BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042838
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C9L5|WAKLH_ARATH Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana
GN=WAKL9 PE=2 SV=1
Length = 792
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 24/126 (19%)
Query: 14 LCQYDCGNATIRYPFGIGEGCYFDKSFEVICDYS-SGSPKAFLASINNLQVLDNHVYGVS 72
LCQ DCG I YPFG+G+GCY +K +E+ C+ S SG +L+ IN V G+S
Sbjct: 30 LCQPDCGGIKIPYPFGMGKGCYLEKWYEITCNTSTSGKLVPYLSVIN------KEVVGIS 83
Query: 73 ------NIRVNIPVIS------LKSSNLTSNAEG----VSLSVSPFTFSPWDNRFTAIGC 116
R N P S + S +SN E ++L+ +PF S N A+GC
Sbjct: 84 LPTEGRGSRYNNPYQSVNIKNPIASKECSSNGEELGSLLNLTGTPFYVSQ-HNELVAVGC 142
Query: 117 NNYTTI 122
NN ++
Sbjct: 143 NNTASL 148
>sp|Q9M092|WAKLM_ARATH Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana
GN=WAKL17 PE=3 SV=2
Length = 786
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 19 CGNATIRYPFGIGEGCYFDKSFEVICDYSSGSPKAFLASINNLQVLDNHVYG---VSNIR 75
CG I YPFGIG+GCY +KS+E+ C +SG FL+ I+ +V+ H+ G ++R
Sbjct: 42 CGGIAIPYPFGIGKGCYLEKSYEIECLNTSGKLVPFLSVISK-EVVSIHLPGRQSFGSVR 100
Query: 76 VNIPVISLK-SSNLTSNAEGVSLSVSPFTFSPWDNRFTAIGCNNYTTI 122
V P+ S SS+ +A ++L+ SPF S +N +GC++ ++
Sbjct: 101 VRSPITSAGCSSDGKDSAPVMNLTDSPFFVSDINN-LVGVGCSSKVSL 147
>sp|Q9LMP1|WAK2_ARATH Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2
PE=1 SV=1
Length = 732
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 12 KDLCQYDCGNATIRYPFGIGEGCYF--DKSFEVICDYSSGSPKAFLASINNLQVLDNHVY 69
+ CQ CGN + YPFG GCY+ D+SF + C+ K F N+ V++ +
Sbjct: 26 RKECQTRCGNVAVEYPFGTSPGCYYPGDESFNLTCNEQE---KLFFG---NMPVINMSLS 79
Query: 70 GVSNIRVNIPVISLKSSNLTSNAEGVSLSVSPFTFSPWDNRFTAIGCNNYTTIIKRQNDS 129
G +R+ + S ++ ++ FT S NRFT +GCN+Y ++
Sbjct: 80 GQLRVRLVRSRVCYDSQGKQTDYIAQRTTLGNFTLSEL-NRFTVVGCNSY-AFLRTSGVE 137
Query: 130 SVFGGCLSISTCDPA 144
GC+SI CD A
Sbjct: 138 KYSTGCISI--CDSA 150
>sp|Q9LMN7|WAK5_ARATH Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5
PE=2 SV=1
Length = 733
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 28/153 (18%)
Query: 8 IKAS-KDLCQYDCGNATIRYPFGIGEGCYF--DKSFEVICDYSSGSPKAFLASINNLQVL 64
+KA +D CQ CG+ I YPFGI GCY+ D SF + C+ P ++N++VL
Sbjct: 21 VKAQPRDDCQTRCGDVPIDYPFGISTGCYYPGDDSFNITCE--EDKPNV----LSNIEVL 74
Query: 65 D-NHVYGVSNIRVNIPVISLKSSNLTSNA-EGVSLSVSPFTFSPWDNRFTAIGCNNYTTI 122
+ NH +R IP ++ T+N E + + +FSP +N+FT +GCN + +
Sbjct: 75 NFNH---SGQLRGLIPRSTVCYDQQTNNDFESLWFRLDNLSFSP-NNKFTLVGCNAWALL 130
Query: 123 IKRQNDSSVFG------GCLSISTCDPALNPGC 149
S FG GC+S+ P N C
