHHHHHHHHHHHhc---CCCCccEEEeeeee----
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRET-NSYIAVKRVSQGS--KQGIKEYASEVKIISRL---RHRNLVQLLGWCHE----  420 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~-~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l---~H~nlv~l~~~~~~----  420 (645)
                      .++|+..++||+|+||+||+|++..+ ++.||||+++...  ......+.+|+.+++.+   +||||++++++|..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46899999999999999999999654 6789999986432  22233556777776665   79999999999853    


Q ss_pred             -CCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccC
Q 042831          421 -KKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGL  499 (645)
Q Consensus       421 -~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGl  499 (645)
                       ....+++|||++++++..........+++..++.++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~---~~ivHrDiKp~NILi~~~~~~kl~dfg~  162 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGL  162 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecCCCccEEEEcCCCCeeecchhh
Confidence             357899999999888766665667789999999999999999999999   9999999999999999999999999999


Q ss_pred             cccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccc
Q 042831          500 ARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLL  579 (645)
Q Consensus       500 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~  579 (645)
                      ++.....  .......||+.|+|||++.+..++.++||||+||++|||++|+.||......   .....+........-.
T Consensus       163 ~~~~~~~--~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~---~~~~~i~~~~~~~~~~  237 (305)
T d1blxa_         163 ARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV---DQLGKILDVIGLPGEE  237 (305)
T ss_dssp             CCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCGG
T ss_pred             hhhhccc--ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHH---HHHHHHHHhhCCCchh
Confidence            9865432  2334567999999999999999999999999999999999999999754422   2222222221110000


Q ss_pred             cc----------cC---ccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          580 EA----------VD---PRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       580 ~~----------~d---~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                      ..          ..   +.....+.....+.+.+|+.+||+.||++|||++|+++|.++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~  297 (305)
T d1blxa_         238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ  297 (305)
T ss_dssp             GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGT
T ss_pred             cccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhc
Confidence            00          00   0000001111224566788999999999999999999999875

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-46  Score=378.12  Aligned_cols=246  Identities=22%  Similarity=0.386  Sum_probs=201.5

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCCh------hhHHHHHHHHHHHHhcC--CCCccEEEeeeeeCCe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSK------QGIKEYASEVKIISRLR--HRNLVQLLGWCHEKKE  423 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~------~~~~~~~~Ei~~l~~l~--H~nlv~l~~~~~~~~~  423 (645)
                      ++|...++||+|+||.||+|++..+|+.||||++.....      ....++.+|+.++++++  ||||+++++++.+.+.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            578889999999999999999999999999999864321      12234678999999997  8999999999999999


Q ss_pred             EEEEEEecCC-CChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC-CCcEEEeeccCcc
Q 042831          424 LLLVYEFMPN-GSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-NFNAKIGDFGLAR  501 (645)
Q Consensus       424 ~~lV~Ey~~~-gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~-~~~~kl~DfGla~  501 (645)
                      .++||||+.+ +++.+++.. +..+++..++.++.||++||.|||+   ++|+||||||+|||++. ++.+||+|||+++
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~-~~~l~e~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~  159 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGA  159 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             EEEEEEeccCcchHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccccCcccceEEecCCCeEEECccccce
Confidence            9999999976 566666644 4579999999999999999999999   99999999999999985 5799999999998


Q ss_pred             cccccCCcceeecccCccccCccccccCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc
Q 042831          502 LVEHAKGSQTTVLAGTMGYMAPECATTGKA-SKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE  580 (645)
Q Consensus       502 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~  580 (645)
                      .....   ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||....     ...        .+..  
T Consensus       160 ~~~~~---~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-----~i~--------~~~~--  221 (273)
T d1xwsa_         160 LLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EII--------RGQV--  221 (273)
T ss_dssp             ECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HHH--------HCCC--
T ss_pred             ecccc---cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch-----HHh--------hccc--
Confidence            65432   2345679999999999987765 677999999999999999999996421     111        1111  


Q ss_pred             ccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          581 AVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       581 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                          .+...++    ..+.+++.+||+.||++|||++|+++|.|+..
T Consensus       222 ----~~~~~~s----~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~  260 (273)
T d1xwsa_         222 ----FFRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD  260 (273)
T ss_dssp             ----CCSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred             ----CCCCCCC----HHHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence                1112222    35677889999999999999999999998763

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.9e-45  Score=373.61  Aligned_cols=266  Identities=24%  Similarity=0.305  Sum_probs=204.4

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC--hhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS--KQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ++|...++||+|+||+||+|+++ +|+.||||+++...  ....+.+.+|+.+|++++||||+++++++..++..++++|
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e   80 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEE
Confidence            57888999999999999999986 57999999996543  3336789999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      |+.++.+..+. .....+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++....... .
T Consensus        81 ~~~~~~~~~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~-~  155 (286)
T d1ob3a_          81 HLDQDLKKLLD-VCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-R  155 (286)
T ss_dssp             CCSEEHHHHHH-TSTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred             eehhhhHHHHH-hhcCCcchhhhHHHHHHHHHHHHHhcc---CcEEecCCCCceeeEcCCCCEEecccccceecccCc-c
Confidence            99776665554 556779999999999999999999998   899999999999999999999999999998764332 2


Q ss_pred             ceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc-------
Q 042831          510 QTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA-------  581 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~-------  581 (645)
                      ......+++.|+|||.+... .++.++|||||||++|||++|+.||......   .....+............       
T Consensus       156 ~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~  232 (286)
T d1ob3a_         156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA---DQLMRIFRILGTPNSKNWPNVTELP  232 (286)
T ss_dssp             ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHH---HHHHHHHHhhCCCChhhccchhhhh
Confidence            23345689999999998754 5799999999999999999999999754322   222222222111100000       


Q ss_pred             -cCccc-------cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          582 -VDPRL-------CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       582 -~d~~l-------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                       .+...       ...........+.+++.+||+.||++|||++|+++|.+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~  285 (286)
T d1ob3a_         233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK  285 (286)
T ss_dssp             TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGG
T ss_pred             hcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence             00000       0001111224677889999999999999999999998874

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-44  Score=373.92  Aligned_cols=269  Identities=23%  Similarity=0.282  Sum_probs=203.7

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee--------C
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE--------K  421 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~--------~  421 (645)
                      ++|+..++||+|+||+||+|++..+|+.||||++...  .....+++.+|+++|++++|||++++++++..        +
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            6788899999999999999999999999999998644  33445778999999999999999999998854        3


Q ss_pred             CeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          422 KELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       422 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                      +..++||||+.++.+.... .....+++..++.++.||++||.|||+   ++|+||||||+|||++.++.+||+|||+++
T Consensus        90 ~~~~iv~e~~~~~~~~~~~-~~~~~~~~~~~~~i~~qil~~l~~lH~---~~ivHrDlKp~NILl~~~~~~kl~dfg~~~  165 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLAR  165 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHT-CTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             ceEEEEEeccCCCccchhh-hcccccccHHHHHHHHHHHHHHHHhcc---CCEEecCcCchheeecCCCcEEeeecceee
Confidence            4689999999877665443 455678999999999999999999998   999999999999999999999999999997


Q ss_pred             cccccCC---cceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC--
Q 042831          502 LVEHAKG---SQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN--  575 (645)
Q Consensus       502 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~--  575 (645)
                      .......   .......||+.|+|||++.+. .++.++|||||||++|||++|+.||......   ............  
T Consensus       166 ~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~---~~~~~i~~~~~~~~  242 (318)
T d3blha1         166 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ---HQLALISQLCGSIT  242 (318)
T ss_dssp             ECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCC
T ss_pred             ecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHH---HHHHHHHHhcCCCC
Confidence            6653221   122335799999999998765 6899999999999999999999999754322   222222222111  


Q ss_pred             CccccccC---------ccccCCCCHH-------HHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          576 GKLLEAVD---------PRLCRDFDGQ-------QIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       576 ~~l~~~~d---------~~l~~~~~~~-------~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      .......+         ..........       ....+++|+.+||++||++|||++|+++|.++..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~  310 (318)
T d3blha1         243 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS  310 (318)
T ss_dssp             TTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSS
T ss_pred             hhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhcc
Confidence            00000000         0000011111       1234567899999999999999999999999874

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-43  Score=372.47  Aligned_cols=262  Identities=22%  Similarity=0.291  Sum_probs=198.7

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC------CeEEE
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK------KELLL  426 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~------~~~~l  426 (645)
                      +|+..++||+|+||+||+|++..+|+.||||++......    ..+|+++|++++||||++++++|...      .+++|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS----CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH----HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            577788999999999999999999999999999765322    23699999999999999999998542      35799


