Query 042842
Match_columns 375
No_of_seqs 179 out of 1429
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 10:06:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042842.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042842hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 6E-101 1E-105 745.9 29.1 354 3-371 39-453 (454)
2 PF00450 Peptidase_S10: Serine 100.0 2.7E-94 5.8E-99 712.0 19.8 350 4-365 7-415 (415)
3 PLN02209 serine carboxypeptida 100.0 3.8E-92 8.3E-97 691.2 32.4 351 4-368 35-437 (437)
4 PTZ00472 serine carboxypeptida 100.0 6.1E-92 1.3E-96 697.8 33.6 355 3-369 42-462 (462)
5 PLN03016 sinapoylglucose-malat 100.0 6.7E-91 1.5E-95 682.5 31.5 351 4-368 33-433 (433)
6 PLN02213 sinapoylglucose-malat 100.0 1.2E-66 2.6E-71 495.9 22.9 269 90-368 1-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 2.5E-67 5.3E-72 505.0 17.9 351 6-372 74-497 (498)
8 KOG1283 Serine carboxypeptidas 100.0 4.5E-66 9.8E-71 465.2 15.5 338 9-364 4-412 (414)
9 TIGR01250 pro_imino_pep_2 prol 98.8 2.4E-08 5.2E-13 92.1 10.3 129 9-188 3-132 (288)
10 PRK10673 acyl-CoA esterase; Pr 98.7 1.9E-07 4E-12 85.6 12.4 102 37-185 13-114 (255)
11 TIGR03611 RutD pyrimidine util 98.6 1.8E-06 3.8E-11 78.4 16.4 107 38-189 11-117 (257)
12 PRK03204 haloalkane dehalogena 98.6 5.6E-06 1.2E-10 77.8 18.8 129 2-187 7-136 (286)
13 PRK00870 haloalkane dehalogena 98.4 8.1E-06 1.7E-10 77.2 15.2 130 7-186 18-149 (302)
14 TIGR03056 bchO_mg_che_rel puta 98.3 1.9E-05 4.1E-10 72.9 15.4 107 38-189 26-132 (278)
15 TIGR03695 menH_SHCHC 2-succiny 98.2 3.2E-06 6.9E-11 75.7 7.4 105 40-187 1-105 (251)
16 TIGR03343 biphenyl_bphD 2-hydr 98.2 5.2E-05 1.1E-09 70.5 14.8 33 332-364 249-281 (282)
17 TIGR02427 protocat_pcaD 3-oxoa 98.1 9.4E-05 2E-09 66.3 13.9 103 38-186 11-113 (251)
18 PRK10349 carboxylesterase BioH 98.0 0.00013 2.9E-09 66.9 13.9 95 40-185 13-107 (256)
19 PLN02679 hydrolase, alpha/beta 98.0 0.0005 1.1E-08 66.9 18.1 104 39-186 87-190 (360)
20 PF10340 DUF2424: Protein of u 97.9 1.2E-05 2.6E-10 77.3 5.4 135 22-191 105-239 (374)
21 PHA02857 monoglyceride lipase; 97.9 9.1E-05 2E-09 68.8 10.2 124 20-189 10-134 (276)
22 TIGR01249 pro_imino_pep_1 prol 97.9 7E-05 1.5E-09 71.1 9.3 127 9-188 5-131 (306)
23 TIGR01738 bioH putative pimelo 97.8 0.00018 4E-09 64.2 11.4 32 332-363 214-245 (245)
24 PLN02824 hydrolase, alpha/beta 97.8 0.00014 3E-09 68.4 9.6 124 10-187 10-137 (294)
25 PLN02385 hydrolase; alpha/beta 97.7 0.00017 3.8E-09 69.7 9.9 126 20-188 71-198 (349)
26 PLN02298 hydrolase, alpha/beta 97.7 0.00016 3.4E-09 69.3 9.2 139 7-188 31-170 (330)
27 PRK14875 acetoin dehydrogenase 97.6 0.00066 1.4E-08 65.8 11.3 103 38-186 129-231 (371)
28 PLN02980 2-oxoglutarate decarb 97.6 0.0032 7E-08 72.6 18.3 106 38-186 1369-1479(1655)
29 PRK11126 2-succinyl-6-hydroxy- 97.5 0.00019 4.2E-09 65.0 6.0 100 40-186 2-101 (242)
30 PF12697 Abhydrolase_6: Alpha/ 97.4 8.3E-05 1.8E-09 65.4 2.9 104 43-190 1-104 (228)
31 TIGR02240 PHA_depoly_arom poly 97.4 0.00096 2.1E-08 62.1 10.2 117 20-188 11-127 (276)
32 COG1506 DAP2 Dipeptidyl aminop 97.3 0.00032 6.9E-09 73.2 5.6 132 20-191 375-511 (620)
33 PRK03592 haloalkane dehalogena 97.3 0.00094 2E-08 62.7 8.3 104 40-189 27-130 (295)
34 PLN02652 hydrolase; alpha/beta 97.3 0.0011 2.4E-08 65.3 8.6 127 20-188 120-246 (395)
35 PRK10749 lysophospholipase L2; 97.2 0.0013 2.8E-08 63.1 8.7 133 10-188 32-167 (330)
36 PLN02894 hydrolase, alpha/beta 97.2 0.0029 6.4E-08 62.5 11.2 109 38-187 103-211 (402)
37 PRK05077 frsA fermentation/res 97.2 0.00083 1.8E-08 66.7 7.2 79 91-188 223-301 (414)
38 KOG4178 Soluble epoxide hydrol 97.2 0.0043 9.2E-08 58.4 11.3 136 9-192 23-158 (322)
39 KOG2564 Predicted acetyltransf 97.0 0.023 5.1E-07 52.3 13.6 91 38-159 72-164 (343)
40 KOG4409 Predicted hydrolase/ac 96.9 0.0032 7E-08 59.6 7.9 85 88-190 114-198 (365)
41 PLN03084 alpha/beta hydrolase 96.9 0.0072 1.6E-07 59.3 10.7 107 38-187 125-232 (383)
42 KOG2382 Predicted alpha/beta h 96.9 0.012 2.5E-07 55.5 11.1 33 332-364 279-311 (315)
43 PRK06489 hypothetical protein; 96.8 0.0056 1.2E-07 59.5 9.1 133 20-186 49-188 (360)
44 PLN02578 hydrolase 96.8 0.0048 1E-07 59.9 8.1 75 90-186 112-186 (354)
45 KOG1455 Lysophospholipase [Lip 96.7 0.02 4.4E-07 53.3 11.4 123 20-187 37-164 (313)
46 PLN02211 methyl indole-3-aceta 96.7 0.0069 1.5E-07 56.5 8.2 106 38-186 16-121 (273)
47 KOG1454 Predicted hydrolase/ac 96.7 0.0097 2.1E-07 57.1 9.2 36 330-365 288-323 (326)
48 PLN03087 BODYGUARD 1 domain co 96.6 0.013 2.8E-07 59.1 10.1 129 11-185 179-307 (481)
49 KOG1515 Arylacetamide deacetyl 96.6 0.0079 1.7E-07 57.7 8.2 140 19-191 70-211 (336)
50 TIGR02821 fghA_ester_D S-formy 96.6 0.022 4.7E-07 53.2 10.8 53 126-190 123-176 (275)
51 TIGR03101 hydr2_PEP hydrolase, 96.5 0.011 2.3E-07 55.1 8.2 128 20-193 9-140 (266)
52 PRK08775 homoserine O-acetyltr 96.5 0.012 2.5E-07 56.8 8.6 76 89-187 98-173 (343)
53 PLN02965 Probable pheophorbida 96.4 0.0057 1.2E-07 56.2 5.3 75 91-186 31-106 (255)
54 PLN02442 S-formylglutathione h 96.3 0.038 8.2E-07 51.9 10.8 56 121-190 126-181 (283)
55 COG0596 MhpC Predicted hydrola 96.3 0.015 3.2E-07 51.4 7.4 104 40-188 21-124 (282)
56 COG2267 PldB Lysophospholipase 96.2 0.037 8.1E-07 52.4 10.3 136 10-191 11-146 (298)
57 PRK07581 hypothetical protein; 96.2 0.018 4E-07 55.2 8.4 32 333-364 302-334 (339)
58 PRK00175 metX homoserine O-ace 96.2 0.035 7.7E-07 54.4 10.3 137 20-187 32-182 (379)
59 TIGR01840 esterase_phb esteras 96.1 0.019 4.1E-07 51.3 7.4 53 123-187 78-130 (212)
60 cd00707 Pancreat_lipase_like P 96.0 0.0053 1.2E-07 57.5 3.1 81 90-186 66-146 (275)
61 PRK05855 short chain dehydroge 95.9 0.021 4.6E-07 58.7 7.4 97 20-155 12-108 (582)
62 PLN02511 hydrolase 95.7 0.056 1.2E-06 53.2 9.1 116 11-160 74-192 (388)
63 TIGR03100 hydr1_PEP hydrolase, 95.5 0.096 2.1E-06 48.8 9.6 78 91-188 58-135 (274)
64 PRK10985 putative hydrolase; P 95.5 0.17 3.7E-06 48.3 11.4 20 332-351 281-300 (324)
65 PF00326 Peptidase_S9: Prolyl 95.4 0.015 3.3E-07 51.8 3.9 94 89-194 13-106 (213)
66 PRK10566 esterase; Provisional 95.4 0.074 1.6E-06 48.3 8.5 97 38-160 25-126 (249)
67 TIGR00976 /NonD putative hydro 95.4 0.032 6.8E-07 57.6 6.5 129 20-190 6-135 (550)
68 TIGR01607 PST-A Plasmodium sub 95.4 0.038 8.3E-07 53.1 6.6 95 90-188 74-186 (332)
69 COG3509 LpqC Poly(3-hydroxybut 95.3 0.13 2.7E-06 48.0 9.2 146 20-208 44-202 (312)
70 PF00561 Abhydrolase_1: alpha/ 95.3 0.013 2.8E-07 51.9 2.8 77 92-186 2-78 (230)
71 PRK10162 acetyl esterase; Prov 95.1 0.048 1E-06 52.1 6.4 45 140-189 153-197 (318)
72 TIGR03230 lipo_lipase lipoprot 95.1 0.09 1.9E-06 52.3 8.3 67 90-161 73-139 (442)
73 PRK10115 protease 2; Provision 94.8 0.037 8.1E-07 58.5 5.0 137 20-193 426-565 (686)
74 KOG2100 Dipeptidyl aminopeptid 94.2 0.05 1.1E-06 58.0 4.4 138 20-190 507-647 (755)
75 KOG1838 Alpha/beta hydrolase [ 94.0 0.25 5.3E-06 48.3 8.2 134 11-187 96-236 (409)
76 PF00975 Thioesterase: Thioest 93.8 0.17 3.7E-06 45.3 6.6 77 91-187 28-104 (229)
77 TIGR01392 homoserO_Ac_trn homo 93.2 0.73 1.6E-05 44.5 10.3 29 336-364 322-351 (351)
78 PLN00021 chlorophyllase 92.7 0.24 5.2E-06 47.3 5.8 62 121-188 102-167 (313)
79 PF10230 DUF2305: Uncharacteri 92.0 0.86 1.9E-05 42.4 8.5 118 40-189 2-124 (266)
80 PRK11460 putative hydrolase; P 91.8 0.53 1.2E-05 42.7 6.9 37 123-160 86-122 (232)
81 PF06500 DUF1100: Alpha/beta h 91.7 0.059 1.3E-06 52.8 0.5 79 91-188 219-297 (411)
82 PLN02454 triacylglycerol lipas 91.6 0.42 9.1E-06 47.0 6.2 69 116-188 204-272 (414)
83 COG0657 Aes Esterase/lipase [L 91.1 1.7 3.7E-05 41.1 9.8 46 139-191 150-195 (312)
84 PF10503 Esterase_phd: Esteras 90.1 2.1 4.4E-05 38.7 8.8 40 137-187 93-132 (220)
85 PLN02872 triacylglycerol lipas 89.5 2 4.3E-05 42.4 8.9 97 38-156 72-175 (395)
86 PRK11126 2-succinyl-6-hydroxy- 89.4 0.33 7.2E-06 43.6 3.2 31 334-364 210-240 (242)
87 COG4099 Predicted peptidase [G 89.4 3.2 6.9E-05 39.0 9.4 37 126-162 254-290 (387)
88 cd00312 Esterase_lipase Estera 89.3 0.86 1.9E-05 46.1 6.5 36 123-159 159-194 (493)
89 PRK11071 esterase YqiA; Provis 89.1 0.38 8.3E-06 42.2 3.2 34 125-161 48-81 (190)
90 PF01764 Lipase_3: Lipase (cla 89.0 0.62 1.3E-05 38.2 4.3 62 119-187 45-106 (140)
91 PLN03084 alpha/beta hydrolase 88.2 0.47 1E-05 46.6 3.6 31 334-364 352-382 (383)
92 PF07859 Abhydrolase_3: alpha/ 88.1 0.81 1.7E-05 40.3 4.7 63 119-189 47-112 (211)
93 PF05577 Peptidase_S28: Serine 87.7 1.1 2.5E-05 44.6 6.1 94 116-220 88-182 (434)
94 PF05728 UPF0227: Uncharacteri 87.4 0.88 1.9E-05 40.0 4.4 54 126-196 47-100 (187)
95 PF12695 Abhydrolase_5: Alpha/ 86.9 0.54 1.2E-05 38.4 2.7 37 139-187 59-95 (145)
96 KOG2281 Dipeptidyl aminopeptid 86.8 2.9 6.3E-05 43.1 8.1 114 38-191 640-766 (867)
97 PLN02571 triacylglycerol lipas 86.7 1.8 4E-05 42.6 6.6 70 118-188 204-276 (413)
98 PRK05371 x-prolyl-dipeptidyl a 86.6 1.3 2.8E-05 47.6 6.0 84 89-189 278-375 (767)
99 PLN02824 hydrolase, alpha/beta 86.6 0.61 1.3E-05 43.5 3.2 33 333-365 261-293 (294)
100 COG0400 Predicted esterase [Ge 86.5 4.6 0.0001 36.0 8.6 80 99-190 58-137 (207)
101 cd00741 Lipase Lipase. Lipase 86.2 1.1 2.4E-05 37.6 4.3 43 120-165 10-52 (153)
102 PF02230 Abhydrolase_2: Phosph 85.9 1.1 2.3E-05 40.0 4.3 58 120-190 86-143 (216)
103 cd00519 Lipase_3 Lipase (class 85.3 1.8 3.9E-05 39.0 5.5 57 122-187 112-168 (229)
104 KOG4627 Kynurenine formamidase 84.8 0.55 1.2E-05 41.5 1.8 64 114-189 111-174 (270)
105 KOG4391 Predicted alpha/beta h 84.2 1 2.2E-05 40.3 3.1 79 90-188 106-185 (300)
106 PLN02965 Probable pheophorbida 84.1 0.74 1.6E-05 42.0 2.4 31 334-364 221-251 (255)
107 PRK08775 homoserine O-acetyltr 83.5 0.78 1.7E-05 44.1 2.4 32 334-365 306-338 (343)
108 PF02129 Peptidase_S15: X-Pro 83.3 0.61 1.3E-05 43.3 1.6 82 92-191 59-140 (272)
109 PRK03592 haloalkane dehalogena 83.2 0.75 1.6E-05 42.9 2.2 35 333-367 256-290 (295)
110 PF11288 DUF3089: Protein of u 82.7 1.8 3.9E-05 38.6 4.2 45 119-165 75-119 (207)
111 PF10081 Abhydrolase_9: Alpha/ 82.3 2.3 5E-05 39.6 4.8 40 117-156 85-124 (289)
112 PLN02894 hydrolase, alpha/beta 81.4 1.1 2.5E-05 44.2 2.7 32 334-365 353-384 (402)
113 TIGR01392 homoserO_Ac_trn homo 80.8 1.4 3E-05 42.6 3.0 134 20-187 15-162 (351)
114 KOG3101 Esterase D [General fu 80.7 19 0.0004 32.3 9.6 185 5-215 6-203 (283)
115 PRK07581 hypothetical protein; 80.1 1.8 3.9E-05 41.4 3.6 129 20-187 25-159 (339)
116 PF06057 VirJ: Bacterial virul 79.1 3.8 8.2E-05 36.0 4.9 64 115-188 45-108 (192)
117 PRK06765 homoserine O-acetyltr 79.0 14 0.00031 36.3 9.5 32 334-365 355-387 (389)
118 PF11144 DUF2920: Protein of u 79.0 3.3 7.2E-05 40.6 4.9 62 119-191 161-223 (403)
119 PF05990 DUF900: Alpha/beta hy 78.8 4.1 8.8E-05 37.1 5.3 68 119-191 74-141 (233)
120 PRK13604 luxD acyl transferase 78.7 11 0.00024 35.8 8.3 124 20-188 19-142 (307)
121 PF03283 PAE: Pectinacetyleste 78.4 15 0.00033 35.7 9.4 138 20-166 34-181 (361)
122 PLN02733 phosphatidylcholine-s 78.4 4.9 0.00011 40.2 6.1 40 118-160 142-181 (440)
123 KOG3975 Uncharacterized conser 78.3 3.4 7.4E-05 37.8 4.4 42 116-166 90-131 (301)
124 PLN02753 triacylglycerol lipas 78.0 6.1 0.00013 40.1 6.5 72 116-187 285-359 (531)
125 PRK00175 metX homoserine O-ace 77.9 2 4.3E-05 42.0 3.2 31 335-365 342-373 (379)
126 PF00151 Lipase: Lipase; Inte 77.8 0.47 1E-05 45.6 -1.3 70 90-164 104-173 (331)
127 PLN02719 triacylglycerol lipas 77.6 5.6 0.00012 40.2 6.1 71 117-187 272-345 (518)
128 PLN02324 triacylglycerol lipas 77.6 6.4 0.00014 38.8 6.5 49 116-165 191-239 (415)
129 TIGR02240 PHA_depoly_arom poly 77.4 2.1 4.5E-05 39.5 3.0 33 332-365 233-265 (276)
130 PLN02578 hydrolase 77.4 2.6 5.7E-05 40.7 3.8 32 333-365 323-354 (354)
131 COG0627 Predicted esterase [Ge 77.2 5.1 0.00011 38.2 5.6 132 39-190 52-190 (316)
132 COG2272 PnbA Carboxylesterase 76.8 6.9 0.00015 39.3 6.5 33 125-158 165-197 (491)
133 PRK04940 hypothetical protein; 76.2 5.6 0.00012 34.6 5.1 42 141-196 60-101 (180)
134 PF08538 DUF1749: Protein of u 74.9 18 0.00038 34.3 8.4 99 116-232 82-181 (303)
135 PRK10439 enterobactin/ferric e 74.1 18 0.0004 35.8 8.9 35 141-186 288-322 (411)
136 PF07819 PGAP1: PGAP1-like pro 74.0 8.8 0.00019 34.6 6.1 65 119-191 61-128 (225)
137 PRK06765 homoserine O-acetyltr 72.8 3.9 8.5E-05 40.2 3.7 53 116-186 142-195 (389)
138 PLN02408 phospholipase A1 70.9 8.3 0.00018 37.5 5.3 46 119-165 179-224 (365)
139 PF08237 PE-PPE: PE-PPE domain 70.6 12 0.00026 33.8 6.1 87 92-187 4-90 (225)
140 PLN02761 lipase class 3 family 70.4 11 0.00023 38.3 6.1 71 117-187 267-342 (527)
141 PRK10252 entF enterobactin syn 70.3 22 0.00047 40.6 9.5 90 40-165 1068-1157(1296)
142 smart00824 PKS_TE Thioesterase 69.9 18 0.00038 31.0 7.0 75 91-185 26-100 (212)
143 TIGR03502 lipase_Pla1_cef extr 68.4 18 0.00039 38.9 7.7 45 116-161 521-575 (792)
144 PLN00413 triacylglycerol lipas 67.6 6.3 0.00014 39.5 3.9 40 122-164 268-307 (479)
145 PF05057 DUF676: Putative seri 67.2 8.9 0.00019 34.3 4.5 50 116-166 54-103 (217)
146 COG4757 Predicted alpha/beta h 66.6 9.9 0.00021 34.5 4.5 65 92-160 59-124 (281)
147 PLN02934 triacylglycerol lipas 66.5 8.8 0.00019 38.8 4.6 43 120-165 303-345 (515)
148 PRK14567 triosephosphate isome 66.4 15 0.00032 33.9 5.8 61 118-190 178-238 (253)
149 PLN02802 triacylglycerol lipas 66.0 11 0.00024 38.1 5.2 47 119-166 309-355 (509)
150 PLN02385 hydrolase; alpha/beta 65.3 6.1 0.00013 38.0 3.3 33 334-366 309-345 (349)
151 PRK14566 triosephosphate isome 64.6 16 0.00034 33.9 5.6 60 119-190 189-248 (260)
152 COG3208 GrsT Predicted thioest 64.5 9.4 0.0002 34.8 4.0 63 93-165 36-98 (244)
153 PLN02310 triacylglycerol lipas 64.0 13 0.00029 36.5 5.3 64 118-187 185-249 (405)
154 TIGR01836 PHA_synth_III_C poly 63.4 9.8 0.00021 36.6 4.3 77 92-189 96-173 (350)
155 PLN02162 triacylglycerol lipas 63.0 8.6 0.00019 38.5 3.8 41 122-165 262-302 (475)
156 PF11187 DUF2974: Protein of u 62.1 14 0.00031 33.3 4.8 38 124-165 71-108 (224)
157 PF06414 Zeta_toxin: Zeta toxi 61.7 6.9 0.00015 34.4 2.7 34 37-70 11-50 (199)
158 COG3319 Thioesterase domains o 60.2 75 0.0016 29.4 9.3 61 114-188 44-104 (257)
159 PF12697 Abhydrolase_6: Alpha/ 60.0 4.1 9E-05 35.0 1.0 26 332-357 202-227 (228)
160 PLN02847 triacylglycerol lipas 59.9 15 0.00033 37.9 5.0 64 117-189 226-294 (633)
161 PRK06489 hypothetical protein; 59.8 9.4 0.0002 36.9 3.5 33 332-365 320-356 (360)
162 PLN03037 lipase class 3 family 59.2 16 0.00036 37.0 5.1 48 119-166 295-343 (525)
163 PF05677 DUF818: Chlamydia CHL 59.0 20 0.00044 34.4 5.4 60 89-156 170-230 (365)
164 KOG3079 Uridylate kinase/adeny 58.5 5.5 0.00012 34.8 1.4 15 38-52 5-19 (195)
165 PHA02857 monoglyceride lipase; 57.8 10 0.00022 34.8 3.2 32 334-365 238-272 (276)
166 KOG2183 Prolylcarboxypeptidase 56.2 15 0.00031 36.3 3.9 64 91-157 112-183 (492)
167 KOG1552 Predicted alpha/beta h 55.6 30 0.00065 31.8 5.7 77 91-190 89-166 (258)
168 PF00681 Plectin: Plectin repe 54.9 11 0.00024 24.6 2.1 33 184-216 11-43 (45)
169 KOG4409 Predicted hydrolase/ac 54.4 12 0.00026 36.0 3.1 31 334-364 332-362 (365)
170 PLN02429 triosephosphate isome 53.9 28 0.00062 33.1 5.5 60 119-190 239-299 (315)
171 PF07389 DUF1500: Protein of u 53.5 9.1 0.0002 28.8 1.7 36 122-165 7-42 (100)
172 PF03096 Ndr: Ndr family; Int 53.4 5.5 0.00012 37.2 0.6 36 334-369 247-282 (283)
173 KOG4569 Predicted lipase [Lipi 53.1 23 0.0005 34.1 4.9 41 123-166 156-196 (336)
174 PLN02561 triosephosphate isome 52.9 28 0.00061 32.1 5.2 59 119-189 180-239 (253)
175 PLN03087 BODYGUARD 1 domain co 52.3 14 0.0003 37.5 3.3 33 332-364 444-477 (481)
176 KOG2182 Hydrolytic enzymes of 50.5 1.2E+02 0.0025 30.8 9.3 43 116-158 147-189 (514)
177 TIGR03100 hydr1_PEP hydrolase, 48.3 15 0.00033 34.0 2.7 32 333-364 241-273 (274)
178 PF05448 AXE1: Acetyl xylan es 47.9 48 0.001 31.6 6.2 140 20-188 66-210 (320)
179 cd00311 TIM Triosephosphate is 47.8 48 0.001 30.4 5.8 59 119-190 176-235 (242)
180 TIGR01838 PHA_synth_I poly(R)- 47.3 70 0.0015 33.0 7.5 84 91-190 221-305 (532)
181 PF06259 Abhydrolase_8: Alpha/ 47.1 29 0.00064 30.1 4.1 66 89-161 62-129 (177)
182 KOG3724 Negative regulator of 45.0 29 0.00063 37.0 4.3 43 116-158 151-199 (973)
183 PRK14731 coaE dephospho-CoA ki 44.4 26 0.00057 31.0 3.6 32 39-70 3-36 (208)
184 PF08840 BAAT_C: BAAT / Acyl-C 44.2 17 0.00038 32.4 2.4 47 128-186 9-55 (213)
185 PRK00042 tpiA triosephosphate 43.3 64 0.0014 29.7 5.9 59 119-190 180-239 (250)
186 PRK06762 hypothetical protein; 42.2 20 0.00042 30.2 2.3 21 41-61 2-24 (166)
187 COG0596 MhpC Predicted hydrola 42.0 28 0.0006 30.0 3.4 30 334-363 250-279 (282)
188 PLN02298 hydrolase, alpha/beta 40.1 28 0.0006 32.9 3.3 32 334-365 281-316 (330)
189 PF02450 LCAT: Lecithin:choles 39.4 25 0.00055 34.5 2.9 41 123-163 101-141 (389)
190 COG4425 Predicted membrane pro 38.8 44 0.00095 33.4 4.2 36 118-153 374-409 (588)
191 PRK10749 lysophospholipase L2; 38.6 30 0.00064 32.9 3.2 32 334-365 294-328 (330)
192 KOG2931 Differentiation-relate 38.5 47 0.001 31.3 4.2 38 334-371 274-311 (326)
193 PF06342 DUF1057: Alpha/beta h 38.0 2.4E+02 0.0053 26.5 8.8 49 123-186 88-136 (297)
194 PF09292 Neil1-DNA_bind: Endon 36.9 21 0.00045 22.3 1.1 12 40-51 24-35 (39)
195 KOG1553 Predicted alpha/beta h 36.3 87 0.0019 30.3 5.7 107 37-188 240-346 (517)
196 PF03583 LIP: Secretory lipase 35.8 1E+02 0.0022 28.9 6.2 66 119-190 46-116 (290)
197 PF12740 Chlorophyllase2: Chlo 35.2 64 0.0014 29.9 4.6 41 141-187 91-131 (259)
198 KOG1516 Carboxylesterase and r 35.2 1.1E+02 0.0025 31.2 7.0 34 125-159 180-213 (545)
199 PLN02511 hydrolase 34.7 30 0.00065 33.9 2.6 34 331-364 324-363 (388)
200 PF12146 Hydrolase_4: Putative 34.5 1.9E+02 0.004 21.2 6.3 78 21-129 2-79 (79)
201 PF07519 Tannase: Tannase and 34.2 1.3E+02 0.0029 30.4 7.2 77 126-217 104-185 (474)
202 PRK01184 hypothetical protein; 34.1 31 0.00066 29.6 2.3 28 42-69 2-31 (184)
203 PTZ00333 triosephosphate isome 33.2 80 0.0017 29.1 4.9 60 118-189 182-242 (255)
204 KOG4667 Predicted esterase [Li 32.7 1.7E+02 0.0037 26.6 6.6 130 93-267 65-199 (269)
205 PRK00081 coaE dephospho-CoA ki 32.5 45 0.00098 29.1 3.1 30 41-70 2-33 (194)
206 PRK15492 triosephosphate isome 32.1 1.1E+02 0.0023 28.5 5.5 60 119-191 189-249 (260)
207 PRK10949 protease 4; Provision 31.1 37 0.0008 35.7 2.6 70 91-184 115-186 (618)
208 PF06821 Ser_hydrolase: Serine 31.1 48 0.001 28.5 3.0 39 140-188 54-92 (171)
209 PRK14733 coaE dephospho-CoA ki 31.1 48 0.001 29.5 3.0 32 39-70 4-38 (204)
210 COG3150 Predicted esterase [Ge 31.0 91 0.002 27.0 4.4 63 113-196 38-100 (191)
211 PRK13962 bifunctional phosphog 30.9 86 0.0019 33.1 5.2 61 118-190 574-635 (645)
212 PF01083 Cutinase: Cutinase; 30.8 62 0.0013 28.0 3.6 80 96-189 45-125 (179)
213 PRK05855 short chain dehydroge 30.8 40 0.00086 34.4 2.8 33 332-365 259-291 (582)
214 COG3571 Predicted hydrolase of 30.6 57 0.0012 28.1 3.1 29 137-165 85-113 (213)
215 PLN02652 hydrolase; alpha/beta 30.5 41 0.0009 33.1 2.8 30 336-365 356-386 (395)
216 TIGR01618 phage_P_loop phage n 29.7 75 0.0016 28.6 4.1 34 38-72 9-44 (220)
217 PF07849 DUF1641: Protein of u 29.5 20 0.00043 23.1 0.2 16 249-264 16-31 (42)
218 PF03403 PAF-AH_p_II: Platelet 29.3 26 0.00057 34.3 1.2 38 142-191 229-266 (379)
219 KOG2369 Lecithin:cholesterol a 28.5 48 0.001 33.2 2.8 44 119-162 159-203 (473)
220 PF00756 Esterase: Putative es 28.5 21 0.00045 32.2 0.2 37 143-190 117-153 (251)
221 PF03959 FSH1: Serine hydrolas 28.3 67 0.0014 28.4 3.5 64 121-191 86-149 (212)
222 COG3673 Uncharacterized conser 28.1 47 0.001 31.7 2.5 68 90-162 65-143 (423)
223 COG2945 Predicted hydrolase of 28.0 45 0.00098 29.4 2.2 59 99-164 68-126 (210)
224 COG5153 CVT17 Putative lipase 27.8 22 0.00047 33.3 0.3 23 137-159 272-294 (425)
225 KOG4540 Putative lipase essent 27.8 22 0.00047 33.3 0.3 23 137-159 272-294 (425)
226 COG0429 Predicted hydrolase of 27.6 1.1E+02 0.0024 29.4 4.9 54 122-186 132-185 (345)
227 cd02022 DPCK Dephospho-coenzym 27.5 49 0.0011 28.4 2.4 28 43-70 1-30 (179)
228 TIGR03712 acc_sec_asp2 accesso 27.3 1.7E+02 0.0037 29.7 6.3 114 20-188 275-391 (511)
229 KOG2984 Predicted hydrolase [G 26.9 83 0.0018 28.2 3.6 60 91-162 72-135 (277)
230 PF00121 TIM: Triosephosphate 26.8 23 0.00049 32.5 0.2 60 119-190 178-238 (244)
231 TIGR00152 dephospho-CoA kinase 26.8 45 0.00097 28.8 2.1 25 43-67 1-27 (188)
232 KOG1643 Triosephosphate isomer 26.7 1.1E+02 0.0024 27.2 4.3 60 119-190 178-238 (247)
233 COG0529 CysC Adenylylsulfate k 26.0 66 0.0014 28.1 2.8 19 179-197 95-113 (197)
234 PRK14734 coaE dephospho-CoA ki 26.0 69 0.0015 28.2 3.1 29 42-70 2-32 (200)
235 PLN02211 methyl indole-3-aceta 25.8 72 0.0016 29.4 3.4 29 335-364 240-268 (273)
236 PF00561 Abhydrolase_1: alpha/ 25.7 38 0.00083 29.2 1.5 29 332-360 201-229 (230)
237 PRK14565 triosephosphate isome 25.4 1.3E+02 0.0029 27.4 4.9 53 119-191 174-226 (237)
238 COG0149 TpiA Triosephosphate i 25.2 2.1E+02 0.0045 26.4 6.1 69 99-191 170-239 (251)
239 PF01583 APS_kinase: Adenylyls 25.0 41 0.0009 28.5 1.4 13 40-52 1-13 (156)
240 PRK15453 phosphoribulokinase; 25.0 55 0.0012 30.8 2.4 19 39-57 3-23 (290)
241 COG3896 Chloramphenicol 3-O-ph 24.8 54 0.0012 28.1 2.0 28 39-66 21-52 (205)
242 TIGR00705 SppA_67K signal pept 24.7 49 0.0011 34.5 2.2 41 120-165 111-153 (584)
243 COG4782 Uncharacterized protei 24.1 1.9E+02 0.0041 28.2 5.8 49 140-191 190-238 (377)
244 COG3545 Predicted esterase of 24.1 79 0.0017 27.5 2.9 36 140-186 58-93 (181)
245 COG0237 CoaE Dephospho-CoA kin 23.8 83 0.0018 27.9 3.2 30 41-70 2-33 (201)
246 COG4569 MhpF Acetaldehyde dehy 23.5 65 0.0014 28.6 2.4 62 82-154 24-85 (310)
247 COG0221 Ppa Inorganic pyrophos 23.3 1.8E+02 0.0039 25.1 5.0 67 79-145 23-148 (171)
248 cd00412 pyrophosphatase Inorga 22.9 2.8E+02 0.006 23.5 6.0 45 117-165 108-152 (155)
249 PF10609 ParA: ParA/MinD ATPas 22.9 36 0.00079 25.5 0.6 12 92-103 2-13 (81)
250 PF10929 DUF2811: Protein of u 22.8 86 0.0019 21.7 2.3 20 120-139 6-25 (57)
251 COG3946 VirJ Type IV secretory 22.1 1.4E+02 0.003 29.6 4.4 48 115-165 303-350 (456)
252 TIGR01607 PST-A Plasmodium sub 22.0 1.1E+02 0.0024 29.1 4.0 32 334-365 300-332 (332)
253 PF12532 DUF3732: Protein of u 22.0 1.1E+02 0.0024 26.9 3.6 57 92-150 102-167 (193)
254 KOG3877 NADH:ubiquinone oxidor 21.7 85 0.0018 29.5 2.8 51 87-154 67-117 (393)
255 PF05729 NACHT: NACHT domain 21.6 64 0.0014 26.5 2.0 17 43-59 2-20 (166)
256 TIGR00419 tim triosephosphate 20.9 1.9E+02 0.004 25.8 4.8 54 119-189 151-204 (205)
257 PRK05541 adenylylsulfate kinas 20.3 86 0.0019 26.6 2.5 23 37-59 3-27 (176)
258 PF01555 N6_N4_Mtase: DNA meth 20.2 89 0.0019 27.3 2.7 39 92-133 2-40 (231)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-101 Score=745.93 Aligned_cols=354 Identities=32% Similarity=0.528 Sum_probs=303.6
Q ss_pred CCCCCcceeeeecCCCCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCccccccccc
Q 042842 3 KEAFPTRSGYLPVSPATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEP 82 (375)
Q Consensus 3 ~~~~~~~sGy~~v~~~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~ 82 (375)
++.|++|||||+|++..+++|||||+||++ +|++|||||||||||||||+.|+|.|+||++++.++. +|..
T Consensus 39 ~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~---~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~------tL~~ 109 (454)
T KOG1282|consen 39 PLPFKQYSGYVTVNESEGRQLFYWFFESEN---NPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGK------TLYL 109 (454)
T ss_pred CCCcccccceEECCCCCCceEEEEEEEccC---CCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCC------ccee
Confidence 467999999999998778999999999986 6999999999999999999999999999999998875 8999
Q ss_pred CCCccccccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHH
Q 042842 83 NLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHI 162 (375)
Q Consensus 83 n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i 162 (375)
|+||||+.||||||||||||||||++++.++.++++.+|+|+++||++||++||||++|+|||+||||||||||+||++|
T Consensus 110 N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I 189 (454)
T KOG1282|consen 110 NPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEI 189 (454)
T ss_pred CCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHH
Confidence 99999999999999999999999999888888999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCceeecceeeecCCCCCccccchhhhHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC-----Chhhhh---
Q 042842 163 LKQNKRVPVSKREKLHGVAIGNGLTDPVSQVAVHALNAYFIGLINGRQRVELEKAQRKAIRLVKMG-----SWSDAT--- 234 (375)
Q Consensus 163 ~~~n~~~~~~~~inLkGi~IGNg~idp~~q~~~~~~~~~~~gli~~~~~~~l~~~~~~~~~~i~~~-----~~~~a~--- 234 (375)
++.|+.. ..+.|||||++||||++|+..+..++.+|++.||+|++++++.+++.|..|...+... .|..+.
T Consensus 190 ~~~N~~~-~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~~~~~~~ 268 (454)
T KOG1282|consen 190 LKGNKKC-CKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKCNKAVEEF 268 (454)
T ss_pred Hhccccc-cCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHHHHHHHHH
Confidence 9999753 3578999999999999999999999999999999999999999999876543211100 011110
Q ss_pred ---------------hhccC---------CCCCCC---chHHHhhcCcHHHHHHhCCCCCC--ceeecchHHHHHhHHh-
Q 042842 235 ---------------NARHD---------RKDPYA---TSLVTSLLRMDEVKKAFGAKDTI--TFDVCSNVFMKALHED- 284 (375)
Q Consensus 235 ---------------~~~~~---------~~~~y~---~~~~~~yLN~~~Vk~aL~V~~~~--~w~~cs~~V~~~~~~d- 284 (375)
..|.. ....|+ ....+.|||+++||+||||+... .|+.||+.|...+..+
T Consensus 269 ~~~~~~~i~~y~i~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~W~~Cn~~v~~~~~~~~ 348 (454)
T KOG1282|consen 269 DSKTTGDIDNYYILTPDCYPTSYELKKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIGKWERCNDEVNYNYNDDI 348 (454)
T ss_pred HHHHhccCchhhhcchhhccccccccccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCCcccccChhhhcccccCc
Confidence 00110 000112 22337799999999999998765 5999999997544321
Q ss_pred -hh--------h-----c--------cCCCcccHHHHHhhccccchhhhhhcccceeEeC-CEeecEEEEeCCeEEEEEc
Q 042842 285 -LM--------K-----N--------LRDGVASTESWMNTLKWEGIESFLMAERKAWRVK-QALAGYVQKFGNLSNAVVL 341 (375)
Q Consensus 285 -~~--------~-----~--------~i~n~~g~~~~i~~L~w~g~~~f~~a~~~~w~~~-g~v~Gy~k~~~~ltf~~V~ 341 (375)
.| . . ++||++|+++|+++|++.... +++||+++ +||+||++.|++|+|++|+
T Consensus 349 ~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~-----~~~pW~~~~~qvaG~~~~Y~~ltf~tVr 423 (454)
T KOG1282|consen 349 KSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITD-----EWRPWYHKGGQVAGYTKTYGGLTFATVR 423 (454)
T ss_pred cchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCcccc-----CccCCccCCCceeeeEEEecCEEEEEEe
Confidence 11 1 1 899999999999999965444 56899996 8999999999999999999
Q ss_pred CCcccCCCCCcHHHHHHHHHHHcCCCCCCC
Q 042842 342 GAGHLMPADQPLISQTMIEDWVLDKGLFAN 371 (375)
Q Consensus 342 ~AGH~vP~dqP~~~~~mi~~fl~g~~~~~~ 371 (375)
|||||||.|||+++++||++||.|+++...
T Consensus 424 GaGH~VP~~~p~~al~m~~~fl~g~~l~~~ 453 (454)
T KOG1282|consen 424 GAGHMVPYDKPESALIMFQRFLNGQPLPST 453 (454)
T ss_pred CCcccCCCCCcHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999999999998764
No 2
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=2.7e-94 Score=712.02 Aligned_cols=350 Identities=34% Similarity=0.648 Sum_probs=281.0
Q ss_pred CCCCcceeeeecCCCCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccC
Q 042842 4 EAFPTRSGYLPVSPATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPN 83 (375)
Q Consensus 4 ~~~~~~sGy~~v~~~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n 83 (375)
..+++|||||+|+++.+++||||||||++ +|+++|||||||||||||||.|+|+|+|||+++.++ ..+++.|
T Consensus 7 ~~~~~~sGyl~~~~~~~~~lfyw~~~s~~---~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~-----~~~l~~n 78 (415)
T PF00450_consen 7 VPFKQYSGYLPVNDNENAHLFYWFFESRN---DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDG-----PYTLEDN 78 (415)
T ss_dssp SSSEEEEEEEEECTTTTEEEEEEEEE-SS---GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTS-----TSEEEE-
T ss_pred CCceEEEEEEecCCCCCcEEEEEEEEeCC---CCCCccEEEEecCCceeccccccccccCceEEeecc-----ccccccc
Confidence 56889999999997778999999999987 689999999999999999999999999999999443 1389999
Q ss_pred CCccccccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHH
Q 042842 84 LGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHIL 163 (375)
Q Consensus 84 ~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~ 163 (375)
|+||++.||||||||||||||||..+...+..+++++|+++++||+.||.+||+++++||||+||||||+|||.+|.+|+
T Consensus 79 ~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 79 PYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred ccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 99999999999999999999999987766788999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCceeecceeeecCCCCCccccchhhhHHHhhcCCCCHHHHHHHHHHHH----------HHHHHHhcCCh---
Q 042842 164 KQNKRVPVSKREKLHGVAIGNGLTDPVSQVAVHALNAYFIGLINGRQRVELEKAQR----------KAIRLVKMGSW--- 230 (375)
Q Consensus 164 ~~n~~~~~~~~inLkGi~IGNg~idp~~q~~~~~~~~~~~gli~~~~~~~l~~~~~----------~~~~~i~~~~~--- 230 (375)
++|++.. ..+||||||+||||++||..|..++.+|+|.+|+|++++++.+++.|. .|.+.+....+
T Consensus 159 ~~~~~~~-~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 237 (415)
T PF00450_consen 159 QQNKKGD-QPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYA 237 (415)
T ss_dssp HHTCC---STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCH
T ss_pred hcccccc-ccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhcc
Confidence 9987532 268999999999999999999999999999999999999999988873 23332221111
Q ss_pred -------hhhhhhcc-------------CCCCCCCchHHHhhcCcHHHHHHhCCC--CCCceeecchHH-HHHhHHhhhh
Q 042842 231 -------SDATNARH-------------DRKDPYATSLVTSLLRMDEVKKAFGAK--DTITFDVCSNVF-MKALHEDLMK 287 (375)
Q Consensus 231 -------~~a~~~~~-------------~~~~~y~~~~~~~yLN~~~Vk~aL~V~--~~~~w~~cs~~V-~~~~~~d~~~ 287 (375)
...++.+. ...+++....+..|||+++||+||||+ ....|..|+..| ...+..|++.