Sbjct: 131 -------STFGIQNYSTGCMSLCDTPPPPNSKC 156
>sp|Q9LMT9|WAKLL_ARATH Putative wall-associated receptor kinase-like 13 OS=Arabidopsis
thaliana GN=WAKL13 PE=2 SV=1
Length = 764
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 19/124 (15%)
Query: 15 CQYDCGNATIRYPFGIGE-GCYFDKSFEVICDYSSGSPKA--FLASINNLQVLDNHVYGV 71
C + CG+ I +PFGIGE GCY D+ ++V C S+ S K FL I N++V++ + G
Sbjct: 26 CTHKCGDIQIPFPFGIGEIGCYLDEWYQVECRPSATSGKVFPFLPKI-NMEVVNISLPGT 84
Query: 72 -----------SNIRVNIPVISLKSSNLTSNAEGVSL--SVSPFTFSPWDNRFTAIGCNN 118
S+IRV PV S+ S N G++L + +PF F +N A+GCNN
Sbjct: 85 NDDIFYTYPSFSSIRVKSPVASMGCST-DGNDSGLTLNFTETPFFFGDQNN-LVAVGCNN 142
Query: 119 YTTI 122
++
Sbjct: 143 KASL 146
>sp|Q9SA25|WAKLG_ARATH Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana
GN=WAKL8 PE=2 SV=1
Length = 720
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 15 CQYDCGNATIRYPFGIGEGCYFDKSFEVICDYSSGSPKAFL-----ASINNLQVLDNHVY 69
C CGN ++ YPFGIG+GCY +K FE++C SS L ++ + + D
Sbjct: 33 CSDHCGNVSVPYPFGIGKGCYKNKWFEIVCKSSSDQQPILLLPRIRRAVTSFNLGDPFSI 92
Query: 70 GVSN-IRVNIPVISLKSSNLTS-NAEGVSLSVSPFTFSPWDNRFTAIGCNN 118
V N + P+ N ++ ++L SPF F +N+FTA+GCNN
Sbjct: 93 SVYNKFYIQSPLKHSGCPNRDGYSSSSLNLKGSPF-FISENNKFTAVGCNN 142
>sp|Q9LMN8|WAK3_ARATH Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3
PE=2 SV=2
Length = 741
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 12 KDLCQYDCGNATIRYPFGIGEGCYF--DKSFEVICDYSSGSPKAFLASINNLQVLD-NHV 68
++ C+ CGN TI YPFGI GCY+ D +F + C K L I +QV + +H
Sbjct: 28 REDCKLKCGNVTIEYPFGISTGCYYPGDDNFNLTCVV---EEKLLLFGI--IQVTNISHS 82
Query: 69 YGVSNIRVNIPVISLKSSNLTSNAEGVSLSVSPFTFSPWDNRFTAIGCNNYTTI--IKRQ 126
VS + + + A G L S F+ S +N+FT +GCN + + +Q
Sbjct: 83 GHVSVLFERFSECYEQKNETNGTALGYQLG-SSFSLSS-NNKFTLVGCNALSLLSTFGKQ 140
Query: 127 NDSSVFGGCLSISTCDPALNPGCYDFLCALPQNIT 161
N S+ GCLS+ P N C C ++ +
Sbjct: 141 NYST---GCLSLCNSQPEANGRCNGVGCCTTEDFS 172
>sp|Q0WNY5|WAKLN_ARATH Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana
GN=WAKL18 PE=2 SV=1
Length = 793
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 21/133 (15%)
Query: 11 SKDLCQYDCGNATIRYPFGIGEGCYFDKSFEVICDYSSGSPKAFLASINNLQVL------ 64
S D CQ +CG +I YPFGIG+ C +K +E+ C ++ L S N +V+
Sbjct: 25 SADACQRECGGISIPYPFGIGKDCCLEKYYEIECRNTTSRKLVPLLSFINKEVVSISLPS 84
Query: 65 -DNH-VYGVSN---------IRVNIPVISLKSSNLTSNAEG---VSLSVSPFTFSPWDNR 110
D+H Y VS+ +RV P+ S N + G ++ + SPF F N
Sbjct: 85 ADSHFAYEVSDQERHESFGLVRVKFPITSAGCFNDGKESGGGSKMNFTGSPF-FIDRSNS 143
Query: 111 FTAIGCNNYTTII 123