Q ss_pred             EEEecCCCChhhhhh--hcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC-cEEEeeccCcccc
Q 042831          427 VYEFMPNGSLDSHLF--KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF-NAKIGDFGLARLV  503 (645)
Q Consensus       427 V~Ey~~~gsL~~~l~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~-~~kl~DfGla~~~  503 (645)
                      |||||+++.+.....  .....+++..++.++.||+.||.|||+   ++|+||||||+|||++.++ .+||+|||+++..
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCcceEEEecCCCceeEecccchhhc
Confidence            999998765444332  345679999999999999999999998   9999999999999999775 8999999999876


Q ss_pred             cccCCcceeecccCccccCcccccc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhc--------
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATT-GKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYG--------  574 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~--------  574 (645)
                      ....  ......|+..|+|||.+.+ ..++.++||||+||++|||++|+.||......+.   ...+....+        
T Consensus       174 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~---l~~i~~~~g~~~~~~~~  248 (350)
T d1q5ka_         174 VRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVLGTPTREQIR  248 (350)
T ss_dssp             CTTS--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH---HHHHHHHHCCCCHHHHH
T ss_pred             cCCc--ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHH---HHHHHHHhCCChHHhhh
Confidence            5433  2334579999999998765 5689999999999999999999999975442211   111111110        


Q ss_pred             ---CC----ccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          575 ---NG----KLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       575 ---~~----~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                         ..    .....................+.+|+.+||+.||++|||++|+++|.+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~  307 (350)
T d1q5ka_         249 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD  307 (350)
T ss_dssp             HHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGG
T ss_pred             hhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhc
Confidence               00    00000000000011111234567888999999999999999999998875

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-43  Score=358.19  Aligned_cols=269  Identities=24%  Similarity=0.284  Sum_probs=211.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCCeEEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      ++|+..++||+|+||+||+|++..+++.||||+++..  .....+++.+|+.++++++||||++++++|.+....++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            4788899999999999999999999999999998654  33456789999999999999999999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccccCCc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEHAKGS  509 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~~~~~  509 (645)
                      ++.+++|..++ ...+.+++..+..++.|+++||+|||+   ++|+||||||+|||++.++.+||+|||.++....... 
T Consensus        82 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~q~~~aL~~lH~---~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~-  156 (292)
T d1unla_          82 FCDQDLKKYFD-SCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR-  156 (292)
T ss_dssp             CCSEEHHHHHH-HTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS-
T ss_pred             ecccccccccc-ccccccchhHHHHHHHHHHHHHHHhhc---CCEeeecccCcccccccCCceeeeecchhhcccCCCc-
Confidence            99998887766 455678999999999999999999999   8999999999999999999999999999987654322 


Q ss_pred             ceeecccCccccCccccccCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcc------cccc
Q 042831          510 QTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL------LEAV  582 (645)
Q Consensus       510 ~~~~~~gt~~y~aPE~~~~~~-~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l------~~~~  582 (645)
                      ......++..|+|||.+.... ++.++|||||||++|||++|+.||.....  .......+........-      ....
T Consensus       157 ~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (292)
T d1unla_         157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND--VDDQLKRIFRLLGTPTEEQWPSMTKLP  234 (292)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS--HHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred             cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCC--HHHHHHHHHhhcCCCChhhhhhhhhcc
Confidence            233345788899999887665 69999999999999999999999764332  22222222222221100      0000


Q ss_pred             Cc----cc-----cCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          583 DP----RL-----CRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       583 d~----~l-----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      +.    ..     ...........+.+|+.+||++||++|||++|+++|.|+..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~  288 (292)
T d1unla_         235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSS
T ss_pred             cccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcC
Confidence            00    00     00111122345677889999999999999999999999864

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-43  Score=371.06  Aligned_cols=260  Identities=22%  Similarity=0.307  Sum_probs=198.9

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC------
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK------  422 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~------  422 (645)
                      .++|...++||+|+||+||+|++..+|+.||||+++..  +....+.+.+|+++|++++||||++++++|...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            45788899999999999999999999999999999753  3445678899999999999999999999997654      


Q ss_pred             eEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          423 ELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       423 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      ++++||||+ +.+|......  ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+|++|||+++.
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~  170 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQ  170 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             eEEEEEecc-cccHHHHHHh--ccccHHHHHHHHHHHHHHHHHHHh---CCCcccccCcchhhcccccccccccccceec
Confidence            579999999 5667666533  469999999999999999999998   9999999999999999999999999999986


Q ss_pred             ccccCCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcC------
Q 042831          503 VEHAKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGN------  575 (645)
Q Consensus       503 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~------  575 (645)
                      ...    ..+...||+.|+|||.+.+. .++.++||||+||++|||++|+.||........   ..........      
T Consensus       171 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~  243 (346)
T d1cm8a_         171 ADS----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ---LKEIMKVTGTPPAEFV  243 (346)
T ss_dssp             CCS----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCHHHH
T ss_pred             cCC----ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHH---HHHHHhccCCCcHHHH
Confidence            543    23446799999999998764 578999999999999999999999976532211   1111110000      


Q ss_pred             ---------------CccccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          576 ---------------GKLLEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       576 ---------------~~l~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                                     ......--+......+    ..+.+|+.+||+.||++|||++|+++|.++..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s----~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~  306 (346)
T d1cm8a_         244 QRLQSDEAKNYMKGLPELEKKDFASILTNAS----PLAVNLLEKMLVLDAEQRVTAGEALAHPYFES  306 (346)
T ss_dssp             HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCC----HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred             hhhcchhhhhhhccCCcccccchHHhccCCC----HHHHHHHHHHCcCChhHCcCHHHHhcChhhCc
Confidence                           0000000001111122    35667889999999999999999999998863

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-42  Score=364.68  Aligned_cols=267  Identities=21%  Similarity=0.271  Sum_probs=201.7

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeCC----eEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEKK----ELL  425 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~~----~~~  425 (645)
                      +.+|...++||+|+||+||+|++..+|+.||||+++.. .....+++.+|+++|++++|||++++++++....    ..+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            45688899999999999999999999999999999754 3445678999999999999999999999987543    234


Q ss_pred             EEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccccc
Q 042831          426 LVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLVEH  505 (645)
Q Consensus       426 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~~~  505 (645)
                      ++++|+.+|+|.+++..  ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        87 ~l~~~~~~g~L~~~l~~--~~l~~~~i~~i~~qil~al~yLH~---~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~  161 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKT--QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP  161 (345)
T ss_dssp             EEEEECCCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             EEEEeecCCchhhhhhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence            45566779999999854  358999999999999999999999   8999999999999999999999999999986643


Q ss_pred             cCC--cceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcccc--
Q 042831          506 AKG--SQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLE--  580 (645)
Q Consensus       506 ~~~--~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~--  580 (645)
                      ...  .......||+.|+|||++..+ .++.++||||+||+++||++|+.||......+..   ..............  
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~  238 (345)
T d1pmea_         162 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL---NHILGILGSPSQEDLN  238 (345)
T ss_dssp             GGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCSCCHHHHH
T ss_pred             CCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHH---HHHhhhccCCChhhhh
Confidence            322  223446799999999998554 5789999999999999999999999754422111   11111111000000  


Q ss_pred             ----------c-cCccccCCCCHH-----HHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          581 ----------A-VDPRLCRDFDGQ-----QIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       581 ----------~-~d~~l~~~~~~~-----~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                                . ..+.. ...+..     ....+.+++.+||+.||++|||+.|+++|.++.
T Consensus       239 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~  299 (345)
T d1pmea_         239 CIINLKARNYLLSLPHK-NKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE  299 (345)
T ss_dssp             TCCCHHHHHHHHTSCCC-CCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGT
T ss_pred             hhhhhhhhcccccCCcc-CCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhc
Confidence                      0 00000 001111     113567889999999999999999999998765

>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=100.00  E-value=1.9e-42  Score=335.14  Aligned_cols=198  Identities=30%  Similarity=0.502  Sum_probs=166.9

Q ss_pred             CceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-CCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCC
Q 042831           32 ASALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSY  109 (645)
Q Consensus        32 ~~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~  109 (645)
                      |..++|+|++|++.   ++.|+ ||.+.++|.||||+ ..+++|||+|++||+||++.+++++||+|+|+|.|.+.+...
T Consensus         1 a~~~sF~~~~F~~~---~l~l~GdA~v~~~g~i~LT~~~~~~~G~~~y~~Pi~l~~~~~~~~~sF~t~F~f~i~~~~~~~   77 (204)
T d1dhkb_           1 ATETSFIIDAFNKT---NLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVASFDTNFTMNIRTHRQAN   77 (204)
T ss_dssp             CCCCEEEESSCCGG---GEEEESSEEECTTSCEEESSSCSSEEEEEEESSCEESEETTTTEECEEEEEEEEEEECCC---
T ss_pred             CccceEECCCCCcc---CeeEecceEEcCCCeEEeCCCCCCCEEEEEeCCCEeccCCCCcccccEEEEEEEEEecCCCCC
Confidence            35688999999753   79999 99987889999999 777999999999999999999999999999999999987777