T Consensus 238 ~~~~~~~~n~Ydi~~~~~~~~~~~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~~w~~~~~~V~~~~~~~d~~~ 317 (415)
T PF00450_consen 238 ISQCNGGINPYDIRQPCYNPSRSSYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDSNVNWQSCNDAVNFNWLYDDFMP 317 (415)
T ss_dssp HHHHHTTSETTSTTSEETT-SHCTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTSSS--SB-HHHHHHCCTCCC-S
T ss_pred cccccCCcceeeeeccccccccccccccccccccchhhHHHHhccHHHHHhhCCCcccCCcccccCcccccccccccccc
Confidence 11111111 112244568889999999999999997 456999999988 3333334433
Q ss_pred c-----------------------cCCCcccHHHHHhhccccchhhhhhcccceeEeCCEeecEEEEeCCeEEEEEcCCc
Q 042842 288 N-----------------------LRDGVASTESWMNTLKWEGIESFLMAERKAWRVKQALAGYVQKFGNLSNAVVLGAG 344 (375)
Q Consensus 288 ~-----------------------~i~n~~g~~~~i~~L~w~g~~~f~~a~~~~w~~~g~v~Gy~k~~~~ltf~~V~~AG 344 (375)
+ ++||++|++.|+++|+|++++.|+.++++ .+++++||+|+++||||++|++||
T Consensus 318 ~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~---~~~~~~G~~k~~~~ltf~~V~~AG 394 (415)
T PF00450_consen 318 SSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRK---VNGQVAGYVKQYGNLTFVTVRGAG 394 (415)
T ss_dssp BCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEE---TTCSEEEEEEEETTEEEEEETT--
T ss_pred cchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCccccccccccc---ccccccceeEEeccEEEEEEcCCc
Confidence 3 89999999999999999999998766554 578999999999999999999999
Q ss_pred ccCCCCCcHHHHHHHHHHHcC
Q 042842 345 HLMPADQPLISQTMIEDWVLD 365 (375)
Q Consensus 345 H~vP~dqP~~~~~mi~~fl~g 365 (375)
||||+|||+++++||++||+|
T Consensus 395 HmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 395 HMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp SSHHHHSHHHHHHHHHHHHCT
T ss_pred ccChhhCHHHHHHHHHHHhcC
Confidence 999999999999999999986
No 3
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=3.8e-92 Score=691.25 Aligned_cols=351 Identities=25% Similarity=0.459 Sum_probs=292.7
Q ss_pred CCCCcceeeeecCCCCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccC
Q 042842 4 EAFPTRSGYLPVSPATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPN 83 (375)
Q Consensus 4 ~~~~~~sGy~~v~~~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n 83 (375)
..+++|||||+|.++.++++|||||||++ +|+++||+||||||||||||.|+|.|+|||+++.++. ..+..++++|
T Consensus 35 ~~~~~~sGy~~v~~~~~~~lf~~f~es~~---~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~-~~~~~~l~~n 110 (437)
T PLN02209 35 LPFELETGYIGIGEEENVQFFYYFIKSDK---NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVY-NGSVPSLVST 110 (437)
T ss_pred CCeeEEEEEEEecCCCCeEEEEEEEecCC---CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCC-CCCcccceeC
Confidence 45889999999987667899999999986 5889999999999999999999999999999987631 1112378999
Q ss_pred CCccccccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHH
Q 042842 84 LGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHIL 163 (375)
Q Consensus 84 ~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~ 163 (375)
++||++.|||||||||+||||||+.++.... +++++|+++++||+.||++||+|+++||||+||||||||||.+|++|+
T Consensus 111 ~~sW~~~anllfiDqPvGtGfSy~~~~~~~~-~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~ 189 (437)
T PLN02209 111 TYSWTKTANIIFLDQPVGSGFSYSKTPIERT-SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEIS 189 (437)
T ss_pred CCchhhcCcEEEecCCCCCCccCCCCCCCcc-CCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHH
Confidence 9999999999999999999999987654444 445677999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCceeecceeeecCCCCCccccchhhhHHHhhcCCCCHHHHHHHHHHHHH-----------HHHHHhcC-Chh
Q 042842 164 KQNKRVPVSKREKLHGVAIGNGLTDPVSQVAVHALNAYFIGLINGRQRVELEKAQRK-----------AIRLVKMG-SWS 231 (375)
Q Consensus 164 ~~n~~~~~~~~inLkGi~IGNg~idp~~q~~~~~~~~~~~gli~~~~~~~l~~~~~~-----------~~~~i~~~-~~~ 231 (375)
++|++ ....+||||||+||||++||..|..++.+|+|.+|||++++++.+++.|.. |.+++... .|.
T Consensus 190 ~~~~~-~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~C~~~i~~~~~~~ 268 (437)
T PLN02209 190 KGNYI-CCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKKCLKLVEEYHKCT 268 (437)
T ss_pred hhccc-ccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHHHHHHHHHHHHHh
Confidence 98864 234689999999999999999999999999999999999999999888753 65554321 111
Q ss_pred hhhh-------hcc-------CCCC-CCCchHHHhhcCcHHHHHHhCCCCC--CceeecchHHHHHhHHhhhhc------
Q 042842 232 DATN-------ARH-------DRKD-PYATSLVTSLLRMDEVKKAFGAKDT--ITFDVCSNVFMKALHEDLMKN------ 288 (375)
Q Consensus 232 ~a~~-------~~~-------~~~~-~y~~~~~~~yLN~~~Vk~aL~V~~~--~~w~~cs~~V~~~~~~d~~~~------ 288 (375)
...+ .|. +..| +++...+..|||+++||+||||+.. ..|..|+..+ .+..|.+++
T Consensus 269 ~~~~~~~~~~~~c~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~~~~~~--~~~~d~~~~~~~~~~ 346 (437)
T PLN02209 269 DNINSHHTLIANCDDSNTQHISPDCYYYPYHLVECWANNESVREALHVDKGSIGEWIRDHRGI--PYKSDIRSSIPYHMN 346 (437)
T ss_pred hcCCccccccccccccccccCCCCcccccHHHHHHHhCCHHHHHHhCCCCCCCCCCccccchh--hcccchhhhHHHHHH
Confidence 1111 111 1122 2334568899999999999999853 3799998754 233332211
Q ss_pred ----------------cCCCcccHHHHHhhccccchhhhhhcccceeEeCCEeecEEEEeCC-eEEEEEcCCcccCCCCC
Q 042842 289 ----------------LRDGVASTESWMNTLKWEGIESFLMAERKAWRVKQALAGYVQKFGN-LSNAVVLGAGHLMPADQ 351 (375)
Q Consensus 289 ----------------~i~n~~g~~~~i~~L~w~g~~~f~~a~~~~w~~~g~v~Gy~k~~~~-ltf~~V~~AGH~vP~dq 351 (375)
++||++|+++|+++|+|++... |++|+++++++||+|+++| |||++|++|||||| ||
T Consensus 347 ~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~-----~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~q 420 (437)
T PLN02209 347 NSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDD-----WRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YL 420 (437)
T ss_pred HHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCC-----eeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cC
Confidence 8999999999999999999875 4799999999999999996 99999999999998 79
Q ss_pred cHHHHHHHHHHHcCCCC
Q 042842 352 PLISQTMIEDWVLDKGL 368 (375)
Q Consensus 352 P~~~~~mi~~fl~g~~~ 368 (375)
|++|++||++||+|++|
T Consensus 421 P~~al~m~~~fi~~~~l 437 (437)
T PLN02209 421 PEESSIMFQRWISGQPL 437 (437)
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 99999999999999875
No 4
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=6.1e-92 Score=697.83 Aligned_cols=355 Identities=27% Similarity=0.459 Sum_probs=314.3
Q ss_pred CCCCCcceeeeecCC-CCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccc
Q 042842 3 KEAFPTRSGYLPVSP-ATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALE 81 (375)
Q Consensus 3 ~~~~~~~sGy~~v~~-~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~ 81 (375)
+..+++|||||+|.+ ..+++||||||||++ +|+++||+||||||||||||.|+|.|+|||+|+.++. +++
T Consensus 42 ~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~---~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~------~~~ 112 (462)
T PTZ00472 42 DPSVNQWSGYFDIPGNQTDKHYFYWAFGPRN---GNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTG------DIY 112 (462)
T ss_pred CCCCcceeEEEEeCCCCCCceEEEEEEEcCC---CCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCC------cee
Confidence 356899999999975 457899999999986 5889999999999999999999999999999998854 799
Q ss_pred cCCCccccccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHH
Q 042842 82 PNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYH 161 (375)
Q Consensus 82 ~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~ 161 (375)
.|++||++.+||||||||+||||||.... .++.+++++|+|+++||+.||++||+++.+++||+||||||+|+|.+|.+
T Consensus 113 ~n~~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 113 NNTYSWNNEAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred ECCcccccccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHH
Confidence 99999999999999999999999998654 56788899999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCceeecceeeecCCCCCccccchhhhHHHhh-------cCCCCHHHHHHHHHHHHHHHHHHhcCCh----
Q 042842 162 ILKQNKRVPVSKREKLHGVAIGNGLTDPVSQVAVHALNAYF-------IGLINGRQRVELEKAQRKAIRLVKMGSW---- 230 (375)
Q Consensus 162 i~~~n~~~~~~~~inLkGi~IGNg~idp~~q~~~~~~~~~~-------~gli~~~~~~~l~~~~~~~~~~i~~~~~---- 230 (375)
|+++|++ ....+||||||+||||++||..|..++.+|+|. +|+|++++++++++.++.|.+.+..|..
T Consensus 192 i~~~n~~-~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~ 270 (462)
T PTZ00472 192 INMGNKK-GDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDD 270 (462)
T ss_pred HHhhccc-cCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCC
Confidence 9999864 234689999999999999999999999999995 5799999999999988888877655432
Q ss_pred -----hhhhhhc------------c----CCCC----CCCchHHHhhcCcHHHHHHhCCCCCCceeecchHHHHHhHHhh
Q 042842 231 -----SDATNAR------------H----DRKD----PYATSLVTSLLRMDEVKKAFGAKDTITFDVCSNVFMKALHEDL 285 (375)
Q Consensus 231 -----~~a~~~~------------~----~~~~----~y~~~~~~~yLN~~~Vk~aL~V~~~~~w~~cs~~V~~~~~~d~ 285 (375)
..+...| + +..| |++...++.|||+++||+||||+. ..|+.|++.|...|..|+
T Consensus 271 ~~~~c~~a~~~c~~~~~~~~~~g~n~Ydi~~~c~~~~c~~~~~~~~yLN~~~Vq~AL~v~~-~~w~~c~~~V~~~~~~D~ 349 (462)
T PTZ00472 271 ADSSCSVARALCNEYIAVYSATGLNNYDIRKPCIGPLCYNMDNTIAFMNREDVQSSLGVKP-ATWQSCNMEVNLMFEMDW 349 (462)
T ss_pred cchHHHHHHHHHHHHHHHHHhcCCChhheeccCCCCCccCHHHHHHHhCCHHHHHHhCCCC-CCceeCCHHHHHHhhhcc
Confidence 1111111 1 2223 345567899999999999999974 589999999998887776
Q ss_pred hhc-----------------------cCCCcccHHHHHhhccccchhhhhhccccee-EeCCEeecEEEEeC-----CeE
Q 042842 286 MKN-----------------------LRDGVASTESWMNTLKWEGIESFLMAERKAW-RVKQALAGYVQKFG-----NLS 336 (375)
Q Consensus 286 ~~~-----------------------~i~n~~g~~~~i~~L~w~g~~~f~~a~~~~w-~~~g~v~Gy~k~~~-----~lt 336 (375)
+++ ++||++|+++|+++|+|++++.|+++++++| .++++++||+|+++ +|+
T Consensus 350 ~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~ 429 (462)
T PTZ00472 350 MKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFS 429 (462)
T ss_pred ccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeE
Confidence 654 8999999999999999999999999999999 57899999999999 999
Q ss_pred EEEEcCCcccCCCCCcHHHHHHHHHHHcCCCCC
Q 042842 337 NAVVLGAGHLMPADQPLISQTMIEDWVLDKGLF 369 (375)
Q Consensus 337 f~~V~~AGH~vP~dqP~~~~~mi~~fl~g~~~~ 369 (375)
|++|++||||||+|||+++++||++|+.|++|+
T Consensus 430 ~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~~ 462 (462)
T PTZ00472 430 FVQVYNAGHMVPMDQPAVALTMINRFLRNRPLS 462 (462)
T ss_pred EEEECCCCccChhhHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999998764
No 5
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=6.7e-91 Score=682.46 Aligned_cols=351 Identities=23% Similarity=0.462 Sum_probs=290.3
Q ss_pred CCCCcceeeeecCCCCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccC
Q 042842 4 EAFPTRSGYLPVSPATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPN 83 (375)
Q Consensus 4 ~~~~~~sGy~~v~~~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n 83 (375)
..++++||||+|+++.++++|||||||++ +|+++||||||||||||||+.|+|+|+|||+++.+... ....++++|
T Consensus 33 ~~~~~~sGy~~v~~~~~~~lfy~f~es~~---~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~-~~~~~l~~n 108 (433)
T PLN03016 33 LPFELETGYIGIGEDENVQFFYYFIKSEN---NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFN-GSAPSLFST 108 (433)
T ss_pred CCeeEEEEEEEecCCCCeEEEEEEEecCC---CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccC-CCCCceeeC
Confidence 45789999999987667899999999986 58899999999999999999999999999999754110 112379999
Q ss_pred CCccccccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHH
Q 042842 84 LGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHIL 163 (375)
Q Consensus 84 ~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~ 163 (375)
++||++.|||||||||+||||||+.++... .++.++|+++++||++||++||+|+++||||+||||||||||.+|++|+
T Consensus 109 ~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~ 187 (433)
T PLN03016 109 TYSWTKMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEIS 187 (433)
T ss_pred CCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHH
Confidence 999999999999999999999998765444 3455667999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCceeecceeeecCCCCCccccchhhhHHHhhcCCCCHHHHHHHHHHHHH-----------HHHHHhcC-Chh
Q 042842 164 KQNKRVPVSKREKLHGVAIGNGLTDPVSQVAVHALNAYFIGLINGRQRVELEKAQRK-----------AIRLVKMG-SWS 231 (375)
Q Consensus 164 ~~n~~~~~~~~inLkGi~IGNg~idp~~q~~~~~~~~~~~gli~~~~~~~l~~~~~~-----------~~~~i~~~-~~~ 231 (375)
++|++. ...+||||||+||||++||..|..++.+|+|.+|||++++++.+++.|+. |.+.+..- .+.
T Consensus 188 ~~n~~~-~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C~~~~~~~~~~~ 266 (433)
T PLN03016 188 QGNYIC-CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCT 266 (433)
T ss_pred hhcccc-cCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHHHHHHHHHHHHh
Confidence 988642 34689999999999999999999999999999999999999999887642 33322110 000
Q ss_pred ---hhhhhc----c----CCCCCC--CchHHHhhcCcHHHHHHhCCCC--CCceeecchHHHHHhHHhhhhc--------
Q 042842 232 ---DATNAR----H----DRKDPY--ATSLVTSLLRMDEVKKAFGAKD--TITFDVCSNVFMKALHEDLMKN-------- 288 (375)
Q Consensus 232 ---~a~~~~----~----~~~~~y--~~~~~~~yLN~~~Vk~aL~V~~--~~~w~~cs~~V~~~~~~d~~~~-------- 288 (375)
..++.. + +...|+ +...++.|||+++||+||||+. ...|..|+..|. +..|.+.+
T Consensus 267 ~~~n~yni~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~cn~~v~--~~~d~~~~~~~~~~~l 344 (433)
T PLN03016 267 AKINIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIP--YNHDIVSSIPYHMNNS 344 (433)
T ss_pred cCCChhhccCCcccccccCCCcccccchHHHHHHhCCHHHHHHhCCCCCCCCCCccCCcccc--cccccchhhHHHHHHH
Confidence 011111 0 001122 2356789999999999999975 358999998874 33332211
Q ss_pred --------------cCCCcccHHHHHhhccccchhhhhhcccceeEeCCEeecEEEEeCC-eEEEEEcCCcccCCCCCcH
Q 042842 289 --------------LRDGVASTESWMNTLKWEGIESFLMAERKAWRVKQALAGYVQKFGN-LSNAVVLGAGHLMPADQPL 353 (375)
Q Consensus 289 --------------~i~n~~g~~~~i~~L~w~g~~~f~~a~~~~w~~~g~v~Gy~k~~~~-ltf~~V~~AGH~vP~dqP~ 353 (375)
++||++|+++|+++|+|++... |++|+++++++||+|++++ |||++|++|||||| |||+
T Consensus 345 ~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~-----~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~ 418 (433)
T PLN03016 345 ISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHN-----WRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPN 418 (433)
T ss_pred hcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCC-----cccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHH
Confidence 8999999999999999999875 5799999999999999975 99999999999998 7999
Q ss_pred HHHHHHHHHHcCCCC
Q 042842 354 ISQTMIEDWVLDKGL 368 (375)
Q Consensus 354 ~~~~mi~~fl~g~~~ 368 (375)
+|++||++||+|++|
T Consensus 419 ~al~m~~~Fi~~~~l 433 (433)
T PLN03016 419 ETFIMFQRWISGQPL 433 (433)
T ss_pred HHHHHHHHHHcCCCC
Confidence 999999999999875
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=1.2e-66 Score=495.89 Aligned_cols=269 Identities=21% Similarity=0.414 Sum_probs=219.9
Q ss_pred ccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCC
Q 042842 90 ISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRV 169 (375)
Q Consensus 90 ~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~ 169 (375)
.|||||||||+||||||+.++... .+++++|+|++.||++||++||+|+++||||+||||||||||.+|++|+++|++
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~-~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~- 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI- 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc-
Confidence 489999999999999998765444 445556699999999999999999999999999999999999999999998864
Q ss_pred CCCceeecceeeecCCCCCccccchhhhHHHhhcCCCCHHHHHHHHHHHH-----------HHHHHHhcC-Chh---hhh
Q 042842 170 PVSKREKLHGVAIGNGLTDPVSQVAVHALNAYFIGLINGRQRVELEKAQR-----------KAIRLVKMG-SWS---DAT 234 (375)
Q Consensus 170 ~~~~~inLkGi~IGNg~idp~~q~~~~~~~~~~~gli~~~~~~~l~~~~~-----------~~~~~i~~~-~~~---~a~ 234 (375)
....+||||||+|||||++|..|..++.+|+|.+|+|++++++.+++.|. .|.+++..- .+. ..+
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 158 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIH 158 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHh
Confidence 23467999999999999999999999999999999999999999988753 344332210 000 011
Q ss_pred hhc----c----CCCCCC--CchHHHhhcCcHHHHHHhCCCC--CCceeecchHHHHHhHHhhhhc--------------
Q 042842 235 NAR----H----DRKDPY--ATSLVTSLLRMDEVKKAFGAKD--TITFDVCSNVFMKALHEDLMKN-------------- 288 (375)
Q Consensus 235 ~~~----~----~~~~~y--~~~~~~~yLN~~~Vk~aL~V~~--~~~w~~cs~~V~~~~~~d~~~~-------------- 288 (375)
+.+ + +...|+ +...++.|||+++||+||||+. ...|..||..|. +..|++.+
T Consensus 159 ~~~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~--~~~d~~~~~~~~~~~l~~~i~V 236 (319)
T PLN02213 159 HILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIP--YNHDIVSSIPYHMNNSISGYRS 236 (319)
T ss_pred hcccCcccCccCCCCCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCcccc--cccccccchHHHHHHHhcCceE
Confidence 111 1 001122 2356899999999999999975 358999998874 33333211
Q ss_pred --------cCCCcccHHHHHhhccccchhhhhhcccceeEeCCEeecEEEEeCC-eEEEEEcCCcccCCCCCcHHHHHHH
Q 042842 289 --------LRDGVASTESWMNTLKWEGIESFLMAERKAWRVKQALAGYVQKFGN-LSNAVVLGAGHLMPADQPLISQTMI 359 (375)
Q Consensus 289 --------~i~n~~g~~~~i~~L~w~g~~~f~~a~~~~w~~~g~v~Gy~k~~~~-ltf~~V~~AGH~vP~dqP~~~~~mi 359 (375)
++||++|+++|+++|+|+++.. |++|+++++++||+|++++ |||++|++|||||| |||+++++||
T Consensus 237 liY~Gd~D~icn~~g~~~wi~~L~w~~~~~-----~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~ 310 (319)
T PLN02213 237 LIYSGDHDIAVPFLATQAWIRSLNYSPIHN-----WRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMF 310 (319)
T ss_pred EEEECCcCeeCCcHhHHHHHHhcCCCCCCC-----CccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHH
Confidence 8999999999999999998875 5799999999999999986 99999999999998 7999999999
Q ss_pred HHHHcCCCC
Q 042842 360 EDWVLDKGL 368 (375)
Q Consensus 360 ~~fl~g~~~ 368 (375)
++||+|++|
T Consensus 311 ~~fi~~~~~ 319 (319)
T PLN02213 311 QRWISGQPL 319 (319)
T ss_pred HHHHcCCCC
Confidence 999999865
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-67 Score=505.04 Aligned_cols=351 Identities=26% Similarity=0.431 Sum_probs=281.4
Q ss_pred CCcceeeeecCCCCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCC
Q 042842 6 FPTRSGYLPVSPATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLG 85 (375)
Q Consensus 6 ~~~~sGy~~v~~~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~ 85 (375)
+++++||.+.. ..+|||+|++++ +|.++|+||||||||||||+.|+|.|+||.+|+.+.+ +.--.||+
T Consensus 74 v~~~~g~~d~e----d~~ffy~fe~~n---dp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~-----P~~~~NP~ 141 (498)
T COG2939 74 VRDYTGYPDAE----DFFFFYTFESPN---DPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTS-----PSYPDNPG 141 (498)
T ss_pred hhhccCCcccc----eeEEEEEecCCC---CCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCC-----CCCCCCcc
Confidence 34566663332 249999999965 6889999999999999999999999999999998831 01127999
Q ss_pred ccccccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCC--CEEEEecCCCcccchHHHHHHH
Q 042842 86 SWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNR--PIYVTGESYAGKSIPSIGYHIL 163 (375)
Q Consensus 86 sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~--~~~i~GESYgG~yvp~~a~~i~ 163 (375)
||++++||||||||+|||||++ ..++..++...+.+|++.|++.||+.||++.+. ++||+||||||+|+|.||+.|+
T Consensus 142 SW~~~adLvFiDqPvGTGfS~a-~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~ 220 (498)
T COG2939 142 SWLDFADLVFIDQPVGTGFSRA-LGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELL 220 (498)
T ss_pred ccccCCceEEEecCcccCcccc-cccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHH
Confidence 9999999999999999999997 233557788899999999999999999999877 9999999999999999999999
Q ss_pred HhccCCCCCceeecceeeecCC-CCCccccchhhhHHHhhc----CCCCHHHHHHHHHHHH--HHHHHHhcCC----hhh
Q 042842 164 KQNKRVPVSKREKLHGVAIGNG-LTDPVSQVAVHALNAYFI----GLINGRQRVELEKAQR--KAIRLVKMGS----WSD 232 (375)
Q Consensus 164 ~~n~~~~~~~~inLkGi~IGNg-~idp~~q~~~~~~~~~~~----gli~~~~~~~l~~~~~--~~~~~i~~~~----~~~ 232 (375)
++|.. ..-.+||++++|||| +|||..|+..|..++... +.++.+.+.++++.|+ .|..++..+. +..
T Consensus 221 ~~~~~--~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~ 298 (498)
T COG2939 221 EDNIA--LNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQP 298 (498)
T ss_pred Hhccc--cCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhH
Confidence 98632 235799999999999 999999999999999854 4566777777777554 3444433221 100
Q ss_pred h---h-------------------hhcc-CCCC--------CCC-chHHHhhcCcHHHHHHhCCCCCCceeecchHHHHH
Q 042842 233 A---T-------------------NARH-DRKD--------PYA-TSLVTSLLRMDEVKKAFGAKDTITFDVCSNVFMKA 280 (375)
Q Consensus 233 a---~-------------------~~~~-~~~~--------~y~-~~~~~~yLN~~~Vk~aL~V~~~~~w~~cs~~V~~~ 280 (375)
+ . +.++ +..| +|+ .....+|++...+++.++... ..|..|+..+...
T Consensus 299 c~~~~~~~~~~~~~~~~r~~~~~~n~y~~r~~~~d~g~~~~~y~~~~~~ld~~~~~~~~~~~~~~~-d~~~~c~t~a~~~ 377 (498)
T COG2939 299 CENASAYLTGLMREYVGRAGGRLLNVYDIREECRDPGLGGSCYDTLSTSLDYFNFDPEQEVNDPEV-DNISGCTTDAMTD 377 (498)
T ss_pred HHHHHHHHHhcchhhhccccccccccccchhhcCCCCcccccccceeeccccccccchhccccccc-cchhccchHHHHh
Confidence 0 0 0011 1112 233 456778999888998888642 3799999999877
Q ss_pred hH---Hhhhhc-----------------------cCCCcccHHHHHhhccccchhhhhhcccceeEe--CCEeecEEEEe
Q 042842 281 LH---EDLMKN-----------------------LRDGVASTESWMNTLKWEGIESFLMAERKAWRV--KQALAGYVQKF 332 (375)
Q Consensus 281 ~~---~d~~~~-----------------------~i~n~~g~~~~i~~L~w~g~~~f~~a~~~~w~~--~g~v~Gy~k~~ 332 (375)
|. .++++. .+||+.++++|...|+|.+...|..+...+|.. +.+..|-++++
T Consensus 378 f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~ 457 (498)
T COG2939 378 FLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMGGYKSY 457 (498)
T ss_pred hhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhccccccc
Confidence 73 344432 799999999999999999999999998888864 67788888899
Q ss_pred CCeEEEEEcCCcccCCCCCcHHHHHHHHHHHcCCCCCCCc
Q 042842 333 GNLSNAVVLGAGHLMPADQPLISQTMIEDWVLDKGLFANR 372 (375)
Q Consensus 333 ~~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~g~~~~~~~ 372 (375)
+|++|++++.||||||.|+|+.+++|++.|+.+...++.+
T Consensus 458 ~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~~~~~~~ 497 (498)
T COG2939 458 RNLTFLRIYEAGHMVPYDRPESSLEMVNLWINGYGAFANL 497 (498)
T ss_pred CCceEEEEecCcceeecCChHHHHHHHHHHHhhccccccC
Confidence 9999999999999999999999999999999987766653
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.5e-66 Score=465.21 Aligned_cols=338 Identities=29% Similarity=0.486 Sum_probs=302.8
Q ss_pred ceeeeecCCCCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHH-hHhhhcccCcEEcCCCCCcccccccccCCCcc
Q 042842 9 RSGYLPVSPATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSM-LGNFLEVGPWRVTHRPNTTQQQLALEPNLGSW 87 (375)
Q Consensus 9 ~sGy~~v~~~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~-~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW 87 (375)
-.||++|+. ++|+|||+|.+..+. ...+|+.|||+||||+||. +|+|.|+||...+ +++|+++|
T Consensus 4 ~wg~v~vr~--~a~~F~wly~~~~~~--ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----------~~~r~~TW 68 (414)
T KOG1283|consen 4 DWGYVDVRT--GAHMFWWLYYATANV--KSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----------GSPRDWTW 68 (414)
T ss_pred cccceeeec--CceEEEEEeeecccc--ccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----------CCcCCchh
Confidence 479999986 799999999987643 3689999999999999775 6999999998774 77899999
Q ss_pred ccccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhcc
Q 042842 88 NRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNK 167 (375)
Q Consensus 88 ~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~ 167 (375)
.+.|+|||||.|||+||||.+..+.|.++..++|.||.+.|+.||..||||+.+||||+-|||||+.++.+|..+.+..+
T Consensus 69 lk~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk 148 (414)
T KOG1283|consen 69 LKDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIK 148 (414)
T ss_pred hhhccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHh
Confidence 99999999999999999999988899999999999999999999999999999999999999999999999999998877
Q ss_pred CCCCCceeecceeeecCCCCCccccchhhhHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCChhhhhhhcc---------
Q 042842 168 RVPVSKREKLHGVAIGNGLTDPVSQVAVHALNAYFIGLINGRQRVELEKAQRKAIRLVKMGSWSDATNARH--------- 238 (375)
Q Consensus 168 ~~~~~~~inLkGi~IGNg~idp~~q~~~~~~~~~~~gli~~~~~~~l~~~~~~~~~~i~~~~~~~a~~~~~--------- 238 (375)
+ ++.+.|+.||++|+.||+|...+.+..++++..+++|+...+..++...+|...+..+.|..|+....
T Consensus 149 ~--G~i~~nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~ 226 (414)
T KOG1283|consen 149 R--GEIKLNFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRE 226 (414)
T ss_pred c--CceeecceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeec
Confidence 5 46889999999999999999999999999999999999999999999999999998887776643221
Q ss_pred --------------------------------CCCC-----CCCchHHHhhcCcHHHHHHhCCCC-CCceeecchHHHHH
Q 042842 239 --------------------------------DRKD-----PYATSLVTSLLRMDEVKKAFGAKD-TITFDVCSNVFMKA 280 (375)
Q Consensus 239 --------------------------------~~~~-----~y~~~~~~~yLN~~~Vk~aL~V~~-~~~w~~cs~~V~~~ 280 (375)
++.| +-+.+.++++||-| ||++|++.+ ...|...+..|...
T Consensus 227 sn~VdfYNil~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~~~~wGgqsg~vFt~ 305 (414)
T KOG1283|consen 227 SNGVDFYNILTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPGGVKWGGQSGDVFTK 305 (414)
T ss_pred ccCcceeeeeccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhccc-ccccccccCCCCcccCcCCchHHH
Confidence 0000 01135688899988 999999864 46999999999999
Q ss_pred hHHhhhhc-----------------------cCCCcccHHHHHhhccccchhhhhhcccceeEeCCEeecEEEEeCCeEE
Q 042842 281 LHEDLMKN-----------------------LRDGVASTESWMNTLKWEGIESFLMAERKAWRVKQALAGYVQKFGNLSN 337 (375)
Q Consensus 281 ~~~d~~~~-----------------------~i~n~~g~~~~i~~L~w~g~~~f~~a~~~~w~~~g~v~Gy~k~~~~ltf 337 (375)
+..|+|++ +||++.|+++|+..|.|+....|+..+|...+++-...||.|.|+||.|
T Consensus 306 lq~dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~f 385 (414)
T KOG1283|consen 306 LQGDFMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLSF 385 (414)
T ss_pred hhhhhcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhcccee
Confidence 99999988 8999999999999999999999998888877777789999999999999
Q ss_pred EEEcCCcccCCCCCcHHHHHHHHHHHc
Q 042842 338 AVVLGAGHLMPADQPLISQTMIEDWVL 364 (375)
Q Consensus 338 ~~V~~AGH~vP~dqP~~~~~mi~~fl~ 364 (375)
..|..||||||.|+|+.|.+|++.+.+
T Consensus 386 ~wilraghmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 386 FWILRAGHMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred EEeecccCcccCCCHHHHhhheeeccc
Confidence 999999999999999999999987653
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.81 E-value=2.4e-08 Score=92.13 Aligned_cols=129 Identities=21% Similarity=0.296 Sum_probs=77.8
Q ss_pred ceeeeecCCCCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHh-HhhhcccCcEEcCCCCCcccccccccCCCcc
Q 042842 9 RSGYLPVSPATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSML-GNFLEVGPWRVTHRPNTTQQQLALEPNLGSW 87 (375)
Q Consensus 9 ~sGy~~v~~~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~-g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW 87 (375)
..++++++ +..+.|.-+.. +...|.||++.||||+++.. ..+.+ .+..
T Consensus 3 ~~~~~~~~---~~~~~~~~~~~------~~~~~~vl~~hG~~g~~~~~~~~~~~-----------------~l~~----- 51 (288)
T TIGR01250 3 IEGIITVD---GGYHLFTKTGG------EGEKIKLLLLHGGPGMSHEYLENLRE-----------------LLKE----- 51 (288)
T ss_pred ccceecCC---CCeEEEEeccC------CCCCCeEEEEcCCCCccHHHHHHHHH-----------------HHHh-----
Confidence 45677764 33444443321 23467889999999997643 22211 1111
Q ss_pred ccccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhcc
Q 042842 88 NRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNK 167 (375)
Q Consensus 88 ~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~ 167 (375)
+-.+++-+|. .|.|.|.......-..+.+..++++..++. . +..++++|+|+|+||..+..+|..-
T Consensus 52 -~g~~vi~~d~-~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~liG~S~Gg~ia~~~a~~~----- 117 (288)
T TIGR01250 52 -EGREVIMYDQ-LGCGYSDQPDDSDELWTIDYFVDELEEVRE----K---LGLDKFYLLGHSWGGMLAQEYALKY----- 117 (288)
T ss_pred -cCCEEEEEcC-CCCCCCCCCCcccccccHHHHHHHHHHHHH----H---cCCCcEEEEEeehHHHHHHHHHHhC-----
Confidence 1367999995 599998532211101345556666544433 2 2345699999999999888887642
Q ss_pred CCCCCceeecceeeecCCCCC
Q 042842 168 RVPVSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 168 ~~~~~~~inLkGi~IGNg~id 188 (375)
+..++++++.++...
T Consensus 118 ------p~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 118 ------GQHLKGLIISSMLDS 132 (288)
T ss_pred ------ccccceeeEeccccc
Confidence 123788888887654
No 10
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.70 E-value=1.9e-07 Score=85.61 Aligned_cols=102 Identities=16% Similarity=0.163 Sum_probs=71.6
Q ss_pred CCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCC
Q 042842 37 LSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRN 116 (375)
Q Consensus 37 p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~ 116 (375)
+.+.|.||++.|.+|.+..+..+.+ . +.+..+++.+|. .|.|.|... . ..+
T Consensus 13 ~~~~~~iv~lhG~~~~~~~~~~~~~-----------------~-------l~~~~~vi~~D~-~G~G~s~~~--~--~~~ 63 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLDNLGVLAR-----------------D-------LVNDHDIIQVDM-RNHGLSPRD--P--VMN 63 (255)
T ss_pred CCCCCCEEEECCCCCchhHHHHHHH-----------------H-------HhhCCeEEEECC-CCCCCCCCC--C--CCC
Confidence 5678999999999888766643321 1 123468999995 589988532 1 245
Q ss_pred hHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCC
Q 042842 117 QSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNG 185 (375)
Q Consensus 117 ~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg 185 (375)
.++.++|+..+|..+ ...+++|+|+|.||..+..+|.+.-+. ++++++.++
T Consensus 64 ~~~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~~-----------v~~lvli~~ 114 (255)
T PRK10673 64 YPAMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPDR-----------IDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHhh-----------cceEEEEec
Confidence 667788887777642 335799999999999998888653222 778887653
No 11
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.63 E-value=1.8e-06 Score=78.37 Aligned_cols=107 Identities=17% Similarity=0.216 Sum_probs=71.6
Q ss_pred CCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCCh
Q 042842 38 SQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQ 117 (375)
Q Consensus 38 ~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~ 117 (375)
.+.|+||++.|.+|.+..+..+.+ .+ .+..+++-+| ..|.|.|..... ...+.
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~-----------------~l-------~~~~~vi~~D-~~G~G~S~~~~~--~~~~~ 63 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLD-----------------VL-------TQRFHVVTYD-HRGTGRSPGELP--PGYSI 63 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHH-----------------HH-------HhccEEEEEc-CCCCCCCCCCCc--ccCCH
Confidence 358999999999877766532221 11 2346899999 579999953222 12345
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCc
Q 042842 118 SSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDP 189 (375)
Q Consensus 118 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp 189 (375)
++.++++.+++.. +...+++|+|+|+||..+..++.+.-+ .++++++.+++..+
T Consensus 64 ~~~~~~~~~~i~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~~~-----------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 64 AHMADDVLQLLDA-------LNIERFHFVGHALGGLIGLQLALRYPE-----------RLLSLVLINAWSRP 117 (257)
T ss_pred HHHHHHHHHHHHH-------hCCCcEEEEEechhHHHHHHHHHHChH-----------HhHHheeecCCCCC
Confidence 5566666655543 234579999999999988888864322 27888888887654
No 12
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.58 E-value=5.6e-06 Score=77.84 Aligned_cols=129 Identities=21% Similarity=0.303 Sum_probs=76.1
Q ss_pred CCC-CCCcceeeeecCCCCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCccccccc
Q 042842 2 PKE-AFPTRSGYLPVSPATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLAL 80 (375)
Q Consensus 2 ~~~-~~~~~sGy~~v~~~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~ 80 (375)
|++ ..+..+.+++++ +..++|- ... ..|.||.|.|.|..+..+-.+. | .
T Consensus 7 ~~~~~~~~~~~~~~~~---~~~i~y~---~~G------~~~~iv~lHG~~~~~~~~~~~~---~--------------~- 56 (286)
T PRK03204 7 PDPQLYPFESRWFDSS---RGRIHYI---DEG------TGPPILLCHGNPTWSFLYRDII---V--------------A- 56 (286)
T ss_pred CCCccccccceEEEcC---CcEEEEE---ECC------CCCEEEEECCCCccHHHHHHHH---H--------------H-
Confidence 444 445567888885 3456543 221 2477889999986555543221 1 1
Q ss_pred ccCCCccccccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHH
Q 042842 81 EPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGY 160 (375)
Q Consensus 81 ~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~ 160 (375)
+.+..+++-+| ..|.|.|.... ....+.+..++++.. +++. +...+++|+|+|+||..+-.++.
T Consensus 57 ------l~~~~~vi~~D-~~G~G~S~~~~--~~~~~~~~~~~~~~~----~~~~---~~~~~~~lvG~S~Gg~va~~~a~ 120 (286)
T PRK03204 57 ------LRDRFRCVAPD-YLGFGLSERPS--GFGYQIDEHARVIGE----FVDH---LGLDRYLSMGQDWGGPISMAVAV 120 (286)
T ss_pred ------HhCCcEEEEEC-CCCCCCCCCCC--ccccCHHHHHHHHHH----HHHH---hCCCCEEEEEECccHHHHHHHHH
Confidence 12346899999 56999984221 222344444555444 4433 23467999999999976555543
Q ss_pred HHHHhccCCCCCceeecceeeecCCCC
Q 042842 161 HILKQNKRVPVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 161 ~i~~~n~~~~~~~~inLkGi~IGNg~i 187 (375)
.- .-.++++++.++..
T Consensus 121 ~~-----------p~~v~~lvl~~~~~ 136 (286)
T PRK03204 121 ER-----------ADRVRGVVLGNTWF 136 (286)
T ss_pred hC-----------hhheeEEEEECccc
Confidence 21 12388888887754
No 13
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.41 E-value=8.1e-06 Score=77.19 Aligned_cols=130 Identities=17% Similarity=0.213 Sum_probs=79.3
Q ss_pred CcceeeeecCCCCC--ceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCC
Q 042842 7 PTRSGYLPVSPATG--SAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNL 84 (375)
Q Consensus 7 ~~~sGy~~v~~~~~--~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~ 84 (375)
|..=.|+.+....+ .+++|.-. . ++ +.|.||.+.|.|+.+..+..+. | .+..
T Consensus 18 ~~~~~~~~~~~~~~~~~~i~y~~~---G---~~-~~~~lvliHG~~~~~~~w~~~~---~--------------~L~~-- 71 (302)
T PRK00870 18 PFAPHYVDVDDGDGGPLRMHYVDE---G---PA-DGPPVLLLHGEPSWSYLYRKMI---P--------------ILAA-- 71 (302)
T ss_pred CCCceeEeecCCCCceEEEEEEec---C---CC-CCCEEEEECCCCCchhhHHHHH---H--------------HHHh--
Confidence 44467888875223 35665532 1 12 4688999999988877764322 1 1211
Q ss_pred CccccccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHH
Q 042842 85 GSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILK 164 (375)
Q Consensus 85 ~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~ 164 (375)
+-.+|+.+| ..|.|.|.... .....+.++.++++.++| +. +...+++|+|+|+||..+-.+|.+--+
T Consensus 72 ----~gy~vi~~D-l~G~G~S~~~~-~~~~~~~~~~a~~l~~~l----~~---l~~~~v~lvGhS~Gg~ia~~~a~~~p~ 138 (302)
T PRK00870 72 ----AGHRVIAPD-LIGFGRSDKPT-RREDYTYARHVEWMRSWF----EQ---LDLTDVTLVCQDWGGLIGLRLAAEHPD 138 (302)
T ss_pred ----CCCEEEEEC-CCCCCCCCCCC-CcccCCHHHHHHHHHHHH----HH---cCCCCEEEEEEChHHHHHHHHHHhChh
Confidence 236799999 67999984211 111224455555554444 43 234589999999999988877754211
Q ss_pred hccCCCCCceeecceeeecCCC
Q 042842 165 QNKRVPVSKREKLHGVAIGNGL 186 (375)
Q Consensus 165 ~n~~~~~~~~inLkGi~IGNg~ 186 (375)
.++++++.++.
T Consensus 139 -----------~v~~lvl~~~~ 149 (302)
T PRK00870 139 -----------RFARLVVANTG 149 (302)
T ss_pred -----------heeEEEEeCCC
Confidence 27788877754
No 14
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.33 E-value=1.9e-05 Score=72.87 Aligned_cols=107 Identities=22% Similarity=0.138 Sum_probs=70.4
Q ss_pred CCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCCh
Q 042842 38 SQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQ 117 (375)
Q Consensus 38 ~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~ 117 (375)
.+.|+||++.|.+|.+..+..+.+ .+. +..+++.+| ..|.|.|..... ...+.
T Consensus 26 ~~~~~vv~~hG~~~~~~~~~~~~~-----------------~l~-------~~~~vi~~D-~~G~G~S~~~~~--~~~~~ 78 (278)
T TIGR03056 26 TAGPLLLLLHGTGASTHSWRDLMP-----------------PLA-------RSFRVVAPD-LPGHGFTRAPFR--FRFTL 78 (278)
T ss_pred CCCCeEEEEcCCCCCHHHHHHHHH-----------------HHh-------hCcEEEeec-CCCCCCCCCccc--cCCCH
Confidence 346899999999887666532221 121 236799999 579999853322 13455
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCc
Q 042842 118 SSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDP 189 (375)
Q Consensus 118 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp 189 (375)
+..++++.++++. +..++++|+|+|+||..+..+|.+.- -.++++++.++..++
T Consensus 79 ~~~~~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~p-----------~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 79 PSMAEDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDGP-----------VTPRMVVGINAALMP 132 (278)
T ss_pred HHHHHHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhCC-----------cccceEEEEcCcccc
Confidence 6667776665543 22457899999999987777764321 237788888886654
No 15
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.22 E-value=3.2e-06 Score=75.70 Aligned_cols=105 Identities=17% Similarity=0.270 Sum_probs=65.1
Q ss_pred CCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCChHH
Q 042842 40 TPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSS 119 (375)
Q Consensus 40 ~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~ 119 (375)
+|+||.+.|.+|.+..+-.+. + .+. +-.+++-+| ..|.|.|.... .....+.++
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~---~--------------~L~-------~~~~v~~~d-~~g~G~s~~~~-~~~~~~~~~ 54 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALI---E--------------LLG-------PHFRCLAID-LPGHGSSQSPD-EIERYDFEE 54 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHH---H--------------Hhc-------ccCeEEEEc-CCCCCCCCCCC-ccChhhHHH
Confidence 478999999888776653221 1 121 235789999 56999884321 111233444
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCC
Q 042842 120 VAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 120 ~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~i 187 (375)
.++++ +..+.+.. ..++++|+|+|+||..+..+|.+.-+ .++++++.++..
T Consensus 55 ~~~~~---~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~~-----------~v~~lil~~~~~ 105 (251)
T TIGR03695 55 AAQDI---LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYPE-----------RVQGLILESGSP 105 (251)
T ss_pred HHHHH---HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCch-----------heeeeEEecCCC
Confidence 44442 33333332 35689999999999988888875321 378888877653
No 16
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.18 E-value=5.2e-05 Score=70.47 Aligned_cols=33 Identities=12% Similarity=0.142 Sum_probs=30.0
Q ss_pred eCCeEEEEEcCCcccCCCCCcHHHHHHHHHHHc
Q 042842 332 FGNLSNAVVLGAGHLMPADQPLISQTMIEDWVL 364 (375)
Q Consensus 332 ~~~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~ 364 (375)
..+..++.|.+|||+++.++|+...++|..||.
T Consensus 249 ~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 249 MPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 346778999999999999999999999999995
No 17
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.08 E-value=9.4e-05 Score=66.26 Aligned_cols=103 Identities=19% Similarity=0.214 Sum_probs=64.0
Q ss_pred CCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCCh
Q 042842 38 SQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQ 117 (375)
Q Consensus 38 ~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~ 117 (375)
+.+|+||.+.|-++.+..+..+.+ .+ .+..+++-+| -.|.|.|... ....+.