A GCN+ +++
Sbjct: 144 LIAAGCNSKVSLM 156
>sp|Q9S9M1|WAKLE_ARATH Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana
GN=WAKL5 PE=2 SV=2
Length = 731
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 23/143 (16%)
Query: 9 KASKDLCQYDCGNATIRYPFGI-GEGCYFDKSFEVICDY----SSGSPKAFLASIN---- 59
K S C CG +I +PFGI G+ CY + +EV+C+ SSG+ FL+ IN
Sbjct: 36 KNSSTSCNRTCGGISIPFPFGIGGKDCYLNGWYEVVCNATTSGSSGTTVPFLSRINREVV 95
Query: 60 --NLQVLDNHVYGVSNIRVNIPVISLKSSNLTSNAEGVSL-------SVSPFTFSPWDNR 110
+L +N YGV +I+ PV SL S+ TS SL SP+ F +NR
Sbjct: 96 NISLPEGNNEQYGVVHIKG--PVTSLGCSSNTSQVPQKSLPDLNVTGKGSPY-FITDENR 152
Query: 111 FTAIGCNNYTTIIKRQNDSSVFG 133
A+GC T + +S + G
Sbjct: 153 LVAVGCG--TKALMTDIESEILG 173
>sp|Q9S9M5|WAKLA_ARATH Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana
GN=WAKL1 PE=1 SV=1
Length = 730
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 80/184 (43%), Gaps = 31/184 (16%)
Query: 4 PLWPIKASKDLCQYDCGNATIRYPFGI-GEGCYFDKSFEVICDYSSGSPKAF--LASINN 60
P PI S C CG +I +PFGI G+ CY + +EVIC+ ++ L S+ N
Sbjct: 28 PPPPISNSSTSCNKTCGGISIPFPFGIGGKDCYLNGWYEVICNTTTSDSNTTVPLLSMIN 87
Query: 61 LQVLD------NHVYGVSNIRVNIPVISLKSSNLTSNAEGVSLSV-------SPFTFSPW 107
+V++ N YG+ +++ PV SL S+ TS SL V SP+ F
Sbjct: 88 REVVNISLPDSNEPYGL--VQIKGPVTSLGCSSNTSEGPQNSLPVLNVTGKGSPY-FLTD 144
Query: 108 DNRFTAIGCNNYTTIIKRQNDSSVFG---GCLSISTCDPALNPGCYDFLC-------ALP 157
+NR A+GC + +S + G C + + N C + C P
Sbjct: 145 ENRLVAVGCG--IKALMTDTESEILGCESSCEHRKSGEEVTNLICTGYRCCQARLPVGRP 202
Query: 158 QNIT 161
Q IT
Sbjct: 203 QAIT 206
>sp|Q8VYA3|WAKLJ_ARATH Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana
GN=WAKL10 PE=2 SV=1
Length = 769
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 15 CQYDCGNATIRYPFGIGEGCYFDKSFEVICDYSSGSPKAFLASINN--LQVLDNHVY--- 69
C CG I YPFGIG GCY +K +E+IC +S FL+ IN + + + +Y
Sbjct: 27 CPKTCGGIDIPYPFGIGTGCYLEKWYEIICVNNS---VPFLSIINREVVSISFSDMYRRF 83
Query: 70 ---GVSNIRVNIPVISLKSSNLTSNAEGVSLSVSPFTFSPWDNR-FTAIGCNNYTTI 122
G +IR+ P+ S K + G L+++ + F DN A+GCNN ++
Sbjct: 84 FNVGYGSIRIRNPIAS-KGCSSGGQEFGSLLNMTGYPFYLGDNNMLIAVGCNNTASL 139
>sp|Q39191|WAK1_ARATH Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1
PE=1 SV=2
Length = 735
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 15/139 (10%)
Query: 15 CQYDCGNATIRYPFGIGEGCYF--DKSFEVICDYSSGSPKAFLASINNLQVLDNHVYGVS 72
CQ CGN TI YPFGI GCY+ ++SF + C P +++++V + + G
Sbjct: 32 CQNKCGNITIEYPFGISSGCYYPGNESFSITC--KEDRPHV----LSDIEVANFNHSGQL 85
Query: 73 NIRVNIPVISLKSSNLTSNAEGVSLSVSPFTFSPWDNRFTAIGCNNYTTI--IKRQNDSS 130