Q ss_pred             CCCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCcccceeeecccCCC
Q 042831          110 YADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNVSWWSDVKS  189 (645)
Q Consensus       110 ~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~s~~~~~~~~~~~~  189 (645)
                      +||||||+++|....                    ..++.|||||||++       ||+++|+|+..+ ....+...+.+
T Consensus        78 ~gdGlaf~~~~~~~~--------------------~~~~~~~vefDt~~-------n~~~~d~~~~~~-~~~~~~~~~~~  129 (204)
T d1dhkb_          78 SAVGLDFVLVPVQPE--------------------SKGDTVTVEFDTFL-------SRISIDVNNNDI-KSVPWDVHDYD  129 (204)
T ss_dssp             CCSEEEEEEEEC--------------------------CCEEEEEETTT-------TEEEEEETTEEE-EEEECCGGGTT
T ss_pred             CCceEEEEecCCCCC--------------------CCCcEeeEeeEccc-------ccccCccccccc-cccccccEecC
Confidence            899999999986521                    12356999999987       588888887543 23344567889


Q ss_pred             CceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccce---eeeEEEEEeeccCc
Q 042831          190 GRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVD---FAIFSIYSWEFNSS  262 (645)
Q Consensus       190 g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~---~~~~~i~~wsf~~~  262 (645)
                      |+.++|||+||+.+++|+|++.+.+.  +..+.|++.+||++++|++|||||||+||..   .|.|+|++|+|++.
T Consensus       130 g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~l~~~vdL~~~l~~~~yvGFSAaTG~~~~~~e~H~IlsWsFss~  203 (204)
T d1dhkb_         130 GQNAEVRITYNSSTKVFSVSLSNPST--GKSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLSWSFSSK  203 (204)
T ss_dssp             TSCEEEEEEEETTTTEEEEEEECTTT--CCEEEEEEECCCCSGGGSEEEEEEEEEECSGGGSCCEEEEEEEEEEEE
T ss_pred             CCEEEEEEEEcCCCEEEEEEEecCCC--CCceeEEEEecchhccCCcEEEEEEeecCCCCCCceeeEEEEEEEEec
Confidence            99999999999999999999997664  5578899999999999999999999999964   57899999999864

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-43  Score=369.26  Aligned_cols=258  Identities=22%  Similarity=0.295  Sum_probs=208.6

Q ss_pred             cCCCCCCccCcCCcEEEEEEEE---cCCCeEEEEEEeccC----ChhhHHHHHHHHHHHHhcCC-CCccEEEeeeeeCCe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFF---RETNSYIAVKRVSQG----SKQGIKEYASEVKIISRLRH-RNLVQLLGWCHEKKE  423 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~---~~~~~~vavK~~~~~----~~~~~~~~~~Ei~~l~~l~H-~nlv~l~~~~~~~~~  423 (645)
                      ++|+..++||+|+||+||+|+.   +.+|+.||||.++..    .....+.+.+|++++.+++| |||+++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            5688999999999999999987   446899999998643    22345678899999999977 899999999999999


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      .++||||+.+|+|.+++... ..+++.....++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.+
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~-~~~~e~~~~~~~~Qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~  179 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEF  179 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             eeeeeecccccHHHHHHHhc-ccccHHHHHHHHHHHHHHHHHhhc---CCEEeccCCccceeecCCCCEEEeeccchhhh
Confidence            99999999999999998654 356788899999999999999999   89999999999999999999999999999876


Q ss_pred             cccCCcceeecccCccccCccccccC--CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTG--KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA  581 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~  581 (645)
                      ............|++.|++||.+...  .++.++|||||||+||||++|+.||......+....+   .......     
T Consensus       180 ~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i---~~~~~~~-----  251 (322)
T d1vzoa_         180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI---SRRILKS-----  251 (322)
T ss_dssp             CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHH---HHHHHHC-----
T ss_pred             cccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HHhcccC-----
Confidence            55444445557899999999998764  4688999999999999999999999866544332221   1111111     


Q ss_pred             cCccccCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHhccC
Q 042831          582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRP-----SIRQVIHVLNFE  626 (645)
Q Consensus       582 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~~  626 (645)
                       .+.+..    .....+..++.+||++||++||     |++|+++|.++.
T Consensus       252 -~~~~~~----~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~  296 (322)
T d1vzoa_         252 -EPPYPQ----EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ  296 (322)
T ss_dssp             -CCCCCT----TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGT
T ss_pred             -CCCCcc----cCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhc
Confidence             111111    2235677788999999999999     589999998875

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.4e-42  Score=353.81  Aligned_cols=258  Identities=19%  Similarity=0.252  Sum_probs=199.1

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCccE-EEeeeeeCCeEEEEEEe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNLVQ-LLGWCHEKKELLLVYEF  430 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nlv~-l~~~~~~~~~~~lV~Ey  430 (645)
                      ++|+..++||+|+||.||+|++..+|+.||||.+.....  .+++..|++++++++|+|++. +.++..+.+..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            568899999999999999999999999999998865432  245788999999998776555 45556777889999999


Q ss_pred             cCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEEC---CCCcEEEeeccCcccccccC
Q 042831          431 MPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLD---SNFNAKIGDFGLARLVEHAK  507 (645)
Q Consensus       431 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld---~~~~~kl~DfGla~~~~~~~  507 (645)
                      + +++|...+......+++..+..++.|++.||+|||+   ++|+||||||+|||++   .+..+||+|||+++......
T Consensus        85 ~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~  160 (299)
T d1ckia_          85 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  160 (299)
T ss_dssp             C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTT
T ss_pred             c-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHhhccccccCCCceeeeeccCcceeccccc
Confidence            9 667777776667789999999999999999999999   9999999999999986   45579999999999765432


Q ss_pred             C------cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCccccc
Q 042831          508 G------SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKLLEA  581 (645)
Q Consensus       508 ~------~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l~~~  581 (645)
                      .      .......||+.|+|||.+.+..++.++|||||||++|||++|+.||......................     
T Consensus       161 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~-----  235 (299)
T d1ckia_         161 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-----  235 (299)
T ss_dssp             TCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHS-----
T ss_pred             cccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCC-----
Confidence            2      22345679999999999999999999999999999999999999998655433222221111110000     


Q ss_pred             cCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          582 VDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       582 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                      ..+.+...++    ..+.+++..|++.+|++||+++++.+.|+
T Consensus       236 ~~~~~~~~~p----~~~~~li~~cl~~~p~~RP~~~~i~~~l~  274 (299)
T d1ckia_         236 PIEVLCKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFR  274 (299)
T ss_dssp             CHHHHTTTSC----HHHHHHHHHHHHSCTTCCCCHHHHHHHHH
T ss_pred             ChhHhccCCC----HHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence            0111222222    35677888999999999999988766654

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=3.1e-42  Score=359.72  Aligned_cols=263  Identities=19%  Similarity=0.247  Sum_probs=202.9

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCCccEEEeeeee--CCeEEEEE
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLGWCHE--KKELLLVY  428 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~--~~~~~lV~  428 (645)
                      ++|...++||+|+||+||+|++..+|+.||||+++...   .+++.+|+++|.+++ ||||+++++++..  ....++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            57999999999999999999999999999999986543   457889999999996 9999999999874  45699999


Q ss_pred             EecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC-cEEEeeccCcccccccC
Q 042831          429 EFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF-NAKIGDFGLARLVEHAK  507 (645)
Q Consensus       429 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~-~~kl~DfGla~~~~~~~  507 (645)
                      |||++++|....    +.+++..++.++.||+.||.|||+   ++|+||||||+|||++.++ .+||+|||+++......
T Consensus       112 e~~~~~~L~~~~----~~l~e~~i~~i~~qil~aL~~LH~---~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~  184 (328)
T d3bqca1         112 EHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ  184 (328)
T ss_dssp             ECCCSCBGGGTT----TSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC
T ss_pred             eecCCCcHHHHh----cCCCHHHHHHHHHHHHHHHHHHhh---cccccccccccceEEcCCCCeeeecccccceeccCCC
Confidence            999999997764    468999999999999999999999   9999999999999998654 69999999998665332


Q ss_pred             CcceeecccCccccCccccccCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchh-HH-H-----HHHHHhcCCcc-
Q 042831          508 GSQTTVLAGTMGYMAPECATTGK-ASKESDVYSFGIVALEIACGRKPINPKAPQGQVS-LL-Q-----WVWDLYGNGKL-  578 (645)
Q Consensus       508 ~~~~~~~~gt~~y~aPE~~~~~~-~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~-l~-~-----~~~~~~~~~~l-  578 (645)
                        ......+|+.|+|||.+.+.. ++.++||||+||+++||++|+.||.......... .+ .     ........... 
T Consensus       185 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~  262 (328)
T d3bqca1         185 --EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE  262 (328)
T ss_dssp             --CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred             --cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccc
Confidence              334467899999999987654 7999999999999999999999997654321110 00 0     00001000000 


Q ss_pred             -----ccccC-------ccccC-CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          579 -----LEAVD-------PRLCR-DFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       579 -----~~~~d-------~~l~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                           .....       ..... .........+.+|+.+||+.||++|||++|+++|.+|.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~  323 (328)
T d3bqca1         263 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY  323 (328)
T ss_dssp             CCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             cCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence                 00000       00000 00111224567888999999999999999999999986

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=7.1e-42  Score=351.08  Aligned_cols=259  Identities=17%  Similarity=0.233  Sum_probs=208.9

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCC-CCccEEEeeeeeCCeEEEEEE
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH-RNLVQLLGWCHEKKELLLVYE  429 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H-~nlv~l~~~~~~~~~~~lV~E  429 (645)
                      .++|.+.++||+|+||.||+|++..+|+.||||.+.....  ..++.+|++.+..++| +|++.+++++..+...++|||
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme   81 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   81 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence            4678999999999999999999999999999998865432  2456789999999975 899999999999999999999


Q ss_pred             ecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECC-----CCcEEEeeccCccccc
Q 042831          430 FMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDS-----NFNAKIGDFGLARLVE  504 (645)
Q Consensus       430 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~-----~~~~kl~DfGla~~~~  504 (645)
                      |+ +++|.+++...+..+++..+..++.|++.||.|||+   ++|+||||||+|||++.     ++.+||+|||+++...
T Consensus        82 ~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~  157 (293)
T d1csna_          82 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  157 (293)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             ec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHH---CCceeccCCccceeecCcccccCCceEEcccceeEEcc
Confidence            99 789999987777789999999999999999999998   99999999999999974     5789999999998765


Q ss_pred             ccCC------cceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcc
Q 042831          505 HAKG------SQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL  578 (645)
Q Consensus       505 ~~~~------~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l  578 (645)
                      ....      .......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+........ 
T Consensus       158 ~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~-  236 (293)
T d1csna_         158 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP-  236 (293)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC-
T ss_pred             cCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCC-
Confidence            3321      123446799999999999999999999999999999999999999986554433322222221111111 


Q ss_pred             ccccCccccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhc
Q 042831          579 LEAVDPRLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLN  624 (645)
Q Consensus       579 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  624 (645)
                          .+.+...++    +.+.+++..|++.+|++||+++.+.+.|+
T Consensus       237 ----~~~l~~~~p----~~l~~ii~~~~~~~~~~rP~y~~l~~~l~  274 (293)
T d1csna_         237 ----LRELCAGFP----EEFYKYMHYARNLAFDATPDYDYLQGLFS  274 (293)
T ss_dssp             ----HHHHTTTSC----HHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred             ----hHHhcCCCC----HHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence                112223333    34667778899999999999888877665

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-42  Score=360.10  Aligned_cols=267  Identities=21%  Similarity=0.225  Sum_probs=197.8

Q ss_pred             cCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeee------CCe
Q 042831          352 NDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHE------KKE  423 (645)
Q Consensus       352 ~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~------~~~  423 (645)
                      ++|...++||+|+||+||+|++..+|+.||||++...  +....+++.+|+.++++++||||+++++++..      .++
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            6789999999999999999999999999999999754  34456678999999999999999999999863      368


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      +|+|||||.++.+. .+   ...+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+|++|||+++..
T Consensus        97 ~~iv~Ey~~~~l~~-~~---~~~~~~~~i~~~~~qil~gl~~LH~---~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~  169 (355)
T d2b1pa1          97 VYLVMELMDANLCQ-VI---QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  169 (355)
T ss_dssp             EEEEEECCSEEHHH-HH---TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             eEEEEeccchHHHH-hh---hcCCCHHHHHHHHHHHHHHHHHhhh---cccccccCCccccccccccceeeechhhhhcc
Confidence            89999999765554 33   2458999999999999999999999   99999999999999999999999999998865


Q ss_pred             cccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHH----------------H
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLL----------------Q  567 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~----------------~  567 (645)
                      ...  .......+|+.|+|||++.+..++.++||||+||+++||++|+.||...........+                .
T Consensus       170 ~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (355)
T d2b1pa1         170 GTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP  247 (355)
T ss_dssp             -------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCH
T ss_pred             ccc--cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhh
Confidence            432  2334567899999999999999999999999999999999999999754321111000                0


Q ss_pred             HHHHHhcCC-cc-----ccccCccccCC---CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccCC
Q 042831          568 WVWDLYGNG-KL-----LEAVDPRLCRD---FDGQQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFEA  627 (645)
Q Consensus       568 ~~~~~~~~~-~l-----~~~~d~~l~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  627 (645)
                      ......... ..     ...........   ........+.+|+.+||+.||++|||++|+++|.|+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~  316 (355)
T d2b1pa1         248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  316 (355)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             hHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence            000000000 00     00111111111   11234567888999999999999999999999999853

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-41  Score=356.10  Aligned_cols=263  Identities=22%  Similarity=0.290  Sum_probs=200.6

Q ss_pred             hcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccC--ChhhHHHHHHHHHHHHhcCCCCccEEEeeeeeC-----Ce
Q 042831          351 TNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG--SKQGIKEYASEVKIISRLRHRNLVQLLGWCHEK-----KE  423 (645)
Q Consensus       351 ~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nlv~l~~~~~~~-----~~  423 (645)
                      .++|...++||+|+||+||+|++..+|+.||||+++..  +....+++.+|+++|++++|||++++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            46788999999999999999999999999999999754  344566789999999999999999999998633     34


Q ss_pred             EEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEeeccCcccc
Q 042831          424 LLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLARLV  503 (645)
Q Consensus       424 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~~~  503 (645)
                      .+++++|+.+|+|.+++..  +.+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+|++|||++...
T Consensus        97 ~~~i~~~~~gg~L~~~~~~--~~l~e~~~~~i~~qil~aL~~LH~---~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~  171 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT  171 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC----CC
T ss_pred             eEEEEEeecCCchhhhccc--ccccHHHHHHHHHHHHHHHHHHHh---CCCcccccCCccccccccccccccccchhccc
Confidence            4667778889999998843  469999999999999999999998   89999999999999999999999999999754


Q ss_pred             cccCCcceeecccCccccCccccccC-CCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCchhHHHHHHHHhcCCcc--c-
Q 042831          504 EHAKGSQTTVLAGTMGYMAPECATTG-KASKESDVYSFGIVALEIACGRKPINPKAPQGQVSLLQWVWDLYGNGKL--L-  579 (645)
Q Consensus       504 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~l--~-  579 (645)
                      ..    ......|++.|+|||.+.+. .++.++|||||||++|||++|+.||......   .....+.........  . 
T Consensus       172 ~~----~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~---~~~~~i~~~~~~~~~~~~~  244 (348)
T d2gfsa1         172 DD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI---DQLKLILRLVGTPGAELLK  244 (348)
T ss_dssp             TG----GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCHHHHT
T ss_pred             Cc----ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHH---HHHHHHHHhcCCCChHHhh
Confidence            32    23345789999999987665 4689999999999999999999999754322   111111111110000  0 


Q ss_pred             --------cccC--ccccCCCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhccC
Q 042831          580 --------EAVD--PRLCRDFDG-----QQIERLMIVGLWCAHPDENLRPSIRQVIHVLNFE  626 (645)
Q Consensus       580 --------~~~d--~~l~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  626 (645)
                              ....  +.. .....     .....+.+|+.+||+.||++|||++|+++|.|+.
T Consensus       245 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~  305 (348)
T d2gfsa1         245 KISSESARNYIQSLTQM-PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA  305 (348)
T ss_dssp             TCCCHHHHHHHTTSCCC-CCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             hccchhhhhhhhhcccC-CCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhC
Confidence                    0000  000 00000     1124567888999999999999999999999985

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.5e-37  Score=326.53  Aligned_cols=266  Identities=20%  Similarity=0.232  Sum_probs=198.2

Q ss_pred             CCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-----------CCCccEEEeeeee-
Q 042831          353 DFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-----------HRNLVQLLGWCHE-  420 (645)
Q Consensus       353 ~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----------H~nlv~l~~~~~~-  420 (645)
                      +|...++||+|+||+||+|++..+|+.||||+++... ...+.+.+|+.++++++           |+||+++++++.. 
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            4888999999999999999999999999999997543 23457788999888875           5789999998764 