T Consensus 11 ~~~~~li~~hg~~~~~~~~~~~~~-----------------~l-------~~~~~v~~~d-~~G~G~s~~~---~~~~~~ 62 (251)
T TIGR02427 11 DGAPVLVFINSLGTDLRMWDPVLP-----------------AL-------TPDFRVLRYD-KRGHGLSDAP---EGPYSI 62 (251)
T ss_pred CCCCeEEEEcCcccchhhHHHHHH-----------------Hh-------hcccEEEEec-CCCCCCCCCC---CCCCCH
Confidence 367999999886444444422221 11 1235899999 4789988422 123355
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCC
Q 042842 118 SSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGL 186 (375)
Q Consensus 118 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~ 186 (375)
++.++++.++++.+ ...+++|+|+|+||..+-.+|.+--+ .++++++.++.
T Consensus 63 ~~~~~~~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~~p~-----------~v~~li~~~~~ 113 (251)
T TIGR02427 63 EDLADDVLALLDHL-------GIERAVFCGLSLGGLIAQGLAARRPD-----------RVRALVLSNTA 113 (251)
T ss_pred HHHHHHHHHHHHHh-------CCCceEEEEeCchHHHHHHHHHHCHH-----------HhHHHhhccCc
Confidence 66677766655432 23579999999999988877764222 16677665543
No 18
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.02 E-value=0.00013 Score=66.89 Aligned_cols=95 Identities=15% Similarity=0.075 Sum_probs=62.0
Q ss_pred CCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCChHH
Q 042842 40 TPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSS 119 (375)
Q Consensus 40 ~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~ 119 (375)
.|.||.|.|.++++..+-.+.+ . +.+..+++.+| ..|.|.|... + ..+.++
T Consensus 13 ~~~ivllHG~~~~~~~w~~~~~-----------------~-------L~~~~~vi~~D-l~G~G~S~~~--~--~~~~~~ 63 (256)
T PRK10349 13 NVHLVLLHGWGLNAEVWRCIDE-----------------E-------LSSHFTLHLVD-LPGFGRSRGF--G--ALSLAD 63 (256)
T ss_pred CCeEEEECCCCCChhHHHHHHH-----------------H-------HhcCCEEEEec-CCCCCCCCCC--C--CCCHHH
Confidence 3569999998888877732221 1 23457899999 5699999532 1 234444
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCC
Q 042842 120 VAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNG 185 (375)
Q Consensus 120 ~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg 185 (375)
.++++. + +...+++|+|+|+||..+..+|.+-- -.++++++.|+
T Consensus 64 ~~~~l~----~-------~~~~~~~lvGhS~Gg~ia~~~a~~~p-----------~~v~~lili~~ 107 (256)
T PRK10349 64 MAEAVL----Q-------QAPDKAIWLGWSLGGLVASQIALTHP-----------ERVQALVTVAS 107 (256)
T ss_pred HHHHHH----h-------cCCCCeEEEEECHHHHHHHHHHHhCh-----------HhhheEEEecC
Confidence 444433 2 12357999999999998888775321 12788888776
No 19
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.99 E-value=0.0005 Score=66.91 Aligned_cols=104 Identities=13% Similarity=0.141 Sum_probs=65.6
Q ss_pred CCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCChH
Q 042842 39 QTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQS 118 (375)
Q Consensus 39 ~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~ 118 (375)
..|.||.|+|.++.+..+..+.+ .+ .+...++-+| ..|.|.|.... +...+.+
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~-----------------~L-------~~~~~via~D-l~G~G~S~~~~--~~~~~~~ 139 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIG-----------------VL-------AKNYTVYAID-LLGFGASDKPP--GFSYTME 139 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHH-----------------HH-------hcCCEEEEEC-CCCCCCCCCCC--CccccHH
Confidence 34778999999888777643321 11 1235789999 57999984321 1233555
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCC
Q 042842 119 SVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGL 186 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~ 186 (375)
..++++.++|.. +...+++|+|+|+||..+-.++..- .-. .++|+++.|+.
T Consensus 140 ~~a~~l~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~--~P~--------rV~~LVLi~~~ 190 (360)
T PLN02679 140 TWAELILDFLEE-------VVQKPTVLIGNSVGSLACVIAASES--TRD--------LVRGLVLLNCA 190 (360)
T ss_pred HHHHHHHHHHHH-------hcCCCeEEEEECHHHHHHHHHHHhc--Chh--------hcCEEEEECCc
Confidence 667776666653 2346899999999996654444211 111 27888888764
No 20
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.94 E-value=1.2e-05 Score=77.34 Aligned_cols=135 Identities=21% Similarity=0.255 Sum_probs=80.0
Q ss_pred eEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCc
Q 042842 22 AIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIG 101 (375)
Q Consensus 22 ~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~G 101 (375)
.-.||++++-+. .+|++|||||++.|| |.+.+.=|+.+.. ..+-+..-+...+|.+|-..-
T Consensus 105 ~~s~Wlvk~P~~-~~pk~DpVlIYlHGG-------GY~l~~~p~qi~~-----------L~~i~~~l~~~SILvLDYsLt 165 (374)
T PF10340_consen 105 SQSYWLVKAPNR-FKPKSDPVLIYLHGG-------GYFLGTTPSQIEF-----------LLNIYKLLPEVSILVLDYSLT 165 (374)
T ss_pred cceEEEEeCCcc-cCCCCCcEEEEEcCC-------eeEecCCHHHHHH-----------HHHHHHHcCCCeEEEEecccc
Confidence 345999986221 147889999999999 4555555554321 111111111238999995443
Q ss_pred cceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceee
Q 042842 102 TGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVA 181 (375)
Q Consensus 102 tGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~ 181 (375)
. | ......+|+ .-.++.+..+...+. ...+++.|.|+|-||+.+-++..++.+.++. .. =|+++
T Consensus 166 ~--~-~~~~~~yPt----QL~qlv~~Y~~Lv~~---~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~-----~~-Pk~~i 229 (374)
T PF10340_consen 166 S--S-DEHGHKYPT----QLRQLVATYDYLVES---EGNKNIILMGDSAGGNLALSFLQYLKKPNKL-----PY-PKSAI 229 (374)
T ss_pred c--c-ccCCCcCch----HHHHHHHHHHHHHhc---cCCCeEEEEecCccHHHHHHHHHHHhhcCCC-----CC-CceeE
Confidence 2 0 001112232 122333333333322 2346899999999999999999998775532 11 36899
Q ss_pred ecCCCCCccc
Q 042842 182 IGNGLTDPVS 191 (375)
Q Consensus 182 IGNg~idp~~ 191 (375)
+..||+++..
T Consensus 230 LISPWv~l~~ 239 (374)
T PF10340_consen 230 LISPWVNLVP 239 (374)
T ss_pred EECCCcCCcC
Confidence 9999999873
No 21
>PHA02857 monoglyceride lipase; Provisional
Probab=97.87 E-value=9.1e-05 Score=68.83 Aligned_cols=124 Identities=13% Similarity=0.181 Sum_probs=79.5
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCcccc-ccccceecC
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNR-ISGIVFLDN 98 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~-~an~l~iDq 98 (375)
+..|++.+++... ..+|+||.+.|..++|..+-.+.+ . +.+ -..++-+|
T Consensus 10 g~~l~~~~~~~~~-----~~~~~v~llHG~~~~~~~~~~~~~-----------------~-------l~~~g~~via~D- 59 (276)
T PHA02857 10 NDYIYCKYWKPIT-----YPKALVFISHGAGEHSGRYEELAE-----------------N-------ISSLGILVFSHD- 59 (276)
T ss_pred CCEEEEEeccCCC-----CCCEEEEEeCCCccccchHHHHHH-----------------H-------HHhCCCEEEEcc-
Confidence 6789998887532 346999999999777666533221 1 222 25688899
Q ss_pred CCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecc
Q 042842 99 PIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLH 178 (375)
Q Consensus 99 P~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLk 178 (375)
..|.|.|.... ....+.....+|+..++..+-+. +...+++|+|+|.||..+..+|.+ . + -+++
T Consensus 60 ~~G~G~S~~~~--~~~~~~~~~~~d~~~~l~~~~~~---~~~~~~~lvG~S~GG~ia~~~a~~---~-p-------~~i~ 123 (276)
T PHA02857 60 HIGHGRSNGEK--MMIDDFGVYVRDVVQHVVTIKST---YPGVPVFLLGHSMGATISILAAYK---N-P-------NLFT 123 (276)
T ss_pred CCCCCCCCCcc--CCcCCHHHHHHHHHHHHHHHHhh---CCCCCEEEEEcCchHHHHHHHHHh---C-c-------cccc
Confidence 79999985321 11123334456666666544333 335789999999999866665532 1 1 1389
Q ss_pred eeeecCCCCCc
Q 042842 179 GVAIGNGLTDP 189 (375)
Q Consensus 179 Gi~IGNg~idp 189 (375)
|+++.++.+++
T Consensus 124 ~lil~~p~~~~ 134 (276)
T PHA02857 124 AMILMSPLVNA 134 (276)
T ss_pred eEEEecccccc
Confidence 99999987653
No 22
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=97.86 E-value=7e-05 Score=71.06 Aligned_cols=127 Identities=18% Similarity=0.217 Sum_probs=76.8
Q ss_pred ceeeeecCCCCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccc
Q 042842 9 RSGYLPVSPATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWN 88 (375)
Q Consensus 9 ~sGy~~v~~~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~ 88 (375)
-.+|+.+.+ +..++|.-.. .+. .|-||.+.||||.++..... . .+. .
T Consensus 5 ~~~~~~~~~--~~~l~y~~~g------~~~-~~~lvllHG~~~~~~~~~~~----~--------------~~~------~ 51 (306)
T TIGR01249 5 VSGYLNVSD--NHQLYYEQSG------NPD-GKPVVFLHGGPGSGTDPGCR----R--------------FFD------P 51 (306)
T ss_pred cCCeEEcCC--CcEEEEEECc------CCC-CCEEEEECCCCCCCCCHHHH----h--------------ccC------c
Confidence 368999875 6778876432 122 34568899999875432100 0 010 1
Q ss_pred cccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccC
Q 042842 89 RISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKR 168 (375)
Q Consensus 89 ~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~ 168 (375)
+..+|+-+|. .|.|.|..... ....+.++.++++.. +.+. +...+++++|+||||..+-.++.+--+
T Consensus 52 ~~~~vi~~D~-~G~G~S~~~~~-~~~~~~~~~~~dl~~----l~~~---l~~~~~~lvG~S~GG~ia~~~a~~~p~---- 118 (306)
T TIGR01249 52 ETYRIVLFDQ-RGCGKSTPHAC-LEENTTWDLVADIEK----LREK---LGIKNWLVFGGSWGSTLALAYAQTHPE---- 118 (306)
T ss_pred cCCEEEEECC-CCCCCCCCCCC-cccCCHHHHHHHHHH----HHHH---cCCCCEEEEEECHHHHHHHHHHHHChH----
Confidence 3468999995 69999963221 122344445555543 3333 223579999999999877777754322
Q ss_pred CCCCceeecceeeecCCCCC
Q 042842 169 VPVSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 169 ~~~~~~inLkGi~IGNg~id 188 (375)
.++++++.+..+.
T Consensus 119 -------~v~~lvl~~~~~~ 131 (306)
T TIGR01249 119 -------VVTGLVLRGIFLL 131 (306)
T ss_pred -------hhhhheeeccccC
Confidence 2778888776654
No 23
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.85 E-value=0.00018 Score=64.22 Aligned_cols=32 Identities=6% Similarity=-0.096 Sum_probs=28.8
Q ss_pred eCCeEEEEEcCCcccCCCCCcHHHHHHHHHHH
Q 042842 332 FGNLSNAVVLGAGHLMPADQPLISQTMIEDWV 363 (375)
Q Consensus 332 ~~~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl 363 (375)
..+-++..+.++||+++.++|+...+.|.+||
T Consensus 214 ~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 214 APHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 34677889999999999999999999999986
No 24
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=97.77 E-value=0.00014 Score=68.40 Aligned_cols=124 Identities=16% Similarity=0.089 Sum_probs=81.0
Q ss_pred eeeeecCCCCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCcccc
Q 042842 10 SGYLPVSPATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNR 89 (375)
Q Consensus 10 sGy~~v~~~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~ 89 (375)
+=|++++ +.+++|.-. . + ..|.||+|+|.+++|.++..+.+ .+ .+
T Consensus 10 ~~~~~~~---~~~i~y~~~---G----~-~~~~vlllHG~~~~~~~w~~~~~-----------------~L-------~~ 54 (294)
T PLN02824 10 TRTWRWK---GYNIRYQRA---G----T-SGPALVLVHGFGGNADHWRKNTP-----------------VL-------AK 54 (294)
T ss_pred CceEEEc---CeEEEEEEc---C----C-CCCeEEEECCCCCChhHHHHHHH-----------------HH-------Hh
Confidence 4477774 456665332 1 1 24789999999999888754332 12 23
Q ss_pred ccccceecCCCccceeeccCCCC----CCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHh
Q 042842 90 ISGIVFLDNPIGTGLSFAVTNDE----IPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 90 ~an~l~iDqP~GtGfS~~~~~~~----~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
..+++.+| ..|.|.|...+... ...+.++.|+++..+|... ...+++|+|+|.||..+-.+|.+--+
T Consensus 55 ~~~vi~~D-lpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~- 125 (294)
T PLN02824 55 SHRVYAID-LLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPE- 125 (294)
T ss_pred CCeEEEEc-CCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChh-
Confidence 45899999 69999996432211 1234555666666555533 34689999999999998877764322
Q ss_pred ccCCCCCceeecceeeecCCCC
Q 042842 166 NKRVPVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 166 n~~~~~~~~inLkGi~IGNg~i 187 (375)
.++++++.|+..
T Consensus 126 ----------~v~~lili~~~~ 137 (294)
T PLN02824 126 ----------LVRGVMLINISL 137 (294)
T ss_pred ----------heeEEEEECCCc
Confidence 288999888754
No 25
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=97.74 E-value=0.00017 Score=69.71 Aligned_cols=126 Identities=14% Similarity=0.221 Sum_probs=78.2
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHh-HhhhcccCcEEcCCCCCcccccccccCCCcccc-ccccceec
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSML-GNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNR-ISGIVFLD 97 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~-g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~-~an~l~iD 97 (375)
+..+|+..+...+ .+.+|+||++.|..+.++.. -.+. + .+.+ -.+|+-+|
T Consensus 71 g~~l~~~~~~p~~----~~~~~~iv~lHG~~~~~~~~~~~~~---~---------------------~l~~~g~~v~~~D 122 (349)
T PLN02385 71 GVEIFSKSWLPEN----SRPKAAVCFCHGYGDTCTFFFEGIA---R---------------------KIASSGYGVFAMD 122 (349)
T ss_pred CCEEEEEEEecCC----CCCCeEEEEECCCCCccchHHHHHH---H---------------------HHHhCCCEEEEec
Confidence 6678877665321 13579999999975554432 1111 1 1111 25788999
Q ss_pred CCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeec
Q 042842 98 NPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKL 177 (375)
Q Consensus 98 qP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inL 177 (375)
. .|.|.|... ..+..+.++.++|+..+++.. ...+++...+++|+|+|+||..+-.++.+ . . -.+
T Consensus 123 ~-~G~G~S~~~--~~~~~~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~---~-p-------~~v 187 (349)
T PLN02385 123 Y-PGFGLSEGL--HGYIPSFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLK---Q-P-------NAW 187 (349)
T ss_pred C-CCCCCCCCC--CCCcCCHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHh---C-c-------chh
Confidence 6 699988532 123345666777877766543 33334556689999999999877665532 1 1 127
Q ss_pred ceeeecCCCCC
Q 042842 178 HGVAIGNGLTD 188 (375)
Q Consensus 178 kGi~IGNg~id 188 (375)
+|+++.++...
T Consensus 188 ~glVLi~p~~~ 198 (349)
T PLN02385 188 DGAILVAPMCK 198 (349)
T ss_pred hheeEeccccc
Confidence 89998887653
No 26
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=97.71 E-value=0.00016 Score=69.28 Aligned_cols=139 Identities=17% Similarity=0.181 Sum_probs=84.0
Q ss_pred CcceeeeecCCCCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCc
Q 042842 7 PTRSGYLPVSPATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGS 86 (375)
Q Consensus 7 ~~~sGy~~v~~~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~s 86 (375)
+...+++...+ +..++|+.+.... ....+|+||++.|..+.++ + .+.+ + ...
T Consensus 31 ~~~~~~~~~~d--g~~l~~~~~~~~~---~~~~~~~VvllHG~~~~~~-~-~~~~------------------~---~~~ 82 (330)
T PLN02298 31 KGSKSFFTSPR--GLSLFTRSWLPSS---SSPPRALIFMVHGYGNDIS-W-TFQS------------------T---AIF 82 (330)
T ss_pred ccccceEEcCC--CCEEEEEEEecCC---CCCCceEEEEEcCCCCCcc-e-ehhH------------------H---HHH
Confidence 33466777654 6788887664321 1124789999999843222 1 0000 0 001
Q ss_pred ccc-ccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHh
Q 042842 87 WNR-ISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 87 W~~-~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
+.+ -.+|+-+| -.|.|.|... .....+.+..++|+..+++.... ..++...+++|+|+|+||..+-.++. +
T Consensus 83 L~~~Gy~V~~~D-~rGhG~S~~~--~~~~~~~~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~~~a~----~ 154 (330)
T PLN02298 83 LAQMGFACFALD-LEGHGRSEGL--RAYVPNVDLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICLLIHL----A 154 (330)
T ss_pred HHhCCCEEEEec-CCCCCCCCCc--cccCCCHHHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHHHHHh----c
Confidence 223 36899999 5899998422 12234556678888777764432 22334568999999999987765543 2
Q ss_pred ccCCCCCceeecceeeecCCCCC
Q 042842 166 NKRVPVSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 166 n~~~~~~~~inLkGi~IGNg~id 188 (375)
.. -.++|+++.+++.+
T Consensus 155 ~p-------~~v~~lvl~~~~~~ 170 (330)
T PLN02298 155 NP-------EGFDGAVLVAPMCK 170 (330)
T ss_pred Cc-------ccceeEEEeccccc
Confidence 11 13889999888764
No 27
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.57 E-value=0.00066 Score=65.80 Aligned_cols=103 Identities=15% Similarity=0.091 Sum_probs=65.4
Q ss_pred CCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCCh
Q 042842 38 SQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQ 117 (375)
Q Consensus 38 ~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~ 117 (375)
.+.|.+|+++|.+|++..+..+.+ .+. +..+++-+| ..|.|.|-... ...+.
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~-----------------~l~-------~~~~v~~~d-~~g~G~s~~~~---~~~~~ 180 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHA-----------------ALA-------AGRPVIALD-LPGHGASSKAV---GAGSL 180 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHH-----------------HHh-------cCCEEEEEc-CCCCCCCCCCC---CCCCH
Confidence 346889999999888776643332 111 125789999 57999883211 12345
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCC
Q 042842 118 SSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGL 186 (375)
Q Consensus 118 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~ 186 (375)
++.++++..++ +. +...+++|.|+|+||..+..+|..-- -.++++++.++.
T Consensus 181 ~~~~~~~~~~~----~~---~~~~~~~lvG~S~Gg~~a~~~a~~~~-----------~~v~~lv~~~~~ 231 (371)
T PRK14875 181 DELAAAVLAFL----DA---LGIERAHLVGHSMGGAVALRLAARAP-----------QRVASLTLIAPA 231 (371)
T ss_pred HHHHHHHHHHH----Hh---cCCccEEEEeechHHHHHHHHHHhCc-----------hheeEEEEECcC
Confidence 55555554444 33 33457999999999999888776421 126677766554
No 28
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.56 E-value=0.0032 Score=72.60 Aligned_cols=106 Identities=19% Similarity=0.220 Sum_probs=68.3
Q ss_pred CCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCC-----CC
Q 042842 38 SQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTN-----DE 112 (375)
Q Consensus 38 ~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~-----~~ 112 (375)
++.|.||+|+|.+|.+..+..+.+ .+ .+..+++.+| ..|.|.|..... ..
T Consensus 1369 ~~~~~vVllHG~~~s~~~w~~~~~-----------------~L-------~~~~rVi~~D-l~G~G~S~~~~~~~~~~~~ 1423 (1655)
T PLN02980 1369 AEGSVVLFLHGFLGTGEDWIPIMK-----------------AI-------SGSARCISID-LPGHGGSKIQNHAKETQTE 1423 (1655)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHH-----------------HH-------hCCCEEEEEc-CCCCCCCCCcccccccccc
Confidence 457899999999998876632221 12 1235799999 569998853221 01
Q ss_pred CCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCC
Q 042842 113 IPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGL 186 (375)
Q Consensus 113 ~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~ 186 (375)
...+.+..++++..+++. +...+++|+|+|+||..+-.++.+.-+ .++++++.++.
T Consensus 1424 ~~~si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~-----------~V~~lVlis~~ 1479 (1655)
T PLN02980 1424 PTLSVELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSD-----------KIEGAVIISGS 1479 (1655)
T ss_pred ccCCHHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChH-----------hhCEEEEECCC
Confidence 123455566666555543 234689999999999988877754322 27788776653
No 29
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.49 E-value=0.00019 Score=65.03 Aligned_cols=100 Identities=23% Similarity=0.282 Sum_probs=66.9
Q ss_pred CCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCChHH
Q 042842 40 TPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSS 119 (375)
Q Consensus 40 ~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~ 119 (375)
.|.||++.|.+|++..+-.+.+ .+ +..+++-+| ..|.|.|.... ..+.++
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~-----------------~l--------~~~~vi~~D-~~G~G~S~~~~----~~~~~~ 51 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGE-----------------AL--------PDYPRLYID-LPGHGGSAAIS----VDGFAD 51 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHH-----------------Hc--------CCCCEEEec-CCCCCCCCCcc----ccCHHH
Confidence 5889999999998877643321 11 136899999 79999995221 225555
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCC
Q 042842 120 VAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGL 186 (375)
Q Consensus 120 ~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~ 186 (375)
.++++.++|. . +...+++|+|+|+||..+-.+|.+.-.. .+++++|.++.
T Consensus 52 ~~~~l~~~l~----~---~~~~~~~lvG~S~Gg~va~~~a~~~~~~----------~v~~lvl~~~~ 101 (242)
T PRK11126 52 VSRLLSQTLQ----S---YNILPYWLVGYSLGGRIAMYYACQGLAG----------GLCGLIVEGGN 101 (242)
T ss_pred HHHHHHHHHH----H---cCCCCeEEEEECHHHHHHHHHHHhCCcc----------cccEEEEeCCC
Confidence 5666555554 2 3457999999999998887777642110 17788877654
No 30
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=97.45 E-value=8.3e-05 Score=65.38 Aligned_cols=104 Identities=19% Similarity=0.206 Sum_probs=68.2
Q ss_pred EEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCChHHHHH
Q 042842 43 LLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAK 122 (375)
Q Consensus 43 ~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~ 122 (375)
||.+.|.++.+..+..+.+ .+. +-.+++.+| ..|.|.|..... ....+.++.++
T Consensus 1 vv~~hG~~~~~~~~~~~~~-----------------~l~-------~~~~v~~~d-~~G~G~s~~~~~-~~~~~~~~~~~ 54 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAE-----------------ALA-------RGYRVIAFD-LPGHGRSDPPPD-YSPYSIEDYAE 54 (228)
T ss_dssp EEEE-STTTTGGGGHHHHH-----------------HHH-------TTSEEEEEE-CTTSTTSSSHSS-GSGGSHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHH-----------------HHh-------CCCEEEEEe-cCCccccccccc-cCCcchhhhhh
Confidence 6899999888766643332 121 345799999 569999964332 11334455556
Q ss_pred HHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCcc
Q 042842 123 HLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 123 ~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~ 190 (375)
++.++| +.. ...+++|+|+|+||..+-.++.+.-+ .++|+++.++.....
T Consensus 55 ~l~~~l----~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~-----------~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 55 DLAELL----DAL---GIKKVILVGHSMGGMIALRLAARYPD-----------RVKGLVLLSPPPPLP 104 (228)
T ss_dssp HHHHHH----HHT---TTSSEEEEEETHHHHHHHHHHHHSGG-----------GEEEEEEESESSSHH
T ss_pred hhhhcc----ccc---cccccccccccccccccccccccccc-----------ccccceeeccccccc
Confidence 655544 433 22689999999999988888855322 389999998887543
No 31
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.44 E-value=0.00096 Score=62.06 Aligned_cols=117 Identities=17% Similarity=0.167 Sum_probs=73.9
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCC
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNP 99 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP 99 (375)
+..+.|+..+.. ...|.||+++|-++.+..+..+.+ .+ .+..+++-+| .
T Consensus 11 ~~~~~~~~~~~~------~~~~plvllHG~~~~~~~w~~~~~-----------------~L-------~~~~~vi~~D-l 59 (276)
T TIGR02240 11 GQSIRTAVRPGK------EGLTPLLIFNGIGANLELVFPFIE-----------------AL-------DPDLEVIAFD-V 59 (276)
T ss_pred CcEEEEEEecCC------CCCCcEEEEeCCCcchHHHHHHHH-----------------Hh-------ccCceEEEEC-C
Confidence 457888765321 234678999997666665532221 12 1346899999 6
Q ss_pred CccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecce
Q 042842 100 IGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHG 179 (375)
Q Consensus 100 ~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkG 179 (375)
.|.|.|-.. . ...+.+..++++.+++.. +.-.+++|+|+|+||..+-.+|.+--+ .+++
T Consensus 60 ~G~G~S~~~-~--~~~~~~~~~~~~~~~i~~-------l~~~~~~LvG~S~GG~va~~~a~~~p~-----------~v~~ 118 (276)
T TIGR02240 60 PGVGGSSTP-R--HPYRFPGLAKLAARMLDY-------LDYGQVNAIGVSWGGALAQQFAHDYPE-----------RCKK 118 (276)
T ss_pred CCCCCCCCC-C--CcCcHHHHHHHHHHHHHH-------hCcCceEEEEECHHHHHHHHHHHHCHH-----------Hhhh
Confidence 899999422 1 123444455555544443 223579999999999987777754322 2899
Q ss_pred eeecCCCCC
Q 042842 180 VAIGNGLTD 188 (375)
Q Consensus 180 i~IGNg~id 188 (375)
+++.|+...
T Consensus 119 lvl~~~~~~ 127 (276)
T TIGR02240 119 LILAATAAG 127 (276)
T ss_pred eEEeccCCc
Confidence 999988754
No 32
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.29 E-value=0.00032 Score=73.22 Aligned_cols=132 Identities=20% Similarity=0.255 Sum_probs=81.0
Q ss_pred CceEEEEEEEecCCCCCC-CCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCc-cccccccceec
Q 042842 20 GSAIFYAFYEAQTPTSPL-SQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGS-WNRISGIVFLD 97 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p-~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~s-W~~~an~l~iD 97 (375)
+..+..|++.-.+. +| ++-|+|+++.||| +++.+ +... .+... +.+-..||+++
T Consensus 375 G~~i~~~l~~P~~~--~~~k~yP~i~~~hGGP--~~~~~-------~~~~-------------~~~q~~~~~G~~V~~~n 430 (620)
T COG1506 375 GETIHGWLYKPPGF--DPRKKYPLIVYIHGGP--SAQVG-------YSFN-------------PEIQVLASAGYAVLAPN 430 (620)
T ss_pred CCEEEEEEecCCCC--CCCCCCCEEEEeCCCC--ccccc-------cccc-------------hhhHHHhcCCeEEEEeC
Confidence 66899999876543 23 2359999999999 44443 1111 11111 34556789999
Q ss_pred CCCccceeec--cCC-CCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCce
Q 042842 98 NPIGTGLSFA--VTN-DEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKR 174 (375)
Q Consensus 98 qP~GtGfS~~--~~~-~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~ 174 (375)
.---+||+.. ... .++- ....+|+..++. |+...|..-..++.|+|.||||...-.++. +..
T Consensus 431 ~RGS~GyG~~F~~~~~~~~g---~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~----~~~------- 495 (620)
T COG1506 431 YRGSTGYGREFADAIRGDWG---GVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAAT----KTP------- 495 (620)
T ss_pred CCCCCccHHHHHHhhhhccC---CccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHh----cCc-------
Confidence 4334454421 111 0111 124567888888 889998776788999999999976544443 321
Q ss_pred eecceeeecCCCCCccc
Q 042842 175 EKLHGVAIGNGLTDPVS 191 (375)
Q Consensus 175 inLkGi~IGNg~idp~~ 191 (375)
-+|..+...+.++...
T Consensus 496 -~f~a~~~~~~~~~~~~ 511 (620)
T COG1506 496 -RFKAAVAVAGGVDWLL 511 (620)
T ss_pred -hhheEEeccCcchhhh
Confidence 2777777777666443
No 33
>PRK03592 haloalkane dehalogenase; Provisional
Probab=97.29 E-value=0.00094 Score=62.72 Aligned_cols=104 Identities=17% Similarity=0.204 Sum_probs=70.1
Q ss_pred CCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCChHH
Q 042842 40 TPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSS 119 (375)
Q Consensus 40 ~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~ 119 (375)
.|.||+++|.|+.+..+-.+.+ .+ .+...++-+| ..|.|.|.... . ..+...
T Consensus 27 g~~vvllHG~~~~~~~w~~~~~-----------------~L-------~~~~~via~D-~~G~G~S~~~~-~--~~~~~~ 78 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLWRNIIP-----------------HL-------AGLGRCLAPD-LIGMGASDKPD-I--DYTFAD 78 (295)
T ss_pred CCEEEEECCCCCCHHHHHHHHH-----------------HH-------hhCCEEEEEc-CCCCCCCCCCC-C--CCCHHH
Confidence 4789999999988887743321 11 2234799999 57999995322 1 235555
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCc
Q 042842 120 VAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDP 189 (375)
Q Consensus 120 ~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp 189 (375)
.|+++..+++. +...+++|+|+|.||..+-.+|.+--+ .++++++.|+.+.|
T Consensus 79 ~a~dl~~ll~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~p~-----------~v~~lil~~~~~~~ 130 (295)
T PRK03592 79 HARYLDAWFDA-------LGLDDVVLVGHDWGSALGFDWAARHPD-----------RVRGIAFMEAIVRP 130 (295)
T ss_pred HHHHHHHHHHH-------hCCCCeEEEEECHHHHHHHHHHHhChh-----------heeEEEEECCCCCC
Confidence 66666555543 234689999999999888777754322 28899999986544
No 34
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.25 E-value=0.0011 Score=65.33 Aligned_cols=127 Identities=18% Similarity=0.201 Sum_probs=81.2
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCC
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNP 99 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP 99 (375)
+..+|++.+.... .+.+|+||+++|.++.+..+-.+.+ .+.. +-.+++-+| -
T Consensus 120 ~~~l~~~~~~p~~----~~~~~~Vl~lHG~~~~~~~~~~~a~-----------------~L~~------~Gy~V~~~D-~ 171 (395)
T PLN02652 120 RNALFCRSWAPAA----GEMRGILIIIHGLNEHSGRYLHFAK-----------------QLTS------CGFGVYAMD-W 171 (395)
T ss_pred CCEEEEEEecCCC----CCCceEEEEECCchHHHHHHHHHHH-----------------HHHH------CCCEEEEeC-C
Confidence 5678888876532 2357899999998776554422221 1111 124788899 5
Q ss_pred CccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecce
Q 042842 100 IGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHG 179 (375)
Q Consensus 100 ~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkG 179 (375)
.|.|.|... ..+..+.+..++|+..+++..-..+| ..+++|+|+|+||..+..++. . .. ..-.++|
T Consensus 172 rGhG~S~~~--~~~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~-p~----~~~~v~g 237 (395)
T PLN02652 172 IGHGGSDGL--HGYVPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----Y-PS----IEDKLEG 237 (395)
T ss_pred CCCCCCCCC--CCCCcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----c-cC----cccccce
Confidence 899988532 22334556667787777776555544 458999999999987765442 1 10 0123889
Q ss_pred eeecCCCCC
Q 042842 180 VAIGNGLTD 188 (375)
Q Consensus 180 i~IGNg~id 188 (375)
+++.++++.
T Consensus 238 lVL~sP~l~ 246 (395)
T PLN02652 238 IVLTSPALR 246 (395)
T ss_pred EEEECcccc
Confidence 999888764
No 35
>PRK10749 lysophospholipase L2; Provisional
Probab=97.23 E-value=0.0013 Score=63.10 Aligned_cols=133 Identities=13% Similarity=0.071 Sum_probs=80.8
Q ss_pred eeeeecCCCCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCcccc
Q 042842 10 SGYLPVSPATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNR 89 (375)
Q Consensus 10 sGy~~v~~~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~ 89 (375)
++++...+ +..++|+.+... ..+|+||.+.|-.+.+..+.-+. + .+.. +
T Consensus 32 ~~~~~~~~--g~~l~~~~~~~~------~~~~~vll~HG~~~~~~~y~~~~---~--------------~l~~------~ 80 (330)
T PRK10749 32 EAEFTGVD--DIPIRFVRFRAP------HHDRVVVICPGRIESYVKYAELA---Y--------------DLFH------L 80 (330)
T ss_pred ceEEEcCC--CCEEEEEEccCC------CCCcEEEEECCccchHHHHHHHH---H--------------HHHH------C
Confidence 34444333 567888877532 24678999999755544332211 1 0111 2
Q ss_pred ccccceecCCCccceeeccCCC---CCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhc
Q 042842 90 ISGIVFLDNPIGTGLSFAVTND---EIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQN 166 (375)
Q Consensus 90 ~an~l~iDqP~GtGfS~~~~~~---~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n 166 (375)
-.+++-+| ..|.|.|...... ....+.++.++|+..+++.....+ ...+++|+|+|+||..+-.++.+ ..
T Consensus 81 g~~v~~~D-~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~l~GhSmGG~ia~~~a~~---~p 153 (330)
T PRK10749 81 GYDVLIID-HRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPG---PYRKRYALAHSMGGAILTLFLQR---HP 153 (330)
T ss_pred CCeEEEEc-CCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcC---CCCCeEEEEEcHHHHHHHHHHHh---CC
Confidence 24688899 5799998532111 112355667777777776654432 35789999999999877666643 11
Q ss_pred cCCCCCceeecceeeecCCCCC
Q 042842 167 KRVPVSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 167 ~~~~~~~~inLkGi~IGNg~id 188 (375)
-.++|+++.++...
T Consensus 154 --------~~v~~lvl~~p~~~ 167 (330)
T PRK10749 154 --------GVFDAIALCAPMFG 167 (330)
T ss_pred --------CCcceEEEECchhc
Confidence 12789999888753
No 36
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.21 E-value=0.0029 Score=62.52 Aligned_cols=109 Identities=12% Similarity=0.145 Sum_probs=68.2
Q ss_pred CCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCCh
Q 042842 38 SQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQ 117 (375)
Q Consensus 38 ~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~ 117 (375)
...|.||.|+|.++.+..+.... . .+ .+..+|+-+| ..|.|.|.... ....+.
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~-------~----------~L-------~~~~~vi~~D-~rG~G~S~~~~--~~~~~~ 155 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNF-------D----------AL-------ASRFRVIAID-QLGWGGSSRPD--FTCKST 155 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHH-------H----------HH-------HhCCEEEEEC-CCCCCCCCCCC--cccccH
Confidence 35799999999977665542111 0 12 2336799999 57999884211 111223
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCC
Q 042842 118 SSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 118 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~i 187 (375)
+++.+.+.+.+..|.+.. ...+++|+|+|+||..+-.+|.+-- -.++++++.++..
T Consensus 156 ~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p-----------~~v~~lvl~~p~~ 211 (402)
T PLN02894 156 EETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHP-----------EHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCc-----------hhhcEEEEECCcc
Confidence 344445666666776543 2358999999999988777665321 1278888877653
No 37
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.21 E-value=0.00083 Score=66.66 Aligned_cols=79 Identities=15% Similarity=0.214 Sum_probs=53.7
Q ss_pred cccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCC
Q 042842 91 SGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVP 170 (375)
Q Consensus 91 an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~ 170 (375)
.+||-+|.| |.|.|.... ...+ ...+...+.+++...|.....++.|+|.|+||.+++.+|..--+
T Consensus 223 y~vl~~D~p-G~G~s~~~~---~~~d----~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~------ 288 (414)
T PRK05077 223 IAMLTIDMP-SVGFSSKWK---LTQD----SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP------ 288 (414)
T ss_pred CEEEEECCC-CCCCCCCCC---cccc----HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc------
Confidence 578999977 999984211 1111 12223455667766776666889999999999999988853211
Q ss_pred CCceeecceeeecCCCCC
Q 042842 171 VSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 171 ~~~~inLkGi~IGNg~id 188 (375)
.++++++.+|.++
T Consensus 289 -----ri~a~V~~~~~~~ 301 (414)
T PRK05077 289 -----RLKAVACLGPVVH 301 (414)
T ss_pred -----CceEEEEECCccc
Confidence 2888888887765
No 38
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=97.20 E-value=0.0043 Score=58.39 Aligned_cols=136 Identities=15% Similarity=0.158 Sum_probs=81.1
Q ss_pred ceeeeecCCCCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccc
Q 042842 9 RSGYLPVSPATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWN 88 (375)
Q Consensus 9 ~sGy~~v~~~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~ 88 (375)
..+|+.+. .+++++.+.- +...|++|.|.|=|=.+=.+ ..... .+..
T Consensus 23 ~hk~~~~~-----gI~~h~~e~g-----~~~gP~illlHGfPe~wysw-----------r~q~~------~la~------ 69 (322)
T KOG4178|consen 23 SHKFVTYK-----GIRLHYVEGG-----PGDGPIVLLLHGFPESWYSW-----------RHQIP------GLAS------ 69 (322)
T ss_pred ceeeEEEc-----cEEEEEEeec-----CCCCCEEEEEccCCccchhh-----------hhhhh------hhhh------
Confidence 34566652 2888888762 56899999999977653322 00000 1111
Q ss_pred cccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccC
Q 042842 89 RISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKR 168 (375)
Q Consensus 89 ~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~ 168 (375)
.-..++.+| -.|-|+|...... ..-+....+.|+ ..+++. +..+.+++.|++||+..+=.++...-+..+
T Consensus 70 ~~~rviA~D-lrGyG~Sd~P~~~-~~Yt~~~l~~di----~~lld~---Lg~~k~~lvgHDwGaivaw~la~~~Perv~- 139 (322)
T KOG4178|consen 70 RGYRVIAPD-LRGYGFSDAPPHI-SEYTIDELVGDI----VALLDH---LGLKKAFLVGHDWGAIVAWRLALFYPERVD- 139 (322)
T ss_pred cceEEEecC-CCCCCCCCCCCCc-ceeeHHHHHHHH----HHHHHH---hccceeEEEeccchhHHHHHHHHhChhhcc-
Confidence 114688899 5999999543220 112334445554 444443 346789999999999988888876655422
Q ss_pred CCCCceeecceeeecCCCCCcccc
Q 042842 169 VPVSKREKLHGVAIGNGLTDPVSQ 192 (375)
Q Consensus 169 ~~~~~~inLkGi~IGNg~idp~~q 192 (375)
..+++.+... |+..+|...
T Consensus 140 ----~lv~~nv~~~-~p~~~~~~~ 158 (322)
T KOG4178|consen 140 ----GLVTLNVPFP-NPKLKPLDS 158 (322)
T ss_pred ----eEEEecCCCC-Ccccchhhh
Confidence 2344444444 666666553
No 39
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.99 E-value=0.023 Score=52.26 Aligned_cols=91 Identities=24% Similarity=0.320 Sum_probs=63.3
Q ss_pred CCCCEEEEecCCCChhHHh-Hhhh-cccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCC
Q 042842 38 SQTPLLLWLQGGPGCSSML-GNFL-EVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPR 115 (375)
Q Consensus 38 ~~~Pl~lwl~GGPG~Ss~~-g~f~-e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~ 115 (375)
..-|+++.+.|| |.|.|. +.|. |+ . +...+ -++=+| ..|.|-|...+..+ -
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~el-----~----------s~~~~--------r~~a~D-lRgHGeTk~~~e~d--l 124 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFASEL-----K----------SKIRC--------RCLALD-LRGHGETKVENEDD--L 124 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHHHH-----H----------hhcce--------eEEEee-ccccCccccCChhh--c
Confidence 357999999998 877764 4333 21 0 11111 136788 79999887665544 5
Q ss_pred ChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHH
Q 042842 116 NQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIG 159 (375)
Q Consensus 116 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a 159 (375)
+.+..++|+...++.+|..- ..++.|+|+|.||..+.+.|
T Consensus 125 S~eT~~KD~~~~i~~~fge~----~~~iilVGHSmGGaIav~~a 164 (343)
T KOG2564|consen 125 SLETMSKDFGAVIKELFGEL----PPQIILVGHSMGGAIAVHTA 164 (343)
T ss_pred CHHHHHHHHHHHHHHHhccC----CCceEEEeccccchhhhhhh
Confidence 66778999998888887433 34699999999998875555
No 40
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.94 E-value=0.0032 Score=59.62 Aligned_cols=85 Identities=13% Similarity=0.193 Sum_probs=60.8
Q ss_pred ccccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhcc
Q 042842 88 NRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNK 167 (375)
Q Consensus 88 ~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~ 167 (375)
.+.-||-.|| +.|-|.|-.. ..+.+.+.+-+.+.+-+.+|..... -.+.+|.|||+||..+...|.+=-++
T Consensus 114 a~~~~vyaiD-llG~G~SSRP---~F~~d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPer-- 184 (365)
T KOG4409|consen 114 AKIRNVYAID-LLGFGRSSRP---KFSIDPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPER-- 184 (365)
T ss_pred hhcCceEEec-ccCCCCCCCC---CCCCCcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChHh--
Confidence 3467899999 6899999432 2444444555688999999998652 35899999999999887766443332
Q ss_pred CCCCCceeecceeeecCCCCCcc
Q 042842 168 RVPVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 168 ~~~~~~~inLkGi~IGNg~idp~ 190 (375)
++-++|.+||--|.
T Consensus 185 ---------V~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 185 ---------VEKLILVSPWGFPE 198 (365)
T ss_pred ---------hceEEEeccccccc
Confidence 66788888875443
No 41
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=96.92 E-value=0.0072 Score=59.32 Aligned_cols=107 Identities=15% Similarity=0.184 Sum_probs=67.5
Q ss_pred CCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCC-CCCCC
Q 042842 38 SQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTND-EIPRN 116 (375)
Q Consensus 38 ~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~-~~~~~ 116 (375)
...|.||.|.|.|+.+..+-.+.+ .+ .+..+|+-+| ..|.|.|...... ....+
T Consensus 125 ~~~~~ivllHG~~~~~~~w~~~~~-----------------~L-------~~~~~Via~D-lpG~G~S~~p~~~~~~~ys 179 (383)
T PLN03084 125 NNNPPVLLIHGFPSQAYSYRKVLP-----------------VL-------SKNYHAIAFD-WLGFGFSDKPQPGYGFNYT 179 (383)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHH-----------------HH-------hcCCEEEEEC-CCCCCCCCCCcccccccCC
Confidence 356899999999887766633221 12 1236899999 6899999533211 11235
Q ss_pred hHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCC
Q 042842 117 QSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 117 ~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~i 187 (375)
.++.++++..+++.. ...+++|+|+|+||..+-.+|. +.. -.++++++.|+..
T Consensus 180 ~~~~a~~l~~~i~~l-------~~~~~~LvG~s~GG~ia~~~a~----~~P-------~~v~~lILi~~~~ 232 (383)
T PLN03084 180 LDEYVSSLESLIDEL-------KSDKVSLVVQGYFSPPVVKYAS----AHP-------DKIKKLILLNPPL 232 (383)
T ss_pred HHHHHHHHHHHHHHh-------CCCCceEEEECHHHHHHHHHHH----hCh-------HhhcEEEEECCCC
Confidence 555666666655442 3457999999999965444443 211 1288999888754
No 42
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.88 E-value=0.012 Score=55.49 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=28.7
Q ss_pred eCCeEEEEEcCCcccCCCCCcHHHHHHHHHHHc
Q 042842 332 FGNLSNAVVLGAGHLMPADQPLISQTMIEDWVL 364 (375)
Q Consensus 332 ~~~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~ 364 (375)
+.+..+..+.+|||+|..|+|+...++|..|+.