+ +N E S ++ + S +N+ TA+GCN + + QN S+
Sbjct: 86 QVLLNRSSTCYDEQG-KKTEEDSSFTLENLSLSA-NNKLTAVGCNALSLLDTFGMQNYST 143
Query: 131 VFGGCLSISTCDPALNPGC 149
CLS+ P + C
Sbjct: 144 A---CLSLCDSPPEADGEC 159
>sp|Q9LN59|WAKLK_ARATH Putative wall-associated receptor kinase-like 11 OS=Arabidopsis
thaliana GN=WAKL11 PE=3 SV=2
Length = 788
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 19 CGNATIRYPFGIGEGCYFDKSFEVICDYSSGSP---KAFLASIN-NLQVLDNHVYGVS-- 72
CGN I YPFGI +GCY ++ +++ C ++ P K +A +N +L D + VS
Sbjct: 38 CGNINIPYPFGIEKGCYLNEWYKIECKNAT-YPFLFKMGMAVVNISLPGDDGYNNPVSYG 96
Query: 73 NIRVNIPVISLKSSNLTSNAEGV-SLSVSPFTFSPWDNRFTAIGCNNYTTI 122
+IRV IP+ S+ S + V + + SPF F N A+GCN+ ++
Sbjct: 97 SIRVKIPITSIGCSRDGKESGSVLNFTDSPFYFG-IGNSLVAVGCNSKASL 146
>sp|Q9S9M2|WAKLD_ARATH Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana
GN=WAKL4 PE=2 SV=2
Length = 761
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Query: 14 LCQYDCGNATIRYPFGI-GEGCYFDKSFEVICDYSSGSPKAFLASIN----NLQVLD-NH 67
LC CG +I +PFGI G+ CY + +EV+C+ ++ P FL+ IN N+ + D
Sbjct: 32 LCNRVCGGISIPFPFGIGGKECYLNPWYEVVCNTTTSVP--FLSRINRELVNIYLPDPTE 89
Query: 68 VYGVSNIRVNIPVISL-----KSSNLTSNAEGVSLSVSPFTFSPWDNRFTAIGCN 117
Y + + PV S S LT V+ SP+ F N A+GCN
Sbjct: 90 YYSNGVVHIKGPVTSSGCSTGTSQPLTPQPLNVAGQGSPY-FLTDKNLLMAVGCN 143
>sp|Q7X8C5|WAKLB_ARATH Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana
GN=WAKL2 PE=2 SV=1
Length = 748
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 12/111 (10%)
Query: 13 DLCQYDCGNATIRYPFGI-GEGCYFDKSFEVICDYSSGSPKAFLASINNLQVLDNHVYGV 71
D C CG +I +PFGI G+ CY + +EV+C+ ++ P FL+ IN ++++ + GV
Sbjct: 33 DRCNRVCGEISIPFPFGIGGKDCYLNPWYEVVCNSTNSVP--FLSRINR-ELVNISLNGV 89
Query: 72 SNIRVNIPVISL-----KSSNLTSNAEGVSLSVSPFTFSPWDNRFTAIGCN 117
+I+ PV S S LT V+ SP+ F N A+GC
Sbjct: 90 VHIKA--PVTSSGCSTGTSQPLTPPPLNVAGQGSPY-FLTDKNLLVAVGCK 137
>sp|Q8GXQ3|WAKLF_ARATH Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana
GN=WAKL6 PE=2 SV=2
Length = 642
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 4 PLWPIKASKDLCQYDCGNATIRYPFGIGEGCYFDKSFEVICDYSSGSPKA----FLASIN 59
P P S C CG +I +PFGIG+ CY + +EVIC+ S+ FL+ IN
Sbjct: 31 PPPPNSNSSTSCNRACGGVSIPFPFGIGKDCYLNGWYEVICNTSTSGSSGTTVPFLSRIN 90
Query: 60 ----NLQVLD-NHVYGVSNIR 75
N+ + D +YGV +I+
Sbjct: 91 SEVVNISLPDGKKLYGVVHIK 111
>sp|Q8RY17|WAKLI_ARATH Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana
GN=WAKL22 PE=2 SV=1
Length = 751
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 19/139 (13%)