Q ss_pred             -CCeEEEEEEecCCCChhhhhh--hcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCC------c
Q 042831          421 -KKELLLVYEFMPNGSLDSHLF--KENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNF------N  491 (645)
Q Consensus       421 -~~~~~lV~Ey~~~gsL~~~l~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~------~  491 (645)
                       ....+++++++..+.......  .....+++..+..++.||+.||.|||+  ..+|+||||||+|||++.++      .
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~~~  170 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQ  170 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred             cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCcccccce
Confidence             356777777766654433332  345678999999999999999999997  37899999999999998654      3


Q ss_pred             EEEeeccCcccccccCCcceeecccCccccCccccccCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCCCch----hHHH
Q 042831          492 AKIGDFGLARLVEHAKGSQTTVLAGTMGYMAPECATTGKASKESDVYSFGIVALEIACGRKPINPKAPQGQV----SLLQ  567 (645)
Q Consensus       492 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~sDV~SfGvll~elltG~~pf~~~~~~~~~----~l~~  567 (645)
                      ++++|||.+.....    ......||+.|+|||++....++.++||||+||+++||++|+.||.........    .+..
T Consensus       171 ~kl~dfg~s~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~  246 (362)
T d1q8ya_         171 IKIADLGNACWYDE----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ  246 (362)
T ss_dssp             EEECCCTTCEETTB----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred             eeEeeccccccccc----ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHH
Confidence            99999999875432    223457999999999999999999999999999999999999999755432211    1111


Q ss_pred             HHHHHhcC------------------CccccccCc----------cccCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Q 042831          568 WVWDLYGN------------------GKLLEAVDP----------RLCRDFDGQQIERLMIVGLWCAHPDENLRPSIRQV  619 (645)
Q Consensus       568 ~~~~~~~~------------------~~l~~~~d~----------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev  619 (645)
                      .++ ..+.                  ......+..          .............+.+|+.+||+.||++|||++|+
T Consensus       247 ~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~  325 (362)
T d1q8ya_         247 IIE-LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL  325 (362)
T ss_dssp             HHH-HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred             HHH-HhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            111 1100                  000000000          00123445677889999999999999999999999


Q ss_pred             HHHhccC
Q 042831          620 IHVLNFE  626 (645)
Q Consensus       620 l~~L~~~  626 (645)
                      |+|.++.
T Consensus       326 L~Hp~f~  332 (362)
T d1q8ya_         326 VNHPWLK  332 (362)
T ss_dssp             HTCGGGT
T ss_pred             hcCcccC
Confidence            9999986

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

Probab=99.96  E-value=3.5e-30  Score=250.08  Aligned_cols=117  Identities=39%  Similarity=0.645  Sum_probs=107.9

Q ss_pred             CCCEEEEEEecccCC--CCCCCCceeeecCCCcccceeeecccCCCCceeEEEEEEcCCCceEEEEEecCCCccccccee
Q 042831          146 SIPFVAVEFDVYVNS--WDPTFSHVGIDINSVKSKKNVSWWSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGL  223 (645)
Q Consensus       146 ~~~~vaVEfDt~~n~--~d~~~~hvgidvns~~s~~~~~~~~~~~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~l  223 (645)
                      .|++|||||||++|.  +||++||||||+|++.|.++..|  ++.+|+.++|||+||+.+++|+|++...+   +..|++
T Consensus         1 an~ivAVEFDT~~N~~~~Dp~~nHIgIdvns~~S~~~~~~--~l~~G~~~~v~I~Yd~~~~~L~V~~~~~~---~~~~~l   75 (237)
T d1nlsa_           1 ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKW--NMQNGKVGTAHIIYNSVDKRLSAVVSYPN---ADSATV   75 (237)
T ss_dssp             CCCEEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEEC--CCCTTCEEEEEEEEETTTTEEEEEEECTT---SCCEEE
T ss_pred             CCCEEEEEEECCcCCCCCCCCCCEEEEEeCCCCccceecc--cccCCCEEEEEEEEecCCcEEEEEEecCC---CCCeEE
Confidence            378999999999986  89999999999999999988887  57899999999999999999999998644   557889


Q ss_pred             eEeeccCcCCCCceEEEEeecccceeeeEEEEEeeccCcccccc
Q 042831          224 DYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSLEMDD  267 (645)
Q Consensus       224 s~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~wsf~~~~~~~~  267 (645)
                      ++.|||+++|+++|||||+||||...|.|+|++|+|++.+.+..
T Consensus        76 s~~vdL~~~l~~~vyvGFSAsTG~~~~~h~I~sWsFsS~~~~~s  119 (237)
T d1nlsa_          76 SYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLKSNS  119 (237)
T ss_dssp             EEECCGGGTSCSEEEEEEEEECSSSCCCCEEEEEEEEEEEEESS
T ss_pred             EEEEChHHhCCCcEEEEEEeecCCCccceEEEEEEEEeeccccc
Confidence            99999999999999999999999999999999999999887764

>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=1.8e-25  Score=219.56  Aligned_cols=201  Identities=18%  Similarity=0.144  Sum_probs=140.0

Q ss_pred             eeEEeCCCCCCC--CCCeEEe-ecccCCCCcEecCC-CCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCC
Q 042831           35 LTFNYTSFSPQY--DDNITYE-RAYPDSNRVIQLPA-NRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYY  110 (645)
Q Consensus        35 ~~f~f~~f~~~~--~~~~~~~-~a~~~~~~~~~Lt~-~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~  110 (645)
                      .+|+.+.+..+.  ..+..++ +|.+ .++.|+||+ ..+++|+++|++|+++        .+|+|+|+|.+.... ..+
T Consensus         9 ~sf~~P~~~~~~~~~~~w~~~G~a~i-~~~~i~LT~~~~~~~G~v~~~~p~~~--------~~F~~~f~f~~~~~~-~~g   78 (228)
T d1gv9a_           9 YSFKGPHLVQSDGTVPFWAHAGNAIP-SADQIRIAPSLKSQRGSVWTKTKAAF--------ENWEVEVTFRVTGRG-RIG   78 (228)
T ss_dssp             GCEECSSCSCTTSCBTTEEEEETCEE-CSSCEEEECSSTTCEEEEEESSCBCC--------SSEEEEEEEEEECSS-SCC
T ss_pred             eccCCCcccCCCCCccceEEeeeEEE-ECCEEEECCCCCCCEEEEEeCCCccc--------cCcEEEEEEeccCCC-CCC
Confidence            355556554321  3356888 9988 678999999 7789999999999987        369999999998753 467


Q ss_pred             CCeEEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCccccee---------
Q 042831          111 ADGLAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSKKNV---------  181 (645)
Q Consensus       111 g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~s~~~~---------  181 (645)
                      ||||||+|+|...     ..|+.+|....       .+-+||||||+.|.+|++.+|+.+++|........         
T Consensus        79 gdG~aF~i~~~~~-----~~g~~~G~~~~-------~~glaVefDt~~n~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  146 (228)
T d1gv9a_          79 ADGLAIWYTENQG-----LDGPVFGSADM-------WNGVGIFFDSFDNDGKKNNPAIVVVGNNGQINYDHQNDGATQAL  146 (228)
T ss_dssp             CCEEEEEEESSCC-----CEEEETTECSC-------CEEEEEEEECCCC-----CCEEEEEEEESCCCCCHHHHHHHHCS
T ss_pred             CCEEEEEEecCCC-----CCCCccCcCCC-------CceEEEEEEcccccCCCCCCcEEEEecCCcceeeecCCCccccc
Confidence            9999999998752     34555554322       23489999999999999999999988764321111         


Q ss_pred             -eecccC-CCCceeEEEEEEcCCCceEEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccceeeeEEEEEeec
Q 042831          182 -SWWSDV-KSGRRNEAWISYNSSTHNLSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEF  259 (645)
Q Consensus       182 -~~~~~~-~~g~~~~~~I~Y~~~~~~l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~wsf  259 (645)
                       .+.... .++..+++||+|+  .+.|+|.+..........+.++..++ ...+++++|+||||+||...+.|.|++|.+
T Consensus       147 ~~~~~~~~~~~~~~~i~~~~~--~~~l~v~i~~~~~~~~~~~~~~~~~~-~~~l~~~~y~GFTAsTG~~~~~H~I~s~~~  223 (228)
T d1gv9a_         147 ASCQRDFRNKPYPVRAKITYY--QKTLTVMINNGFTPDKNDYEFCAKVE-NMVIPTQGHFGISAATGGLADDHDVLSFLT  223 (228)
T ss_dssp             EEECCCCBSCSSCEEEEEEEE--TTEEEEEEECSSCCCTTCCEEEEEET-TCCCCSSBEEEEEEECCSSCCEEEEEEEEE
T ss_pred             cceeeeecCCceEEEEEEEec--CCEEEEEEeccccCCCcceeEEEEec-ccccCCCEEEEEEEeCCCCcCeEEEEEEEE
Confidence             111122 2344556666665  68899999865544444444444444 556789999999999999999999999987