T Consensus 279 fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~ 311 (315)
T KOG2382|consen 279 FPNVEVHELDEAGHWVHLEKPEEFIESISEFLE 311 (315)
T ss_pred ccchheeecccCCceeecCCHHHHHHHHHHHhc
Confidence 445677788889999999999999999999984
No 43
>PRK06489 hypothetical protein; Provisional
Probab=96.83 E-value=0.0056 Score=59.51 Aligned_cols=133 Identities=14% Similarity=0.113 Sum_probs=70.3
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCccccccc-ccCCCccccccccceecC
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLAL-EPNLGSWNRISGIVFLDN 98 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~-~~n~~sW~~~an~l~iDq 98 (375)
+..++|.-+.......++++.|.||.++|++|.+..+- .|..++ .+ .....--.+..+||.+|.
T Consensus 49 g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~-----~~~~~~----------~l~~~~~~l~~~~~~Via~Dl 113 (360)
T PRK06489 49 ELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFL-----SPTFAG----------ELFGPGQPLDASKYFIILPDG 113 (360)
T ss_pred CceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhc-----cchhHH----------HhcCCCCcccccCCEEEEeCC
Confidence 46777765432110112344788999999988765431 010000 00 000000124468999995
Q ss_pred CCccceeeccCCCCC-----CCChHHHHHHHHHHHHHHHhhCCCCCCCCE-EEEecCCCcccchHHHHHHHHhccCCCCC
Q 042842 99 PIGTGLSFAVTNDEI-----PRNQSSVAKHLFAAINGFIDLDPLFKNRPI-YVTGESYAGKSIPSIGYHILKQNKRVPVS 172 (375)
Q Consensus 99 P~GtGfS~~~~~~~~-----~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~-~i~GESYgG~yvp~~a~~i~~~n~~~~~~ 172 (375)
.|.|.|..... .. ..+.++.++++..++. +. +.-.++ +|+|+|+||..+-.+|.+--+.
T Consensus 114 -~GhG~S~~p~~-~~~~~~~~~~~~~~a~~~~~~l~---~~---lgi~~~~~lvG~SmGG~vAl~~A~~~P~~------- 178 (360)
T PRK06489 114 -IGHGKSSKPSD-GLRAAFPRYDYDDMVEAQYRLVT---EG---LGVKHLRLILGTSMGGMHAWMWGEKYPDF------- 178 (360)
T ss_pred -CCCCCCCCCCc-CCCCCCCcccHHHHHHHHHHHHH---Hh---cCCCceeEEEEECHHHHHHHHHHHhCchh-------
Confidence 69999853211 11 1234445555444332 21 222355 4899999998887777543222
Q ss_pred ceeecceeeecCCC
Q 042842 173 KREKLHGVAIGNGL 186 (375)
Q Consensus 173 ~~inLkGi~IGNg~ 186 (375)
++++++.++.
T Consensus 179 ----V~~LVLi~s~ 188 (360)
T PRK06489 179 ----MDALMPMASQ 188 (360)
T ss_pred ----hheeeeeccC
Confidence 7777776653
No 44
>PLN02578 hydrolase
Probab=96.77 E-value=0.0048 Score=59.85 Aligned_cols=75 Identities=20% Similarity=0.167 Sum_probs=51.0
Q ss_pred ccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCC
Q 042842 90 ISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRV 169 (375)
Q Consensus 90 ~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~ 169 (375)
..+++-+|. .|.|.|... . ...+.+..++++.++++.. ...+++|+|+|+||..+..+|.+--+
T Consensus 112 ~~~v~~~D~-~G~G~S~~~-~--~~~~~~~~a~~l~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~p~----- 175 (354)
T PLN02578 112 KYKVYALDL-LGFGWSDKA-L--IEYDAMVWRDQVADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGYPE----- 175 (354)
T ss_pred CCEEEEECC-CCCCCCCCc-c--cccCHHHHHHHHHHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhChH-----
Confidence 467999996 589988422 1 1234445566666665542 24689999999999987777765433
Q ss_pred CCCceeecceeeecCCC
Q 042842 170 PVSKREKLHGVAIGNGL 186 (375)
Q Consensus 170 ~~~~~inLkGi~IGNg~ 186 (375)
.++++++.|+.
T Consensus 176 ------~v~~lvLv~~~ 186 (354)
T PLN02578 176 ------LVAGVALLNSA 186 (354)
T ss_pred ------hcceEEEECCC
Confidence 27888887764
No 45
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.74 E-value=0.02 Score=53.31 Aligned_cols=123 Identities=16% Similarity=0.184 Sum_probs=81.3
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhH-Hh----HhhhcccCcEEcCCCCCcccccccccCCCccccccccc
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSS-ML----GNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIV 94 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss-~~----g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l 94 (375)
+..||.-+..-.+ .++-+-+|+.+.|.=+-|| .+ ..|...| .-+-
T Consensus 37 G~~lft~~W~p~~---~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g---------------------------~~v~ 86 (313)
T KOG1455|consen 37 GAKLFTQSWLPLS---GTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSG---------------------------FAVY 86 (313)
T ss_pred CCEeEEEecccCC---CCCCceEEEEEcCCcccchhhHHHHHHHHHhCC---------------------------CeEE
Confidence 6788877775443 2355778888888644443 22 2222221 1255
Q ss_pred eecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCce
Q 042842 95 FLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKR 174 (375)
Q Consensus 95 ~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~ 174 (375)
-+|+ .|.|.|-+- ..+..+.+.+++|+..|+..+-. ..++++.|.|++|||.||..+-.++.+ ...
T Consensus 87 a~D~-~GhG~SdGl--~~yi~~~d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGGAV~Ll~~~k----~p~------ 152 (313)
T KOG1455|consen 87 AIDY-EGHGRSDGL--HAYVPSFDLVVDDVISFFDSIKE-REENKGLPRFLFGESMGGAVALLIALK----DPN------ 152 (313)
T ss_pred Eeec-cCCCcCCCC--cccCCcHHHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcchHHHHHHHhh----CCc------
Confidence 6786 899999643 35788888889998877776554 457889999999999999766555543 221
Q ss_pred eecceeeecCCCC
Q 042842 175 EKLHGVAIGNGLT 187 (375)
Q Consensus 175 inLkGi~IGNg~i 187 (375)
-..|+++..++.
T Consensus 153 -~w~G~ilvaPmc 164 (313)
T KOG1455|consen 153 -FWDGAILVAPMC 164 (313)
T ss_pred -ccccceeeeccc
Confidence 166777777764
No 46
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=96.69 E-value=0.0069 Score=56.53 Aligned_cols=106 Identities=17% Similarity=0.143 Sum_probs=63.9
Q ss_pred CCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCCh
Q 042842 38 SQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQ 117 (375)
Q Consensus 38 ~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~ 117 (375)
.++|.||++.|..+.++.+..+.+ .+.. +-.+++-+|.| |.|.|.... ....+.
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~-----------------~L~~------~g~~vi~~dl~-g~G~s~~~~--~~~~~~ 69 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRC-----------------LMEN------SGYKVTCIDLK-SAGIDQSDA--DSVTTF 69 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHH-----------------HHHh------CCCEEEEeccc-CCCCCCCCc--ccCCCH
Confidence 568999999998666555422211 1211 12578999964 888773221 112455
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCC
Q 042842 118 SSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGL 186 (375)
Q Consensus 118 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~ 186 (375)
++.++++.++| +... ..++++|+|+||||..+-.++.+.-+ .++++++.++.
T Consensus 70 ~~~~~~l~~~i----~~l~--~~~~v~lvGhS~GG~v~~~~a~~~p~-----------~v~~lv~~~~~ 121 (273)
T PLN02211 70 DEYNKPLIDFL----SSLP--ENEKVILVGHSAGGLSVTQAIHRFPK-----------KICLAVYVAAT 121 (273)
T ss_pred HHHHHHHHHHH----HhcC--CCCCEEEEEECchHHHHHHHHHhChh-----------heeEEEEeccc
Confidence 55555554444 4322 14789999999999977777643221 26777776554
No 47
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.67 E-value=0.0097 Score=57.10 Aligned_cols=36 Identities=22% Similarity=0.392 Sum_probs=33.1
Q ss_pred EEeCCeEEEEEcCCcccCCCCCcHHHHHHHHHHHcC
Q 042842 330 QKFGNLSNAVVLGAGHLMPADQPLISQTMIEDWVLD 365 (375)
Q Consensus 330 k~~~~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~g 365 (375)
++..|..+..|.+|||.+..+.|++....|..|+..
T Consensus 288 ~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~ 323 (326)
T KOG1454|consen 288 KKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIAR 323 (326)
T ss_pred hhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHH
Confidence 445899999999999999999999999999999965
No 48
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=96.63 E-value=0.013 Score=59.15 Aligned_cols=129 Identities=11% Similarity=0.117 Sum_probs=75.8
Q ss_pred eeeecCCCCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccc
Q 042842 11 GYLPVSPATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRI 90 (375)
Q Consensus 11 Gy~~v~~~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~ 90 (375)
-|+..+ +..+||+.....+ ....|.||+++|.+|.+.++.... =| .+.. .+.+.
T Consensus 179 ~~~~~~---~~~l~~~~~gp~~----~~~k~~VVLlHG~~~s~~~W~~~~--~~--------------~L~~---~~~~~ 232 (481)
T PLN03087 179 SWLSSS---NESLFVHVQQPKD----NKAKEDVLFIHGFISSSAFWTETL--FP--------------NFSD---AAKST 232 (481)
T ss_pred eeEeeC---CeEEEEEEecCCC----CCCCCeEEEECCCCccHHHHHHHH--HH--------------HHHH---HhhCC
Confidence 444443 3578877655322 123578999999998887763210 00 1111 12345
Q ss_pred cccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCC
Q 042842 91 SGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVP 170 (375)
Q Consensus 91 an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~ 170 (375)
..++-+| -.|.|.|.... +...+.++.++++. +.+++. +...+++|+|+|+||..+-.+|.+--+
T Consensus 233 yrVia~D-l~G~G~S~~p~--~~~ytl~~~a~~l~---~~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~~Pe------ 297 (481)
T PLN03087 233 YRLFAVD-LLGFGRSPKPA--DSLYTLREHLEMIE---RSVLER---YKVKSFHIVAHSLGCILALALAVKHPG------ 297 (481)
T ss_pred CEEEEEC-CCCCCCCcCCC--CCcCCHHHHHHHHH---HHHHHH---cCCCCEEEEEECHHHHHHHHHHHhChH------
Confidence 6789999 46889884221 11223444444432 234443 335689999999999988877764322
Q ss_pred CCceeecceeeecCC
Q 042842 171 VSKREKLHGVAIGNG 185 (375)
Q Consensus 171 ~~~~inLkGi~IGNg 185 (375)
.++++++.++
T Consensus 298 -----~V~~LVLi~~ 307 (481)
T PLN03087 298 -----AVKSLTLLAP 307 (481)
T ss_pred -----hccEEEEECC
Confidence 2778887775
No 49
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.63 E-value=0.0079 Score=57.66 Aligned_cols=140 Identities=11% Similarity=0.181 Sum_probs=84.2
Q ss_pred CCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccc-cccccceec
Q 042842 19 TGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWN-RISGIVFLD 97 (375)
Q Consensus 19 ~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~-~~an~l~iD 97 (375)
....+.-+.|....+. ....+|+|||+.||=-|-+-. .+ ....+-.++. ..+|.+-
T Consensus 70 ~~~~l~vRly~P~~~~-~~~~~p~lvyfHGGGf~~~S~---------~~-----------~~y~~~~~~~a~~~~~vv-- 126 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSS-SETKLPVLVYFHGGGFCLGSA---------NS-----------PAYDSFCTRLAAELNCVV-- 126 (336)
T ss_pred CCCCeEEEEEcCCCCC-cccCceEEEEEeCCccEeCCC---------CC-----------chhHHHHHHHHHHcCeEE--
Confidence 3578999999876542 126899999999996662210 00 0011111111 2223322
Q ss_pred CCCccceeeccCCCCCCCChHHHHHHHHHHHHH-HHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceee
Q 042842 98 NPIGTGLSFAVTNDEIPRNQSSVAKHLFAAING-FIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREK 176 (375)
Q Consensus 98 qP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~-f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~in 176 (375)
+.++|--.. ...+|..-++.-..+..++.+ |+...-+.+ .++|+|.|-||..+-.+|.++.+.. ...+.
T Consensus 127 --vSVdYRLAP-Eh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~-----~~~~k 196 (336)
T KOG1515|consen 127 --VSVDYRLAP-EHPFPAAYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK-----LSKPK 196 (336)
T ss_pred --EecCcccCC-CCCCCccchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc-----CCCcc
Confidence 233333322 223455544444444455555 776655543 3999999999999999999998863 13567
Q ss_pred cceeeecCCCCCccc
Q 042842 177 LHGVAIGNGLTDPVS 191 (375)
Q Consensus 177 LkGi~IGNg~idp~~ 191 (375)
|+|+++.-|+.....
T Consensus 197 i~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 197 IKGQILIYPFFQGTD 211 (336)
T ss_pred eEEEEEEecccCCCC
Confidence 999999988876443
No 50
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=96.58 E-value=0.022 Score=53.21 Aligned_cols=53 Identities=15% Similarity=0.228 Sum_probs=34.9
Q ss_pred HHHHHHHhh-CCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCcc
Q 042842 126 AAINGFIDL-DPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 126 ~fl~~f~~~-~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~ 190 (375)
+.|..+++. ++ ....+++|+|+|+||..+-.++.+--+ .+++++..+|+.++.
T Consensus 123 ~~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~~p~-----------~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 123 QELPALVAAQFP-LDGERQGITGHSMGGHGALVIALKNPD-----------RFKSVSAFAPIVAPS 176 (275)
T ss_pred HHHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHhCcc-----------cceEEEEECCccCcc
Confidence 334444443 33 445689999999999877766653211 167888888888763
No 51
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=96.52 E-value=0.011 Score=55.07 Aligned_cols=128 Identities=13% Similarity=0.072 Sum_probs=76.3
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCC---hhH-HhHhhhcccCcEEcCCCCCcccccccccCCCccccccccce
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPG---CSS-MLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVF 95 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG---~Ss-~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~ 95 (375)
..++|.|+++... ...+|+||.++|-.+ ++. ++..+. . .+. ..-.+++-
T Consensus 9 ~g~~~~~~~~p~~----~~~~~~VlllHG~g~~~~~~~~~~~~la---~--------------~La------~~Gy~Vl~ 61 (266)
T TIGR03101 9 HGFRFCLYHPPVA----VGPRGVVIYLPPFAEEMNKSRRMVALQA---R--------------AFA------AGGFGVLQ 61 (266)
T ss_pred CCcEEEEEecCCC----CCCceEEEEECCCcccccchhHHHHHHH---H--------------HHH------HCCCEEEE
Confidence 4678999987543 223789999998532 111 111000 0 111 12357889
Q ss_pred ecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCcee
Q 042842 96 LDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKRE 175 (375)
Q Consensus 96 iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~i 175 (375)
+| -.|.|.|..... ..+.....+|+..++ +|++.. ...+++|+|+|+||..+..++.+.- -
T Consensus 62 ~D-l~G~G~S~g~~~---~~~~~~~~~Dv~~ai-~~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~p-----------~ 122 (266)
T TIGR03101 62 ID-LYGCGDSAGDFA---AARWDVWKEDVAAAY-RWLIEQ---GHPPVTLWGLRLGALLALDAANPLA-----------A 122 (266)
T ss_pred EC-CCCCCCCCCccc---cCCHHHHHHHHHHHH-HHHHhc---CCCCEEEEEECHHHHHHHHHHHhCc-----------c
Confidence 99 578998853211 123444556655443 455442 2468999999999999887764421 1
Q ss_pred ecceeeecCCCCCccccc
Q 042842 176 KLHGVAIGNGLTDPVSQV 193 (375)
Q Consensus 176 nLkGi~IGNg~idp~~q~ 193 (375)
.++++++.+++++-....
T Consensus 123 ~v~~lVL~~P~~~g~~~l 140 (266)
T TIGR03101 123 KCNRLVLWQPVVSGKQQL 140 (266)
T ss_pred ccceEEEeccccchHHHH
Confidence 278899999988755433
No 52
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=96.49 E-value=0.012 Score=56.80 Aligned_cols=76 Identities=13% Similarity=0.105 Sum_probs=49.9
Q ss_pred cccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccC
Q 042842 89 RISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKR 168 (375)
Q Consensus 89 ~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~ 168 (375)
+...||.+|.| |.|-|. .. ..+..+.|+++..+|... .. ++.+.|+|+|+||..+-.+|.+--+.
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~---~~--~~~~~~~a~dl~~ll~~l-----~l-~~~~~lvG~SmGG~vA~~~A~~~P~~--- 162 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSL---DV--PIDTADQADAIALLLDAL-----GI-ARLHAFVGYSYGALVGLQFASRHPAR--- 162 (343)
T ss_pred cccEEEEEeCC-CCCCCC---CC--CCCHHHHHHHHHHHHHHc-----CC-CcceEEEEECHHHHHHHHHHHHChHh---
Confidence 45789999976 666552 11 234455677766555431 11 23467999999999888888654332
Q ss_pred CCCCceeecceeeecCCCC
Q 042842 169 VPVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 169 ~~~~~~inLkGi~IGNg~i 187 (375)
++++++.++..
T Consensus 163 --------V~~LvLi~s~~ 173 (343)
T PRK08775 163 --------VRTLVVVSGAH 173 (343)
T ss_pred --------hheEEEECccc
Confidence 88888888754
No 53
>PLN02965 Probable pheophorbidase
Probab=96.36 E-value=0.0057 Score=56.16 Aligned_cols=75 Identities=16% Similarity=0.237 Sum_probs=50.0
Q ss_pred cccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCC-CCCEEEEecCCCcccchHHHHHHHHhccCC
Q 042842 91 SGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFK-NRPIYVTGESYAGKSIPSIGYHILKQNKRV 169 (375)
Q Consensus 91 an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~-~~~~~i~GESYgG~yvp~~a~~i~~~n~~~ 169 (375)
..||-+| ..|.|.|-... ....+.++.|+++..+|.. +. .++++|+|+|+||..+..++.+.-+
T Consensus 31 ~~via~D-l~G~G~S~~~~--~~~~~~~~~a~dl~~~l~~-------l~~~~~~~lvGhSmGG~ia~~~a~~~p~----- 95 (255)
T PLN02965 31 FKSTCVD-LTGAGISLTDS--NTVSSSDQYNRPLFALLSD-------LPPDHKVILVGHSIGGGSVTEALCKFTD----- 95 (255)
T ss_pred ceEEEec-CCcCCCCCCCc--cccCCHHHHHHHHHHHHHh-------cCCCCCEEEEecCcchHHHHHHHHhCch-----
Confidence 4689999 68999994221 1123455566666655543 22 2589999999999888888764322
Q ss_pred CCCceeecceeeecCCC
Q 042842 170 PVSKREKLHGVAIGNGL 186 (375)
Q Consensus 170 ~~~~~inLkGi~IGNg~ 186 (375)
.++++++.|+.
T Consensus 96 ------~v~~lvl~~~~ 106 (255)
T PLN02965 96 ------KISMAIYVAAA 106 (255)
T ss_pred ------heeEEEEEccc
Confidence 16788877764
No 54
>PLN02442 S-formylglutathione hydrolase
Probab=96.32 E-value=0.038 Score=51.87 Aligned_cols=56 Identities=18% Similarity=0.220 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCcc
Q 042842 121 AKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 121 a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~ 190 (375)
.+++...+..++.. +...+++|+|.|+||+-+-.++.+- .. .+++++..+|..++.
T Consensus 126 ~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~----p~-------~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 126 VKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKN----PD-------KYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhC----ch-------hEEEEEEECCccCcc
Confidence 34445555555543 3456799999999998666655431 11 178888999988754
No 55
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.26 E-value=0.015 Score=51.41 Aligned_cols=104 Identities=20% Similarity=0.249 Sum_probs=62.6
Q ss_pred CCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCChHH
Q 042842 40 TPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSS 119 (375)
Q Consensus 40 ~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~ 119 (375)
.|.+++++|+|+++..+....+ .+..... + .+++.+|+| |.|.|. . . ......
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~-----------------~~~~~~~---~-~~~~~~d~~-g~g~s~-~-~---~~~~~~ 73 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFK-----------------VLPALAA---R-YRVIAPDLR-GHGRSD-P-A---GYSLSA 73 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHH-----------------Hhhcccc---c-eEEEEeccc-CCCCCC-c-c---cccHHH
Confidence 6699999999999887744110 0111111 1 789999999 999995 1 0 111111
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCC
Q 042842 120 VAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 120 ~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~id 188 (375)
.+++ +..|++.. ...++.|.|+|+||..+-.++.+.-+ .++++++.++...
T Consensus 74 ~~~~----~~~~~~~~---~~~~~~l~G~S~Gg~~~~~~~~~~p~-----------~~~~~v~~~~~~~ 124 (282)
T COG0596 74 YADD----LAALLDAL---GLEKVVLVGHSMGGAVALALALRHPD-----------RVRGLVLIGPAPP 124 (282)
T ss_pred HHHH----HHHHHHHh---CCCceEEEEecccHHHHHHHHHhcch-----------hhheeeEecCCCC
Confidence 2333 44444432 22349999999997766666654433 2667776665544
No 56
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=96.24 E-value=0.037 Score=52.38 Aligned_cols=136 Identities=16% Similarity=0.196 Sum_probs=88.3
Q ss_pred eeeeecCCCCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCcccc
Q 042842 10 SGYLPVSPATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNR 89 (375)
Q Consensus 10 sGy~~v~~~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~ 89 (375)
-|+....+ +..++|+.+.+..+ .+.+|+.++|.=.++.-+-.+.+ .+..+-
T Consensus 11 ~~~~~~~d--~~~~~~~~~~~~~~-----~~g~Vvl~HG~~Eh~~ry~~la~-----------------~l~~~G----- 61 (298)
T COG2267 11 EGYFTGAD--GTRLRYRTWAAPEP-----PKGVVVLVHGLGEHSGRYEELAD-----------------DLAARG----- 61 (298)
T ss_pred cceeecCC--CceEEEEeecCCCC-----CCcEEEEecCchHHHHHHHHHHH-----------------HHHhCC-----
Confidence 45555544 68999999987541 23899999998666554432221 122222
Q ss_pred ccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCC
Q 042842 90 ISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRV 169 (375)
Q Consensus 90 ~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~ 169 (375)
..|+=+|+ .|.|.|.- ...+...+..+...|+-.+++..-..+ ...|++|+|+|.||-.+...+....
T Consensus 62 -~~V~~~D~-RGhG~S~r-~~rg~~~~f~~~~~dl~~~~~~~~~~~---~~~p~~l~gHSmGg~Ia~~~~~~~~------ 129 (298)
T COG2267 62 -FDVYALDL-RGHGRSPR-GQRGHVDSFADYVDDLDAFVETIAEPD---PGLPVFLLGHSMGGLIALLYLARYP------ 129 (298)
T ss_pred -CEEEEecC-CCCCCCCC-CCcCCchhHHHHHHHHHHHHHHHhccC---CCCCeEEEEeCcHHHHHHHHHHhCC------
Confidence 24666784 89999952 222334455566666666666555443 3679999999999988777665443
Q ss_pred CCCceeecceeeecCCCCCccc
Q 042842 170 PVSKREKLHGVAIGNGLTDPVS 191 (375)
Q Consensus 170 ~~~~~inLkGi~IGNg~idp~~ 191 (375)
-+++|++|-+|++....
T Consensus 130 -----~~i~~~vLssP~~~l~~ 146 (298)
T COG2267 130 -----PRIDGLVLSSPALGLGG 146 (298)
T ss_pred -----ccccEEEEECccccCCh
Confidence 23999999999987653
No 57
>PRK07581 hypothetical protein; Validated
Probab=96.24 E-value=0.018 Score=55.21 Aligned_cols=32 Identities=19% Similarity=0.075 Sum_probs=29.0
Q ss_pred CCeEEEEEcC-CcccCCCCCcHHHHHHHHHHHc
Q 042842 333 GNLSNAVVLG-AGHLMPADQPLISQTMIEDWVL 364 (375)
Q Consensus 333 ~~ltf~~V~~-AGH~vP~dqP~~~~~mi~~fl~ 364 (375)
.+..+++|.+ |||+++.+||+....++++||.
T Consensus 302 p~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~ 334 (339)
T PRK07581 302 PNAELRPIESIWGHLAGFGQNPADIAFIDAALK 334 (339)
T ss_pred CCCeEEEeCCCCCccccccCcHHHHHHHHHHHH
Confidence 4567889998 9999999999999999999994
No 58
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=96.21 E-value=0.035 Score=54.35 Aligned_cols=137 Identities=10% Similarity=-0.017 Sum_probs=74.0
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhh--hcccCcEEcCCCCCcccccccccCCCccccccccceec
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNF--LEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLD 97 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f--~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iD 97 (375)
+.+++|.-+-.. ++...|.||.++|-+|.+..+... .+.+|=.+.. .+.....=-.+...||-+|
T Consensus 32 ~~~~~y~~~G~~----~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~---------~~~~~~~l~~~~~~vi~~D 98 (379)
T PRK00175 32 PVELAYETYGTL----NADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDN---------MVGPGKPIDTDRYFVICSN 98 (379)
T ss_pred CceEEEEecccc----CCCCCCEEEEeCCcCCchhhcccccccCCCCcchhh---------ccCCCCccCccceEEEecc
Confidence 457888765321 123479999999998887654211 0011101100 0000000002346799999
Q ss_pred CCCccceeeccCCC------CC-----CCChHHHHHHHHHHHHHHHhhCCCCCCCC-EEEEecCCCcccchHHHHHHHHh
Q 042842 98 NPIGTGLSFAVTND------EI-----PRNQSSVAKHLFAAINGFIDLDPLFKNRP-IYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 98 qP~GtGfS~~~~~~------~~-----~~~~~~~a~~~~~fl~~f~~~~p~~~~~~-~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
.|-+.|.|...++. .+ ..+.++.++++.. +++.. .-.+ .+|+|+|+||..+-.+|.+.-+.
T Consensus 99 l~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~~ 171 (379)
T PRK00175 99 VLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQAR----LLDAL---GITRLAAVVGGSMGGMQALEWAIDYPDR 171 (379)
T ss_pred CCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHH----HHHHh---CCCCceEEEEECHHHHHHHHHHHhChHh
Confidence 76555555322110 00 2344444555444 44432 2345 58999999998888888764332
Q ss_pred ccCCCCCceeecceeeecCCCC
Q 042842 166 NKRVPVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 166 n~~~~~~~~inLkGi~IGNg~i 187 (375)
++++++.|+..
T Consensus 172 -----------v~~lvl~~~~~ 182 (379)
T PRK00175 172 -----------VRSALVIASSA 182 (379)
T ss_pred -----------hhEEEEECCCc
Confidence 88899888643
No 59
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.14 E-value=0.019 Score=51.31 Aligned_cols=53 Identities=25% Similarity=0.288 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCC
Q 042842 123 HLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 123 ~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~i 187 (375)
++.+++......++ ....+++|+|+|.||..+-.++.+--+ .+.++++..|..
T Consensus 78 ~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~~p~-----------~~~~~~~~~g~~ 130 (212)
T TIGR01840 78 SLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCTYPD-----------VFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHhCch-----------hheEEEeecCCc
Confidence 34344443334432 345689999999999876666543111 166776666543
No 60
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.98 E-value=0.0053 Score=57.45 Aligned_cols=81 Identities=14% Similarity=0.096 Sum_probs=51.4
Q ss_pred ccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCC
Q 042842 90 ISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRV 169 (375)
Q Consensus 90 ~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~ 169 (375)
..|||.+|-+.+..-.|.. ...+...+++++..+|+...+.. .+...+++|+|+|+||+.+-.++.++-+
T Consensus 66 ~~nVi~vD~~~~~~~~y~~----a~~~~~~v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~----- 135 (275)
T cd00707 66 DYNVIVVDWGRGANPNYPQ----AVNNTRVVGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG----- 135 (275)
T ss_pred CCEEEEEECccccccChHH----HHHhHHHHHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC-----
Confidence 4789999976542111110 11244556677777666655442 2334689999999999999888876532
Q ss_pred CCCceeecceeeecCCC
Q 042842 170 PVSKREKLHGVAIGNGL 186 (375)
Q Consensus 170 ~~~~~inLkGi~IGNg~ 186 (375)
.|+.|+..++.
T Consensus 136 ------~v~~iv~LDPa 146 (275)
T cd00707 136 ------KLGRITGLDPA 146 (275)
T ss_pred ------ccceeEEecCC
Confidence 27777776654
No 61
>PRK05855 short chain dehydrogenase; Validated
Probab=95.89 E-value=0.021 Score=58.69 Aligned_cols=97 Identities=16% Similarity=0.205 Sum_probs=63.2
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCC
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNP 99 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP 99 (375)
+..+.|+-+. +.+.|.||.++|.++.+..+.-+.+ .+ .+...|+-+| .
T Consensus 12 g~~l~~~~~g-------~~~~~~ivllHG~~~~~~~w~~~~~-----------------~L-------~~~~~Vi~~D-~ 59 (582)
T PRK05855 12 GVRLAVYEWG-------DPDRPTVVLVHGYPDNHEVWDGVAP-----------------LL-------ADRFRVVAYD-V 59 (582)
T ss_pred CEEEEEEEcC-------CCCCCeEEEEcCCCchHHHHHHHHH-----------------Hh-------hcceEEEEec-C
Confidence 5677776442 2347899999999877766532221 12 1236799999 5
Q ss_pred CccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccc
Q 042842 100 IGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSI 155 (375)
Q Consensus 100 ~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yv 155 (375)
.|.|.|..... ....+.++.++|+..+++.. . ...+++|+|+|+||..+
T Consensus 60 ~G~G~S~~~~~-~~~~~~~~~a~dl~~~i~~l-~-----~~~~~~lvGhS~Gg~~a 108 (582)
T PRK05855 60 RGAGRSSAPKR-TAAYTLARLADDFAAVIDAV-S-----PDRPVHLLAHDWGSIQG 108 (582)
T ss_pred CCCCCCCCCCc-ccccCHHHHHHHHHHHHHHh-C-----CCCcEEEEecChHHHHH
Confidence 69999964322 11345677788887777642 1 13579999999999544
No 62
>PLN02511 hydrolase
Probab=95.67 E-value=0.056 Score=53.17 Aligned_cols=116 Identities=17% Similarity=0.178 Sum_probs=66.6
Q ss_pred eeeecCCCCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHH-h--HhhhcccCcEEcCCCCCcccccccccCCCcc
Q 042842 11 GYLPVSPATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSM-L--GNFLEVGPWRVTHRPNTTQQQLALEPNLGSW 87 (375)
Q Consensus 11 Gy~~v~~~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~-~--g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW 87 (375)
-++...+ +..+.+..+..... ..+.++|+||.|.|..|+|.. + .+.. .+.
T Consensus 74 e~l~~~D--G~~~~ldw~~~~~~-~~~~~~p~vvllHG~~g~s~~~y~~~~~~------------------~~~------ 126 (388)
T PLN02511 74 ECLRTPD--GGAVALDWVSGDDR-ALPADAPVLILLPGLTGGSDDSYVRHMLL------------------RAR------ 126 (388)
T ss_pred EEEECCC--CCEEEEEecCcccc-cCCCCCCEEEEECCCCCCCCCHHHHHHHH------------------HHH------
Confidence 4555544 45565544432111 124578999999999887642 1 1111 010
Q ss_pred ccccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHH
Q 042842 88 NRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGY 160 (375)
Q Consensus 88 ~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~ 160 (375)
.+-.+++-+| -.|.|-|...+...+ ....++|+..+++..-..+| ..+++++|+|.||..+-.++.
T Consensus 127 ~~g~~vv~~d-~rG~G~s~~~~~~~~---~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~ 192 (388)
T PLN02511 127 SKGWRVVVFN-SRGCADSPVTTPQFY---SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLG 192 (388)
T ss_pred HCCCEEEEEe-cCCCCCCCCCCcCEE---cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHH
Confidence 1234678888 478888743222111 12345576666655555554 568999999999988655553
No 63
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=95.49 E-value=0.096 Score=48.80 Aligned_cols=78 Identities=19% Similarity=0.177 Sum_probs=51.9
Q ss_pred cccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCC
Q 042842 91 SGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVP 170 (375)
Q Consensus 91 an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~ 170 (375)
.+++-+|. .|.|-|... ..+.++..+|+..+++.+-+..|.+ .++.++|+|.||..+-.+|. ...
T Consensus 58 ~~v~~~Dl-~G~G~S~~~-----~~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~----~~~--- 122 (274)
T TIGR03100 58 FPVLRFDY-RGMGDSEGE-----NLGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAP----ADL--- 122 (274)
T ss_pred CEEEEeCC-CCCCCCCCC-----CCCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhh----hCC---
Confidence 57888996 599988421 1234456677777776555544443 46999999999976544432 111
Q ss_pred CCceeecceeeecCCCCC
Q 042842 171 VSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 171 ~~~~inLkGi~IGNg~id 188 (375)
.++|+++.|+++.
T Consensus 123 -----~v~~lil~~p~~~ 135 (274)
T TIGR03100 123 -----RVAGLVLLNPWVR 135 (274)
T ss_pred -----CccEEEEECCccC
Confidence 3899999999865
No 64
>PRK10985 putative hydrolase; Provisional
Probab=95.46 E-value=0.17 Score=48.35 Aligned_cols=20 Identities=15% Similarity=0.056 Sum_probs=16.6
Q ss_pred eCCeEEEEEcCCcccCCCCC
Q 042842 332 FGNLSNAVVLGAGHLMPADQ 351 (375)
Q Consensus 332 ~~~ltf~~V~~AGH~vP~dq 351 (375)
..++.++++.++||+.+.+.
T Consensus 281 ~~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 281 PPNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCeEEEECCCCCceeeCCC
Confidence 45788899999999988764
No 65
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=95.44 E-value=0.015 Score=51.75 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=60.3
Q ss_pred cccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccC
Q 042842 89 RISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKR 168 (375)
Q Consensus 89 ~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~ 168 (375)
+=..|+.+|..-+.||+..-........-....+|+..+++...+.. ..-...+.|+|.||||+.+-.++.+ . .
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~---~-~- 86 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQ---H-P- 86 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHH---T-C-
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhcc---c-c-
Confidence 34568899988888877532221222223345677777776655543 4445789999999999988877652 2 1
Q ss_pred CCCCceeecceeeecCCCCCccccch
Q 042842 169 VPVSKREKLHGVAIGNGLTDPVSQVA 194 (375)
Q Consensus 169 ~~~~~~inLkGi~IGNg~idp~~q~~ 194 (375)
-.++.++.++|++|+.....
T Consensus 87 ------~~f~a~v~~~g~~d~~~~~~ 106 (213)
T PF00326_consen 87 ------DRFKAAVAGAGVSDLFSYYG 106 (213)
T ss_dssp ------CGSSEEEEESE-SSTTCSBH
T ss_pred ------eeeeeeeccceecchhcccc
Confidence 12789999999998776543
No 66
>PRK10566 esterase; Provisional
Probab=95.43 E-value=0.074 Score=48.33 Aligned_cols=97 Identities=15% Similarity=0.130 Sum_probs=54.1
Q ss_pred CCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCC-
Q 042842 38 SQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRN- 116 (375)
Q Consensus 38 ~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~- 116 (375)
...|+||.++|++|.......+.. .+.. +-.+++.+|. .|.|-|+..... ....
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~~~~~-----------------~l~~------~G~~v~~~d~-~g~G~~~~~~~~-~~~~~ 79 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYSYFAV-----------------ALAQ------AGFRVIMPDA-PMHGARFSGDEA-RRLNH 79 (249)
T ss_pred CCCCEEEEeCCCCcccchHHHHHH-----------------HHHh------CCCEEEEecC-CcccccCCCccc-cchhh
Confidence 347999999999887543321110 1111 1246788884 567655422111 0101
Q ss_pred ----hHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHH
Q 042842 117 ----QSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGY 160 (375)
Q Consensus 117 ----~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~ 160 (375)
.....+++..+ ..++...+.....+++|+|+|+||..+-.++.
T Consensus 80 ~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 80 FWQILLQNMQEFPTL-RAAIREEGWLLDDRLAVGGASMGGMTALGIMA 126 (249)
T ss_pred HHHHHHHHHHHHHHH-HHHHHhcCCcCccceeEEeecccHHHHHHHHH
Confidence 01233444333 34444444445678999999999998887764
No 67
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.40 E-value=0.032 Score=57.56 Aligned_cols=129 Identities=17% Similarity=0.133 Sum_probs=75.6
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccc-cccccceecC
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWN-RISGIVFLDN 98 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~-~~an~l~iDq 98 (375)
+..|+...|.-.. .+..|+||.++|-...+.... +.. . ....-|. +-..++-+|
T Consensus 6 G~~L~~~~~~P~~----~~~~P~Il~~~gyg~~~~~~~-----~~~--------------~-~~~~~l~~~Gy~vv~~D- 60 (550)
T TIGR00976 6 GTRLAIDVYRPAG----GGPVPVILSRTPYGKDAGLRW-----GLD--------------K-TEPAWFVAQGYAVVIQD- 60 (550)
T ss_pred CCEEEEEEEecCC----CCCCCEEEEecCCCCchhhcc-----ccc--------------c-ccHHHHHhCCcEEEEEe-
Confidence 6788877775332 245899999986433221100 000 0 0000121 245788899
Q ss_pred CCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecc
Q 042842 99 PIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLH 178 (375)
Q Consensus 99 P~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLk 178 (375)
..|.|.|..... . .+ ...++|+..++. |+...| +.+.++.++|.||||..+-.+|.. .. -.||
T Consensus 61 ~RG~g~S~g~~~-~--~~-~~~~~D~~~~i~-~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~---~~--------~~l~ 123 (550)
T TIGR00976 61 TRGRGASEGEFD-L--LG-SDEAADGYDLVD-WIAKQP-WCDGNVGMLGVSYLAVTQLLAAVL---QP--------PALR 123 (550)
T ss_pred ccccccCCCceE-e--cC-cccchHHHHHHH-HHHhCC-CCCCcEEEEEeChHHHHHHHHhcc---CC--------Ccee
Confidence 699999964321 1 11 345667766554 776655 345689999999999765555431 11 1388
Q ss_pred eeeecCCCCCcc
Q 042842 179 GVAIGNGLTDPV 190 (375)
Q Consensus 179 Gi~IGNg~idp~ 190 (375)
+|+..+++.|..
T Consensus 124 aiv~~~~~~d~~ 135 (550)
T TIGR00976 124 AIAPQEGVWDLY 135 (550)
T ss_pred EEeecCcccchh
Confidence 999888876643
No 68
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=95.37 E-value=0.038 Score=53.10 Aligned_cols=95 Identities=18% Similarity=0.150 Sum_probs=60.7
Q ss_pred ccccceecCCCccceeeccCC-CCCCCChHHHHHHHHHHHHHHHhhC----------------CCCC-CCCEEEEecCCC
Q 042842 90 ISGIVFLDNPIGTGLSFAVTN-DEIPRNQSSVAKHLFAAINGFIDLD----------------PLFK-NRPIYVTGESYA 151 (375)
Q Consensus 90 ~an~l~iDqP~GtGfS~~~~~-~~~~~~~~~~a~~~~~fl~~f~~~~----------------p~~~-~~~~~i~GESYg 151 (375)
-..|+-+| -.|.|.|..... .....+.++.++|+..+++..-+.. .++. +.|++|.|+|.|
T Consensus 74 G~~V~~~D-~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmG 152 (332)
T TIGR01607 74 GYSVYGLD-LQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMG 152 (332)
T ss_pred CCcEEEec-ccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCc
Confidence 46789999 599999864321 1222466777888888777553310 0232 679999999999
Q ss_pred cccchHHHHHHHHhccCCCCCceeecceeeecCCCCC
Q 042842 152 GKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 152 G~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~id 188 (375)
|..+..++..+-+.... ..+..++|+++..|++.
T Consensus 153 g~i~~~~~~~~~~~~~~---~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 153 GNIALRLLELLGKSNEN---NDKLNIKGCISLSGMIS 186 (332)
T ss_pred cHHHHHHHHHhcccccc---ccccccceEEEeccceE
Confidence 99887766554322100 01235899988888764
No 69
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.29 E-value=0.13 Score=47.99 Aligned_cols=146 Identities=21% Similarity=0.257 Sum_probs=77.3
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccc-----cc
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISG-----IV 94 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an-----~l 94 (375)
+...-||+|.--. -++.+||+|.|+|+=|.....-. -..|++.|. |+
T Consensus 44 g~~r~y~l~vP~g---~~~~apLvv~LHG~~~sgag~~~-------------------------~sg~d~lAd~~gFlV~ 95 (312)
T COG3509 44 GLKRSYRLYVPPG---LPSGAPLVVVLHGSGGSGAGQLH-------------------------GTGWDALADREGFLVA 95 (312)
T ss_pred CCccceEEEcCCC---CCCCCCEEEEEecCCCChHHhhc-------------------------ccchhhhhcccCcEEE
Confidence 5678899987533 36778999999998766443211 112333333 33
Q ss_pred eecC------CCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccC
Q 042842 95 FLDN------PIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKR 168 (375)
Q Consensus 95 ~iDq------P~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~ 168 (375)
|.|+ |-+.|-++...+ .....+++ ..+.+.+..-..+| ......+||+|-|-||.++-.++..- .+
T Consensus 96 yPdg~~~~wn~~~~~~~~~p~~--~~~g~ddV-gflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~---p~- 167 (312)
T COG3509 96 YPDGYDRAWNANGCGNWFGPAD--RRRGVDDV-GFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEY---PD- 167 (312)
T ss_pred CcCccccccCCCcccccCCccc--ccCCccHH-HHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcC---cc-
Confidence 4331 455555543221 12222222 22333333333343 34556899999999998776666432 21
Q ss_pred CCCCceeecceeeecCCCC-Cccccchhh-hHHHhhcCCCCH
Q 042842 169 VPVSKREKLHGVAIGNGLT-DPVSQVAVH-ALNAYFIGLING 208 (375)
Q Consensus 169 ~~~~~~inLkGi~IGNg~i-dp~~q~~~~-~~~~~~~gli~~ 208 (375)
-+.++++..|.. +.......- .+.+-.+|..|+
T Consensus 168 -------~faa~A~VAg~~~~~~a~~~~rp~~~m~~~G~~Dp 202 (312)
T COG3509 168 -------IFAAIAPVAGLLALGVACTPPRPVSVMAFHGTADP 202 (312)
T ss_pred -------cccceeeeecccCCCcccCCCCchhHHHhcCCCCC
Confidence 166777777766 333222211 123334665554
No 70
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=95.27 E-value=0.013 Score=51.95 Aligned_cols=77 Identities=14% Similarity=0.132 Sum_probs=50.4
Q ss_pred ccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCC
Q 042842 92 GIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPV 171 (375)
Q Consensus 92 n~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~ 171 (375)
+|+-+| +.|.|+|... .......-..+++.+.+..+++..+ ..+++++|+||||..+-.+|..--+
T Consensus 2 ~vi~~d-~rG~g~S~~~---~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~~p~------- 67 (230)
T PF00561_consen 2 DVILFD-LRGFGYSSPH---WDPDFPDYTTDDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQYPE------- 67 (230)
T ss_dssp EEEEEE-CTTSTTSSSC---CGSGSCTHCHHHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHHSGG-------
T ss_pred EEEEEe-CCCCCCCCCC---ccCCcccccHHHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHHCch-------
Confidence 577889 7999999630 0011222344566666666666544 3349999999999888777654322
Q ss_pred CceeecceeeecCCC
Q 042842 172 SKREKLHGVAIGNGL 186 (375)
Q Consensus 172 ~~~inLkGi~IGNg~ 186 (375)
.++++++.++.