Query: 15 CQYDCGNATIRYPFGIG-EGCYFDKSFEVICD--YSSGSPKAFLASINN------LQVLD 65
C CG I +PFGIG C+ + +EV+C+ S S FL IN L+
Sbjct: 37 CNRICGGIEIPFPFGIGRRDCFLNDWYEVVCNSTTSGKSLAPFLYKINRELVSITLRSSI 96
Query: 66 NHVYGVSNIRVNIPVISLKSSNLTSNAEGVSLS--VSPFTFSPWDNRFTAIGCNNYTTII 123
+ YGV +I+ PV S S ++L+ SPF F NR ++GC+N I
Sbjct: 97 DSSYGVVHIKS--PVTSSGCSQRPVKPLPLNLTGKGSPF-FITDSNRLVSVGCDNRALIT 153
Query: 124 KRQNDSSVFGGCLSISTCD 142
+ S GC S+CD
Sbjct: 154 DIE---SQITGCE--SSCD 167
>sp|Q9S9M3|WAKLC_ARATH Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana
GN=WAKL3 PE=2 SV=2
Length = 730
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 25/138 (18%)
Query: 15 CQYDCGNATIRYPFGI-GEGCYFDKSFEVICD-YSSGSPKA--FLASINNLQVLDNHV-- 68
C G +I +PFGI G+ CY + +EV+C+ +SGS K FL IN +V++ +
Sbjct: 37 CNRTFGGISIPFPFGIGGKDCYLNSWYEVVCNSTTSGSCKTVPFLTRINR-EVVNISLPK 95
Query: 69 ------YGVSNIRVNIPVISLK-SSNLTSNAE------GVSLSVSPFTFSPWDNRFTAIG 115
YGV +I+ PV SL SSN++ + ++ SP+ F +NR A+G
Sbjct: 96 SDFFSPYGVVHIKG--PVTSLGCSSNISQGLQKTLPDLNITGRGSPY-FLTDENRLVAVG 152
Query: 116 CNNYTTIIKRQNDSSVFG 133
C T + +S + G
Sbjct: 153 CG--TKALMTDIESEILG 168
>sp|Q9LMN6|WAK4_ARATH Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4
PE=2 SV=1
Length = 738
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 56/134 (41%), Gaps = 21/134 (15%)
Query: 15 CQYDCGNATIRYPFGIGEGCYF--DKSFEVICD----YSSGSPKAFLASINNLQVLDNHV 68
C CGN T+ YPFG GC+ D SF + C + G ++ + L+VL
Sbjct: 28 CPEKCGNVTLEYPFGFSPGCWRAEDPSFNLSCVNENLFYKGLEVVEISHSSQLRVL---- 83
Query: 69 YGVSNIRVNIPVISLKSSNLTSNAEGVSLSVSPFTFSPWDNRFTAIGCNNYTTIIKRQND 128
Y S I N K + SN ++LS +N TA+GCN+Y +
Sbjct: 84 YPASYICYNSKGKFAKGTYYWSNLGNLTLS--------GNNTITALGCNSYAFVSSNGTR 135
Query: 129 SSVFGGCLSISTCD 142
+ G IS CD
Sbjct: 136 RNSVG---CISACD 146
>sp|Q55FN7|ODBB_DICDI 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial
OS=Dictyostelium discoideum GN=bkdB PE=3 SV=1
Length = 370
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 16 QYDCGNATIRYPFG-IGEGCYFDKSFEVICDYSSGSPKAFLASINNLQVL 64
Q+DCG+ TIR P+G +G G + Y S SP+++ L+V+
Sbjct: 152 QFDCGSLTIRSPYGAVGHGGH----------YHSQSPESYFGHTPGLKVV 191
>sp|A5D2Z6|DXS_PELTS 1-deoxy-D-xylulose-5-phosphate synthase OS=Pelotomaculum
thermopropionicum (strain DSM 13744 / JCM 10971 / SI)
GN=dxs PE=3 SV=1
Length = 637
Score = 31.6 bits (70), Expect = 2.0, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 20 GNATIRYPFGIGEGCYFDKSFEVI 43
G A +RYP G GC D SF++I
Sbjct: 465 GPAAVRYPRSAGTGCRMDDSFKII 488