Q ss_pred             c
Q 042831          260 N  260 (645)
Q Consensus       260 ~  260 (645)
                      .
T Consensus       224 ~  224 (228)
T d1gv9a_         224 F  224 (228)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

Probab=99.92  E-value=1.8e-25  Score=216.66  Aligned_cols=108  Identities=28%  Similarity=0.553  Sum_probs=96.1

Q ss_pred             CCCceeeEEeCCCCCCCCCCeEEe-ecccCCCCcEecCC-C------CCceEEEEeCCceecccCCCCCccceeEEEEEE
Q 042831           30 PLASALTFNYTSFSPQYDDNITYE-RAYPDSNRVIQLPA-N------RETAGRATYNQSMRLWDKATGNLTDFTTHFSFV  101 (645)
Q Consensus        30 ~~~~~~~f~f~~f~~~~~~~~~~~-~a~~~~~~~~~Lt~-~------~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~  101 (645)
                      +.+.+++|+|++|+++ ..+|+++ ||.+.++|.||||+ +      ..++|||+|++||||||+ +|+++||+|+|+|.
T Consensus       121 ~esn~~~F~f~~F~~~-~~nl~l~G~A~i~~~G~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~d~-t~~~~SFsT~F~F~  198 (237)
T d1nlsa_         121 HETNALHFMFNQFSKD-QKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWES-SAVVASFEATFTFL  198 (237)
T ss_dssp             SCEEEEEEEESCCCTT-CTTEEEEETCEEEETTEEESSCBCTTSCBCSSCEEEEEESSCEECCCT-TEEEEEEEEEEEEE
T ss_pred             cccccceEEeeecCCC-CCCEEEeeeeEecCCCcEEecCCCCCCcccCcceEEEEeCCCEEEECC-CCcEeeEEEEEEEE
Confidence            3467899999999976 6789999 99987899999998 3      236899999999999996 89999999999999


Q ss_pred             EeeCCCCCCCCeEEEEEccCCCCCCCCCCCCcccCccCC
Q 042831          102 IDSRNSSYYADGLAFFLAPQGSKIPTNKGGGSFGLTKDN  140 (645)
Q Consensus       102 i~~~~~~~~g~GlaF~l~p~~~~~~~~~~g~~lGl~~~~  140 (645)
                      |.+.. ..+||||||||+|.+.++|.++.||||||||.+
T Consensus       199 I~~~~-~~~gdG~aF~iap~~~~~p~~~~g~~LGL~n~~  236 (237)
T d1nlsa_         199 IKSPD-SHPADGIAFFISNIDSSIPSGSTGRLLGLFPDA  236 (237)
T ss_dssp             CCCSS-SSCCCEEEEEEECTTCCCCTTCCGGGTTTCSSC
T ss_pred             EecCC-CCCCCCEEEEEeCCCCCCCCCCCCCeeeeccCC
Confidence            98865 457999999999998889999999999999875

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.85  E-value=3.4e-22  Score=190.39  Aligned_cols=163  Identities=15%  Similarity=0.159  Sum_probs=119.4

Q ss_pred             CCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCC------------------hhhHHHHHHHHHHHHhcCCCCccEEEe
Q 042831          355 NDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGS------------------KQGIKEYASEVKIISRLRHRNLVQLLG  416 (645)
Q Consensus       355 ~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~------------------~~~~~~~~~Ei~~l~~l~H~nlv~l~~  416 (645)
                      ...++||+|+||.||+|++. +|+.||||.++...                  .........|...+.++.|.+++..++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             hhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            35689999999999999985 58899999865321                  011234556889999999999998876


Q ss_pred             eeeeCCeEEEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeccCCCCCeEECCCCcEEEee
Q 042831          417 WCHEKKELLLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEWEQCVVHRDIKSSNIMLDSNFNAKIGD  496 (645)
Q Consensus       417 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlkp~NILld~~~~~kl~D  496 (645)
                      +..    .+++|||+++..+..        ++......++.|++++|.|||+   .+|+||||||+|||++++ .++|+|
T Consensus        82 ~~~----~~lvme~~~~~~~~~--------l~~~~~~~i~~ql~~~l~~lH~---~giiHrDiKP~NILv~~~-~~~liD  145 (191)
T d1zara2          82 WEG----NAVLMELIDAKELYR--------VRVENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVSEE-GIWIID  145 (191)
T ss_dssp             EET----TEEEEECCCCEEGGG--------CCCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEETT-EEEECC
T ss_pred             ecC----CEEEEEeeccccccc--------hhhHHHHHHHHHHHHHHHHHhh---CCEEEccCChhheeeeCC-CEEEEE
Confidence            532    379999998765543        2334456899999999999999   899999999999999865 589999


Q ss_pred             ccCcccccccCCcceeecccCccccCc------cccccCCCCcchhHHHHHHHH
Q 042831          497 FGLARLVEHAKGSQTTVLAGTMGYMAP------ECATTGKASKESDVYSFGIVA  544 (645)
Q Consensus       497 fGla~~~~~~~~~~~~~~~gt~~y~aP------E~~~~~~~t~~sDV~SfGvll  544 (645)
                      ||+|....+.....         |+..      |. ..+.++.++|+||..--+
T Consensus       146 FG~a~~~~~~~~~~---------~l~rd~~~~~~~-f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         146 FPQSVEVGEEGWRE---------ILERDVRNIITY-FSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             CTTCEETTSTTHHH---------HHHHHHHHHHHH-HHHHHCCCCCHHHHHHHH
T ss_pred             CCCcccCCCCCcHH---------HHHHHHHHHHHH-HcCCCCCcccHHHHHHHH
Confidence            99997654332111         1111      11 134578889999975433

>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp47p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.80  E-value=2.3e-19  Score=174.05  Aligned_cols=187  Identities=13%  Similarity=0.119  Sum_probs=123.4

Q ss_pred             EEeCCCCCCC--CCCeEEe-ecccCCCCcEecCCCCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCCCCe
Q 042831           37 FNYTSFSPQY--DDNITYE-RAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADG  113 (645)
Q Consensus        37 f~f~~f~~~~--~~~~~~~-~a~~~~~~~~~Lt~~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G  113 (645)
                      |+|+++....  .++..+. +|.+ .++.|+||...++.|.+|++.|+++++       +|+++|.|.|.... ..+|||
T Consensus        10 ~s~p~~~~~~~~~~~W~~~g~a~~-~~~~i~LTp~~~~~G~~w~~~~i~~~~-------~f~~~~~F~i~g~~-~~ggdG   80 (221)
T d2a6za1          10 YSLPDLINTRKVPNNWQTGEQASL-EEGRIVLTSNQNSKGSLWLKQGFDLKD-------SFTMEWTFRSVGYS-GQTDGG   80 (221)
T ss_dssp             GCBCCCTTCCSCCTTEEEEETCEE-ETTEEESCCSTTCEEEEEESSCEECCS-------CEEEEEEEEEESCC-SCCSCE
T ss_pred             ccCCCccccccCCCccEEcceeEE-ECCEEEECCCCCCceEEEECCccccCC-------CeEEEEEEEEeCCC-CCCCCc
Confidence            6666653221  4478888 8888 578999999667899999999999975       49999999998653 456999


Q ss_pred             EEEEEccCCCCCCCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeec--CCCccc-------ceeeec
Q 042831          114 LAFFLAPQGSKIPTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDI--NSVKSK-------KNVSWW  184 (645)
Q Consensus       114 laF~l~p~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidv--ns~~s~-------~~~~~~  184 (645)
                      |||++++...   ....|+.+|..+.       ..=+||||||+.|.    .+++.+.+  ++..-.       ....+.
T Consensus        81 ~af~~~~~~~---~~~~g~~~G~~~~-------~~GlaV~fDt~~n~----~~~~~~~~ndgt~~~~~~~~~~~~~~~~~  146 (221)
T d2a6za1          81 ISFWFVQDSN---IPRDKQLYNGPVN-------YDGLQLLVDNNGPL----GPTLRGQLNDGQKPVDKTKIYDQSFASCL  146 (221)
T ss_dssp             EEEEEEECSS---SCCCCTBTTBCTT-------CEEEEEEEESCSTT----SSEEEEEEEESSSCCCGGGHHHHCSEEEE
T ss_pred             EEEEEEcCCC---ccccccccccCCC-------CceEEEEEECCCCC----CCceEEEecCCCccccccCCcccccceee
Confidence            9999997652   2234444553221       12389999999873    23443433  332211       111233