T Consensus 68 ----~v~~lvl~~~~ 78 (230)
T PF00561_consen 68 ----RVKKLVLISPP 78 (230)
T ss_dssp ----GEEEEEEESES
T ss_pred ----hhcCcEEEeee
Confidence 38888877775
No 71
>PRK10162 acetyl esterase; Provisional
Probab=95.12 E-value=0.048 Score=52.07 Aligned_cols=45 Identities=18% Similarity=0.118 Sum_probs=34.9
Q ss_pred CCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCc
Q 042842 140 NRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDP 189 (375)
Q Consensus 140 ~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp 189 (375)
..++.|+|+|.||+.+-.++.++.+... ....++++++..|+++.
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~~~~-----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRDKQI-----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHhcCC-----CccChhheEEECCccCC
Confidence 4679999999999999999987755421 12347889999998874
No 72
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=95.09 E-value=0.09 Score=52.35 Aligned_cols=67 Identities=12% Similarity=0.010 Sum_probs=44.3
Q ss_pred ccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHH
Q 042842 90 ISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYH 161 (375)
Q Consensus 90 ~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~ 161 (375)
..|||-+|-|- -|-|.... ...+...+|+++.++|+...+.. .+.-.+++|+|+|.|||.+-.++.+
T Consensus 73 d~nVI~VDw~g-~g~s~y~~---a~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~ 139 (442)
T TIGR03230 73 SANVIVVDWLS-RAQQHYPT---SAAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSL 139 (442)
T ss_pred CCEEEEEECCC-cCCCCCcc---ccccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHh
Confidence 37999999764 34332111 12344677888877776544332 2445789999999999988887754
No 73
>PRK10115 protease 2; Provisional
Probab=94.79 E-value=0.037 Score=58.51 Aligned_cols=137 Identities=17% Similarity=0.117 Sum_probs=72.4
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCC
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNP 99 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP 99 (375)
|..+-.|++...... .....|+||+..||||.|...++..+.. +|....=++.+=.+
T Consensus 426 G~~Ip~~l~~~~~~~-~~~~~P~ll~~hGg~~~~~~p~f~~~~~----------------------~l~~rG~~v~~~n~ 482 (686)
T PRK10115 426 GVEVPVSLVYHRKHF-RKGHNPLLVYGYGSYGASIDADFSFSRL----------------------SLLDRGFVYAIVHV 482 (686)
T ss_pred CCEEEEEEEEECCCC-CCCCCCEEEEEECCCCCCCCCCccHHHH----------------------HHHHCCcEEEEEEc
Confidence 566666655433211 1345699999999999985432222211 12222222222224
Q ss_pred Cccc-eee--ccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceee
Q 042842 100 IGTG-LSF--AVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREK 176 (375)
Q Consensus 100 ~GtG-fS~--~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~in 176 (375)
.|.| |-. .... ..... ...-+|+..+.+...+. .--....+.|.|-||||..+-.++. +... -
T Consensus 483 RGs~g~G~~w~~~g-~~~~k-~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~----~~Pd-------l 548 (686)
T PRK10115 483 RGGGELGQQWYEDG-KFLKK-KNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAIN----QRPE-------L 548 (686)
T ss_pred CCCCccCHHHHHhh-hhhcC-CCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHh----cChh-------h
Confidence 4433 221 1100 00111 12345666555443333 3233567999999999986554442 2111 2
Q ss_pred cceeeecCCCCCccccc
Q 042842 177 LHGVAIGNGLTDPVSQV 193 (375)
Q Consensus 177 LkGi~IGNg~idp~~q~ 193 (375)
+++++.+.|++|....+
T Consensus 549 f~A~v~~vp~~D~~~~~ 565 (686)
T PRK10115 549 FHGVIAQVPFVDVVTTM 565 (686)
T ss_pred eeEEEecCCchhHhhhc
Confidence 89999999999987543
No 74
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=94.19 E-value=0.05 Score=58.02 Aligned_cols=138 Identities=21% Similarity=0.241 Sum_probs=76.7
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCcccc-ccccceecC
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNR-ISGIVFLDN 98 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~-~an~l~iDq 98 (375)
+..+.+++.-..+-. +.++-||+++.-|||++-+..+.| .+..|.+.+.. -+=++.||
T Consensus 507 ~~~~~~~~~lP~~~~-~~~kyPllv~~yGGP~sq~v~~~~-------------------~~~~~~~~~s~~g~~v~~vd- 565 (755)
T KOG2100|consen 507 GITANAILILPPNFD-PSKKYPLLVVVYGGPGSQSVTSKF-------------------SVDWNEVVVSSRGFAVLQVD- 565 (755)
T ss_pred cEEEEEEEecCCCCC-CCCCCCEEEEecCCCCcceeeeeE-------------------EecHHHHhhccCCeEEEEEc-
Confidence 456677776554322 245789999999999932211100 12222222221 23478888
Q ss_pred CCccceeeccCCCCCCCCh-HHHHHHHHHHHHHHHhhCCCCCC-CCEEEEecCCCcccchHHHHHHHHhccCCCCCceee
Q 042842 99 PIGTGLSFAVTNDEIPRNQ-SSVAKHLFAAINGFIDLDPLFKN-RPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREK 176 (375)
Q Consensus 99 P~GtGfS~~~~~~~~~~~~-~~~a~~~~~fl~~f~~~~p~~~~-~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~in 176 (375)
+.|+|+.=..-...+..+. ....+|...+++.+.+.+ +.+ ..+.|+|-||||.. +..++..-+ .--
T Consensus 566 ~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~--~iD~~ri~i~GwSyGGy~----t~~~l~~~~------~~~ 633 (755)
T KOG2100|consen 566 GRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLP--FIDRSRVAIWGWSYGGYL----TLKLLESDP------GDV 633 (755)
T ss_pred CCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcc--cccHHHeEEeccChHHHH----HHHHhhhCc------Cce
Confidence 8999876321101112211 112455667777777765 444 56999999999964 444444421 112
Q ss_pred cceeeecCCCCCcc
Q 042842 177 LHGVAIGNGLTDPV 190 (375)
Q Consensus 177 LkGi~IGNg~idp~ 190 (375)
+|.-+--+|++|-.
T Consensus 634 fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 634 FKCGVAVAPVTDWL 647 (755)
T ss_pred EEEEEEecceeeee
Confidence 66656677777754
No 75
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=93.97 E-value=0.25 Score=48.34 Aligned_cols=134 Identities=19% Similarity=0.222 Sum_probs=79.3
Q ss_pred eeeecCCCCCceEEEEEEEecCCC-CCCCCCCEEEEecCCCChhH------HhHhhhcccCcEEcCCCCCcccccccccC
Q 042842 11 GYLPVSPATGSAIFYAFYEAQTPT-SPLSQTPLLLWLQGGPGCSS------MLGNFLEVGPWRVTHRPNTTQQQLALEPN 83 (375)
Q Consensus 11 Gy~~v~~~~~~~lfy~~~~a~~~~-~~p~~~Pl~lwl~GGPG~Ss------~~g~f~e~GP~~~~~~~~~~~~~~~~~~n 83 (375)
=+|..++ .|.-..=|+....... .+..++|+++.|-|=+|.|. +....++.| |++ .+-|
T Consensus 96 eii~~~D-GG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~------------VVfN 161 (409)
T KOG1838|consen 96 EIIKTSD-GGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRV------------VVFN 161 (409)
T ss_pred EEEEeCC-CCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEE------------EEEC
Confidence 3455544 2444555554332210 12467899999999888876 445566677 543 2222
Q ss_pred CCccccccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHH
Q 042842 84 LGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHIL 163 (375)
Q Consensus 84 ~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~ 163 (375)
+.|-|-|-.+++.-+..... +|+-++++---++|| .++++.+|.|+||..+ ..++-
T Consensus 162 ---------------~RG~~g~~LtTpr~f~ag~t---~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~iL---~nYLG 217 (409)
T KOG1838|consen 162 ---------------HRGLGGSKLTTPRLFTAGWT---EDLREVVNHIKKRYP---QAPLFAVGFSMGGNIL---TNYLG 217 (409)
T ss_pred ---------------CCCCCCCccCCCceeecCCH---HHHHHHHHHHHHhCC---CCceEEEEecchHHHH---HHHhh
Confidence 68888776665543332221 355444444446777 4699999999999764 55555
Q ss_pred HhccCCCCCceeecceeeecCCCC
Q 042842 164 KQNKRVPVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 164 ~~n~~~~~~~~inLkGi~IGNg~i 187 (375)
+..++ .-=..|++|-|||-
T Consensus 218 E~g~~-----~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 218 EEGDN-----TPLIAAVAVCNPWD 236 (409)
T ss_pred hccCC-----CCceeEEEEeccch
Confidence 54322 11266888999983
No 76
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=93.81 E-value=0.17 Score=45.27 Aligned_cols=77 Identities=16% Similarity=0.269 Sum_probs=52.9
Q ss_pred cccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCC
Q 042842 91 SGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVP 170 (375)
Q Consensus 91 an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~ 170 (375)
.+|..|+ +.|-+ .......+.++.|+...+.|+. ..| ..|++|+|.|+||..+=.+|.+|.++..
T Consensus 28 ~~v~~i~-~~~~~-----~~~~~~~si~~la~~y~~~I~~---~~~---~gp~~L~G~S~Gg~lA~E~A~~Le~~G~--- 92 (229)
T PF00975_consen 28 IGVYGIE-YPGRG-----DDEPPPDSIEELASRYAEAIRA---RQP---EGPYVLAGWSFGGILAFEMARQLEEAGE--- 92 (229)
T ss_dssp EEEEEEC-STTSC-----TTSHEESSHHHHHHHHHHHHHH---HTS---SSSEEEEEETHHHHHHHHHHHHHHHTT----
T ss_pred EEEEEEe-cCCCC-----CCCCCCCCHHHHHHHHHHHhhh---hCC---CCCeeehccCccHHHHHHHHHHHHHhhh---
Confidence 4466666 34444 1122346777788877666653 333 2399999999999999999999988743
Q ss_pred CCceeecceeeecCCCC
Q 042842 171 VSKREKLHGVAIGNGLT 187 (375)
Q Consensus 171 ~~~~inLkGi~IGNg~i 187 (375)
..+.|++.++..
T Consensus 93 -----~v~~l~liD~~~ 104 (229)
T PF00975_consen 93 -----EVSRLILIDSPP 104 (229)
T ss_dssp -----SESEEEEESCSS
T ss_pred -----ccCceEEecCCC
Confidence 377888888653
No 77
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=93.23 E-value=0.73 Score=44.46 Aligned_cols=29 Identities=10% Similarity=0.023 Sum_probs=25.2
Q ss_pred EEEEEc-CCcccCCCCCcHHHHHHHHHHHc
Q 042842 336 SNAVVL-GAGHLMPADQPLISQTMIEDWVL 364 (375)
Q Consensus 336 tf~~V~-~AGH~vP~dqP~~~~~mi~~fl~ 364 (375)
+|+.|. +|||+++.++|+...+.|.+||+
T Consensus 322 ~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 322 TYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred EEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 455665 89999999999999999999984
No 78
>PLN00021 chlorophyllase
Probab=92.66 E-value=0.24 Score=47.26 Aligned_cols=62 Identities=11% Similarity=0.030 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhh-CC---CCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCC
Q 042842 121 AKHLFAAINGFIDL-DP---LFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 121 a~~~~~fl~~f~~~-~p---~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~id 188 (375)
+.++..++.+-++. -| +....+++|+|+|+||+.+-.+|....+.. ....+++++..+++..
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~------~~~~v~ali~ldPv~g 167 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS------LPLKFSALIGLDPVDG 167 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc------cccceeeEEeeccccc
Confidence 44555555543322 11 233467999999999998888876543321 1234778887777643
No 79
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=91.95 E-value=0.86 Score=42.37 Aligned_cols=118 Identities=18% Similarity=0.197 Sum_probs=70.3
Q ss_pred CCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCC-----CCCC
Q 042842 40 TPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTN-----DEIP 114 (375)
Q Consensus 40 ~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~-----~~~~ 114 (375)
+++++|+-|=||....+--|.+. +..+- +....++=+. -+ |+|..... ..-.
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~-----------------L~~~l---~~~~~i~~is-h~--Gh~~~~~~~~~~~~~~~ 58 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSA-----------------LYEKL---NPQFEILGIS-HA--GHSTSPSNSKFSPNGRL 58 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHH-----------------HHHhC---CCCCeeEEec-CC--CCcCCcccccccCCCCc
Confidence 57999999999998876444321 11110 1112222222 12 23322211 1234
Q ss_pred CChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCc
Q 042842 115 RNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDP 189 (375)
Q Consensus 115 ~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp 189 (375)
.+.++..+.-.+||+++....+ -.+.+++|.|+|-|+..+-.+..++. ....+++++++.-|.+.-
T Consensus 59 ~sL~~QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~--------~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 59 FSLQDQIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLP--------DLKFRVKKVILLFPTIED 124 (266)
T ss_pred cCHHHHHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhcc--------ccCCceeEEEEeCCcccc
Confidence 5677788888899999987653 24678999999998865555544443 124567777777776543
No 80
>PRK11460 putative hydrolase; Provisional
Probab=91.85 E-value=0.53 Score=42.70 Aligned_cols=37 Identities=5% Similarity=-0.100 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHH
Q 042842 123 HLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGY 160 (375)
Q Consensus 123 ~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~ 160 (375)
.+.++++...... ....++++|+|.|.||..+-.++.
T Consensus 86 ~l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~ 122 (232)
T PRK11460 86 TFIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVK 122 (232)
T ss_pred HHHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHH
Confidence 3334444433332 344568999999999998876654
No 81
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=91.71 E-value=0.059 Score=52.81 Aligned_cols=79 Identities=18% Similarity=0.159 Sum_probs=51.7
Q ss_pred cccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCC
Q 042842 91 SGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVP 170 (375)
Q Consensus 91 an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~ 170 (375)
.+||=|| =+|||+|.. ++-+. ..+.++..+..|+..-|+.-...+.++|-|+||.|++.+|..=.++
T Consensus 219 iA~LtvD-mPG~G~s~~-----~~l~~--D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~R----- 285 (411)
T PF06500_consen 219 IAMLTVD-MPGQGESPK-----WPLTQ--DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPR----- 285 (411)
T ss_dssp -EEEEE---TTSGGGTT-----T-S-S---CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-----
T ss_pred CEEEEEc-cCCCccccc-----CCCCc--CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccc-----
Confidence 3588899 479999842 12221 1235677888888888988888999999999999999988532222
Q ss_pred CCceeecceeeecCCCCC
Q 042842 171 VSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 171 ~~~~inLkGi~IGNg~id 188 (375)
|||++.-.|.++
T Consensus 286 ------lkavV~~Ga~vh 297 (411)
T PF06500_consen 286 ------LKAVVALGAPVH 297 (411)
T ss_dssp -------SEEEEES---S
T ss_pred ------eeeEeeeCchHh
Confidence 888775555444
No 82
>PLN02454 triacylglycerol lipase
Probab=91.64 E-value=0.42 Score=46.97 Aligned_cols=69 Identities=16% Similarity=0.201 Sum_probs=52.0
Q ss_pred ChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCC
Q 042842 116 NQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 116 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~id 188 (375)
+...+.+++...|+...+.+|..+ ..++|+|||.||-.+-..|..|...... ...++++.+..|.|-+.
T Consensus 204 ~~~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~---~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 204 TKLSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS---GADIPVTAIVFGSPQVG 272 (414)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc---ccCCceEEEEeCCCccc
Confidence 334678899999999999888652 3699999999999999999888765321 12345677888887764
No 83
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=91.06 E-value=1.7 Score=41.10 Aligned_cols=46 Identities=17% Similarity=0.112 Sum_probs=37.8
Q ss_pred CCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCccc
Q 042842 139 KNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPVS 191 (375)
Q Consensus 139 ~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~~ 191 (375)
..+++.|+|+|-||+.+-.++....+.. ...+++.++.-+++|...
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~~-------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDRG-------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhcC-------CCCceEEEEEecccCCcc
Confidence 3578999999999999999999887762 133788889999988776
No 84
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=90.08 E-value=2.1 Score=38.68 Aligned_cols=40 Identities=23% Similarity=0.286 Sum_probs=28.8
Q ss_pred CCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCC
Q 042842 137 LFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 137 ~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~i 187 (375)
..-.+++|++|.|-||...-.++..--+. +.++++..|..
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd~-----------faa~a~~sG~~ 132 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPDL-----------FAAVAVVSGVP 132 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCcc-----------ceEEEeecccc
Confidence 45577899999999998777666543222 67777777764
No 85
>PLN02872 triacylglycerol lipase
Probab=89.50 E-value=2 Score=42.44 Aligned_cols=97 Identities=15% Similarity=0.067 Sum_probs=54.3
Q ss_pred CCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCC------C
Q 042842 38 SQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTN------D 111 (375)
Q Consensus 38 ~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~------~ 111 (375)
..+|.||.+.|..++|..+.+ ++|..-- .+.+... -..|+-.| -.|.|+|+.... .
T Consensus 72 ~~~~~Vll~HGl~~ss~~w~~---~~~~~sl--------a~~La~~------GydV~l~n-~RG~~~s~gh~~~~~~~~~ 133 (395)
T PLN02872 72 QRGPPVLLQHGLFMAGDAWFL---NSPEQSL--------GFILADH------GFDVWVGN-VRGTRWSYGHVTLSEKDKE 133 (395)
T ss_pred CCCCeEEEeCcccccccceee---cCcccch--------HHHHHhC------CCCccccc-ccccccccCCCCCCccchh
Confidence 457899999998877776521 1221000 0001111 12455556 478887754221 1
Q ss_pred CCCCChHHHH-HHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccch
Q 042842 112 EIPRNQSSVA-KHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIP 156 (375)
Q Consensus 112 ~~~~~~~~~a-~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp 156 (375)
-+..+.++.| .|+-.++....+. ...+++++|+|.||..+-
T Consensus 134 fw~~s~~e~a~~Dl~a~id~i~~~----~~~~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 134 FWDWSWQELALYDLAEMIHYVYSI----TNSKIFIVGHSQGTIMSL 175 (395)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHhc----cCCceEEEEECHHHHHHH
Confidence 1234555666 5766666655443 236899999999996553
No 86
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=89.41 E-value=0.33 Score=43.57 Aligned_cols=31 Identities=19% Similarity=0.230 Sum_probs=28.9
Q ss_pred CeEEEEEcCCcccCCCCCcHHHHHHHHHHHc
Q 042842 334 NLSNAVVLGAGHLMPADQPLISQTMIEDWVL 364 (375)
Q Consensus 334 ~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~ 364 (375)
+..+..|.+|||+++.++|++..+.|..|+.
T Consensus 210 ~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 240 (242)
T PRK11126 210 ALPLHVIPNAGHNAHRENPAAFAASLAQILR 240 (242)
T ss_pred cCeEEEeCCCCCchhhhChHHHHHHHHHHHh
Confidence 5788999999999999999999999999994
No 87
>COG4099 Predicted peptidase [General function prediction only]
Probab=89.40 E-value=3.2 Score=38.96 Aligned_cols=37 Identities=19% Similarity=0.133 Sum_probs=26.0
Q ss_pred HHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHH
Q 042842 126 AAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHI 162 (375)
Q Consensus 126 ~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i 162 (375)
+.+.+=+..++..-.+++|++|-|-||.-.=+++.+.
T Consensus 254 dli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kf 290 (387)
T COG4099 254 DLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKF 290 (387)
T ss_pred HHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhC
Confidence 4444344456666678999999999998766666544
No 88
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=89.31 E-value=0.86 Score=46.12 Aligned_cols=36 Identities=17% Similarity=0.073 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHH
Q 042842 123 HLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIG 159 (375)
Q Consensus 123 ~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a 159 (375)
..++++++-...|. -..+++.|+|+|+||+.+-.++
T Consensus 159 ~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 159 LALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHh
Confidence 34566666666664 2356899999999998664443
No 89
>PRK11071 esterase YqiA; Provisional
Probab=89.06 E-value=0.38 Score=42.25 Aligned_cols=34 Identities=12% Similarity=0.147 Sum_probs=24.6
Q ss_pred HHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHH
Q 042842 125 FAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYH 161 (375)
Q Consensus 125 ~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~ 161 (375)
.+++.++++.. ..++++|+|.|.||.++-.+|.+
T Consensus 48 ~~~l~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 48 AELLESLVLEH---GGDPLGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred HHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHH
Confidence 34455555543 34689999999999998888764
No 90
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=88.99 E-value=0.62 Score=38.20 Aligned_cols=62 Identities=15% Similarity=0.265 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCC
Q 042842 119 SVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~i 187 (375)
...+.+.+.|++..+.+| +..+.|+|||-||-.+..++..+.++... ...+++-+..|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~----~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS----SSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT----STTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc----cccceeeeecCCccc
Confidence 345567777888777776 46899999999999999999999887532 135577777777765
No 91
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=88.18 E-value=0.47 Score=46.58 Aligned_cols=31 Identities=16% Similarity=-0.004 Sum_probs=29.0
Q ss_pred CeEEEEEcCCcccCCCCCcHHHHHHHHHHHc
Q 042842 334 NLSNAVVLGAGHLMPADQPLISQTMIEDWVL 364 (375)
Q Consensus 334 ~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~ 364 (375)
+.++.+|.+|||+++.++|+++.+.|.+||+
T Consensus 352 ~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 352 QHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred CCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 5688999999999999999999999999985
No 92
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=88.06 E-value=0.81 Score=40.31 Aligned_cols=63 Identities=17% Similarity=0.137 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHhh---CCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCc
Q 042842 119 SVAKHLFAAINGFIDL---DPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDP 189 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~---~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp 189 (375)
+..+|+..+++-..+. + .+...+++|+|+|-||+.+-.++..+.+... ..++++++..|++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~-------~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRGL-------PKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTTT-------CHESEEEEESCHSST
T ss_pred ccccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhcc-------cchhhhhcccccccc
Confidence 4556666655544432 1 2446689999999999999999988877631 229999999999876
No 93
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=87.75 E-value=1.1 Score=44.57 Aligned_cols=94 Identities=12% Similarity=-0.040 Sum_probs=54.5
Q ss_pred ChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCccccchh
Q 042842 116 NQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPVSQVAV 195 (375)
Q Consensus 116 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~~q~~~ 195 (375)
+.+++-.|+..|++.+-..+....+.|+.++|-||||..+.-+-.+- .. -+.|..--.+.+.....+..
T Consensus 88 t~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~ky----P~-------~~~ga~ASSapv~a~~df~~ 156 (434)
T PF05577_consen 88 TSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKY----PH-------LFDGAWASSAPVQAKVDFWE 156 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-----TT-------T-SEEEEET--CCHCCTTTH
T ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhC----CC-------eeEEEEeccceeeeecccHH
Confidence 67889999999999888777656678999999999997655444222 11 15566666666666665555
Q ss_pred hhHHHhh-cCCCCHHHHHHHHHHHHH
Q 042842 196 HALNAYF-IGLINGRQRVELEKAQRK 220 (375)
Q Consensus 196 ~~~~~~~-~gli~~~~~~~l~~~~~~ 220 (375)
|.+.... ....+....+.+++..+.
T Consensus 157 y~~~v~~~~~~~~~~C~~~i~~a~~~ 182 (434)
T PF05577_consen 157 YFEVVTESLRKYGPNCYDAIRAAFDQ 182 (434)
T ss_dssp HHHHHHHHHHCCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 5543221 111222344555554443
No 94
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=87.35 E-value=0.88 Score=39.97 Aligned_cols=54 Identities=17% Similarity=0.185 Sum_probs=37.7
Q ss_pred HHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCccccchhh
Q 042842 126 AAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPVSQVAVH 196 (375)
Q Consensus 126 ~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~~q~~~~ 196 (375)
..+.+.+.. .....+.|+|.|.||.|+-.+|.+. +++. ++.||.+.|...+..+
T Consensus 47 ~~l~~~i~~---~~~~~~~liGSSlGG~~A~~La~~~-------------~~~a-vLiNPav~p~~~l~~~ 100 (187)
T PF05728_consen 47 AQLEQLIEE---LKPENVVLIGSSLGGFYATYLAERY-------------GLPA-VLINPAVRPYELLQDY 100 (187)
T ss_pred HHHHHHHHh---CCCCCeEEEEEChHHHHHHHHHHHh-------------CCCE-EEEcCCCCHHHHHHHh
Confidence 334444443 3344599999999999999988644 2555 6779999988766544
No 95
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=86.93 E-value=0.54 Score=38.36 Aligned_cols=37 Identities=14% Similarity=0.204 Sum_probs=28.0
Q ss_pred CCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCC
Q 042842 139 KNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 139 ~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~i 187 (375)
..++++|+|.|.||..+..++.+- . .+++++.-+|+.
T Consensus 59 ~~~~i~l~G~S~Gg~~a~~~~~~~----~--------~v~~~v~~~~~~ 95 (145)
T PF12695_consen 59 DPDRIILIGHSMGGAIAANLAARN----P--------RVKAVVLLSPYP 95 (145)
T ss_dssp TCCEEEEEEETHHHHHHHHHHHHS----T--------TESEEEEESESS
T ss_pred CCCcEEEEEEccCcHHHHHHhhhc----c--------ceeEEEEecCcc
Confidence 357899999999999777777622 2 288888888853
No 96
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=86.82 E-value=2.9 Score=43.10 Aligned_cols=114 Identities=23% Similarity=0.230 Sum_probs=65.6
Q ss_pred CCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccc----------cceecCCCccceeec
Q 042842 38 SQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISG----------IVFLDNPIGTGLSFA 107 (375)
Q Consensus 38 ~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an----------~l~iDqP~GtGfS~~ 107 (375)
+..|++|.+-||||. +++.|.++|.+..- |++||. .|+-----
T Consensus 640 kkYptvl~VYGGP~V--------------------------QlVnnsfkgi~ylR~~~LaslGy~Vv~IDn-RGS~hRGl 692 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGV--------------------------QLVNNSFKGIQYLRFCRLASLGYVVVFIDN-RGSAHRGL 692 (867)
T ss_pred CCCceEEEEcCCCce--------------------------EEeeccccceehhhhhhhhhcceEEEEEcC-CCccccch
Confidence 458999999999998 89999999987644 578884 44321100
Q ss_pred cCCCCCCC--ChHHHHHHHHHHHHHHHhhCCCCCC-CCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecC
Q 042842 108 VTNDEIPR--NQSSVAKHLFAAINGFIDLDPLFKN-RPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGN 184 (375)
Q Consensus 108 ~~~~~~~~--~~~~~a~~~~~fl~~f~~~~p~~~~-~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGN 184 (375)
.=.+.+.. .+.+ ++|=.+.||-.-++.- |.+ ..+-|-|-||||...- ..+.+-.++ +|-.+-|.
T Consensus 693 kFE~~ik~kmGqVE-~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGGYLSl----m~L~~~P~I-------frvAIAGa 759 (867)
T KOG2281|consen 693 KFESHIKKKMGQVE-VEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGGYLSL----MGLAQYPNI-------FRVAIAGA 759 (867)
T ss_pred hhHHHHhhccCeee-ehhhHHHHHHHHHhcC-cccchheeEeccccccHHHH----HHhhcCcce-------eeEEeccC
Confidence 00000000 1111 2222355554444432 333 4689999999997543 333332221 56666788
Q ss_pred CCCCccc
Q 042842 185 GLTDPVS 191 (375)
Q Consensus 185 g~idp~~ 191 (375)
++++...
T Consensus 760 pVT~W~~ 766 (867)
T KOG2281|consen 760 PVTDWRL 766 (867)
T ss_pred cceeeee
Confidence 8887654
No 97
>PLN02571 triacylglycerol lipase
Probab=86.70 E-value=1.8 Score=42.58 Aligned_cols=70 Identities=9% Similarity=0.060 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCC---CCceeecceeeecCCCCC
Q 042842 118 SSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVP---VSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 118 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~---~~~~inLkGi~IGNg~id 188 (375)
..+.++++..|+.+++.+|.. ..+++|+|||.||-.+-..|..|....-..+ ....+++..+..|.|-+-
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVG 276 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVG 276 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCcc
Confidence 456788899999999888764 4579999999999999998888865421100 012344566667776553
No 98
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=86.60 E-value=1.3 Score=47.61 Aligned_cols=84 Identities=18% Similarity=0.199 Sum_probs=53.4
Q ss_pred cccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCC--------------CCCCCCEEEEecCCCccc
Q 042842 89 RISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDP--------------LFKNRPIYVTGESYAGKS 154 (375)
Q Consensus 89 ~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p--------------~~~~~~~~i~GESYgG~y 154 (375)
+=.++++.| ..|+|-|.+.- ..-..+..+|... +.+|+.... ...+-.+-++|.||||..
T Consensus 278 rGYaVV~~D-~RGtg~SeG~~----~~~~~~E~~D~~~-vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 278 RGFAVVYVS-GIGTRGSDGCP----TTGDYQEIESMKA-VIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred CCeEEEEEc-CCCCCCCCCcC----ccCCHHHHHHHHH-HHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 346799999 79999996532 1122234445544 334665321 233568999999999987
Q ss_pred chHHHHHHHHhccCCCCCceeecceeeecCCCCCc
Q 042842 155 IPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDP 189 (375)
Q Consensus 155 vp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp 189 (375)
.-.+|..-. -.||.|+-..|+.|.
T Consensus 352 ~~~aAa~~p-----------p~LkAIVp~a~is~~ 375 (767)
T PRK05371 352 PNAVATTGV-----------EGLETIIPEAAISSW 375 (767)
T ss_pred HHHHHhhCC-----------CcceEEEeeCCCCcH
Confidence 776664221 138899888777663
No 99
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=86.59 E-value=0.61 Score=43.52 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=29.6
Q ss_pred CCeEEEEEcCCcccCCCCCcHHHHHHHHHHHcC
Q 042842 333 GNLSNAVVLGAGHLMPADQPLISQTMIEDWVLD 365 (375)
Q Consensus 333 ~~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~g 365 (375)
.+..++.|.+|||+++.++|++..+.|.+|+..
T Consensus 261 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 261 AVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred CccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 346789999999999999999999999999964
No 100
>COG0400 Predicted esterase [General function prediction only]
Probab=86.55 E-value=4.6 Score=36.03 Aligned_cols=80 Identities=10% Similarity=-0.016 Sum_probs=48.7
Q ss_pred CCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecc
Q 042842 99 PIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLH 178 (375)
Q Consensus 99 P~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLk 178 (375)
+....|+......--..+....+..+.+||....+.+. ...+++++.|-|=|+.++-.+..+.-+ .++
T Consensus 58 g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~~~~-----------~~~ 125 (207)
T COG0400 58 GGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYG-IDSSRIILIGFSQGANIALSLGLTLPG-----------LFA 125 (207)
T ss_pred CcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhC-CChhheEEEecChHHHHHHHHHHhCch-----------hhc
Confidence 34445555432211122334445566777777776653 446789999999999887666643322 377
Q ss_pred eeeecCCCCCcc
Q 042842 179 GVAIGNGLTDPV 190 (375)
Q Consensus 179 Gi~IGNg~idp~ 190 (375)
|+++-.|..-+.
T Consensus 126 ~ail~~g~~~~~ 137 (207)
T COG0400 126 GAILFSGMLPLE 137 (207)
T ss_pred cchhcCCcCCCC
Confidence 888777776443
No 101
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=86.16 E-value=1.1 Score=37.55 Aligned_cols=43 Identities=21% Similarity=0.291 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHh
Q 042842 120 VAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 120 ~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
++..+...+++....+| ..+++|+|+|.||..+-.++.++.++
T Consensus 10 ~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 10 LANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 34444455555555455 55899999999999999999988765
No 102
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=85.89 E-value=1.1 Score=40.03 Aligned_cols=58 Identities=21% Similarity=0.208 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCcc
Q 042842 120 VAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 120 ~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~ 190 (375)
+++.+.+++....+.. ...++++|.|-|=||..+-.++.+.- -.|.|++.-+|++-+.
T Consensus 86 s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~p-----------~~~~gvv~lsG~~~~~ 143 (216)
T PF02230_consen 86 SAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRYP-----------EPLAGVVALSGYLPPE 143 (216)
T ss_dssp HHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCTS-----------STSSEEEEES---TTG
T ss_pred HHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHcC-----------cCcCEEEEeecccccc
Confidence 3444444444444332 45678999999999988777764221 1388999888887443
No 103
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=85.27 E-value=1.8 Score=38.98 Aligned_cols=57 Identities=14% Similarity=0.236 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCC
Q 042842 122 KHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 122 ~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~i 187 (375)
.++...++...+.+| +.+++++|+|-||-.+-.+|..+.++. ...+++.+..|.|-+
T Consensus 112 ~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~------~~~~i~~~tFg~P~v 168 (229)
T cd00519 112 NQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG------PGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC------CCCceEEEEeCCCCC
Confidence 334445555555555 568999999999999998888887653 123477888888766
No 104
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=84.83 E-value=0.55 Score=41.54 Aligned_cols=64 Identities=11% Similarity=0.091 Sum_probs=48.9
Q ss_pred CCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCc
Q 042842 114 PRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDP 189 (375)
Q Consensus 114 ~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp 189 (375)
..+.+++..++.++++--++.+|.- +.+-+.|+|-|.|.+..+..++.+ ++ +.|+++-+|+.+-
T Consensus 111 ~htL~qt~~~~~~gv~filk~~~n~--k~l~~gGHSaGAHLa~qav~R~r~--pr--------I~gl~l~~GvY~l 174 (270)
T KOG4627|consen 111 VHTLEQTMTQFTHGVNFILKYTENT--KVLTFGGHSAGAHLAAQAVMRQRS--PR--------IWGLILLCGVYDL 174 (270)
T ss_pred cccHHHHHHHHHHHHHHHHHhcccc--eeEEEcccchHHHHHHHHHHHhcC--ch--------HHHHHHHhhHhhH
Confidence 3577888889999888777877643 349999999999988887777522 22 7899999998763
No 105
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=84.21 E-value=1 Score=40.30 Aligned_cols=79 Identities=14% Similarity=0.206 Sum_probs=58.1
Q ss_pred ccccceecCCCccceeeccCC-CCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccC
Q 042842 90 ISGIVFLDNPIGTGLSFAVTN-DEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKR 168 (375)
Q Consensus 90 ~an~l~iDqP~GtGfS~~~~~-~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~ 168 (375)
..||+-+| =.|-|-|.+... .++. .|. ++...++...|...++++.++|-|-||.-+-.+|+.-.+.
T Consensus 106 ~mnv~ivs-YRGYG~S~GspsE~GL~-lDs-------~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~r--- 173 (300)
T KOG4391|consen 106 KMNVLIVS-YRGYGKSEGSPSEEGLK-LDS-------EAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR--- 173 (300)
T ss_pred CceEEEEE-eeccccCCCCcccccee-ccH-------HHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhh---
Confidence 46788888 599999975432 2222 222 3344566778899999999999999999998888755443
Q ss_pred CCCCceeecceeeecCCCCC
Q 042842 169 VPVSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 169 ~~~~~~inLkGi~IGNg~id 188 (375)
+.++++-|-+++
T Consensus 174 --------i~~~ivENTF~S 185 (300)
T KOG4391|consen 174 --------ISAIIVENTFLS 185 (300)
T ss_pred --------eeeeeeechhcc
Confidence 889999998875
No 106
>PLN02965 Probable pheophorbidase
Probab=84.11 E-value=0.74 Score=42.03 Aligned_cols=31 Identities=13% Similarity=-0.045 Sum_probs=27.7
Q ss_pred CeEEEEEcCCcccCCCCCcHHHHHHHHHHHc
Q 042842 334 NLSNAVVLGAGHLMPADQPLISQTMIEDWVL 364 (375)
Q Consensus 334 ~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~ 364 (375)
+-+++.+.+|||++..++|++...+|.+|+.
T Consensus 221 ~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~ 251 (255)
T PLN02965 221 PAQTYVLEDSDHSAFFSVPTTLFQYLLQAVS 251 (255)
T ss_pred cceEEEecCCCCchhhcCHHHHHHHHHHHHH
Confidence 4456888999999999999999999999985
No 107
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=83.47 E-value=0.78 Score=44.09 Aligned_cols=32 Identities=13% Similarity=-0.040 Sum_probs=28.3
Q ss_pred CeEEEEEcC-CcccCCCCCcHHHHHHHHHHHcC
Q 042842 334 NLSNAVVLG-AGHLMPADQPLISQTMIEDWVLD 365 (375)
Q Consensus 334 ~ltf~~V~~-AGH~vP~dqP~~~~~mi~~fl~g 365 (375)
+-.+++|.+ |||+++.++|++...+|..||..
T Consensus 306 ~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 306 RGSLRVLRSPYGHDAFLKETDRIDAILTTALRS 338 (343)
T ss_pred CCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHh
Confidence 556788874 99999999999999999999964
No 108
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=83.28 E-value=0.61 Score=43.28 Aligned_cols=82 Identities=21% Similarity=0.222 Sum_probs=55.3
Q ss_pred ccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCC
Q 042842 92 GIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPV 171 (375)
Q Consensus 92 n~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~ 171 (375)
.+|..| ..|+|-|.+.-. ....+.++|.++. .+|+...| ..+-++-++|.||+|.....+|..-
T Consensus 59 ~vV~~D-~RG~g~S~G~~~----~~~~~e~~D~~d~-I~W~~~Qp-ws~G~VGm~G~SY~G~~q~~~A~~~--------- 122 (272)
T PF02129_consen 59 AVVVQD-VRGTGGSEGEFD----PMSPNEAQDGYDT-IEWIAAQP-WSNGKVGMYGISYGGFTQWAAAARR--------- 122 (272)
T ss_dssp EEEEEE--TTSTTS-S-B-----TTSHHHHHHHHHH-HHHHHHCT-TEEEEEEEEEETHHHHHHHHHHTTT---------
T ss_pred EEEEEC-CcccccCCCccc----cCChhHHHHHHHH-HHHHHhCC-CCCCeEEeeccCHHHHHHHHHHhcC---------
Confidence 588899 799999965422 2145566777664 47887765 4455799999999998887777511
Q ss_pred CceeecceeeecCCCCCccc
Q 042842 172 SKREKLHGVAIGNGLTDPVS 191 (375)
Q Consensus 172 ~~~inLkGi~IGNg~idp~~ 191 (375)
.-.||.|+..-+..|...
T Consensus 123 --~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 --PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ---TTEEEEEEESE-SBTCC
T ss_pred --CCCceEEEecccCCcccc
Confidence 122999998888777554
No 109
>PRK03592 haloalkane dehalogenase; Provisional
Probab=83.24 E-value=0.75 Score=42.91 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=30.7
Q ss_pred CCeEEEEEcCCcccCCCCCcHHHHHHHHHHHcCCC
Q 042842 333 GNLSNAVVLGAGHLMPADQPLISQTMIEDWVLDKG 367 (375)
Q Consensus 333 ~~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~g~~ 367 (375)
++.++.++.+|||+++.++|+++.+.|..|+....
T Consensus 256 ~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 256 NQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred hhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhc
Confidence 46678888999999999999999999999997543
No 110
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=82.73 E-value=1.8 Score=38.56 Aligned_cols=45 Identities=13% Similarity=0.111 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHh
Q 042842 119 SVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
-+-.|+.+++..|++.+++ +|||.|+|||=|+..+-.|-+...+.
T Consensus 75 ~ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~~~~ 119 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEEIAG 119 (207)
T ss_pred hhHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHHhcC
Confidence 4567888999999998764 89999999999998777666655444
No 111
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=82.29 E-value=2.3 Score=39.58 Aligned_cols=40 Identities=23% Similarity=0.243 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccch
Q 042842 117 QSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIP 156 (375)
Q Consensus 117 ~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp 156 (375)
-.+++..|.+++..-....|+=..=++||+|||-|..=+-
T Consensus 85 a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~ 124 (289)
T PF10081_consen 85 AREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGE 124 (289)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchh
Confidence 3667888999999988888876555699999998765433
No 112
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=81.39 E-value=1.1 Score=44.19 Aligned_cols=32 Identities=16% Similarity=0.021 Sum_probs=28.1
Q ss_pred CeEEEEEcCCcccCCCCCcHHHHHHHHHHHcC
Q 042842 334 NLSNAVVLGAGHLMPADQPLISQTMIEDWVLD 365 (375)
Q Consensus 334 ~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~g 365 (375)
...++.|.+|||+++.|+|+...+++.+|+.+
T Consensus 353 ~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~ 384 (402)
T PLN02894 353 PCEIIRVPQGGHFVFLDNPSGFHSAVLYACRK 384 (402)
T ss_pred CCcEEEeCCCCCeeeccCHHHHHHHHHHHHHH
Confidence 35689999999999999999999999888853
No 113
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=80.81 E-value=1.4 Score=42.56 Aligned_cols=134 Identities=13% Similarity=0.056 Sum_probs=69.6
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhc-ccCcEEcCCCCCcccccccc-cCCCccccccccceec
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLE-VGPWRVTHRPNTTQQQLALE-PNLGSWNRISGIVFLD 97 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e-~GP~~~~~~~~~~~~~~~~~-~n~~sW~~~an~l~iD 97 (375)
+..++|.-+...+ ...+|.||.++|=+|.+-... ..+ ..|=.++. +. ....--.+...||-+|
T Consensus 15 ~~~~~y~~~g~~~----~~~~~~vll~Hg~~~~~~~~~-~~~~~~~~~w~~----------~~~~~~~l~~~~~~vi~~D 79 (351)
T TIGR01392 15 DVRVAYETYGTLN----AERSNAVLVCHALTGDAHVAG-YHDDGDPGWWDD----------LIGPGRAIDTDRYFVVCSN 79 (351)
T ss_pred CceEEEEeccccC----CCCCCEEEEcCCcCcchhhcc-cCCCCCCCchhh----------ccCCCCCcCCCceEEEEec
Confidence 5688888765321 134688999998766543210 000 00100100 00 0000001345799999
Q ss_pred CCCc--cceeeccC--CCC-------CCCChHHHHHHHHHHHHHHHhhCCCCCCCC-EEEEecCCCcccchHHHHHHHHh
Q 042842 98 NPIG--TGLSFAVT--NDE-------IPRNQSSVAKHLFAAINGFIDLDPLFKNRP-IYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 98 qP~G--tGfS~~~~--~~~-------~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~-~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
.| | .|-|-..+ +.+ ...+.++.++++..++ +. +.-.+ ++|+|+|+||..+-.+|.+--+
T Consensus 80 ~~-G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---l~~~~~~~l~G~S~Gg~ia~~~a~~~p~- 150 (351)
T TIGR01392 80 VL-GGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLL----DH---LGIEQIAAVVGGSMGGMQALEWAIDYPE- 150 (351)
T ss_pred CC-CCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHH----HH---cCCCCceEEEEECHHHHHHHHHHHHChH-
Confidence 65 5 55442111 000 1233444555554444 33 22345 9999999999888877765322
Q ss_pred ccCCCCCceeecceeeecCCCC
Q 042842 166 NKRVPVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 166 n~~~~~~~~inLkGi~IGNg~i 187 (375)
.++++++.++..