>sp|B2UWS9|Y2534_CLOBA UPF0371 protein CLH_2534 OS=Clostridium botulinum (strain Alaska
E43 / Type E3) GN=CLH_2534 PE=3 SV=1
Length = 502
Score = 30.4 bits (67), Expect = 4.4, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 12/110 (10%)
Query: 45 DYSSGSPKAFLASINNLQVLDNHVYGVSNIRVNIPVISLKSS-----NLTSNAEGV--SL 97
D G+ + +I L + + +Y +S + + P+++LKS N++ N E V +L
Sbjct: 383 DLMDGAAAVIINAIKYLANISDDIYLISPVILE-PIMNLKSKTFNEKNISLNCEEVLTAL 441
Query: 98 SVSPFTFSPWDNRFTAI----GCNNYTTIIKRQNDSSVFGGCLSISTCDP 143
S+S T + GC + T I + D + G TCDP
Sbjct: 442 SISAATNPTAQVAMEKLPLLRGCQAHATTILSRADDTTLGKLGVDVTCDP 491
>sp|B2TP27|Y2797_CLOBB UPF0371 protein CLL_A2797 OS=Clostridium botulinum (strain Eklund
17B / Type B) GN=CLL_A2797 PE=3 SV=1
Length = 502
Score = 30.4 bits (67), Expect = 5.5, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 12/110 (10%)
Query: 45 DYSSGSPKAFLASINNLQVLDNHVYGVSNIRVNIPVISLKSS-----NLTSNAEGV--SL 97
D G+ + +I L + + +Y +S + + P+++LKS N++ N E V +L
Sbjct: 383 DLMDGAAAVIINAIKYLANISDDIYLISPVILE-PIMNLKSKTFNEKNISLNCEEVLTAL 441
Query: 98 SVSPFTFSPWDNRFTAI----GCNNYTTIIKRQNDSSVFGGCLSISTCDP 143
S+S T + GC + T I + D + G TCDP
Sbjct: 442 SISAATNPTAQVAMEKLPLLRGCQAHATTILSRADDTTLGKLGIDVTCDP 491
>sp|Q04641|MXID_SHIFL Outer membrane protein MxiD OS=Shigella flexneri GN=mxiD PE=1 SV=1
Length = 566
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 16/92 (17%)
Query: 6 WPIKASKDLCQYDCGNATIRYPFGIGEGCYFDKSFEVICDYSSGSPKAFLASINNLQVLD 65
+ I+ KD YD RYP G DK+F Y SG P N +LD
Sbjct: 124 YLIQYLKDANLYDH-----RYPI---RGNISDKTF-----YISGPPALVELVANTATLLD 170
Query: 66 NHVYGVSNIRVNIPVISLKS---SNLTSNAEG 94
V + +VN VI LK+ S+ T N G
Sbjct: 171 KQVSSIGTDKVNFGVIKLKNTFVSDRTYNMRG 202
>sp|Q55293|MXID_SHISO Outer membrane protein MxiD OS=Shigella sonnei GN=mxiD PE=3 SV=1
Length = 566
Score = 30.0 bits (66), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 16/92 (17%)
Query: 6 WPIKASKDLCQYDCGNATIRYPFGIGEGCYFDKSFEVICDYSSGSPKAFLASINNLQVLD 65
+ I+ KD YD RYP G DK+F Y SG P N +LD
Sbjct: 124 YLIQYLKDANLYDH-----RYPI---RGNISDKTF-----YISGPPALVELVANTATLLD 170
Query: 66 NHVYGVSNIRVNIPVISLKS---SNLTSNAEG 94
V + +VN VI LK+ S+ T N G
Sbjct: 171 KQVSSIGTDKVNFGVIKLKNTFVSDRTYNMRG 202
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,960,544
Number of Sequences: 539616
Number of extensions: 2315636
Number of successful extensions: 4291
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 4260
Number of HSP's gapped (non-prelim): 29
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)