Q ss_pred             cc-CCCCceeEEEEEEcCCCce-EEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccceeeeEEEE
Q 042831          185 SD-VKSGRRNEAWISYNSSTHN-LSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIY  255 (645)
Q Consensus       185 ~~-~~~g~~~~~~I~Y~~~~~~-l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~  255 (645)
                      .. ..++...+++|+|++.++. |.|.+...         +...++.-.+.++..|+||||+||...+.|.++
T Consensus       147 ~~~~~~~~~~~~~I~y~~~~~~~l~v~id~~---------~c~~~~~v~lp~~~~~fG~SA~TG~~~~~hd~~  210 (221)
T d2a6za1         147 MGYQDSSVPSTIRVTYDLEDDNLLKVQVDNK---------VCFQTRKVRFPSGSYRIGVTAQNGAVNNNAESF  210 (221)
T ss_dssp             CCCTTEEEEEEEEEEEEGGGTSEEEEEETTE---------EEEEESCCCCCSSEEEEEEEEECCSGGGCCCEE
T ss_pred             ecccCCCCCEEEEEEEecCccceEEEEecCc---------EeEEECCeecCCCCEEEEEEEccCCccCCCceE
Confidence            33 3467788999999876655 77877531         122233223336678999999999876666643

>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp46p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.79  E-value=1.5e-18  Score=167.57  Aligned_cols=186  Identities=15%  Similarity=0.095  Sum_probs=129.2

Q ss_pred             CCCeEEe-ecccCCCCcEecCCCCCceEEEEeCCceecccCCCCCccceeEEEEEEEeeCCCCCCCCeEEEEEccCCCCC
Q 042831           47 DDNITYE-RAYPDSNRVIQLPANRETAGRATYNQSMRLWDKATGNLTDFTTHFSFVIDSRNSSYYADGLAFFLAPQGSKI  125 (645)
Q Consensus        47 ~~~~~~~-~a~~~~~~~~~Lt~~~~~~G~~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~GlaF~l~p~~~~~  125 (645)
                      ..+..+. +|.+ .++.|+||...++.|++|++.|+++++       +|+++|+|.|.... ..+||||||++++.....
T Consensus        21 ~~~W~~~G~~~~-~~~~i~LTp~~~~~G~~w~~~~i~~~~-------~f~i~~~F~i~g~~-~~~~dG~afw~~~~~~~~   91 (218)
T d2a6va1          21 LSQWTLGDKVKL-EEGRFVLTPGKNTKGSLWLKPEYSIKD-------AMTIEWTFRSFGFR-GSTKGGLAFWLKQGNEGD   91 (218)
T ss_dssp             TTTEEEEETCEE-ETTEEESCCSTTCEEEEEESSCBCCSS-------CEEEEEEEEEESCC-SCCSCEEEEEEECSCCCC
T ss_pred             cCccEECCCEEE-ECCEEEECCCCCCeeEEEeCCcccccc-------cceEEEEEEEeCCC-CCCCCcEEEEEEcCCccc
Confidence            3468888 8888 678999999656889999999999875       49999999998653 556999999999865432


Q ss_pred             CCCCCCCcccCccCCCCCCCCCCEEEEEEecccCCCCCCCCceeeecCCCccc------c-eeeeccc-CCCCceeEEEE
Q 042831          126 PTNKGGGSFGLTKDNEPLNSSIPFVAVEFDVYVNSWDPTFSHVGIDINSVKSK------K-NVSWWSD-VKSGRRNEAWI  197 (645)
Q Consensus       126 ~~~~~g~~lGl~~~~~~~~~~~~~vaVEfDt~~n~~d~~~~hvgidvns~~s~------~-~~~~~~~-~~~g~~~~~~I  197 (645)
                      +.+..+|..+.++.          +||||||+.|.    .+||.+.+|.-...      . -..+..+ ..++...+++|
T Consensus        92 ~~~~~~G~~~~f~G----------laV~fDt~~n~----~~~i~~~~ndGs~~~~~~~d~~~g~c~~~~~~~~~~~~~~i  157 (218)
T d2a6va1          92 STELFGGSSKKFNG----------LMILLRLDDKL----GESVTAYLNDGTKDLDIESSPYFASCLFQYQDSMVPSTLRL  157 (218)
T ss_dssp             CCTBTTTBCSSCEE----------EEEEEEEETTT----EEEEEEEEEESSSCCCTTTSCCSEEEECCCSSCSSCEEEEE
T ss_pred             CCCcccccCCCcce----------EEEEEECCCCC----CCeEEEEeCCCCccccccCCcccceEEecccCCCCcEEEEE
Confidence            22223344444432          89999999873    36888877642210      0 0122222 34677889999


Q ss_pred             EEcCCCce-EEEEEecCCCcccccceeeEeeccCcCCCCceEEEEeecccceeeeEEEEEeeccCcc
Q 042831          198 SYNSSTHN-LSVAFTGFRNNLVVMQGLDYQVDLRQHLPEFVTFGFSMATGVDFAIFSIYSWEFNSSL  263 (645)
Q Consensus       198 ~Y~~~~~~-l~v~l~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~~~i~~wsf~~~~  263 (645)
                      .|++.+.. +.|.+..  .    ..+-+..|+|  ..++++|+||||+||...+.|.|++|.+...+
T Consensus       158 ~Y~~~~~~~l~v~id~--~----~c~~t~~i~l--p~~~~~yfG~SA~Tg~~~d~~dIls~~~~~~~  216 (218)
T d2a6va1         158 TYNPLDNHLLKLQMDN--R----VCFQTRKVKF--MGSSPFRIGTSAINDASKESFEILKMKLYDGV  216 (218)
T ss_dssp             EEEGGGTSEEEEEETT--E----EEEEESCCCG--GGTSCBEEEEEEECCTTCCEEEEEEEEEESSC
T ss_pred             EEECcccceEEEEeCC--c----EEEEECCeec--CCCCcEEEEEEECCCCCcCcEEEEEEEEEecc
Confidence            99875544 6776642  1    1111222333  34567999999999999999999999986543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.35  E-value=8.8e-07  Score=86.05  Aligned_cols=148  Identities=16%  Similarity=0.067  Sum_probs=101.5

Q ss_pred             HHHHhhcCCCCCCccCcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcC-CCCccEEEeeeeeCCeE
Q 042831          346 ELALATNDFNDDQKLGQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLR-HRNLVQLLGWCHEKKEL  424 (645)
Q Consensus       346 el~~~~~~f~~~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nlv~l~~~~~~~~~~  424 (645)
                      ++...-..|...+..+.+....||+...  +++.+.+|+...........+.+|...+..+. +--+.+++.++.+++..
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~--~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~   85 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS   85 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEEEEe--CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCce
Confidence            4555555666555444444578998753  35667889886554444456778888888774 33467788888888999


Q ss_pred             EEEEEecCCCChhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHHhhc----------------------------------
Q 042831          425 LLVYEFMPNGSLDSHLFKENSLLTWEFRYKIAQDLASGLLYLQEEW----------------------------------  470 (645)
Q Consensus       425 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------  470 (645)
                      ++||+++++.++.+.....      .....++.++++.|..||+..                                  
T Consensus        86 ~lv~~~l~G~~~~~~~~~~------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (263)
T d1j7la_          86 NLLMSEADGVLCSEEYEDE------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE  159 (263)
T ss_dssp             EEEEECCSSEEHHHHTTTC------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGS
T ss_pred             EEEEEeccccccccccccc------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhccc
Confidence            9999999998876544211      112345566666666666311                                  


Q ss_pred             ----------------------CCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          471 ----------------------EQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       471 ----------------------~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                                            ...++|+|+.|.|||++++...-|.||+.+.
T Consensus       160 ~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             TTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             ccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence                                  1237999999999999987666799999875

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.53  E-value=0.0002  Score=68.34  Aligned_cols=130  Identities=20%  Similarity=0.132  Sum_probs=83.8

Q ss_pred             ccCcCCc-EEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCC--CCccEEEeeeeeCCeEEEEEEecCCCC
Q 042831          359 KLGQGGF-GGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRH--RNLVQLLGWCHEKKELLLVYEFMPNGS  435 (645)
Q Consensus       359 ~LG~G~f-G~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H--~nlv~l~~~~~~~~~~~lV~Ey~~~gs  435 (645)
                      .+..|.. ..||+....+ +..+.+|.......   ..+..|...++.+..  -.+.+++.++.+.+..++||+++++-+
T Consensus        17 ~~~~G~s~~~v~r~~~~~-~~~~vlK~~~~~~~---~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~   92 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQG-RPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD   92 (255)
T ss_dssp             ECSCTTSSCEEEEEECTT-SCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEE
T ss_pred             EcCCcccCCeEEEEEeCC-CCEEEEEeCCccCH---hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccc
Confidence            3444543 6789887644 56688887654432   245678887777643  335678888888888999999998876