T Consensus 151 ----------~v~~lvl~~~~~ 162 (351)
T TIGR01392 151 ----------RVRAIVVLATSA 162 (351)
T ss_pred ----------hhheEEEEccCC
Confidence 278888877654
No 114
>KOG3101 consensus Esterase D [General function prediction only]
Probab=80.73 E-value=19 Score=32.33 Aligned_cols=185 Identities=14% Similarity=0.181 Sum_probs=88.3
Q ss_pred CCCcceeeeecCC----CCCceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHH-----h---HhhhcccCcEEcCCCC
Q 042842 5 AFPTRSGYLPVSP----ATGSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSM-----L---GNFLEVGPWRVTHRPN 72 (375)
Q Consensus 5 ~~~~~sGy~~v~~----~~~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~-----~---g~f~e~GP~~~~~~~~ 72 (375)
+.+.+-|+..|-. +.+-.|=|--|--... .+-+.-|+++||.| --|.-. . -.-.+.|=..|.+|.+
T Consensus 6 snk~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a-~~~k~~P~lf~LSG-LTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTS 83 (283)
T KOG3101|consen 6 SNKCFGGRQKVYKHNSNTLKCSMTFGVYLPPDA-PRGKRCPVLFYLSG-LTCTHENFIEKSGFQQQASKHGLAVVAPDTS 83 (283)
T ss_pred ccccccceeeeeeccccccccceEEEEecCCCc-ccCCcCceEEEecC-CcccchhhHhhhhHHHhHhhcCeEEECCCCC
Confidence 4555667776632 2233454444432221 12234699999997 345321 1 1123566667777742
Q ss_pred CcccccccccCCCccccccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHh-hCCCCCCCCEEEEecCCC
Q 042842 73 TTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFID-LDPLFKNRPIYVTGESYA 151 (375)
Q Consensus 73 ~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~-~~p~~~~~~~~i~GESYg 151 (375)
-++- ...--+-||.- =.|.||=-..+.+.+..+- ..-+.+.+-|-+-+. .+-.+-..+.-|+|+|+|
T Consensus 84 PRG~--~v~g~~eswDF---------G~GAGFYvnAt~epw~~~y-rMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMG 151 (283)
T KOG3101|consen 84 PRGV--EVAGDDESWDF---------GQGAGFYVNATQEPWAKHY-RMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMG 151 (283)
T ss_pred CCcc--ccCCCcccccc---------cCCceeEEecccchHhhhh-hHHHHHHHHHHHHhccccccccchhcceeccccC
Confidence 1111 22333457743 5677775433333333322 122222222323232 222233445899999999
Q ss_pred cccchHHHHHHHHhccCCCCCceeecceeeecCCCCCccccchhhhHHHhhcCCCCHHHHHHHH
Q 042842 152 GKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPVSQVAVHALNAYFIGLINGRQRVELE 215 (375)
Q Consensus 152 G~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~~q~~~~~~~~~~~gli~~~~~~~l~ 215 (375)
||=+-.++.+ |. =..|+|---.|.++|...-=..-.|.-++|= ++.++++..
T Consensus 152 GhGAl~~~Lk----n~-------~kykSvSAFAPI~NP~~cpWGqKAf~gYLG~-~ka~W~~yD 203 (283)
T KOG3101|consen 152 GHGALTIYLK----NP-------SKYKSVSAFAPICNPINCPWGQKAFTGYLGD-NKAQWEAYD 203 (283)
T ss_pred CCceEEEEEc----Cc-------ccccceeccccccCcccCcchHHHhhcccCC-ChHHHhhcc
Confidence 9976555421 21 1256666566666665432111223323443 455555443
No 115
>PRK07581 hypothetical protein; Validated
Probab=80.08 E-value=1.8 Score=41.36 Aligned_cols=129 Identities=17% Similarity=0.143 Sum_probs=69.5
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCC
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNP 99 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP 99 (375)
+..++|--+... .+...|+||.++|++|.+.+.......|| .+. .+...||-+|.
T Consensus 25 ~~~l~y~~~G~~----~~~~~~~vll~~~~~~~~~~~~~~~~~~~--------------~l~------~~~~~vi~~D~- 79 (339)
T PRK07581 25 DARLAYKTYGTL----NAAKDNAILYPTWYSGTHQDNEWLIGPGR--------------ALD------PEKYFIIIPNM- 79 (339)
T ss_pred CceEEEEecCcc----CCCCCCEEEEeCCCCCCcccchhhccCCC--------------ccC------cCceEEEEecC-
Confidence 456776554321 13456888887665555444311111111 121 13467999995
Q ss_pred CccceeeccCCCCCCCCh-----HHHHHHHHHHHHHHHhhCCCCCCCC-EEEEecCCCcccchHHHHHHHHhccCCCCCc
Q 042842 100 IGTGLSFAVTNDEIPRNQ-----SSVAKHLFAAINGFIDLDPLFKNRP-IYVTGESYAGKSIPSIGYHILKQNKRVPVSK 173 (375)
Q Consensus 100 ~GtGfS~~~~~~~~~~~~-----~~~a~~~~~fl~~f~~~~p~~~~~~-~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~ 173 (375)
.|.|.|........+.+. ...++++........+. +.-.+ .+|+|.|+||..+-.+|.+--+.
T Consensus 80 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---lgi~~~~~lvG~S~GG~va~~~a~~~P~~-------- 148 (339)
T PRK07581 80 FGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK---FGIERLALVVGWSMGAQQTYHWAVRYPDM-------- 148 (339)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH---hCCCceEEEEEeCHHHHHHHHHHHHCHHH--------
Confidence 699998532211001111 12455554322223232 23346 57999999999999888765443
Q ss_pred eeecceeeecCCCC
Q 042842 174 REKLHGVAIGNGLT 187 (375)
Q Consensus 174 ~inLkGi~IGNg~i 187 (375)
++++++.++..
T Consensus 149 ---V~~Lvli~~~~ 159 (339)
T PRK07581 149 ---VERAAPIAGTA 159 (339)
T ss_pred ---HhhheeeecCC
Confidence 77777766543
No 116
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=79.11 E-value=3.8 Score=36.00 Aligned_cols=64 Identities=16% Similarity=0.217 Sum_probs=50.5
Q ss_pred CChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCC
Q 042842 115 RNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 115 ~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~id 188 (375)
++.+++|.|+-+.++.+.++ ...+.+.|+|-|+|.=.+|.+..++-..-+ =.+++|.+..+-..
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~r-------~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAALR-------ARVAQVVLLSPSTT 108 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHHH-------hheeEEEEeccCCc
Confidence 57789999999999888875 457889999999999999999998866532 23677776665443
No 117
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=79.02 E-value=14 Score=36.32 Aligned_cols=32 Identities=9% Similarity=0.037 Sum_probs=29.3
Q ss_pred CeEEEEEcC-CcccCCCCCcHHHHHHHHHHHcC
Q 042842 334 NLSNAVVLG-AGHLMPADQPLISQTMIEDWVLD 365 (375)
Q Consensus 334 ~ltf~~V~~-AGH~vP~dqP~~~~~mi~~fl~g 365 (375)
+.++..|.+ +||+.+.++|+.....|.+|+..
T Consensus 355 ~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 355 YAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 578899985 99999999999999999999965
No 118
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=78.98 E-value=3.3 Score=40.58 Aligned_cols=62 Identities=18% Similarity=0.133 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHhhCCCCCC-CCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCccc
Q 042842 119 SVAKHLFAAINGFIDLDPLFKN-RPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPVS 191 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~~p~~~~-~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~~ 191 (375)
-.|.|...+|..-...+|...+ .|+...|.||||. ...++.+|.= -.+.||+=-.+++-|..
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~y-la~l~~k~aP----------~~~~~~iDns~~~~p~l 223 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGY-LAHLCAKIAP----------WLFDGVIDNSSYALPPL 223 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHH-HHHHHHhhCc----------cceeEEEecCccccchh
Confidence 3588888999888888998875 7999999999984 4444444422 23555555556665543
No 119
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=78.83 E-value=4.1 Score=37.05 Aligned_cols=68 Identities=9% Similarity=0.048 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCccc
Q 042842 119 SVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPVS 191 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~~ 191 (375)
..+..|.+||+...+. -..++++|.+||+|+..+-..-..+...... ....-+|..|++.+|-+|...
T Consensus 74 ~s~~~l~~~L~~L~~~---~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~--~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 74 FSGPALARFLRDLARA---PGIKRIHILAHSMGNRVLLEALRQLASEGER--PDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred HHHHHHHHHHHHHHhc---cCCceEEEEEeCchHHHHHHHHHHHHhcccc--hhhHhhhheEEEECCCCCHHH
Confidence 3445555555544433 1367899999999999988888888776431 011236889999999888643
No 120
>PRK13604 luxD acyl transferase; Provisional
Probab=78.70 E-value=11 Score=35.77 Aligned_cols=124 Identities=13% Similarity=0.052 Sum_probs=68.1
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCC
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNP 99 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP 99 (375)
+..|.=|+....+. +++..|++|...| .|+.... +...-- .+ +.+=.++|-.|.=
T Consensus 19 G~~L~Gwl~~P~~~--~~~~~~~vIi~HG-f~~~~~~--~~~~A~--------------~L------a~~G~~vLrfD~r 73 (307)
T PRK13604 19 GQSIRVWETLPKEN--SPKKNNTILIASG-FARRMDH--FAGLAE--------------YL------SSNGFHVIRYDSL 73 (307)
T ss_pred CCEEEEEEEcCccc--CCCCCCEEEEeCC-CCCChHH--HHHHHH--------------HH------HHCCCEEEEecCC
Confidence 67888898876532 3456788877665 5664310 000000 11 1233467777843
Q ss_pred CccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecce
Q 042842 100 IGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHG 179 (375)
Q Consensus 100 ~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkG 179 (375)
-|.|-|-+.- .+...+. ...|+ ....+|++.. ...++.|.|+|.||.-+...|. ..++++
T Consensus 74 g~~GeS~G~~-~~~t~s~--g~~Dl-~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~-------------~~~v~~ 133 (307)
T PRK13604 74 HHVGLSSGTI-DEFTMSI--GKNSL-LTVVDWLNTR---GINNLGLIAASLSARIAYEVIN-------------EIDLSF 133 (307)
T ss_pred CCCCCCCCcc-ccCcccc--cHHHH-HHHHHHHHhc---CCCceEEEEECHHHHHHHHHhc-------------CCCCCE
Confidence 3457773221 1111122 23444 3334455443 1357999999999977433331 123889
Q ss_pred eeecCCCCC
Q 042842 180 VAIGNGLTD 188 (375)
Q Consensus 180 i~IGNg~id 188 (375)
+++..|+.+
T Consensus 134 lI~~sp~~~ 142 (307)
T PRK13604 134 LITAVGVVN 142 (307)
T ss_pred EEEcCCccc
Confidence 999999987
No 121
>PF03283 PAE: Pectinacetylesterase
Probab=78.38 E-value=15 Score=35.74 Aligned_cols=138 Identities=14% Similarity=0.045 Sum_probs=70.1
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhH----hhhcccCcEEcCCCCCcccc--cccccCCCcccccccc
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLG----NFLEVGPWRVTHRPNTTQQQ--LALEPNLGSWNRISGI 93 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g----~f~e~GP~~~~~~~~~~~~~--~~~~~n~~sW~~~an~ 93 (375)
|+.-.|++-+... ...+-+||.|+||=-|-+..- ..++.|...--+......+. .....||.= ...|+
T Consensus 34 GS~~~yy~~~g~g----~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f--~~wN~ 107 (361)
T PF03283_consen 34 GSPPGYYFRPGSG----SGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDF--YNWNH 107 (361)
T ss_pred CCCCcEEEccCCC----CCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCcc--ccccE
Confidence 3455566655532 246789999999988866432 22344433211110000000 123456621 22567
Q ss_pred ceecCCCccceeeccCCCCCCC---ChHHHHHHHHHHHHHHHhhCCCCC-CCCEEEEecCCCcccchHHHHHHHHhc
Q 042842 94 VFLDNPIGTGLSFAVTNDEIPR---NQSSVAKHLFAAINGFIDLDPLFK-NRPIYVTGESYAGKSIPSIGYHILKQN 166 (375)
Q Consensus 94 l~iDqP~GtGfS~~~~~~~~~~---~~~~~a~~~~~fl~~f~~~~p~~~-~~~~~i~GESYgG~yvp~~a~~i~~~n 166 (375)
+||=.=.|.-|+ .+...... +..-....+++++.+++... .+. ..++.|+|.|-||.=+..-+.++.+.-
T Consensus 108 V~vpYC~Gd~~~--G~~~~~~~~~~~l~frG~~i~~avl~~l~~~-gl~~a~~vlltG~SAGG~g~~~~~d~~~~~l 181 (361)
T PF03283_consen 108 VFVPYCDGDSHS--GDVEPVDYGGTTLYFRGYRILRAVLDDLLSN-GLPNAKQVLLTGCSAGGLGAILHADYVRDRL 181 (361)
T ss_pred EEEEecCCcccc--CcccccccCCceeEeecHHHHHHHHHHHHHh-cCcccceEEEeccChHHHHHHHHHHHHHHHh
Confidence 787433333333 22211111 11112234445555554332 232 357999999999998888888887753
No 122
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=78.36 E-value=4.9 Score=40.23 Aligned_cols=40 Identities=8% Similarity=0.087 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHH
Q 042842 118 SSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGY 160 (375)
Q Consensus 118 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~ 160 (375)
++..+++.+.++..++.. ..+++.|+|+|+||..+-.++.
T Consensus 142 ~~~~~~Lk~lIe~~~~~~---g~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 142 PETMDGLKKKLETVYKAS---GGKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHHHHHHc---CCCCEEEEEECHhHHHHHHHHH
Confidence 345667777777777654 3579999999999987766654
No 123
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.28 E-value=3.4 Score=37.77 Aligned_cols=42 Identities=26% Similarity=0.441 Sum_probs=27.2
Q ss_pred ChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhc
Q 042842 116 NQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQN 166 (375)
Q Consensus 116 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n 166 (375)
+.++..++=++|++++.- +++++||.|+|-|...+ .+|+..+
T Consensus 90 sL~~QV~HKlaFik~~~P-----k~~ki~iiGHSiGaYm~----Lqil~~~ 131 (301)
T KOG3975|consen 90 SLQDQVDHKLAFIKEYVP-----KDRKIYIIGHSIGAYMV----LQILPSI 131 (301)
T ss_pred chhhHHHHHHHHHHHhCC-----CCCEEEEEecchhHHHH----HHHhhhc
Confidence 344455555677776653 48899999999986544 4444443
No 124
>PLN02753 triacylglycerol lipase
Probab=77.98 E-value=6.1 Score=40.09 Aligned_cols=72 Identities=15% Similarity=0.134 Sum_probs=49.8
Q ss_pred ChHHHHHHHHHHHHHHHhhCCC--CCCCCEEEEecCCCcccchHHHHHHHHhccCC-CCCceeecceeeecCCCC
Q 042842 116 NQSSVAKHLFAAINGFIDLDPL--FKNRPIYVTGESYAGKSIPSIGYHILKQNKRV-PVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 116 ~~~~~a~~~~~fl~~f~~~~p~--~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~-~~~~~inLkGi~IGNg~i 187 (375)
+...+.++++..|+..++.+|. .....++|+|||.||-.+-..|..|....-.. .....+++.-+..|.|-+
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRV 359 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRV 359 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCc
Confidence 4456788999999999988763 23568999999999999999998887642110 011234455566666655
No 125
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=77.90 E-value=2 Score=41.99 Aligned_cols=31 Identities=13% Similarity=-0.019 Sum_probs=28.0
Q ss_pred eEEEEEc-CCcccCCCCCcHHHHHHHHHHHcC
Q 042842 335 LSNAVVL-GAGHLMPADQPLISQTMIEDWVLD 365 (375)
Q Consensus 335 ltf~~V~-~AGH~vP~dqP~~~~~mi~~fl~g 365 (375)
.+++.|. ++||+.++++|+...+.|.+||..
T Consensus 342 ~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~ 373 (379)
T PRK00175 342 VSYAEIDSPYGHDAFLLDDPRYGRLVRAFLER 373 (379)
T ss_pred eEEEEeCCCCCchhHhcCHHHHHHHHHHHHHh
Confidence 4778886 999999999999999999999965
No 126
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=77.80 E-value=0.47 Score=45.64 Aligned_cols=70 Identities=14% Similarity=0.088 Sum_probs=47.7
Q ss_pred ccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHH
Q 042842 90 ISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILK 164 (375)
Q Consensus 90 ~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~ 164 (375)
-.|||-||--.+..-.|.. ...+...+++.+..||+...... .+.-.++||+|+|-|+|.+-.+++++..
T Consensus 104 d~NVI~VDWs~~a~~~Y~~----a~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 104 DYNVIVVDWSRGASNNYPQ----AVANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp -EEEEEEE-HHHHSS-HHH----HHHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CceEEEEcchhhccccccc----hhhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 5799999976655544422 13456677888888877766432 2445689999999999999988888866
No 127
>PLN02719 triacylglycerol lipase
Probab=77.62 E-value=5.6 Score=40.23 Aligned_cols=71 Identities=14% Similarity=0.130 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHHHHHhhCCCC--CCCCEEEEecCCCcccchHHHHHHHHhccCC-CCCceeecceeeecCCCC
Q 042842 117 QSSVAKHLFAAINGFIDLDPLF--KNRPIYVTGESYAGKSIPSIGYHILKQNKRV-PVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 117 ~~~~a~~~~~fl~~f~~~~p~~--~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~-~~~~~inLkGi~IGNg~i 187 (375)
...+.++++..|+...+.+|.. ....++|+|+|.||-.+-..|..|.+..-.. .....+++.-+..|.|=+
T Consensus 272 k~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRV 345 (518)
T PLN02719 272 KFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRV 345 (518)
T ss_pred chhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCc
Confidence 3457788999999999888864 3457999999999999999999887642110 011123344555666654
No 128
>PLN02324 triacylglycerol lipase
Probab=77.59 E-value=6.4 Score=38.83 Aligned_cols=49 Identities=12% Similarity=0.105 Sum_probs=39.9
Q ss_pred ChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHh
Q 042842 116 NQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 116 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
+..++.+++...|+..++.+|.. ...++|+|||-||-.+-..|..|...
T Consensus 191 ~k~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 191 DTTSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred chhHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHh
Confidence 33467788889999999988753 34799999999999999999888764
No 129
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=77.40 E-value=2.1 Score=39.50 Aligned_cols=33 Identities=15% Similarity=0.248 Sum_probs=28.4
Q ss_pred eCCeEEEEEcCCcccCCCCCcHHHHHHHHHHHcC
Q 042842 332 FGNLSNAVVLGAGHLMPADQPLISQTMIEDWVLD 365 (375)
Q Consensus 332 ~~~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~g 365 (375)
..+.++++|. +|||.+.++|+...++|.+|+.+
T Consensus 233 ~~~~~~~~i~-~gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 233 IPNAELHIID-DGHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred CCCCEEEEEc-CCCchhhccHHHHHHHHHHHHHH
Confidence 4567777775 59999999999999999999964
No 130
>PLN02578 hydrolase
Probab=77.36 E-value=2.6 Score=40.68 Aligned_cols=32 Identities=16% Similarity=0.278 Sum_probs=27.3
Q ss_pred CCeEEEEEcCCcccCCCCCcHHHHHHHHHHHcC
Q 042842 333 GNLSNAVVLGAGHLMPADQPLISQTMIEDWVLD 365 (375)
Q Consensus 333 ~~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~g 365 (375)
.+..++.+ ++||+.+.++|++..+.|.+|+.+
T Consensus 323 p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~~ 354 (354)
T PLN02578 323 PDTTLVNL-QAGHCPHDEVPEQVNKALLEWLSS 354 (354)
T ss_pred CCCEEEEe-CCCCCccccCHHHHHHHHHHHHhC
Confidence 45566777 799999999999999999999953
No 131
>COG0627 Predicted esterase [General function prediction only]
Probab=77.16 E-value=5.1 Score=38.25 Aligned_cols=132 Identities=15% Similarity=0.156 Sum_probs=68.9
Q ss_pred CCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccC-CCccccccccceecCCCccceeeccCCCCCCCCh
Q 042842 39 QTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPN-LGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQ 117 (375)
Q Consensus 39 ~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n-~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~ 117 (375)
++--|+|+.+|..|.. -.+.+.++.+-..+... ..+.-+ -.-+....++-=|+ |.|.|.|+..+...-+...
T Consensus 52 ~~ipV~~~l~G~t~~~--~~~~~~~g~~~~a~~~g----~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~ 124 (316)
T COG0627 52 RDIPVLYLLSGLTCNE--PNVYLLDGLRRQADESG----WAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWAS 124 (316)
T ss_pred CCCCEEEEeCCCCCCC--CceEeccchhhhhhhcC----eEEecCCCCcccCCCCccccc-cCCCccceecccccCcccc
Confidence 4444555566688875 33444555543322110 011111 22244555666667 7999999865432211111
Q ss_pred HHHHHHHHHHHH-----HHHhhCCCCCC-CCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCcc
Q 042842 118 SSVAKHLFAAIN-----GFIDLDPLFKN-RPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 118 ~~~a~~~~~fl~-----~f~~~~p~~~~-~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~ 190 (375)
. ..+++.||. .+.+.||--++ ..-.|+|+|+||+=+-.+|.+-.++ ++.+.=-.|+++|.
T Consensus 125 ~--~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~-----------f~~~sS~Sg~~~~s 190 (316)
T COG0627 125 G--PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR-----------FKSASSFSGILSPS 190 (316)
T ss_pred C--ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch-----------hceecccccccccc
Confidence 1 123333332 44455653322 3688999999999888877655332 45555555555554
No 132
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=76.84 E-value=6.9 Score=39.27 Aligned_cols=33 Identities=18% Similarity=0.087 Sum_probs=23.8
Q ss_pred HHHHHHHHhhCCCCCCCCEEEEecCCCcccchHH
Q 042842 125 FAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSI 158 (375)
Q Consensus 125 ~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~ 158 (375)
++.+++....|-.= ...+-|+|||-|++-+-.+
T Consensus 165 LkWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 165 LKWVRDNIEAFGGD-PQNVTLFGESAGAASILTL 197 (491)
T ss_pred HHHHHHHHHHhCCC-ccceEEeeccchHHHHHHh
Confidence 46777777777432 4579999999999765444
No 133
>PRK04940 hypothetical protein; Provisional
Probab=76.23 E-value=5.6 Score=34.64 Aligned_cols=42 Identities=17% Similarity=0.134 Sum_probs=31.5
Q ss_pred CCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCccccchhh
Q 042842 141 RPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPVSQVAVH 196 (375)
Q Consensus 141 ~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~~q~~~~ 196 (375)
.++.|+|.|-||.|+-.+|.+. .++. +|.||.+.|...+..+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~-------------g~~a-VLiNPAv~P~~~L~~~ 101 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC-------------GIRQ-VIFNPNLFPEENMEGK 101 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH-------------CCCE-EEECCCCChHHHHHHH
Confidence 4799999999999999998753 2444 4569999997654443
No 134
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=74.93 E-value=18 Score=34.28 Aligned_cols=99 Identities=13% Similarity=0.106 Sum_probs=50.3
Q ss_pred ChHHHHHHHHHHHHHHHhhCCC-CCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCccccch
Q 042842 116 NQSSVAKHLFAAINGFIDLDPL-FKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPVSQVA 194 (375)
Q Consensus 116 ~~~~~a~~~~~fl~~f~~~~p~-~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~~q~~ 194 (375)
+.++-++++-.+++-+-..... +...++.|.|+|=|..=+-.+. ...+.. ...-.++|+++-.|+.|......
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl---~~~~~~---~~~~~VdG~ILQApVSDREa~~~ 155 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYL---SSPNPS---PSRPPVDGAILQAPVSDREAILN 155 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHH---HH-TT------CCCEEEEEEEEE---TTSTTT
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHH---hccCcc---ccccceEEEEEeCCCCChhHhhh
Confidence 4556677775555433333222 3467899999999987654444 444321 11345999999999888654322
Q ss_pred hhhHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCChhh
Q 042842 195 VHALNAYFIGLINGRQRVELEKAQRKAIRLVKMGSWSD 232 (375)
Q Consensus 195 ~~~~~~~~~gli~~~~~~~l~~~~~~~~~~i~~~~~~~ 232 (375)
.... .+.+++..+.+.+.+.+++-.+
T Consensus 156 ~~~~------------~~~~~~~v~~A~~~i~~g~~~~ 181 (303)
T PF08538_consen 156 FLGE------------REAYEELVALAKELIAEGKGDE 181 (303)
T ss_dssp SHHH---------------HHHHHHHHHHHHHCT-TT-
T ss_pred cccc------------hHHHHHHHHHHHHHHHcCCCCc
Confidence 2111 4455666666777777665443
No 135
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=74.13 E-value=18 Score=35.83 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=23.6
Q ss_pred CCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCC
Q 042842 141 RPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGL 186 (375)
Q Consensus 141 ~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~ 186 (375)
....|+|.|+||.-+-.++.+--+. +.+++...|-
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~-----------Fg~v~s~Sgs 322 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPER-----------FGCVLSQSGS 322 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCccc-----------ccEEEEeccc
Confidence 4689999999998776666432221 5666666654
No 136
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=73.97 E-value=8.8 Score=34.64 Aligned_cols=65 Identities=17% Similarity=0.156 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHhhC--CCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceee-ecCCCCCccc
Q 042842 119 SVAKHLFAAINGFIDLD--PLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVA-IGNGLTDPVS 191 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~~--p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~-IGNg~idp~~ 191 (375)
+.++.+.++++..++.+ ..-..+++.|+|||+||.-+-.+.. .... ..-++++|+ +|.|...+..
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~-~~~~-------~~~~v~~iitl~tPh~g~~~ 128 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALS-LPNY-------DPDSVKTIITLGTPHRGSPL 128 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHh-cccc-------ccccEEEEEEEcCCCCCccc
Confidence 45566666666666554 1234678999999999964433332 1111 112366665 7888766543
No 137
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=72.76 E-value=3.9 Score=40.24 Aligned_cols=53 Identities=13% Similarity=0.019 Sum_probs=34.1
Q ss_pred ChHHHHHHHHHHHHHHHhhCCCCCCCCEE-EEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCC
Q 042842 116 NQSSVAKHLFAAINGFIDLDPLFKNRPIY-VTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGL 186 (375)
Q Consensus 116 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~-i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~ 186 (375)
+..+.++++..+ ++. +.-++++ |+|.|+||..+-.+|.+--+. ++++++.++.
T Consensus 142 t~~d~~~~~~~l----l~~---lgi~~~~~vvG~SmGG~ial~~a~~~P~~-----------v~~lv~ia~~ 195 (389)
T PRK06765 142 TILDFVRVQKEL----IKS---LGIARLHAVMGPSMGGMQAQEWAVHYPHM-----------VERMIGVIGN 195 (389)
T ss_pred cHHHHHHHHHHH----HHH---cCCCCceEEEEECHHHHHHHHHHHHChHh-----------hheEEEEecC
Confidence 444445554444 443 2345676 999999999888888655443 7777776654
No 138
>PLN02408 phospholipase A1
Probab=70.88 E-value=8.3 Score=37.49 Aligned_cols=46 Identities=15% Similarity=0.112 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHh
Q 042842 119 SVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
.+.+++.+.|+..++.+|.. ...++|+|||.||-.+-..|..|...
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHh
Confidence 56778888899999988864 34699999999999999988888764
No 139
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=70.55 E-value=12 Score=33.81 Aligned_cols=87 Identities=20% Similarity=0.159 Sum_probs=56.5
Q ss_pred ccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCC
Q 042842 92 GIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPV 171 (375)
Q Consensus 92 n~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~ 171 (375)
+...|+-|.+.+-=..-..-.+..+..+-++.+..++..+.. .++++.|+|.|-|+.-+-...+++.+....
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~--- 75 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDP--- 75 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCC---
Confidence 344566666443211111112345566677778888887765 478999999999998888888888774221
Q ss_pred CceeecceeeecCCCC
Q 042842 172 SKREKLHGVAIGNGLT 187 (375)
Q Consensus 172 ~~~inLkGi~IGNg~i 187 (375)
..=+|.-|++||+.-
T Consensus 76 -~~~~l~fVl~gnP~r 90 (225)
T PF08237_consen 76 -PPDDLSFVLIGNPRR 90 (225)
T ss_pred -CcCceEEEEecCCCC
Confidence 113588899999853
No 140
>PLN02761 lipase class 3 family protein
Probab=70.37 E-value=11 Score=38.32 Aligned_cols=71 Identities=14% Similarity=0.116 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHHHHHhhCCCC-C--CCCEEEEecCCCcccchHHHHHHHHhccCC--CCCceeecceeeecCCCC
Q 042842 117 QSSVAKHLFAAINGFIDLDPLF-K--NRPIYVTGESYAGKSIPSIGYHILKQNKRV--PVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 117 ~~~~a~~~~~fl~~f~~~~p~~-~--~~~~~i~GESYgG~yvp~~a~~i~~~n~~~--~~~~~inLkGi~IGNg~i 187 (375)
...+.++++..|+...+.+|.. + ...++|+|||.||-.+-..|..|...+-.. .....+++.-+..|.|=+
T Consensus 267 k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRV 342 (527)
T PLN02761 267 SFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRV 342 (527)
T ss_pred chhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCc
Confidence 3457788999999988887532 2 346999999999999999888886542110 011234455555666544
No 141
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=70.29 E-value=22 Score=40.60 Aligned_cols=90 Identities=16% Similarity=0.192 Sum_probs=56.7
Q ss_pred CCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCChHH
Q 042842 40 TPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSS 119 (375)
Q Consensus 40 ~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~ 119 (375)
.|-++.+.|+.|.+..+..+.+. + .....++-+|.| |.|-+ .....+.++
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~-----------------l-------~~~~~v~~~~~~-g~~~~-----~~~~~~l~~ 1117 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRY-----------------L-------DPQWSIYGIQSP-RPDGP-----MQTATSLDE 1117 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHh-----------------c-------CCCCcEEEEECC-CCCCC-----CCCCCCHHH
Confidence 46688889988877665333321 1 112345556654 44422 122356677
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHh
Q 042842 120 VAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 120 ~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
.|+++...++.. .+ ..+++|+|+|+||..+-.+|.++.++
T Consensus 1118 la~~~~~~i~~~---~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~ 1157 (1296)
T PRK10252 1118 VCEAHLATLLEQ---QP---HGPYHLLGYSLGGTLAQGIAARLRAR 1157 (1296)
T ss_pred HHHHHHHHHHhh---CC---CCCEEEEEechhhHHHHHHHHHHHHc
Confidence 777777666542 22 35899999999999999998887654
No 142
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=69.93 E-value=18 Score=30.96 Aligned_cols=75 Identities=15% Similarity=0.164 Sum_probs=45.7
Q ss_pred cccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCC
Q 042842 91 SGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVP 170 (375)
Q Consensus 91 an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~ 170 (375)
..++-+|. .|.|.+. ....+.+..++.....+.. .. ...++.++|+|+||..+-.++.++.++..
T Consensus 26 ~~v~~~~~-~g~~~~~-----~~~~~~~~~~~~~~~~l~~---~~---~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~--- 90 (212)
T smart00824 26 RDVSALPL-PGFGPGE-----PLPASADALVEAQAEAVLR---AA---GGRPFVLVGHSSGGLLAHAVAARLEARGI--- 90 (212)
T ss_pred ccEEEecC-CCCCCCC-----CCCCCHHHHHHHHHHHHHH---hc---CCCCeEEEEECHHHHHHHHHHHHHHhCCC---
Confidence 45677774 4555432 1233444455555444442 22 25689999999999999999988876532
Q ss_pred CCceeecceeeecCC
Q 042842 171 VSKREKLHGVAIGNG 185 (375)
Q Consensus 171 ~~~~inLkGi~IGNg 185 (375)
.++++++.+.
T Consensus 91 -----~~~~l~~~~~ 100 (212)
T smart00824 91 -----PPAAVVLLDT 100 (212)
T ss_pred -----CCcEEEEEcc
Confidence 2556655544
No 143
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=68.35 E-value=18 Score=38.91 Aligned_cols=45 Identities=13% Similarity=-0.015 Sum_probs=31.4
Q ss_pred ChHHHHHHHHHHHHHHHh----------hCCCCCCCCEEEEecCCCcccchHHHHH
Q 042842 116 NQSSVAKHLFAAINGFID----------LDPLFKNRPIYVTGESYAGKSIPSIGYH 161 (375)
Q Consensus 116 ~~~~~a~~~~~fl~~f~~----------~~p~~~~~~~~i~GESYgG~yvp~~a~~ 161 (375)
+..+...|++.... .+. .+..+...++++.|||.||..+..++..
T Consensus 521 n~rQ~v~Dll~L~~-~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 521 NLRQSILDLLGLRL-SLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CHHHHHHHHHHHHH-HHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 56777777765333 333 1223556799999999999999888853
No 144
>PLN00413 triacylglycerol lipase
Probab=67.63 E-value=6.3 Score=39.49 Aligned_cols=40 Identities=13% Similarity=0.238 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHH
Q 042842 122 KHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILK 164 (375)
Q Consensus 122 ~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~ 164 (375)
.++...|++.++.+|. .+++|+|||.||..+-..|..+..
T Consensus 268 y~i~~~Lk~ll~~~p~---~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 268 YTILRHLKEIFDQNPT---SKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHHh
Confidence 3566778888888774 479999999999999988877754
No 145
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=67.21 E-value=8.9 Score=34.32 Aligned_cols=50 Identities=16% Similarity=-0.021 Sum_probs=38.2
Q ss_pred ChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhc
Q 042842 116 NQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQN 166 (375)
Q Consensus 116 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n 166 (375)
+.+..++.+.+.|.+..+..+.- .+++.+.|+|.||.++-.....+.+..
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 34556778888888887765432 578999999999999988877777664
No 146
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=66.63 E-value=9.9 Score=34.53 Aligned_cols=65 Identities=18% Similarity=0.287 Sum_probs=36.8
Q ss_pred ccceecCCCccceeeccCCCCCCCChHHH-HHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHH
Q 042842 92 GIVFLDNPIGTGLSFAVTNDEIPRNQSSV-AKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGY 160 (375)
Q Consensus 92 n~l~iDqP~GtGfS~~~~~~~~~~~~~~~-a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~ 160 (375)
.||-.| =-|.|-|.....+.......+- ..|+-.+| .++++ .....|+|..|+||||+..=-++.
T Consensus 59 ~Vlt~d-yRG~g~S~p~~~~~~~~~~~DwA~~D~~aal-~~~~~--~~~~~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 59 EVLTFD-YRGIGQSRPASLSGSQWRYLDWARLDFPAAL-AALKK--ALPGHPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred eEEEEe-cccccCCCccccccCccchhhhhhcchHHHH-HHHHh--hCCCCceEEeeccccceeeccccc
Confidence 566677 4888888654433333332222 22332222 33322 124679999999999997655543
No 147
>PLN02934 triacylglycerol lipase
Probab=66.50 E-value=8.8 Score=38.83 Aligned_cols=43 Identities=14% Similarity=0.089 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHh
Q 042842 120 VAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 120 ~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
+-..+...|+.+++.+|. .+++|+|||-||-.+-..|..|...
T Consensus 303 Ay~~v~~~lk~ll~~~p~---~kIvVTGHSLGGALAtLaA~~L~l~ 345 (515)
T PLN02934 303 AYYAVRSKLKSLLKEHKN---AKFVVTGHSLGGALAILFPTVLVLQ 345 (515)
T ss_pred HHHHHHHHHHHHHHHCCC---CeEEEeccccHHHHHHHHHHHHHHh
Confidence 344577778888888875 4799999999999998888777544
No 148
>PRK14567 triosephosphate isomerase; Provisional
Probab=66.38 E-value=15 Score=33.92 Aligned_cols=61 Identities=15% Similarity=0.125 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCcc
Q 042842 118 SSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 118 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~ 190 (375)
.+.++++..++++++..+-+-....+-|. |||.--|.-+..|++.. ++.|++||.+-++|.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~---------diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP---------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC---------CCCEEEeehhhhcHH
Confidence 35778889999999876422112334444 99999999999998863 389999999998764
No 149
>PLN02802 triacylglycerol lipase
Probab=66.03 E-value=11 Score=38.14 Aligned_cols=47 Identities=13% Similarity=0.089 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhc
Q 042842 119 SVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQN 166 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n 166 (375)
.+.+++...|+.+++.+|.- ...++|+|||.||-.+-..|..|....
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~ 355 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCV 355 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhC
Confidence 56778888899988887642 347999999999999999988886653
No 150
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=65.28 E-value=6.1 Score=37.97 Aligned_cols=33 Identities=15% Similarity=0.096 Sum_probs=28.4
Q ss_pred CeEEEEEcCCcccCCCCCcHH----HHHHHHHHHcCC
Q 042842 334 NLSNAVVLGAGHLMPADQPLI----SQTMIEDWVLDK 366 (375)
Q Consensus 334 ~ltf~~V~~AGH~vP~dqP~~----~~~mi~~fl~g~ 366 (375)
+.++..+.++||+...++|++ +++.|.+||...
T Consensus 309 ~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 309 DKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred CceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHh
Confidence 468899999999999999987 788888999653
No 151
>PRK14566 triosephosphate isomerase; Provisional
Probab=64.57 E-value=16 Score=33.86 Aligned_cols=60 Identities=22% Similarity=0.280 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCcc
Q 042842 119 SVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~ 190 (375)
+.|+++..++++++...-......+=|. |||.--|.-+..|++.. ++.|++||..-.+|.
T Consensus 189 e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~---------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 189 EQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP---------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC---------CCCeEEechHhcCHH
Confidence 4678899999999864321112334454 99999999999998863 389999999988864
No 152
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=64.55 E-value=9.4 Score=34.81 Aligned_cols=63 Identities=14% Similarity=0.205 Sum_probs=44.4
Q ss_pred cceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHh
Q 042842 93 IVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 93 ~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
++=|+ ..|-|--+. ....++.++.|+.+...|+- -+.++|+-++|+|+||+.+=.+|.++-+.
T Consensus 36 l~avq-lPGR~~r~~---ep~~~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~ 98 (244)
T COG3208 36 LLAVQ-LPGRGDRFG---EPLLTDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERA 98 (244)
T ss_pred eeeec-CCCcccccC---CcccccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHc
Confidence 33344 566663332 23456777777777665542 35688999999999999999999988775
No 153
>PLN02310 triacylglycerol lipase
Probab=63.96 E-value=13 Score=36.55 Aligned_cols=64 Identities=13% Similarity=0.116 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHhhCCC-CCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCC
Q 042842 118 SSVAKHLFAAINGFIDLDPL-FKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 118 ~~~a~~~~~fl~~f~~~~p~-~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~i 187 (375)
..+.+++...++...+.+++ -....+.|+|||.||-.+-..|..|..... .+++.-+..|.|-+
T Consensus 185 ~sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~------~~~v~vyTFGsPRV 249 (405)
T PLN02310 185 LSASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIP------DLFVSVISFGAPRV 249 (405)
T ss_pred chHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCc------CcceeEEEecCCCc
Confidence 34667777778877776653 123579999999999999888877755321 23344555666654
No 154
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=63.42 E-value=9.8 Score=36.59 Aligned_cols=77 Identities=9% Similarity=-0.077 Sum_probs=42.8
Q ss_pred ccceecCCCccceeeccCCCCCCCChHHHHH-HHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCC
Q 042842 92 GIVFLDNPIGTGLSFAVTNDEIPRNQSSVAK-HLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVP 170 (375)
Q Consensus 92 n~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~-~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~ 170 (375)
+++=+|. .|-|.|.. ..+.++.+. ++-.++....+.. ...+++++|+|+||..+-.++...-+
T Consensus 96 ~V~~~D~-~g~g~s~~------~~~~~d~~~~~~~~~v~~l~~~~---~~~~i~lvGhS~GG~i~~~~~~~~~~------ 159 (350)
T TIGR01836 96 DVYLIDW-GYPDRADR------YLTLDDYINGYIDKCVDYICRTS---KLDQISLLGICQGGTFSLCYAALYPD------ 159 (350)
T ss_pred eEEEEeC-CCCCHHHh------cCCHHHHHHHHHHHHHHHHHHHh---CCCcccEEEECHHHHHHHHHHHhCch------
Confidence 5666673 44454421 123333333 3444444444443 34689999999999876655432111
Q ss_pred CCceeecceeeecCCCCCc
Q 042842 171 VSKREKLHGVAIGNGLTDP 189 (375)
Q Consensus 171 ~~~~inLkGi~IGNg~idp 189 (375)
.++++++.++.++.
T Consensus 160 -----~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 160 -----KIKNLVTMVTPVDF 173 (350)
T ss_pred -----heeeEEEecccccc
Confidence 27788777776653
No 155
>PLN02162 triacylglycerol lipase
Probab=62.96 E-value=8.6 Score=38.47 Aligned_cols=41 Identities=10% Similarity=0.019 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHh
Q 042842 122 KHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 122 ~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
..+.+.|+..+.++|. .+++|+|||-||-.+-..|..+...
T Consensus 262 ~~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~~ 302 (475)
T PLN02162 262 YTIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAIH 302 (475)
T ss_pred HHHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHHc
Confidence 3455667777777764 4799999999999988887766543
No 156
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=62.13 E-value=14 Score=33.35 Aligned_cols=38 Identities=24% Similarity=0.225 Sum_probs=28.9
Q ss_pred HHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHh
Q 042842 124 LFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 124 ~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
-.++++.....+++ +++|+|||=||..+-+.|..+.+.
T Consensus 71 A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~ 108 (224)
T PF11187_consen 71 ALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDE 108 (224)
T ss_pred HHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHH
Confidence 34556666665543 599999999999999999886554
No 157
>PF06414 Zeta_toxin: Zeta toxin; InterPro: IPR010488 This entry represents a domain originally identified in bacterial zeta toxin proteins, where it comprises the whole protein []. It has subsequently been found in a number of other proteins, such as polynucleotide kinase and 2',3'-cyclic-nucleotide 3'-phosphodiesterase. It appears to function as a kinase domain [, ].; GO: 0005524 ATP binding, 0016301 kinase activity; PDB: 2P5T_H 1GVN_B 3Q8X_D.
Probab=61.73 E-value=6.9 Score=34.43 Aligned_cols=34 Identities=26% Similarity=0.487 Sum_probs=21.8
Q ss_pred CCCCCEEEEecCCCCh--hHHhHhhhc-c---cCcEEcCC
Q 042842 37 LSQTPLLLWLQGGPGC--SSMLGNFLE-V---GPWRVTHR 70 (375)
Q Consensus 37 p~~~Pl~lwl~GGPG~--Ss~~g~f~e-~---GP~~~~~~ 70 (375)
+...|+++.+-|+||| |++...+.+ . |...|+.|
T Consensus 11 ~~~~P~~~i~aG~~GsGKSt~~~~~~~~~~~~~~v~i~~D 50 (199)
T PF06414_consen 11 PQEKPTLIIIAGQPGSGKSTLARQLLEEFGGGGIVVIDAD 50 (199)
T ss_dssp --SS-EEEEEES-TTSTTHHHHHHHHHHT-TT-SEEE-GG
T ss_pred cccCCEEEEEeCCCCCCHHHHHHHhhhhccCCCeEEEehH
Confidence 5689999999999999 888766665 3 44556655
No 158
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=60.16 E-value=75 Score=29.37 Aligned_cols=61 Identities=16% Similarity=0.185 Sum_probs=43.0
Q ss_pred CCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCC
Q 042842 114 PRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 114 ~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~id 188 (375)
..+.++.++.....|+ +..|+ -|++|.|-|+||..+=.+|.++..+-+. +.-++|.+....
T Consensus 44 ~~~l~~~a~~yv~~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G~~--------Va~L~llD~~~~ 104 (257)
T COG3319 44 FASLDDMAAAYVAAIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQGEE--------VAFLGLLDAVPP 104 (257)
T ss_pred cCCHHHHHHHHHHHHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCCCe--------EEEEEEeccCCC
Confidence 3466667776666555 45664 3999999999999999999999887432 444555555443
No 159
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=59.98 E-value=4.1 Score=34.97 Aligned_cols=26 Identities=31% Similarity=0.397 Sum_probs=22.1
Q ss_pred eCCeEEEEEcCCcccCCCCCcHHHHH
Q 042842 332 FGNLSNAVVLGAGHLMPADQPLISQT 357 (375)
Q Consensus 332 ~~~ltf~~V~~AGH~vP~dqP~~~~~ 357 (375)
.++..++++.++||+++.++|++..+
T Consensus 202 ~~~~~~~~~~~~gH~~~~~~p~~~~~ 227 (228)
T PF12697_consen 202 LPNAELVVIPGAGHFLFLEQPDEVAE 227 (228)
T ss_dssp STTEEEEEETTSSSTHHHHSHHHHHH
T ss_pred CCCCEEEEECCCCCccHHHCHHHHhc
Confidence 35678899999999999999998654
No 160
>PLN02847 triacylglycerol lipase
Probab=59.86 E-value=15 Score=37.87 Aligned_cols=64 Identities=17% Similarity=0.194 Sum_probs=39.4
Q ss_pred hHHHHHHHHH----HHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCC-CCCc
Q 042842 117 QSSVAKHLFA----AINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNG-LTDP 189 (375)
Q Consensus 117 ~~~~a~~~~~----fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg-~idp 189 (375)
...+|..+.. .|++-+..+|.| ++.|+|||.||-.+..++..+. .++. .-+++.+..|.| ++++
T Consensus 226 ml~AArwI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLR-e~~~-----fssi~CyAFgPp~cvS~ 294 (633)
T PLN02847 226 MVAAARWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILR-EQKE-----FSSTTCVTFAPAACMTW 294 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHh-cCCC-----CCCceEEEecCchhcCH
Confidence 3344444444 444555667765 7999999999998888866554 3322 124667777653 4444
No 161
>PRK06489 hypothetical protein; Provisional
Probab=59.82 E-value=9.4 Score=36.89 Aligned_cols=33 Identities=6% Similarity=0.136 Sum_probs=28.5
Q ss_pred eCCeEEEEEcCC----cccCCCCCcHHHHHHHHHHHcC
Q 042842 332 FGNLSNAVVLGA----GHLMPADQPLISQTMIEDWVLD 365 (375)
Q Consensus 332 ~~~ltf~~V~~A----GH~vP~dqP~~~~~mi~~fl~g 365 (375)
..+..+++|.+| ||++. ++|+...+.|.+|+..
T Consensus 320 ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~ 356 (360)
T PRK06489 320 VKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQ 356 (360)
T ss_pred CcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHh
Confidence 456788999996 99985 8999999999999964
No 162
>PLN03037 lipase class 3 family protein; Provisional
Probab=59.25 E-value=16 Score=37.02 Aligned_cols=48 Identities=13% Similarity=0.205 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHhhCCCC-CCCCEEEEecCCCcccchHHHHHHHHhc
Q 042842 119 SVAKHLFAAINGFIDLDPLF-KNRPIYVTGESYAGKSIPSIGYHILKQN 166 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~~p~~-~~~~~~i~GESYgG~yvp~~a~~i~~~n 166 (375)
.+.+++...|+..++.+++. ....++|+|||.||-.+--.|..|....
T Consensus 295 SareQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~ 343 (525)
T PLN03037 295 SASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSV 343 (525)
T ss_pred hhHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhC
Confidence 35567777777777777642 2457999999999999988887776653
No 163
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=59.04 E-value=20 Score=34.44 Aligned_cols=60 Identities=18% Similarity=0.253 Sum_probs=40.1
Q ss_pred cccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCC-CCCCCCEEEEecCCCcccch
Q 042842 89 RISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDP-LFKNRPIYVTGESYAGKSIP 156 (375)
Q Consensus 89 ~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p-~~~~~~~~i~GESYgG~yvp 156 (375)
..+|||..- ..|||+|.+. + +.++...+ ++++.+++..++ .-+.+.+.+.|+|-||--..
T Consensus 170 ~~aNvl~fN-YpGVg~S~G~-----~-s~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa 230 (365)
T PF05677_consen 170 LGANVLVFN-YPGVGSSTGP-----P-SRKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQA 230 (365)
T ss_pred cCCcEEEEC-CCccccCCCC-----C-CHHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccHHHHH
Confidence 357888887 7999999532 2 22334443 466667775543 23568899999999996544
No 164
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=58.53 E-value=5.5 Score=34.77 Aligned_cols=15 Identities=33% Similarity=0.913 Sum_probs=13.3
Q ss_pred CCCCEEEEecCCCCh
Q 042842 38 SQTPLLLWLQGGPGC 52 (375)
Q Consensus 38 ~~~Pl~lwl~GGPG~ 52 (375)
.+.|-|+|+-|||||
T Consensus 5 ~~~~~IifVlGGPGs 19 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGS 19 (195)
T ss_pred ccCCCEEEEEcCCCC
Confidence 468889999999999
No 165
>PHA02857 monoglyceride lipase; Provisional
Probab=57.85 E-value=10 Score=34.75 Aligned_cols=32 Identities=22% Similarity=0.352 Sum_probs=25.6
Q ss_pred CeEEEEEcCCcccCCCCCcH---HHHHHHHHHHcC
Q 042842 334 NLSNAVVLGAGHLMPADQPL---ISQTMIEDWVLD 365 (375)
Q Consensus 334 ~ltf~~V~~AGH~vP~dqP~---~~~~mi~~fl~g 365 (375)
+-++.++.+|||++..++|+ .+.+-+.+||.+
T Consensus 238 ~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~ 272 (276)
T PHA02857 238 NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFN 272 (276)
T ss_pred CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHH
Confidence 45789999999999999985 466666678865
No 166
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=56.19 E-value=15 Score=36.26 Aligned_cols=64 Identities=19% Similarity=0.261 Sum_probs=37.2
Q ss_pred cccceec-------CCCccceeeccCC-CCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchH
Q 042842 91 SGIVFLD-------NPIGTGLSFAVTN-DEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPS 157 (375)
Q Consensus 91 an~l~iD-------qP~GtGfS~~~~~-~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~ 157 (375)
|-|||++ +|.|.- ||.+.. -++- +.+++-.|+.+ |..++++...=+..|+..+|-||||+.+.-
T Consensus 112 AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL-tseQALADfA~-ll~~lK~~~~a~~~pvIafGGSYGGMLaAW 183 (492)
T KOG2183|consen 112 ALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL-TSEQALADFAE-LLTFLKRDLSAEASPVIAFGGSYGGMLAAW 183 (492)
T ss_pred ceEEEeehhccccCCCCcch-hccChhhhccc-cHHHHHHHHHH-HHHHHhhccccccCcEEEecCchhhHHHHH
Confidence 4456665 477766 543211 1222 44555556544 445665544335789999999999965443
No 167
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=55.65 E-value=30 Score=31.85 Aligned_cols=77 Identities=18% Similarity=0.224 Sum_probs=46.7
Q ss_pred cccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCC-CCCCEEEEecCCCcccchHHHHHHHHhccCC
Q 042842 91 SGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLF-KNRPIYVTGESYAGKSIPSIGYHILKQNKRV 169 (375)
Q Consensus 91 an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~-~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~ 169 (375)
.|+.=.| =-|-|.|.++..+ .+..+..+..++.|++ ++ +..++.|+|.|-|..= +-.+..+.
T Consensus 89 ~nv~~~D-YSGyG~S~G~psE---~n~y~Di~avye~Lr~------~~g~~~~Iil~G~SiGt~~----tv~Lasr~--- 151 (258)
T KOG1552|consen 89 CNVVSYD-YSGYGRSSGKPSE---RNLYADIKAVYEWLRN------RYGSPERIILYGQSIGTVP----TVDLASRY--- 151 (258)
T ss_pred ceEEEEe-cccccccCCCccc---ccchhhHHHHHHHHHh------hcCCCceEEEEEecCCchh----hhhHhhcC---
Confidence 3455566 3888999654332 2444444444555543 23 5678999999999743 22222221
Q ss_pred CCCceeecceeeecCCCCCcc
Q 042842 170 PVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 170 ~~~~~inLkGi~IGNg~idp~ 190 (375)
+ +.|+++-+|+++-.
T Consensus 152 ----~--~~alVL~SPf~S~~ 166 (258)
T KOG1552|consen 152 ----P--LAAVVLHSPFTSGM 166 (258)
T ss_pred ----C--cceEEEeccchhhh
Confidence 2 89999999988643
No 168
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=54.89 E-value=11 Score=24.64 Aligned_cols=33 Identities=24% Similarity=0.330 Sum_probs=25.2
Q ss_pred CCCCCccccchhhhHHHhhcCCCCHHHHHHHHH
Q 042842 184 NGLTDPVSQVAVHALNAYFIGLINGRQRVELEK 216 (375)
Q Consensus 184 Ng~idp~~q~~~~~~~~~~~gli~~~~~~~l~~ 216 (375)
.|++||..-..--.+-|+..|+||.+....+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 478888876665567789999999998887754
No 169
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=54.41 E-value=12 Score=35.96 Aligned_cols=31 Identities=23% Similarity=0.265 Sum_probs=27.8
Q ss_pred CeEEEEEcCCcccCCCCCcHHHHHHHHHHHc
Q 042842 334 NLSNAVVLGAGHLMPADQPLISQTMIEDWVL 364 (375)
Q Consensus 334 ~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~ 364 (375)
....+.|.+|||.|=.|+|+.--+.+..+++
T Consensus 332 ~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~ 362 (365)
T KOG4409|consen 332 YVEIIIVPGAGHHVYLDNPEFFNQIVLEECD 362 (365)
T ss_pred cceEEEecCCCceeecCCHHHHHHHHHHHHh
Confidence 4677999999999999999999999888875
No 170
>PLN02429 triosephosphate isomerase
Probab=53.93 E-value=28 Score=33.10 Aligned_cols=60 Identities=13% Similarity=0.206 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHhh-CCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCcc
Q 042842 119 SVAKHLFAAINGFIDL-DPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~ 190 (375)
+.++.+..++++++.. +.+-....+-|. |||---|.-+..|..+. ++.|++||.+.+++.
T Consensus 239 e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~~---------diDG~LVGgASL~~~ 299 (315)
T PLN02429 239 QQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKEE---------DIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcCC---------CCCEEEeecceecHH
Confidence 4678889999999864 322223345555 99999999999998763 489999999998754
No 171
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=53.52 E-value=9.1 Score=28.78 Aligned_cols=36 Identities=19% Similarity=0.353 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHh
Q 042842 122 KHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 122 ~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
-++|++.+.|+-.| |-++.|.+.|+|| .+-+.|.+.
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~------~IlhNIyrl 42 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSN------AILHNIYRL 42 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchH------HHHHHHHHH
Confidence 47899999999876 6688999999999 355666554
No 172
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=53.36 E-value=5.5 Score=37.24 Aligned_cols=36 Identities=17% Similarity=0.179 Sum_probs=29.3
Q ss_pred CeEEEEEcCCcccCCCCCcHHHHHHHHHHHcCCCCC
Q 042842 334 NLSNAVVLGAGHLMPADQPLISQTMIEDWVLDKGLF 369 (375)
Q Consensus 334 ~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~g~~~~ 369 (375)
+-|++.|.++|=||-.+||....+.|+-|++|..+.
T Consensus 247 ~ttllkv~dcGglV~eEqP~klaea~~lFlQG~G~~ 282 (283)
T PF03096_consen 247 KTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMGYL 282 (283)
T ss_dssp CEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTTB-
T ss_pred cceEEEecccCCcccccCcHHHHHHHHHHHccCCcC
Confidence 457799999999999999999999999999997754
No 173
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=53.05 E-value=23 Score=34.10 Aligned_cols=41 Identities=32% Similarity=0.463 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhc
Q 042842 123 HLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQN 166 (375)
Q Consensus 123 ~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n 166 (375)
.+.+-++.-...+| +..++|+|+|-||-++...|..|....
T Consensus 156 ~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~ 196 (336)
T KOG4569|consen 156 GLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNG 196 (336)
T ss_pred HHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcC
Confidence 34444555556666 558999999999999999999998875
No 174
>PLN02561 triosephosphate isomerase
Probab=52.87 E-value=28 Score=32.09 Aligned_cols=59 Identities=12% Similarity=0.195 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHhh-CCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCc
Q 042842 119 SVAKHLFAAINGFIDL-DPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDP 189 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp 189 (375)
+.++++..++++++.. +..-....+-|. |||---|.-+..|... .++.|++||.+-.|+
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~---------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 180 AQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ---------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC---------CCCCeEEEehHhhHH
Confidence 4677888999998853 432223445555 9999999999998775 349999999999886
No 175
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=52.28 E-value=14 Score=37.51 Aligned_cols=33 Identities=9% Similarity=-0.031 Sum_probs=29.3
Q ss_pred eCCeEEEEEcCCcccCCC-CCcHHHHHHHHHHHc
Q 042842 332 FGNLSNAVVLGAGHLMPA-DQPLISQTMIEDWVL 364 (375)
Q Consensus 332 ~~~ltf~~V~~AGH~vP~-dqP~~~~~mi~~fl~ 364 (375)
..+-.+.+|.+|||+.++ ++|+.....|..|..
T Consensus 444 iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~ 477 (481)
T PLN03087 444 VPRARVKVIDDKDHITIVVGRQKEFARELEEIWR 477 (481)
T ss_pred CCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhh
Confidence 456788999999999996 999999999999985
No 176
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=50.55 E-value=1.2e+02 Score=30.83 Aligned_cols=43 Identities=14% Similarity=0.063 Sum_probs=31.5
Q ss_pred ChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHH
Q 042842 116 NQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSI 158 (375)
Q Consensus 116 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~ 158 (375)
+..++-.|+.+|+++-=.+|+.-.+.++..+|-||.|....=+
T Consensus 147 Ss~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~ 189 (514)
T KOG2182|consen 147 SSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWF 189 (514)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHH
Confidence 5567888888888777677764434589999999988655443
No 177
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=48.34 E-value=15 Score=33.97 Aligned_cols=32 Identities=13% Similarity=0.168 Sum_probs=27.5
Q ss_pred CCeEEEEEcCCcccC-CCCCcHHHHHHHHHHHc
Q 042842 333 GNLSNAVVLGAGHLM-PADQPLISQTMIEDWVL 364 (375)
Q Consensus 333 ~~ltf~~V~~AGH~v-P~dqP~~~~~mi~~fl~ 364 (375)
.+.+++++.+|||.+ +.+.++...+.|.+||.
T Consensus 241 ~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 241 PGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred CCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 567889999999999 66666999999999984
No 178
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=47.87 E-value=48 Score=31.65 Aligned_cols=140 Identities=16% Similarity=0.131 Sum_probs=67.6
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHh---HhhhcccCcEEcCCCCCcccccccccCCCcccccccccee
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSML---GNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFL 96 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~---g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~i 96 (375)
+..++=|++.-++ .....|.||.+.|..|.+... ..+...|=..+..+... + ..........
T Consensus 66 g~~V~g~l~~P~~---~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rG-q--g~~~~d~~~~--------- 130 (320)
T PF05448_consen 66 GSRVYGWLYRPKN---AKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRG-Q--GGRSPDYRGS--------- 130 (320)
T ss_dssp GEEEEEEEEEES----SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TT-T--SSSS-B-SSB---------
T ss_pred CCEEEEEEEecCC---CCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCC-C--CCCCCCcccc---------
Confidence 4566666665442 236789999999987764432 23445554444332100 0 0001111100
Q ss_pred cCCCccceeeccCCCCCCCC--hHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCce
Q 042842 97 DNPIGTGLSFAVTNDEIPRN--QSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKR 174 (375)
Q Consensus 97 DqP~GtGfS~~~~~~~~~~~--~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~ 174 (375)
..+..-|+...... +.+.+ -..+..|.++++ .|+...|+.-.+.+.++|.|-||...-.+|. +.++
T Consensus 131 ~~~~~~g~~~~g~~-~~~e~~yyr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~r--------- 198 (320)
T PF05448_consen 131 SGGTLKGHITRGID-DNPEDYYYRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDPR--------- 198 (320)
T ss_dssp SSS-SSSSTTTTTT-S-TTT-HHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSST---------
T ss_pred CCCCCccHHhcCcc-CchHHHHHHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCcc---------
Confidence 11222222211000 00001 112334555544 5677789888889999999999988777765 3221
Q ss_pred eecceeeecCCCCC
Q 042842 175 EKLHGVAIGNGLTD 188 (375)
Q Consensus 175 inLkGi~IGNg~id 188 (375)
++.++...|+..
T Consensus 199 --v~~~~~~vP~l~ 210 (320)
T PF05448_consen 199 --VKAAAADVPFLC 210 (320)
T ss_dssp ---SEEEEESESSS
T ss_pred --ccEEEecCCCcc
Confidence 777877777653
No 179
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=47.81 E-value=48 Score=30.36 Aligned_cols=59 Identities=19% Similarity=0.256 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHhh-CCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCcc
Q 042842 119 SVAKHLFAAINGFIDL-DPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~ 190 (375)
+.++++..++++++.. +.+ ....+-|. |||---|.=+..|++.. ++.|++||.+.+++.
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~---------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP---------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC---------CCCEEEeehHhhCHH
Confidence 3577888999999854 333 33445555 99999999999998863 389999999988753
No 180
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=47.27 E-value=70 Score=32.97 Aligned_cols=84 Identities=10% Similarity=0.082 Sum_probs=49.5
Q ss_pred cccceecCCCccceeeccCCCCCCCChHHHH-HHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCC
Q 042842 91 SGIVFLDNPIGTGLSFAVTNDEIPRNQSSVA-KHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRV 169 (375)
Q Consensus 91 an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a-~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~ 169 (375)
..|+=|| -.|.|.|... .+.++.+ +.+..+|..+.+.. ...+++++|+|.||..+.....++.....
T Consensus 221 f~V~~iD-wrgpg~s~~~------~~~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~~-- 288 (532)
T TIGR01838 221 HTVFVIS-WRNPDASQAD------KTFDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARGD-- 288 (532)
T ss_pred cEEEEEE-CCCCCccccc------CChhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhCC--
Confidence 3566677 4677766321 1222233 34666666665543 35789999999999987664433322210
Q ss_pred CCCceeecceeeecCCCCCcc
Q 042842 170 PVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 170 ~~~~~inLkGi~IGNg~idp~ 190 (375)
.-.++++++.+..+|..
T Consensus 289 ----~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 289 ----DKRIKSATFFTTLLDFS 305 (532)
T ss_pred ----CCccceEEEEecCcCCC
Confidence 11278888777777643
No 181
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=47.14 E-value=29 Score=30.10 Aligned_cols=66 Identities=15% Similarity=0.165 Sum_probs=38.8
Q ss_pred cccccceecCCCc--cceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHH
Q 042842 89 RISGIVFLDNPIG--TGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYH 161 (375)
Q Consensus 89 ~~an~l~iDqP~G--tGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~ 161 (375)
+.|-|.|++.... ...+ .-+ +.--+..|.+|.+|+...=..+ -....+-++|||||..-+-..+..
T Consensus 62 ~vAvV~WlgYdaP~~~~~~-a~~----~~~A~~ga~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPD-AAS----PGYARAGAPRLARFLDGLRATH--GPDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCcccc-ccC----chHHHHHHHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHHHHHhhh
Confidence 7788889865444 2222 100 1112445666777776655555 124579999999998766555543
No 182
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=45.05 E-value=29 Score=37.00 Aligned_cols=43 Identities=14% Similarity=0.128 Sum_probs=30.4
Q ss_pred ChHHHHHHHHHHHHHHHhhC---CCCC---CCCEEEEecCCCcccchHH
Q 042842 116 NQSSVAKHLFAAINGFIDLD---PLFK---NRPIYVTGESYAGKSIPSI 158 (375)
Q Consensus 116 ~~~~~a~~~~~fl~~f~~~~---p~~~---~~~~~i~GESYgG~yvp~~ 158 (375)
+..+.++.+.++++--+..+ +|++ ...+.|.||||||.-+-.+
T Consensus 151 ~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~ 199 (973)
T KOG3724|consen 151 ILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARAT 199 (973)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHH
Confidence 55677888888887666543 4454 4559999999999765443
No 183
>PRK14731 coaE dephospho-CoA kinase; Provisional
Probab=44.35 E-value=26 Score=31.04 Aligned_cols=32 Identities=25% Similarity=0.324 Sum_probs=28.2
Q ss_pred CCCEEEEecCCCCh--hHHhHhhhcccCcEEcCC
Q 042842 39 QTPLLLWLQGGPGC--SSMLGNFLEVGPWRVTHR 70 (375)
Q Consensus 39 ~~Pl~lwl~GGPG~--Ss~~g~f~e~GP~~~~~~ 70 (375)
..|+++=+.||+|| |.+..+|.+.|-..++.|
T Consensus 3 ~~~~~igitG~igsGKSt~~~~l~~~g~~v~d~D 36 (208)
T PRK14731 3 SLPFLVGVTGGIGSGKSTVCRFLAEMGCELFEAD 36 (208)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHCCCeEEecc
Confidence 36789999999999 889999999999888866
No 184
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=44.25 E-value=17 Score=32.36 Aligned_cols=47 Identities=11% Similarity=0.055 Sum_probs=35.2
Q ss_pred HHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCC
Q 042842 128 INGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGL 186 (375)
Q Consensus 128 l~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~ 186 (375)
-.+|+..+|+.....+-|.|-|.||-++-.+|.++- .++.|+..+|-
T Consensus 9 Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~------------~i~avVa~~ps 55 (213)
T PF08840_consen 9 AIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP------------QISAVVAISPS 55 (213)
T ss_dssp HHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS------------SEEEEEEES--
T ss_pred HHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC------------CccEEEEeCCc
Confidence 346888999988899999999999999999998764 16677766653
No 185
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=43.27 E-value=64 Score=29.70 Aligned_cols=59 Identities=15% Similarity=0.231 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHhh-CCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCcc
Q 042842 119 SVAKHLFAAINGFIDL-DPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~ 190 (375)
+.++++..++++++.. +. -....+-|. |||---|.-+..+... .++.|++||.+.+++.
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~---------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 180 EQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ---------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC---------CCCCEEEEeeeeechH
Confidence 4678888999998853 32 123345555 9999999999999775 3489999999988754
No 186
>PRK06762 hypothetical protein; Provisional
Probab=42.19 E-value=20 Score=30.23 Aligned_cols=21 Identities=19% Similarity=0.479 Sum_probs=17.0
Q ss_pred CEEEEecCCCCh--hHHhHhhhc
Q 042842 41 PLLLWLQGGPGC--SSMLGNFLE 61 (375)
Q Consensus 41 Pl~lwl~GGPG~--Ss~~g~f~e 61 (375)
|.++|+.|.||| |.+...+.+
T Consensus 2 ~~li~i~G~~GsGKST~A~~L~~ 24 (166)
T PRK06762 2 TTLIIIRGNSGSGKTTIAKQLQE 24 (166)
T ss_pred CeEEEEECCCCCCHHHHHHHHHH
Confidence 789999999999 777666554
No 187
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=42.04 E-value=28 Score=30.01 Aligned_cols=30 Identities=20% Similarity=0.329 Sum_probs=25.7
Q ss_pred CeEEEEEcCCcccCCCCCcHHHHHHHHHHH
Q 042842 334 NLSNAVVLGAGHLMPADQPLISQTMIEDWV 363 (375)
Q Consensus 334 ~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl 363 (375)
...++++.++||+...++|+...+.+..|+
T Consensus 250 ~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~ 279 (282)
T COG0596 250 DARLVVIPGAGHFPHLEAPEAFAAALLAFL 279 (282)
T ss_pred CceEEEeCCCCCcchhhcHHHHHHHHHHHH
Confidence 378899999999999999998877777654
No 188
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=40.12 E-value=28 Score=32.91 Aligned_cols=32 Identities=16% Similarity=0.193 Sum_probs=25.4
Q ss_pred CeEEEEEcCCcccCCCCCcHH----HHHHHHHHHcC
Q 042842 334 NLSNAVVLGAGHLMPADQPLI----SQTMIEDWVLD 365 (375)
Q Consensus 334 ~ltf~~V~~AGH~vP~dqP~~----~~~mi~~fl~g 365 (375)
+-++..+.++||++..++|+. +..-+.+||..
T Consensus 281 ~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 281 DKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNE 316 (330)
T ss_pred CceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHH
Confidence 467789999999999999964 55666778854
No 189
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=39.39 E-value=25 Score=34.53 Aligned_cols=41 Identities=10% Similarity=0.095 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHH
Q 042842 123 HLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHIL 163 (375)
Q Consensus 123 ~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~ 163 (375)
+.+.-|++.++.--+..++++.|+|||+||.++-.+-....
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhcc
Confidence 33444444443211223789999999999998877766653
No 190
>COG4425 Predicted membrane protein [Function unknown]
Probab=38.83 E-value=44 Score=33.35 Aligned_cols=36 Identities=28% Similarity=0.474 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcc
Q 042842 118 SSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGK 153 (375)
Q Consensus 118 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~ 153 (375)
.++|+.+.+++-.....-|+=+.-++|+.|||-|.+
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 568899999999999999987666799999999864
No 191
>PRK10749 lysophospholipase L2; Provisional
Probab=38.57 E-value=30 Score=32.92 Aligned_cols=32 Identities=19% Similarity=0.163 Sum_probs=25.3
Q ss_pred CeEEEEEcCCcccCCCCCc---HHHHHHHHHHHcC
Q 042842 334 NLSNAVVLGAGHLMPADQP---LISQTMIEDWVLD 365 (375)
Q Consensus 334 ~ltf~~V~~AGH~vP~dqP---~~~~~mi~~fl~g 365 (375)
+.+++.+.||||++..++| +.+++-+..||..
T Consensus 294 ~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 294 GGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred CceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 4578999999999999887 4566667778854
No 192
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=38.47 E-value=47 Score=31.33 Aligned_cols=38 Identities=13% Similarity=0.174 Sum_probs=34.3
Q ss_pred CeEEEEEcCCcccCCCCCcHHHHHHHHHHHcCCCCCCC
Q 042842 334 NLSNAVVLGAGHLMPADQPLISQTMIEDWVLDKGLFAN 371 (375)
Q Consensus 334 ~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~g~~~~~~ 371 (375)
+-|++.|-++|-++..+||....+-|+-|++|..+.+.
T Consensus 274 ~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy~~s 311 (326)
T KOG2931|consen 274 YTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGYLPS 311 (326)
T ss_pred cceEEEEcccCCcccccCchHHHHHHHHHHccCCcccc
Confidence 46779999999999999999999999999999887764
No 193
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=38.03 E-value=2.4e+02 Score=26.53 Aligned_cols=49 Identities=18% Similarity=0.159 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCC
Q 042842 123 HLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGL 186 (375)
Q Consensus 123 ~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~ 186 (375)
+-..|+..+++.- +++ ..+.+.|+|-|+--+-.+|... .+.|+++.|+.
T Consensus 88 er~~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~-------------~~~g~~lin~~ 136 (297)
T PF06342_consen 88 ERQNFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH-------------PLHGLVLINPP 136 (297)
T ss_pred HHHHHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC-------------ccceEEEecCC
Confidence 3446777777654 343 5677889999998777776533 26799999975
No 194
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=36.90 E-value=21 Score=22.34 Aligned_cols=12 Identities=42% Similarity=1.055 Sum_probs=6.5
Q ss_pred CCEEEEecCCCC
Q 042842 40 TPLLLWLQGGPG 51 (375)
Q Consensus 40 ~Pl~lwl~GGPG 51 (375)
.--+||++|-||
T Consensus 24 ~gRTiWFqGdPG 35 (39)
T PF09292_consen 24 NGRTIWFQGDPG 35 (39)
T ss_dssp TS-EEEESS---
T ss_pred CCCEEEeeCCCC
Confidence 345799999887
No 195
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=36.31 E-value=87 Score=30.33 Aligned_cols=107 Identities=21% Similarity=0.262 Sum_probs=66.9
Q ss_pred CCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCCccceeeccCCCCCCCC
Q 042842 37 LSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRN 116 (375)
Q Consensus 37 p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~ 116 (375)
+.-.-|||.+.|--| |.|+|=..- +..+..---.||. .|-+-|. .-.++.+
T Consensus 240 ~ngq~LvIC~EGNAG-------FYEvG~m~t---------P~~lgYsvLGwNh----------PGFagST---G~P~p~n 290 (517)
T KOG1553|consen 240 GNGQDLVICFEGNAG-------FYEVGVMNT---------PAQLGYSVLGWNH----------PGFAGST---GLPYPVN 290 (517)
T ss_pred CCCceEEEEecCCcc-------ceEeeeecC---------hHHhCceeeccCC----------CCccccC---CCCCccc
Confidence 455778888887644 566663210 1123333334654 4444443 2356778
Q ss_pred hHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCC
Q 042842 117 QSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 117 ~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~id 188 (375)
+..+++.+..|-.+=+ .|+..++.|.|-|-||.-+...|+ ..-++|+|++-.-+-|
T Consensus 291 ~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs------------~YPdVkavvLDAtFDD 346 (517)
T KOG1553|consen 291 TLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAAS------------NYPDVKAVVLDATFDD 346 (517)
T ss_pred chHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhh------------cCCCceEEEeecchhh
Confidence 8777776665544433 466789999999999988877764 2345899888766544
No 196
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=35.81 E-value=1e+02 Score=28.95 Aligned_cols=66 Identities=20% Similarity=0.203 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHhhCCC--C-CCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceee--cceeeecCCCCCcc
Q 042842 119 SVAKHLFAAINGFIDLDPL--F-KNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREK--LHGVAIGNGLTDPV 190 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~~p~--~-~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~in--LkGi~IGNg~idp~ 190 (375)
..|..+++.++.-.+..+. + .+.++.|+|.|=||+=. ..|..+... -.+.++ |+|.+.|.+..|..
T Consensus 46 ~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~~-----YApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 46 SEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAPS-----YAPELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred hHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhHH-----hCcccccceeEEeccCCccCHH
Confidence 3455555555555443332 2 36789999999998654 334444322 135788 99999999877643
No 197
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=35.22 E-value=64 Score=29.86 Aligned_cols=41 Identities=12% Similarity=0.131 Sum_probs=27.5
Q ss_pred CCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCC
Q 042842 141 RPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLT 187 (375)
Q Consensus 141 ~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~i 187 (375)
..+.|+|||=||+-+-.++....+ ....+++++++..+|+-
T Consensus 91 s~l~l~GHSrGGk~Af~~al~~~~------~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 91 SKLALAGHSRGGKVAFAMALGNAS------SSLDLRFSALILLDPVD 131 (259)
T ss_pred cceEEeeeCCCCHHHHHHHhhhcc------cccccceeEEEEecccc
Confidence 359999999999955444433311 12346788888887764
No 198
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=35.18 E-value=1.1e+02 Score=31.18 Aligned_cols=34 Identities=12% Similarity=0.046 Sum_probs=24.3
Q ss_pred HHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHH
Q 042842 125 FAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIG 159 (375)
Q Consensus 125 ~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a 159 (375)
++++++....|-. -.+++-|+|+|.||..|-.+.
T Consensus 180 L~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 180 LRWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHh
Confidence 4666677666642 246799999999998875543
No 199
>PLN02511 hydrolase
Probab=34.72 E-value=30 Score=33.93 Aligned_cols=34 Identities=18% Similarity=0.146 Sum_probs=26.9
Q ss_pred EeCCeEEEEEcCCcccCCCCCcHH------HHHHHHHHHc
Q 042842 331 KFGNLSNAVVLGAGHLMPADQPLI------SQTMIEDWVL 364 (375)
Q Consensus 331 ~~~~ltf~~V~~AGH~vP~dqP~~------~~~mi~~fl~ 364 (375)
...+..++++.++||+..+++|+. +...+.+|+.
T Consensus 324 ~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~ 363 (388)
T PLN02511 324 ANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLE 363 (388)
T ss_pred cCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHH
Confidence 356889999999999999999965 3566666664
No 200
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=34.46 E-value=1.9e+02 Score=21.23 Aligned_cols=78 Identities=14% Similarity=0.138 Sum_probs=47.0
Q ss_pred ceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhcccCcEEcCCCCCcccccccccCCCccccccccceecCCC
Q 042842 21 SAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLEVGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFLDNPI 100 (375)
Q Consensus 21 ~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~iDqP~ 100 (375)
.+||+..+...+ + .+.+|+.+.|--..|.-+ .+... .+..+- ..|+=+| -.
T Consensus 2 ~~L~~~~w~p~~----~-~k~~v~i~HG~~eh~~ry---~~~a~--------------~L~~~G------~~V~~~D-~r 52 (79)
T PF12146_consen 2 TKLFYRRWKPEN----P-PKAVVVIVHGFGEHSGRY---AHLAE--------------FLAEQG------YAVFAYD-HR 52 (79)
T ss_pred cEEEEEEecCCC----C-CCEEEEEeCCcHHHHHHH---HHHHH--------------HHHhCC------CEEEEEC-CC
Confidence 467777776432 2 588999999863334433 33322 222222 3577788 59
Q ss_pred ccceeeccCCCCCCCChHHHHHHHHHHHH
Q 042842 101 GTGLSFAVTNDEIPRNQSSVAKHLFAAIN 129 (375)
Q Consensus 101 GtGfS~~~~~~~~~~~~~~~a~~~~~fl~ 129 (375)
|.|.|-.. .....+.++..+|+..|++
T Consensus 53 GhG~S~g~--rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 53 GHGRSEGK--RGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred cCCCCCCc--ccccCCHHHHHHHHHHHhC
Confidence 99999642 2345677777777776653
No 201
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=34.23 E-value=1.3e+02 Score=30.38 Aligned_cols=77 Identities=19% Similarity=0.213 Sum_probs=52.7
Q ss_pred HHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCccccchhhhHH---Hhh
Q 042842 126 AAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPVSQVAVHALN---AYF 202 (375)
Q Consensus 126 ~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~~q~~~~~~~---~~~ 202 (375)
..++.||.+-|++ -|..|.|=||+=+-..|.+--+. +.||+.|.|-++...+.....-. ...
T Consensus 104 ~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQryP~d-----------fDGIlAgaPA~~~~~~~~~~~~~~~~~~~ 168 (474)
T PF07519_consen 104 ALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRYPED-----------FDGILAGAPAINWTHLQLAHAWPAQVMYP 168 (474)
T ss_pred HHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhChhh-----------cCeEEeCCchHHHHHHHHHhhhhhhhhcc
Confidence 3466788876654 79999999999999888777654 89999999998764432221111 111
Q ss_pred --cCCCCHHHHHHHHHH
Q 042842 203 --IGLINGRQRVELEKA 217 (375)
Q Consensus 203 --~gli~~~~~~~l~~~ 217 (375)
...++..+.+.+.+.
T Consensus 169 ~~~~~~~~~~~~~i~~a 185 (474)
T PF07519_consen 169 DPGGYLSPCKLDLIHAA 185 (474)
T ss_pred CCCCCCCHHHHHHHHHH
Confidence 246677777766554
No 202
>PRK01184 hypothetical protein; Provisional
Probab=34.13 E-value=31 Score=29.63 Aligned_cols=28 Identities=21% Similarity=0.159 Sum_probs=19.7
Q ss_pred EEEEecCCCCh--hHHhHhhhcccCcEEcC
Q 042842 42 LLLWLQGGPGC--SSMLGNFLEVGPWRVTH 69 (375)
Q Consensus 42 l~lwl~GGPG~--Ss~~g~f~e~GP~~~~~ 69 (375)
.+|+|.|+||| |.+.-++.+.|=..+..
T Consensus 2 ~~i~l~G~~GsGKsT~a~~~~~~g~~~i~~ 31 (184)
T PRK01184 2 KIIGVVGMPGSGKGEFSKIAREMGIPVVVM 31 (184)
T ss_pred cEEEEECCCCCCHHHHHHHHHHcCCcEEEh
Confidence 58999999999 55555566776444543
No 203
>PTZ00333 triosephosphate isomerase; Provisional
Probab=33.15 E-value=80 Score=29.14 Aligned_cols=60 Identities=17% Similarity=0.222 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHhh-CCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCc
Q 042842 118 SSVAKHLFAAINGFIDL-DPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDP 189 (375)
Q Consensus 118 ~~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp 189 (375)
.+.++++..++++++.. +.......+-|. |||---|.-+..|.... ++.|++||.+.+++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~~---------~vDG~LvG~asl~~ 242 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQP---------DIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcCC---------CCCEEEEehHhhhh
Confidence 35778889999998853 322223345555 99999999999997753 48999999998863
No 204
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=32.74 E-value=1.7e+02 Score=26.56 Aligned_cols=130 Identities=17% Similarity=0.070 Sum_probs=80.3
Q ss_pred cceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCC-EEEEecCCCcccchHHHHHHHHhccCCCC
Q 042842 93 IVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRP-IYVTGESYAGKSIPSIGYHILKQNKRVPV 171 (375)
Q Consensus 93 ~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~-~~i~GESYgG~yvp~~a~~i~~~n~~~~~ 171 (375)
.+-+| -.|-|-|.. +-+..+-...|+|+...+|-|-.. ++- =.|.|+|=||--+-..+.++.+ .
T Consensus 65 ~fRfD-F~GnGeS~g---sf~~Gn~~~eadDL~sV~q~~s~~-----nr~v~vi~gHSkGg~Vvl~ya~K~~d------~ 129 (269)
T KOG4667|consen 65 AFRFD-FSGNGESEG---SFYYGNYNTEADDLHSVIQYFSNS-----NRVVPVILGHSKGGDVVLLYASKYHD------I 129 (269)
T ss_pred EEEEE-ecCCCCcCC---ccccCcccchHHHHHHHHHHhccC-----ceEEEEEEeecCccHHHHHHHHhhcC------c
Confidence 34566 577777742 234445555678988877766442 222 3466999999988888888766 1
Q ss_pred CceeecceeeecCCCCCccccchhhhHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCChhhhhhhccCCCCCCC----ch
Q 042842 172 SKREKLHGVAIGNGLTDPVSQVAVHALNAYFIGLINGRQRVELEKAQRKAIRLVKMGSWSDATNARHDRKDPYA----TS 247 (375)
Q Consensus 172 ~~~inLkGi~IGNg~idp~~q~~~~~~~~~~~gli~~~~~~~l~~~~~~~~~~i~~~~~~~a~~~~~~~~~~y~----~~ 247 (375)
+..||+.|=..+-+.|....+ +.|.++.-.-|.||-.. ++..|+ ..
T Consensus 130 ~~viNcsGRydl~~~I~eRlg-~~~l~~ike~Gfid~~~-----------------------------rkG~y~~rvt~e 179 (269)
T KOG4667|consen 130 RNVINCSGRYDLKNGINERLG-EDYLERIKEQGFIDVGP-----------------------------RKGKYGYRVTEE 179 (269)
T ss_pred hheEEcccccchhcchhhhhc-ccHHHHHHhCCceecCc-----------------------------ccCCcCceecHH
Confidence 246788777766666654333 45555555556555431 111121 24
Q ss_pred HHHhhcCcHHHHHHhCCCCC
Q 042842 248 LVTSLLRMDEVKKAFGAKDT 267 (375)
Q Consensus 248 ~~~~yLN~~~Vk~aL~V~~~ 267 (375)
.+...||..-+++-+.|+..
T Consensus 180 SlmdrLntd~h~aclkId~~ 199 (269)
T KOG4667|consen 180 SLMDRLNTDIHEACLKIDKQ 199 (269)
T ss_pred HHHHHHhchhhhhhcCcCcc
Confidence 45667888888888888754
No 205
>PRK00081 coaE dephospho-CoA kinase; Reviewed
Probab=32.49 E-value=45 Score=29.12 Aligned_cols=30 Identities=30% Similarity=0.435 Sum_probs=24.9
Q ss_pred CEEEEecCCCCh--hHHhHhhhcccCcEEcCC
Q 042842 41 PLLLWLQGGPGC--SSMLGNFLEVGPWRVTHR 70 (375)
Q Consensus 41 Pl~lwl~GGPG~--Ss~~g~f~e~GP~~~~~~ 70 (375)
+.++-|.||+|| |.....|.+.|-..++.|
T Consensus 2 ~~~i~ltG~~gsGKst~~~~l~~~g~~~i~~D 33 (194)
T PRK00081 2 MLIIGLTGGIGSGKSTVANLFAELGAPVIDAD 33 (194)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHcCCEEEEec
Confidence 467899998887 889999999887777766
No 206
>PRK15492 triosephosphate isomerase; Provisional
Probab=32.06 E-value=1.1e+02 Score=28.47 Aligned_cols=60 Identities=22% Similarity=0.173 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHh-hCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCccc
Q 042842 119 SVAKHLFAAINGFID-LDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPVS 191 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~-~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~~ 191 (375)
+.+++...++++++. .+.+- ...+-|. |||---|.-+..|+... ++.|++||..-.+|..
T Consensus 189 e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~~---------diDG~LvG~aSl~~~~ 249 (260)
T PRK15492 189 DYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQP---------HIDGLFIGRSAWDADK 249 (260)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcCC---------CCCEEEeehhhcCHHH
Confidence 355778899999874 34322 3355666 99999999999998863 4999999999888653
No 207
>PRK10949 protease 4; Provisional
Probab=31.15 E-value=37 Score=35.65 Aligned_cols=70 Identities=24% Similarity=0.361 Sum_probs=46.8
Q ss_pred cccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCC--cccchHHHHHHHHhccC
Q 042842 91 SGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYA--GKSIPSIGYHILKQNKR 168 (375)
Q Consensus 91 an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYg--G~yvp~~a~~i~~~n~~ 168 (375)
+=+|.||.|.|.|.. ..+.+.++|+.|=. +++|++..|++|+ |.|+...|.+|.-+..
T Consensus 115 givL~i~s~gG~~~a--------------~~~eI~~ai~~fk~-----sGKpVvA~~~~~~s~~YyLASaAD~I~l~P~- 174 (618)
T PRK10949 115 GIVLDLKNFAGADQP--------------SMQYIGKALREFRD-----SGKPVYAVGDSYSQGQYYLASFANKIYLSPQ- 174 (618)
T ss_pred EEEEEeCCCCCccHH--------------HHHHHHHHHHHHHH-----hCCeEEEEecCccchhhhhhhhCCEEEECCC-
Confidence 346788877766543 23567777877743 3679999999997 8888888888766522
Q ss_pred CCCCceeecceeeecC
Q 042842 169 VPVSKREKLHGVAIGN 184 (375)
Q Consensus 169 ~~~~~~inLkGi~IGN 184 (375)
-.+.+.|+...+
T Consensus 175 ----G~v~~~G~~~~~ 186 (618)
T PRK10949 175 ----GVVDLHGFATNG 186 (618)
T ss_pred ----ceEEEeeeecch
Confidence 235555555543
No 208
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=31.11 E-value=48 Score=28.45 Aligned_cols=39 Identities=13% Similarity=0.133 Sum_probs=27.4
Q ss_pred CCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCC
Q 042842 140 NRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTD 188 (375)
Q Consensus 140 ~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~id 188 (375)
+.+.+|+|||.|+.-+-..+. .+ ...+++|+++..|+-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~---~~-------~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA---EQ-------SQKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH---HT-------CCSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh---hc-------ccccccEEEEEcCCCc
Confidence 668999999999976665554 22 1345999999999843
No 209
>PRK14733 coaE dephospho-CoA kinase; Provisional
Probab=31.06 E-value=48 Score=29.48 Aligned_cols=32 Identities=16% Similarity=0.072 Sum_probs=25.4
Q ss_pred CCCEEEEecCCCCh--hHHhHhhhc-ccCcEEcCC
Q 042842 39 QTPLLLWLQGGPGC--SSMLGNFLE-VGPWRVTHR 70 (375)
Q Consensus 39 ~~Pl~lwl~GGPG~--Ss~~g~f~e-~GP~~~~~~ 70 (375)
-.|.+|=|.||+|| |.....|.| .|--.++.|
T Consensus 4 ~~~~~IglTG~iGsGKStv~~~l~~~lg~~vidaD 38 (204)
T PRK14733 4 INTYPIGITGGIASGKSTATRILKEKLNLNVVCAD 38 (204)
T ss_pred CceEEEEEECCCCCCHHHHHHHHHHHcCCeEEecc
Confidence 36899999999999 888888876 676566655
No 210
>COG3150 Predicted esterase [General function prediction only]
Probab=30.96 E-value=91 Score=27.00 Aligned_cols=63 Identities=16% Similarity=0.258 Sum_probs=43.9
Q ss_pred CCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCcccc
Q 042842 113 IPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPVSQ 192 (375)
Q Consensus 113 ~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~~q 192 (375)
.+....++++.+-..+++ +.++..-|+|-|-||.|+--|+.+. -|+. +|.||-+-|...