Q ss_pred             hhhhhhhcCCCCCHHHHHHHHHHHHHHHHHHH------------------------------------------------
Q 042831          436 LDSHLFKENSLLTWEFRYKIAQDLASGLLYLQ------------------------------------------------  467 (645)
Q Consensus       436 L~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH------------------------------------------------  467 (645)
                      +.+..      +..   ...+.++++.|.-||                                                
T Consensus        93 ~~~~~------~~~---~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (255)
T d1nd4a_          93 LLSSH------LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA  163 (255)
T ss_dssp             TTTSC------CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred             ccccc------ccH---HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHH
Confidence            64321      010   111222333333333                                                


Q ss_pred             ---hh----cCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          468 ---EE----WEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       468 ---~~----~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                         ..    ....++|+|+.|.|||++++..+-|.||+.+.
T Consensus       164 ~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         164 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence               11    01238999999999999987667899999875

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.41  E-value=0.00024  Score=72.91  Aligned_cols=78  Identities=15%  Similarity=0.163  Sum_probs=49.2

Q ss_pred             CCccCcCCcEEEEEEEEcCCCeEEEEEEeccC-------ChhhHHHHHHHHHHHHhcC-C--CCccEEEeeeeeCCeEEE
Q 042831          357 DQKLGQGGFGGVYKGFFRETNSYIAVKRVSQG-------SKQGIKEYASEVKIISRLR-H--RNLVQLLGWCHEKKELLL  426 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~~~~vavK~~~~~-------~~~~~~~~~~Ei~~l~~l~-H--~nlv~l~~~~~~~~~~~l  426 (645)
                      .+.||.|....||+.....+++.++||.-...       -.....+...|.+.|..+. +  ..+.+++.+  ++...++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            45689999999999998777888999964321       1112234456888887663 2  345566654  3445689


Q ss_pred             EEEecCCCCh
Q 042831          427 VYEFMPNGSL  436 (645)
Q Consensus       427 V~Ey~~~gsL  436 (645)
                      |||++++..+
T Consensus       109 vmE~L~~~~~  118 (392)
T d2pula1         109 VMEDLSHLKI  118 (392)
T ss_dssp             EECCCTTSEE
T ss_pred             EEeccCCccc
Confidence            9999977543

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.05  E-value=0.0088  Score=58.98  Aligned_cols=133  Identities=11%  Similarity=0.128  Sum_probs=76.7

Q ss_pred             EEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCc-----cEEE--eeeeeCCeEEEEEEecCCCChhh
Q 042831          366 GGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL-----VQLL--GWCHEKKELLLVYEFMPNGSLDS  438 (645)
Q Consensus       366 G~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nl-----v~l~--~~~~~~~~~~lV~Ey~~~gsL~~  438 (645)
                      -.||++...+ |+.+++|..+.. ....+++..|...+..|...++     +..-  ......+..+.++++++|..+..
T Consensus        36 N~vy~v~~~d-g~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~  113 (325)
T d1zyla1          36 NRVYQFQDED-RRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEA  113 (325)
T ss_dssp             SEEEEECCTT-CCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCS
T ss_pred             ceeEEEEcCC-CCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCC
Confidence            4799998854 778999987644 2244667788888888753222     1111  12345667889999997654321


Q ss_pred             ----h----------hhh--------cCCCCCH-------------------HHHHHHHHHHHHHHHHHHh----hcCCC
Q 042831          439 ----H----------LFK--------ENSLLTW-------------------EFRYKIAQDLASGLLYLQE----EWEQC  473 (645)
Q Consensus       439 ----~----------l~~--------~~~~l~~-------------------~~~~~i~~~ia~gL~yLH~----~~~~~  473 (645)
                          .          ++.        ....+++                   ..+..+...+...+..+..    ....+
T Consensus       114 ~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~  193 (325)
T d1zyla1         114 DNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVL  193 (325)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCE
T ss_pred             CCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCce
Confidence                0          010        0111111                   1111122222233333332    22457


Q ss_pred             eeeccCCCCCeEECCCCcEEEeeccCccc
Q 042831          474 VVHRDIKSSNIMLDSNFNAKIGDFGLARL  502 (645)
Q Consensus       474 ivH~Dlkp~NILld~~~~~kl~DfGla~~  502 (645)
                      +||+|+.+.|||++++  ..+.||+-+..
T Consensus       194 liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         194 RLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             ECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             eecCCCCcccEEEeCC--ceEEechhccc
Confidence            9999999999999754  45889998763

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.67  E-value=0.013  Score=59.49  Aligned_cols=75  Identities=16%  Similarity=0.194  Sum_probs=50.3

Q ss_pred             CCccCcCCcEEEEEEEEcCC-------CeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCCc-cEEEeeeeeCCeEEEEE
Q 042831          357 DQKLGQGGFGGVYKGFFRET-------NSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRNL-VQLLGWCHEKKELLLVY  428 (645)
Q Consensus       357 ~~~LG~G~fG~Vy~g~~~~~-------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~nl-v~l~~~~~~~~~~~lV~  428 (645)
                      .+.|+.|-.=.+|+....+.       ...|.+++... . .......+|..+++.+.-.++ .++++++.+    .+|+
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~-~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~  120 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-P-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  120 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-C-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-c-chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence            35688888899999987532       35566666542 2 223455678888888853344 477777753    6899


Q ss_pred             EecCCCChh
Q 042831          429 EFMPNGSLD  437 (645)
Q Consensus       429 Ey~~~gsL~  437 (645)
                      ||+++.+|.
T Consensus       121 efi~g~~l~  129 (395)
T d1nw1a_         121 EYIPSRPLS  129 (395)
T ss_dssp             CCCCEEECC
T ss_pred             EEeccccCC
Confidence            999876553

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.52  E-value=0.13  Score=49.71  Aligned_cols=156  Identities=11%  Similarity=0.031  Sum_probs=81.5

Q ss_pred             cChHHHHHhhcCCCCCCcc-----CcCCcEEEEEEEEcCCCeEEEEEEeccCChhhHHHHHHHHHHHHhcCCCC-----c
Q 042831          342 FPYKELALATNDFNDDQKL-----GQGGFGGVYKGFFRETNSYIAVKRVSQGSKQGIKEYASEVKIISRLRHRN-----L  411 (645)
Q Consensus       342 ~~~~el~~~~~~f~~~~~L-----G~G~fG~Vy~g~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~n-----l  411 (645)
                      .+.+|+.....+|...+..     ..|---+.|+....+ | .+++|+.....  ..+++..|++++..|.+.+     .
T Consensus         3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~-g-~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~p   78 (316)
T d2ppqa1           3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK-D-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP   78 (316)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS-C-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred             CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECC-C-cEEEEEcCCCC--CHHHHHHHHHHHHhhhhcccccccc
Confidence            4556677777777664443     355557789987654 4 48899875432  2234455677777764322     2


Q ss_pred             cEEE-e--eeeeCCeEEEEEEecCCCChhhh--------------hhh--cC-------CCCCH----------------
Q 042831          412 VQLL-G--WCHEKKELLLVYEFMPNGSLDSH--------------LFK--EN-------SLLTW----------------  449 (645)
Q Consensus       412 v~l~-~--~~~~~~~~~lV~Ey~~~gsL~~~--------------l~~--~~-------~~l~~----------------  449 (645)
                      +... |  +.........++.+..+......              ++.  ..       ....+                
T Consensus        79 i~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (316)
T d2ppqa1          79 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV  158 (316)
T ss_dssp             CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred             ceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhc
Confidence            2111 0  12234556677777765433210              000  00       00000                


Q ss_pred             -HHHHHHHHHHHHHHHHHH-hhcCCCeeeccCCCCCeEECCCCcEEEeeccCcc
Q 042831          450 -EFRYKIAQDLASGLLYLQ-EEWEQCVVHRDIKSSNIMLDSNFNAKIGDFGLAR  501 (645)
Q Consensus       450 -~~~~~i~~~ia~gL~yLH-~~~~~~ivH~Dlkp~NILld~~~~~kl~DfGla~  501 (645)
                       ......+..+...+.-.+ .....++||+|+.+.||+++.+...-|.||+.+.
T Consensus       159 ~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         159 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             chhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence             001111112222222211 1235679999999999999988777899999875