T Consensus 38 l~h~p~~a~~ele~~i~~-------~~~~~p~ivGssLGGY~At~l~~~~-------------Gira-v~~NPav~P~e~ 96 (191)
T COG3150 38 LPHDPQQALKELEKAVQE-------LGDESPLIVGSSLGGYYATWLGFLC-------------GIRA-VVFNPAVRPYEL 96 (191)
T ss_pred CCCCHHHHHHHHHHHHHH-------cCCCCceEEeecchHHHHHHHHHHh-------------CChh-hhcCCCcCchhh
Confidence 466777777777766653 5566688999999999988887544 1333 356788777766
Q ss_pred chhh
Q 042842 193 VAVH 196 (375)
Q Consensus 193 ~~~~ 196 (375)
+..|
T Consensus 97 l~gy 100 (191)
T COG3150 97 LTGY 100 (191)
T ss_pred hhhh
Confidence 5544
No 211
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=30.89 E-value=86 Score=33.09 Aligned_cols=61 Identities=15% Similarity=0.177 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHhh-CCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCcc
Q 042842 118 SSVAKHLFAAINGFIDL-DPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 118 ~~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~ 190 (375)
.+.+++++.++++++.. +-.-....+-|. |||.--|.-+..|.... ++.|++||..-.++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~---------diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQP---------DIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcCC---------CCCeEEeehHhcCHH
Confidence 35778899999999853 321112234444 99999999999998863 489999999988764
No 212
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=30.82 E-value=62 Score=28.00 Aligned_cols=80 Identities=15% Similarity=0.210 Sum_probs=48.9
Q ss_pred ecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCcee
Q 042842 96 LDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKRE 175 (375)
Q Consensus 96 iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~i 175 (375)
|+-|+..+.. .+..+..+.+.++...|+.+....| +.++.|.|-|=|+.-+-.+... ..++....=
T Consensus 45 V~YpA~~~~~------~y~~S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~-----~~l~~~~~~ 110 (179)
T PF01083_consen 45 VEYPASLGPN------SYGDSVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSG-----DGLPPDVAD 110 (179)
T ss_dssp --S---SCGG------SCHHHHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHH-----TTSSHHHHH
T ss_pred cCCCCCCCcc------cccccHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHh-----ccCChhhhh
Confidence 5556666652 1234555677888899999999988 4689999999999877766655 111111122
Q ss_pred eccee-eecCCCCCc
Q 042842 176 KLHGV-AIGNGLTDP 189 (375)
Q Consensus 176 nLkGi-~IGNg~idp 189 (375)
++.++ ++|||.-.+
T Consensus 111 ~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 111 RIAAVVLFGDPRRGA 125 (179)
T ss_dssp HEEEEEEES-TTTBT
T ss_pred hEEEEEEecCCcccC
Confidence 36664 689987643
No 213
>PRK05855 short chain dehydrogenase; Validated
Probab=30.77 E-value=40 Score=34.44 Aligned_cols=33 Identities=21% Similarity=0.407 Sum_probs=27.3
Q ss_pred eCCeEEEEEcCCcccCCCCCcHHHHHHHHHHHcC
Q 042842 332 FGNLSNAVVLGAGHLMPADQPLISQTMIEDWVLD 365 (375)
Q Consensus 332 ~~~ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~g 365 (375)
..+..+.++ ++||+++.+.|+...+.|..|+..
T Consensus 259 ~~~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 259 VPRLWRREI-KAGHWLPMSHPQVLAAAVAEFVDA 291 (582)
T ss_pred CCcceEEEc-cCCCcchhhChhHHHHHHHHHHHh
Confidence 345666665 589999999999999999999964
No 214
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=30.62 E-value=57 Score=28.05 Aligned_cols=29 Identities=14% Similarity=0.316 Sum_probs=24.1
Q ss_pred CCCCCCEEEEecCCCcccchHHHHHHHHh
Q 042842 137 LFKNRPIYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 137 ~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
.+..-|+.|-|.||||....+++..+...
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A~ 113 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQAP 113 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcCC
Confidence 45667999999999999999999877543
No 215
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=30.52 E-value=41 Score=33.11 Aligned_cols=30 Identities=17% Similarity=0.073 Sum_probs=26.0
Q ss_pred EEEEEcCCcccCCCC-CcHHHHHHHHHHHcC
Q 042842 336 SNAVVLGAGHLMPAD-QPLISQTMIEDWVLD 365 (375)
Q Consensus 336 tf~~V~~AGH~vP~d-qP~~~~~mi~~fl~g 365 (375)
++..+.+++|++..+ .|+.+++.+..||.+
T Consensus 356 ~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~ 386 (395)
T PLN02652 356 DIKLYDGFLHDLLFEPEREEVGRDIIDWMEK 386 (395)
T ss_pred eEEEECCCeEEeccCCCHHHHHHHHHHHHHH
Confidence 456789999999777 899999999999974
No 216
>TIGR01618 phage_P_loop phage nucleotide-binding protein. This model represents an uncharacterized family of proteins from a number of phage of Gram-positive bacteria. This protein contains a P-loop motif, G/A-X-X-G-X-G-K-T near its amino end. The function of this protein is unknown.
Probab=29.68 E-value=75 Score=28.61 Aligned_cols=34 Identities=15% Similarity=0.269 Sum_probs=24.8
Q ss_pred CCCCEEEEecCCCCh--hHHhHhhhcccCcEEcCCCC
Q 042842 38 SQTPLLLWLQGGPGC--SSMLGNFLEVGPWRVTHRPN 72 (375)
Q Consensus 38 ~~~Pl~lwl~GGPG~--Ss~~g~f~e~GP~~~~~~~~ 72 (375)
...|..+++-|-||+ |++...| ...|+.++.+.+
T Consensus 9 ~~~~~~~liyG~~G~GKtt~a~~~-~~~~~~~~~d~~ 44 (220)
T TIGR01618 9 KRIPNMYLIYGKPGTGKTSTIKYL-PGKTLVLSFDMS 44 (220)
T ss_pred CCCCcEEEEECCCCCCHHHHHHhc-CCCCEEEecccc
Confidence 456888999999998 6666555 455888887753
No 217
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=29.45 E-value=20 Score=23.15 Aligned_cols=16 Identities=25% Similarity=0.443 Sum_probs=13.1
Q ss_pred HHhhcCcHHHHHHhCC
Q 042842 249 VTSLLRMDEVKKAFGA 264 (375)
Q Consensus 249 ~~~yLN~~~Vk~aL~V 264 (375)
+-.-|++||||++|++
T Consensus 16 l~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 16 LLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHcCHHHHHHHHH
Confidence 3456899999999986
No 218
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=29.35 E-value=26 Score=34.31 Aligned_cols=38 Identities=13% Similarity=0.189 Sum_probs=21.7
Q ss_pred CEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCccc
Q 042842 142 PIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPVS 191 (375)
Q Consensus 142 ~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~~ 191 (375)
.+.++||||||--+-..+. +. . .+|..++.+||.-|..
T Consensus 229 ~i~~~GHSFGGATa~~~l~---~d-~--------r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALR---QD-T--------RFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHHHHHHHH---H--T--------T--EEEEES---TTS-
T ss_pred heeeeecCchHHHHHHHHh---hc-c--------CcceEEEeCCcccCCC
Confidence 5899999999955443322 22 1 2788889999988764
No 219
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=28.54 E-value=48 Score=33.23 Aligned_cols=44 Identities=9% Similarity=0.080 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHhhC-CCCCCCCEEEEecCCCcccchHHHHHH
Q 042842 119 SVAKHLFAAINGFIDLD-PLFKNRPIYVTGESYAGKSIPSIGYHI 162 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~~-p~~~~~~~~i~GESYgG~yvp~~a~~i 162 (375)
+..++.+.-|+..++.. ....++++.|++||+||.|+-++-...
T Consensus 159 e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 159 EERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 44555666677777543 333348999999999999987765543
No 220
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=28.46 E-value=21 Score=32.16 Aligned_cols=37 Identities=19% Similarity=0.189 Sum_probs=27.6
Q ss_pred EEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCcc
Q 042842 143 IYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 143 ~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~ 190 (375)
..|+|.|+||.-+-.++.+--+. +.+++.-.|.+++.
T Consensus 117 ~~i~G~S~GG~~Al~~~l~~Pd~-----------F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLALRHPDL-----------FGAVIAFSGALDPS 153 (251)
T ss_dssp EEEEEETHHHHHHHHHHHHSTTT-----------ESEEEEESEESETT
T ss_pred eEEeccCCCcHHHHHHHHhCccc-----------cccccccCcccccc
Confidence 89999999998777766543222 77888888877665
No 221
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=28.34 E-value=67 Score=28.43 Aligned_cols=64 Identities=11% Similarity=0.041 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCccc
Q 042842 121 AKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPVS 191 (375)
Q Consensus 121 a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~~ 191 (375)
.++.++.|.++++....| -=|.|-|=|+..+..++....+.... ....++|-+++-+|+.-+..
T Consensus 86 ~~~sl~~l~~~i~~~GPf----dGvlGFSQGA~lAa~ll~~~~~~~~~---~~~~~~kf~V~~sg~~p~~~ 149 (212)
T PF03959_consen 86 LDESLDYLRDYIEENGPF----DGVLGFSQGAALAALLLALQQRGRPD---GAHPPFKFAVFISGFPPPDP 149 (212)
T ss_dssp -HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST-----T----SEEEEES----EEE
T ss_pred HHHHHHHHHHHHHhcCCe----EEEEeecHHHHHHHHHHHHHHhhccc---ccCCCceEEEEEcccCCCch
Confidence 344556666666653322 34889999999998888777665321 12355788887788765433
No 222
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=28.05 E-value=47 Score=31.71 Aligned_cols=68 Identities=16% Similarity=0.222 Sum_probs=39.3
Q ss_pred ccccceecCCCccc-eeeccC---------C-CCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHH
Q 042842 90 ISGIVFLDNPIGTG-LSFAVT---------N-DEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSI 158 (375)
Q Consensus 90 ~an~l~iDqP~GtG-fS~~~~---------~-~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~ 158 (375)
..-|+|-||=|||| |--+.. . .-......+-....|.||-..|+ -+..+|++|-|=|..-+-.+
T Consensus 65 ~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYrFL~~~ye-----pGD~Iy~FGFSRGAf~aRVl 139 (423)
T COG3673 65 VTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYRFLIFNYE-----PGDEIYAFGFSRGAFSARVL 139 (423)
T ss_pred ceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcC-----CCCeEEEeeccchhHHHHHH
Confidence 34489999999988 221110 0 00111222333444666655443 26689999999988766666
Q ss_pred HHHH
Q 042842 159 GYHI 162 (375)
Q Consensus 159 a~~i 162 (375)
|..|
T Consensus 140 agmi 143 (423)
T COG3673 140 AGMI 143 (423)
T ss_pred HHHH
Confidence 6544
No 223
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=28.02 E-value=45 Score=29.44 Aligned_cols=59 Identities=12% Similarity=0.054 Sum_probs=35.1
Q ss_pred CCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHH
Q 042842 99 PIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILK 164 (375)
Q Consensus 99 P~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~ 164 (375)
=-|||-|.+.=+.+ ..+.+-|....+.++ .+||+- ..+.|.|-|+|+..+-.+|.+.-+
T Consensus 68 fRgVG~S~G~fD~G--iGE~~Da~aaldW~~---~~hp~s--~~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 68 FRGVGRSQGEFDNG--IGELEDAAAALDWLQ---ARHPDS--ASCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred ccccccccCcccCC--cchHHHHHHHHHHHH---hhCCCc--hhhhhcccchHHHHHHHHHHhccc
Confidence 58999886543222 233333333333333 467753 236999999999776666665533
No 224
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=27.85 E-value=22 Score=33.28 Aligned_cols=23 Identities=26% Similarity=0.600 Sum_probs=17.3
Q ss_pred CCCCCCEEEEecCCCcccchHHH
Q 042842 137 LFKNRPIYVTGESYAGKSIPSIG 159 (375)
Q Consensus 137 ~~~~~~~~i~GESYgG~yvp~~a 159 (375)
.|-...++++|+|-||..+..+.
T Consensus 272 ~Ypda~iwlTGHSLGGa~AsLlG 294 (425)
T COG5153 272 IYPDARIWLTGHSLGGAIASLLG 294 (425)
T ss_pred hCCCceEEEeccccchHHHHHhc
Confidence 34467899999999997655544
No 225
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=27.85 E-value=22 Score=33.28 Aligned_cols=23 Identities=26% Similarity=0.600 Sum_probs=17.3
Q ss_pred CCCCCCEEEEecCCCcccchHHH
Q 042842 137 LFKNRPIYVTGESYAGKSIPSIG 159 (375)
Q Consensus 137 ~~~~~~~~i~GESYgG~yvp~~a 159 (375)
.|-...++++|+|-||..+..+.
T Consensus 272 ~Ypda~iwlTGHSLGGa~AsLlG 294 (425)
T KOG4540|consen 272 IYPDARIWLTGHSLGGAIASLLG 294 (425)
T ss_pred hCCCceEEEeccccchHHHHHhc
Confidence 34467899999999997655544
No 226
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=27.64 E-value=1.1e+02 Score=29.39 Aligned_cols=54 Identities=17% Similarity=0.209 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCC
Q 042842 122 KHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGL 186 (375)
Q Consensus 122 ~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~ 186 (375)
+|+..+|..-...+| .+++|.+|-|.||. .+|.++.++-.. . ....++++-+|+
T Consensus 132 ~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~d----~-~~~aa~~vs~P~ 185 (345)
T COG0429 132 EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGDD----L-PLDAAVAVSAPF 185 (345)
T ss_pred hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhccC----c-ccceeeeeeCHH
Confidence 455454443334455 68999999999994 356666665332 1 225566666665
No 227
>cd02022 DPCK Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA, which is the final step in CoA biosynthesis.
Probab=27.53 E-value=49 Score=28.39 Aligned_cols=28 Identities=25% Similarity=0.325 Sum_probs=21.7
Q ss_pred EEEecCCCCh--hHHhHhhhcccCcEEcCC
Q 042842 43 LLWLQGGPGC--SSMLGNFLEVGPWRVTHR 70 (375)
Q Consensus 43 ~lwl~GGPG~--Ss~~g~f~e~GP~~~~~~ 70 (375)
+|-+.||||| |.....|.+.|=..++.|
T Consensus 1 ii~itG~~gsGKst~~~~l~~~g~~~i~~D 30 (179)
T cd02022 1 IIGLTGGIGSGKSTVAKLLKELGIPVIDAD 30 (179)
T ss_pred CEEEECCCCCCHHHHHHHHHHCCCCEEecC
Confidence 4779999988 888888888775556655
No 228
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=27.28 E-value=1.7e+02 Score=29.67 Aligned_cols=114 Identities=18% Similarity=0.316 Sum_probs=67.1
Q ss_pred CceEEEEEEEecCCCCCCCCCCEEEEecCCCChhHHhHhhhc---ccCcEEcCCCCCcccccccccCCCcccccccccee
Q 042842 20 GSAIFYAFYEAQTPTSPLSQTPLLLWLQGGPGCSSMLGNFLE---VGPWRVTHRPNTTQQQLALEPNLGSWNRISGIVFL 96 (375)
Q Consensus 20 ~~~lfy~~~~a~~~~~~p~~~Pl~lwl~GGPG~Ss~~g~f~e---~GP~~~~~~~~~~~~~~~~~~n~~sW~~~an~l~i 96 (375)
+..++|+|.+-. -+-||.+++.|==.+-..-|.+++ ..|+. ||=
T Consensus 275 reEi~yYFnPGD------~KPPL~VYFSGyR~aEGFEgy~MMk~Lg~PfL---------------------------L~~ 321 (511)
T TIGR03712 275 RQEFIYYFNPGD------FKPPLNVYFSGYRPAEGFEGYFMMKRLGAPFL---------------------------LIG 321 (511)
T ss_pred CCeeEEecCCcC------CCCCeEEeeccCcccCcchhHHHHHhcCCCeE---------------------------Eee
Confidence 345666666542 357999999995445444454443 34554 444
Q ss_pred cCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceee
Q 042842 97 DNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREK 176 (375)
Q Consensus 97 DqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~in 176 (375)
|+=+--| ++.-.++ +.=+.+.+.+++-++.- .|+.+++.|.|-|+|..=+-+.++ ++|
T Consensus 322 DpRleGG-aFYlGs~-------eyE~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga-------------~l~ 379 (511)
T TIGR03712 322 DPRLEGG-AFYLGSD-------EYEQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGA-------------KLS 379 (511)
T ss_pred ccccccc-eeeeCcH-------HHHHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhcc-------------cCC
Confidence 4223233 3321111 12234556666666543 578899999999998765555554 345
Q ss_pred cceeeecCCCCC
Q 042842 177 LHGVAIGNGLTD 188 (375)
Q Consensus 177 LkGi~IGNg~id 188 (375)
=.+|+||-|+++
T Consensus 380 P~AIiVgKPL~N 391 (511)
T TIGR03712 380 PHAIIVGKPLVN 391 (511)
T ss_pred CceEEEcCcccc
Confidence 667777777765
No 229
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=26.95 E-value=83 Score=28.15 Aligned_cols=60 Identities=27% Similarity=0.243 Sum_probs=40.1
Q ss_pred cccceecCCCccceeeccCCCCCCC----ChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHH
Q 042842 91 SGIVFLDNPIGTGLSFAVTNDEIPR----NQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHI 162 (375)
Q Consensus 91 an~l~iDqP~GtGfS~~~~~~~~~~----~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i 162 (375)
..++=+| |.|-|-|..... .... .+.+.|-|+.++| +-.+|-|.|-|=||.-+--.|.+-
T Consensus 72 ~TivawD-PpGYG~SrPP~R-kf~~~ff~~Da~~avdLM~aL----------k~~~fsvlGWSdGgiTalivAak~ 135 (277)
T KOG2984|consen 72 VTIVAWD-PPGYGTSRPPER-KFEVQFFMKDAEYAVDLMEAL----------KLEPFSVLGWSDGGITALIVAAKG 135 (277)
T ss_pred eEEEEEC-CCCCCCCCCCcc-cchHHHHHHhHHHHHHHHHHh----------CCCCeeEeeecCCCeEEEEeeccC
Confidence 5688899 899999974322 2221 2445555666555 346899999999998876666543
No 230
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=26.83 E-value=23 Score=32.52 Aligned_cols=60 Identities=18% Similarity=0.215 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHhh-CCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCcc
Q 042842 119 SVAKHLFAAINGFIDL-DPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~ 190 (375)
+.++.+..++++++.. +.+-..+.+-|. |||.--|.-+..|.... ++.|++||.+-+++.
T Consensus 178 ~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~~---------~iDG~LVG~asl~~~ 238 (244)
T PF00121_consen 178 EQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLSQP---------DIDGVLVGGASLKAE 238 (244)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHTST---------T-SEEEESGGGGSTH
T ss_pred HHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhcCC---------CCCEEEEchhhhccc
Confidence 5678889999998743 211112334444 99999999888887752 499999999988865
No 231
>TIGR00152 dephospho-CoA kinase. This model produces scores in the range of 0-25 bits against adenylate, guanylate, uridine, and thymidylate kinases.
Probab=26.79 E-value=45 Score=28.81 Aligned_cols=25 Identities=24% Similarity=0.385 Sum_probs=19.9
Q ss_pred EEEecCCCCh--hHHhHhhhcccCcEE
Q 042842 43 LLWLQGGPGC--SSMLGNFLEVGPWRV 67 (375)
Q Consensus 43 ~lwl~GGPG~--Ss~~g~f~e~GP~~~ 67 (375)
+|-+.||||| |.....|.+.|.+.+
T Consensus 1 ~i~itG~~gsGKst~~~~l~~~~~~~~ 27 (188)
T TIGR00152 1 IIGLTGGIGSGKSTVANYLADKYHFPV 27 (188)
T ss_pred CEEEECCCCCCHHHHHHHHHHhcCCeE
Confidence 3678998877 888899999886653
No 232
>KOG1643 consensus Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=26.67 E-value=1.1e+02 Score=27.18 Aligned_cols=60 Identities=15% Similarity=0.233 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHhhC-CCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCcc
Q 042842 119 SVAKHLFAAINGFIDLD-PLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPV 190 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~~-p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~ 190 (375)
+.|++++..|+.|+... .......+-|. |||----.-+..|.+. -.+.|.++|..-+-|.
T Consensus 178 ~QaqEVh~~iR~wl~~~vs~~Va~~~RIi---YGGSV~g~N~~el~~~---------~diDGFLVGGaSLKpe 238 (247)
T KOG1643|consen 178 EQAQEVHAEIRKWLKSNVSDAVASSTRII---YGGSVNGGNCKELAKK---------PDIDGFLVGGASLKPE 238 (247)
T ss_pred HHHHHHHHHHHHHHhhcchhhhhhceEEE---eccccccccHHHhccc---------ccccceEEcCcccChH
Confidence 57899999999999652 12222233333 5665544555555554 2388999999877654
No 233
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=25.99 E-value=66 Score=28.14 Aligned_cols=19 Identities=16% Similarity=0.186 Sum_probs=14.1
Q ss_pred eeeecCCCCCccccchhhh
Q 042842 179 GVAIGNGLTDPVSQVAVHA 197 (375)
Q Consensus 179 Gi~IGNg~idp~~q~~~~~ 197 (375)
|+++...+|+|....+.+.
T Consensus 95 G~iviva~ISP~r~~R~~a 113 (197)
T COG0529 95 GLIVIVAFISPYREDRQMA 113 (197)
T ss_pred CeEEEEEeeCccHHHHHHH
Confidence 7888888999887655444
No 234
>PRK14734 coaE dephospho-CoA kinase; Provisional
Probab=25.97 E-value=69 Score=28.17 Aligned_cols=29 Identities=28% Similarity=0.269 Sum_probs=23.9
Q ss_pred EEEEecCCCCh--hHHhHhhhcccCcEEcCC
Q 042842 42 LLLWLQGGPGC--SSMLGNFLEVGPWRVTHR 70 (375)
Q Consensus 42 l~lwl~GGPG~--Ss~~g~f~e~GP~~~~~~ 70 (375)
.++.+.||+|| |+..-.|.+.|=..++.|
T Consensus 2 ~~igitG~igsGKst~~~~l~~~g~~vid~D 32 (200)
T PRK14734 2 LRIGLTGGIGSGKSTVADLLSSEGFLIVDAD 32 (200)
T ss_pred eEEEEECCCCCCHHHHHHHHHHCCCeEEeCc
Confidence 47999999999 888888888887777766
No 235
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=25.79 E-value=72 Score=29.39 Aligned_cols=29 Identities=7% Similarity=-0.053 Sum_probs=24.7
Q ss_pred eEEEEEcCCcccCCCCCcHHHHHHHHHHHc
Q 042842 335 LSNAVVLGAGHLMPADQPLISQTMIEDWVL 364 (375)
Q Consensus 335 ltf~~V~~AGH~vP~dqP~~~~~mi~~fl~ 364 (375)
-..++| ++||+.++.+|+...++|.+...
T Consensus 240 ~~~~~l-~~gH~p~ls~P~~~~~~i~~~a~ 268 (273)
T PLN02211 240 SQVYEL-ESDHSPFFSTPFLLFGLLIKAAA 268 (273)
T ss_pred cEEEEE-CCCCCccccCHHHHHHHHHHHHH
Confidence 366777 59999999999999999998764
No 236
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=25.71 E-value=38 Score=29.24 Aligned_cols=29 Identities=21% Similarity=0.247 Sum_probs=25.4
Q ss_pred eCCeEEEEEcCCcccCCCCCcHHHHHHHH
Q 042842 332 FGNLSNAVVLGAGHLMPADQPLISQTMIE 360 (375)
Q Consensus 332 ~~~ltf~~V~~AGH~vP~dqP~~~~~mi~ 360 (375)
..+..++++.++||....+.|+..-++|.
T Consensus 201 ~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 201 IPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp STTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 45678899999999999999999988875
No 237
>PRK14565 triosephosphate isomerase; Provisional
Probab=25.44 E-value=1.3e+02 Score=27.41 Aligned_cols=53 Identities=21% Similarity=0.239 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCccc
Q 042842 119 SVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPVS 191 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~~ 191 (375)
+.++.+..+++++. ..+-|. |||.--|.-+..+.+.. ++.|++||.+.+++..
T Consensus 174 e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~~---------~iDG~LvG~asl~~~~ 226 (237)
T PRK14565 174 DAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSIN---------QLSGVLVGSASLDVDS 226 (237)
T ss_pred HHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcCC---------CCCEEEEechhhcHHH
Confidence 46778888888763 233344 99999999999998842 3899999999987653
No 238
>COG0149 TpiA Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=25.24 E-value=2.1e+02 Score=26.39 Aligned_cols=69 Identities=20% Similarity=0.261 Sum_probs=51.1
Q ss_pred CCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhh-CCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeec
Q 042842 99 PIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDL-DPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKL 177 (375)
Q Consensus 99 P~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inL 177 (375)
.+|||-|-+ .+.++.+..|++..... +.+- ..+-|. |||--=|.=+..+..+ .++
T Consensus 170 AIGTG~~at----------~~~a~~v~~~Ir~~~~~~~~~~--~~v~Il---YGGSV~~~N~~e~~~~---------~~i 225 (251)
T COG0149 170 AIGTGKSAS----------PADAEEVHAFIRAVLAELFGAE--EKVRIL---YGGSVKPGNAAELAAQ---------PDI 225 (251)
T ss_pred HhcCCCCCC----------HHHHHHHHHHHHHHHHHhcCCC--CCeEEE---EeCCcChhHHHHHhcC---------CCC
Confidence 589997721 13567888999998854 4332 456666 9999999988888776 349
Q ss_pred ceeeecCCCCCccc
Q 042842 178 HGVAIGNGLTDPVS 191 (375)
Q Consensus 178 kGi~IGNg~idp~~ 191 (375)
.|++||.+.+++..
T Consensus 226 dG~LVGgAslka~~ 239 (251)
T COG0149 226 DGALVGGASLKADD 239 (251)
T ss_pred CeEEEcceeecchh
Confidence 99999999987654
No 239
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=25.02 E-value=41 Score=28.53 Aligned_cols=13 Identities=31% Similarity=0.836 Sum_probs=10.8
Q ss_pred CCEEEEecCCCCh
Q 042842 40 TPLLLWLQGGPGC 52 (375)
Q Consensus 40 ~Pl~lwl~GGPG~ 52 (375)
+|.+|||+|=||+
T Consensus 1 ~g~vIwltGlsGs 13 (156)
T PF01583_consen 1 KGFVIWLTGLSGS 13 (156)
T ss_dssp S-EEEEEESSTTS
T ss_pred CCEEEEEECCCCC
Confidence 5899999998887
No 240
>PRK15453 phosphoribulokinase; Provisional
Probab=25.02 E-value=55 Score=30.77 Aligned_cols=19 Identities=11% Similarity=0.288 Sum_probs=15.1
Q ss_pred CCCEEEEecCCCCh--hHHhH
Q 042842 39 QTPLLLWLQGGPGC--SSMLG 57 (375)
Q Consensus 39 ~~Pl~lwl~GGPG~--Ss~~g 57 (375)
.++.+|++.||||| |.+.-
T Consensus 3 ~k~piI~ItG~SGsGKTTva~ 23 (290)
T PRK15453 3 AKHPIIAVTGSSGAGTTTVKR 23 (290)
T ss_pred CCCcEEEEECCCCCCHHHHHH
Confidence 47889999999999 55443
No 241
>COG3896 Chloramphenicol 3-O-phosphotransferase [Defense mechanisms]
Probab=24.85 E-value=54 Score=28.10 Aligned_cols=28 Identities=32% Similarity=0.621 Sum_probs=21.6
Q ss_pred CCCEEEEecCCC--ChhHHhHhhhcc--cCcE
Q 042842 39 QTPLLLWLQGGP--GCSSMLGNFLEV--GPWR 66 (375)
Q Consensus 39 ~~Pl~lwl~GGP--G~Ss~~g~f~e~--GP~~ 66 (375)
..--|+-||||| |=||+.-.|+|+ ||+.
T Consensus 21 ~~griVlLNG~~saGKSSiA~A~Q~~~a~pwm 52 (205)
T COG3896 21 PEGRIVLLNGGSSAGKSSIALAFQDLAAEPWM 52 (205)
T ss_pred CCceEEEecCCCccchhHHHHHHHHHhhcchh
Confidence 345588899999 559999999984 6764
No 242
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=24.72 E-value=49 Score=34.53 Aligned_cols=41 Identities=22% Similarity=0.404 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCEEEEecCC--CcccchHHHHHHHHh
Q 042842 120 VAKHLFAAINGFIDLDPLFKNRPIYVTGESY--AGKSIPSIGYHILKQ 165 (375)
Q Consensus 120 ~a~~~~~fl~~f~~~~p~~~~~~~~i~GESY--gG~yvp~~a~~i~~~ 165 (375)
..+.+.++|+.|=+ +++|++..|++| ||.|+...|.+|.-+
T Consensus 111 ~~~ei~~ai~~fk~-----sgKpVvA~~~~~~s~~YylAs~AD~I~~~ 153 (584)
T TIGR00705 111 HLVEIGSALSEFKD-----SGKPVYAYGTNYSQGQYYLASFADEIILN 153 (584)
T ss_pred HHHHHHHHHHHHHh-----cCCeEEEEEccccchhhhhhhhCCEEEEC
Confidence 34567788887732 378999999998 588888888888765
No 243
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.10 E-value=1.9e+02 Score=28.18 Aligned_cols=49 Identities=14% Similarity=0.085 Sum_probs=36.5
Q ss_pred CCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCccc
Q 042842 140 NRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDPVS 191 (375)
Q Consensus 140 ~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp~~ 191 (375)
-..+||..||+|.-.+-....+|.-++.+ .....++-|++-.+-+|-..
T Consensus 190 ~~~I~ilAHSMGtwl~~e~LrQLai~~~~---~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 190 VKRIYLLAHSMGTWLLMEALRQLAIRADR---PLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred CceEEEEEecchHHHHHHHHHHHhccCCc---chhhhhhheEeeCCCCChhh
Confidence 46799999999998887777777666543 13445788888888887543
No 244
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=24.06 E-value=79 Score=27.47 Aligned_cols=36 Identities=14% Similarity=0.257 Sum_probs=26.9
Q ss_pred CCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCC
Q 042842 140 NRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGL 186 (375)
Q Consensus 140 ~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~ 186 (375)
.+|.||+++|-|+--+...+.++.. .++|+++..|.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~-----------~V~GalLVApp 93 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQR-----------QVAGALLVAPP 93 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhh-----------ccceEEEecCC
Confidence 6789999999998766666655544 28888877664
No 245
>COG0237 CoaE Dephospho-CoA kinase [Coenzyme metabolism]
Probab=23.85 E-value=83 Score=27.87 Aligned_cols=30 Identities=27% Similarity=0.320 Sum_probs=25.7
Q ss_pred CEEEEecCCCCh--hHHhHhhhcccCcEEcCC
Q 042842 41 PLLLWLQGGPGC--SSMLGNFLEVGPWRVTHR 70 (375)
Q Consensus 41 Pl~lwl~GGPG~--Ss~~g~f~e~GP~~~~~~ 70 (375)
.++|=|+||||| |...-+|.|.|=..++.|
T Consensus 2 ~~iIglTG~igsGKStva~~~~~~G~~vidaD 33 (201)
T COG0237 2 MLIIGLTGGIGSGKSTVAKILAELGFPVIDAD 33 (201)
T ss_pred ceEEEEecCCCCCHHHHHHHHHHcCCeEEEcc
Confidence 578899999999 888899999777778766
No 246
>COG4569 MhpF Acetaldehyde dehydrogenase (acetylating) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=23.52 E-value=65 Score=28.63 Aligned_cols=62 Identities=16% Similarity=0.142 Sum_probs=39.8
Q ss_pred cCCCccccccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCccc
Q 042842 82 PNLGSWNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKS 154 (375)
Q Consensus 82 ~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~y 154 (375)
.+...|....-|+=|| |-.-|......- +.+++-+. + .|+-..|++++-++.+-.-|-|-|.
T Consensus 24 lr~g~~le~~~mvgid-p~sdglaraarl-gv~tt~eg--------v-~~ll~~p~~~di~lvfdatsa~~h~ 85 (310)
T COG4569 24 LRHGQHLEMAVMVGID-PQSDGLARAARL-GVATTHEG--------V-IGLLNMPEFADIDLVFDATSAGAHV 85 (310)
T ss_pred HhcCCcccceeEEccC-CCccHHHHHHhc-CCcchhhH--------H-HHHHhCCCCCCcceEEeccccchhh
Confidence 3455688888899999 777776654322 23333222 1 3455678988878887777877664
No 247
>COG0221 Ppa Inorganic pyrophosphatase [Energy production and conversion]
Probab=23.25 E-value=1.8e+02 Score=25.09 Aligned_cols=67 Identities=16% Similarity=0.223 Sum_probs=48.5
Q ss_pred ccccCCCccccccccceecCCCccceeeccCCCCC---------------------------------------------
Q 042842 79 ALEPNLGSWNRISGIVFLDNPIGTGLSFAVTNDEI--------------------------------------------- 113 (375)
Q Consensus 79 ~~~~n~~sW~~~an~l~iDqP~GtGfS~~~~~~~~--------------------------------------------- 113 (375)
.-+.+.|-+.+.+..+.+|++..+++.|..+-+.+
T Consensus 23 ~~s~~KyE~dk~~~~~~vdR~l~~~~~YP~NYGfiP~Tl~~DGDPlDvlVi~~~p~~pG~vi~~r~iG~l~m~D~~e~D~ 102 (171)
T COG0221 23 KGSNIKYEVDKETGRLLVDRPLKTPMGYPVNYGFIPNTLSDDGDPLDVLVIGEEPLAPGCVIQARPIGVLKMIDEGEKDD 102 (171)
T ss_pred CCCccceEEeeecCceeeeecCCCCCcCCccccccCCcccCCCCceEEEEEcCcCCCceeEEEEEEEEEEEEeeCCCcce
Confidence 44458888999999999999999998886431100
Q ss_pred --------------CCChHHHHHHHHHHHHHHHhhCCCCCCCCEEE
Q 042842 114 --------------PRNQSSVAKHLFAAINGFIDLDPLFKNRPIYV 145 (375)
Q Consensus 114 --------------~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i 145 (375)
..+..++.+.+.+-++.||+.|+.++...+..
T Consensus 103 Kviav~~~dp~~~~i~di~d~~~~~~~~i~~ffe~yK~le~~k~~~ 148 (171)
T COG0221 103 KVIAVPKLDPRYEHIKDISDLPEHLLDEIQHFFETYKDLEKGKWVK 148 (171)
T ss_pred EEEEecCCCcchhhccchhHHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 11336778888999999999998886643433
No 248
>cd00412 pyrophosphatase Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules of orthophosphates (Pi). The reaction requires bivalent cations. The enzymes in general exist as homooligomers.
Probab=22.95 E-value=2.8e+02 Score=23.54 Aligned_cols=45 Identities=22% Similarity=0.240 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHh
Q 042842 117 QSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 117 ~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
..+....+.+-++.||+.+..+.+.+..-+ +|..-+.-|.+++++
T Consensus 108 l~Dl~~~~l~~I~~fF~~YK~le~~k~~~~----~g~~~~~~A~~~I~~ 152 (155)
T cd00412 108 ISDVPPHLLDEIKHFFEHYKDLEGKKEVKV----AGWKDKEEALKIIKE 152 (155)
T ss_pred hHHCCHHHHHHHHHHHHHhcccCCCCceEE----CcCcCHHHHHHHHHH
Confidence 355667888999999999988876443222 377777778777764
No 249
>PF10609 ParA: ParA/MinD ATPase like; InterPro: IPR019591 This entry represents ATPases involved in plasmid partitioning []. It also contains cytosolic Fe-S cluster assembling factors, NBP35 and CFD1 which are required for biogenesis and export of both ribosomal subunits probably through assembling the ISCs in RLI1, a protein which performs rRNA processing and ribosome export [, , ].; PDB: 2PH1_A 3KB1_B.
Probab=22.92 E-value=36 Score=25.45 Aligned_cols=12 Identities=42% Similarity=0.761 Sum_probs=8.5
Q ss_pred ccceecCCCccc
Q 042842 92 GIVFLDNPIGTG 103 (375)
Q Consensus 92 n~l~iDqP~GtG 103 (375)
+.|.||-|.|||
T Consensus 2 D~LiiD~PPGTg 13 (81)
T PF10609_consen 2 DYLIIDLPPGTG 13 (81)
T ss_dssp CEEEEE--SCSS
T ss_pred CEEEEeCCCCCC
Confidence 468899999998
No 250
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=22.77 E-value=86 Score=21.74 Aligned_cols=20 Identities=25% Similarity=0.600 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHhhCCCCC
Q 042842 120 VAKHLFAAINGFIDLDPLFK 139 (375)
Q Consensus 120 ~a~~~~~fl~~f~~~~p~~~ 139 (375)
.-+++++.++.|++.||..-
T Consensus 6 iPe~L~~~m~~fie~hP~WD 25 (57)
T PF10929_consen 6 IPEDLHQAMKDFIETHPNWD 25 (57)
T ss_pred ccHHHHHHHHHHHHcCCCch
Confidence 45789999999999999873
No 251
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=22.14 E-value=1.4e+02 Score=29.64 Aligned_cols=48 Identities=15% Similarity=0.236 Sum_probs=37.8
Q ss_pred CChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHh
Q 042842 115 RNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQ 165 (375)
Q Consensus 115 ~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~ 165 (375)
++.++.|.|+-+ |..||.. +.+.+++.|.|-|+|.-..|.+-.++-..
T Consensus 303 rtPe~~a~Dl~r-~i~~y~~--~w~~~~~~liGySfGADvlP~~~n~L~~~ 350 (456)
T COG3946 303 RTPEQIAADLSR-LIRFYAR--RWGAKRVLLIGYSFGADVLPFAYNRLPPA 350 (456)
T ss_pred CCHHHHHHHHHH-HHHHHHH--hhCcceEEEEeecccchhhHHHHHhCCHH
Confidence 467889999876 4456654 46788999999999999999988777543
No 252
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=22.00 E-value=1.1e+02 Score=29.11 Aligned_cols=32 Identities=13% Similarity=0.208 Sum_probs=26.8
Q ss_pred CeEEEEEcCCcccCCCCC-cHHHHHHHHHHHcC
Q 042842 334 NLSNAVVLGAGHLMPADQ-PLISQTMIEDWVLD 365 (375)
Q Consensus 334 ~ltf~~V~~AGH~vP~dq-P~~~~~mi~~fl~g 365 (375)
+-++..+.+++|++..+. ++.+++-+..||.+
T Consensus 300 ~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 300 NKELHTLEDMDHVITIEPGNEEVLKKIIEWISN 332 (332)
T ss_pred CcEEEEECCCCCCCccCCCHHHHHHHHHHHhhC
Confidence 467788999999999885 68888989999853
No 253
>PF12532 DUF3732: Protein of unknown function (DUF3732); InterPro: IPR022205 This domain family is found in bacteria and eukaryotes, and is typically between 180 and 198 amino acids in length. There is a conserved DQP sequence motif.
Probab=21.96 E-value=1.1e+02 Score=26.94 Aligned_cols=57 Identities=18% Similarity=0.297 Sum_probs=35.0
Q ss_pred ccceecCCCccceeeccCC------CCC--CCChHHHHHHHHHHHHHHHhhC-CCCCCCCEEEEecCC
Q 042842 92 GIVFLDNPIGTGLSFAVTN------DEI--PRNQSSVAKHLFAAINGFIDLD-PLFKNRPIYVTGESY 150 (375)
Q Consensus 92 n~l~iDqP~GtGfS~~~~~------~~~--~~~~~~~a~~~~~fl~~f~~~~-p~~~~~~~~i~GESY 150 (375)
+.|+||||..+=|.- .+. ..+ ..++..+...++.+|-.|...- ++. .-.+.|+=|.+
T Consensus 102 ~fL~lDQPSQvYfp~-~~~~~~~~~~~~~~~d~D~~aV~~~F~~L~~~~~~~~~~~-~~QiIV~eHAd 167 (193)
T PF12532_consen 102 SFLFLDQPSQVYFPS-RDKSEDFDEEELRERDEDIAAVRKMFSLLADFIKEIEKEY-GFQIIVLEHAD 167 (193)
T ss_pred CeeeecCCCcCcCCC-cccccccchhhccccchHHHHHHHHHHHHHHHHHHhcccc-CccEEEEeccc
Confidence 799999999998875 111 111 2355566777888888888643 222 23455554433
No 254
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=21.67 E-value=85 Score=29.47 Aligned_cols=51 Identities=27% Similarity=0.467 Sum_probs=36.0
Q ss_pred cccccccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCccc
Q 042842 87 WNRISGIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKS 154 (375)
Q Consensus 87 W~~~an~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~y 154 (375)
.++.+-||-+|-|+|+|-|. .|+++.+-|- |..||++.--.+|+ .|||+-.
T Consensus 67 f~enSkvI~VeGnI~sGK~k-------------lAKelAe~Lg--f~hfP~~~~d~iyv--dsyg~D~ 117 (393)
T KOG3877|consen 67 FHENSKVIVVEGNIGSGKTK-------------LAKELAEQLG--FVHFPEFRMDDIYV--DSYGNDL 117 (393)
T ss_pred hcccceEEEEeCCcccCchh-------------HHHHHHHHhC--Ccccccccccceee--cccCccc
Confidence 55667799999999999773 4455444332 46799987666776 7888754
No 255
>PF05729 NACHT: NACHT domain
Probab=21.58 E-value=64 Score=26.45 Aligned_cols=17 Identities=41% Similarity=1.085 Sum_probs=12.8
Q ss_pred EEEecCCCCh--hHHhHhh
Q 042842 43 LLWLQGGPGC--SSMLGNF 59 (375)
Q Consensus 43 ~lwl~GGPG~--Ss~~g~f 59 (375)
++|+.|.||+ |.+...+
T Consensus 2 ~l~I~G~~G~GKStll~~~ 20 (166)
T PF05729_consen 2 VLWISGEPGSGKSTLLRKL 20 (166)
T ss_pred EEEEECCCCCChHHHHHHH
Confidence 6899999998 6665433
No 256
>TIGR00419 tim triosephosphate isomerase. Triosephosphate isomerase (tim/TPIA) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The active site of the enzyme is located between residues 240-258 of the model ([AV]-Y-E-P-[LIVM]-W-[SA]-I-G-T-[GK]) with E being the active site residue. There is a slight deviation from this sequence within the archeal members of this family.
Probab=20.87 E-value=1.9e+02 Score=25.79 Aligned_cols=54 Identities=11% Similarity=0.121 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCCCEEEEecCCCcccchHHHHHHHHhccCCCCCceeecceeeecCCCCCc
Q 042842 119 SVAKHLFAAINGFIDLDPLFKNRPIYVTGESYAGKSIPSIGYHILKQNKRVPVSKREKLHGVAIGNGLTDP 189 (375)
Q Consensus 119 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GESYgG~yvp~~a~~i~~~n~~~~~~~~inLkGi~IGNg~idp 189 (375)
+.++++..+++ +- .+. ...+-|. |||---|.-+..+..+. ++.|++||.+.+++
T Consensus 151 ~~~~~v~~~ir-~~---~~~-~~~~~Il---YGGSV~~~N~~~l~~~~---------~iDG~LvG~Asl~a 204 (205)
T TIGR00419 151 AQPEVVHGSVR-AV---KEV-NESVRVL---CGAGISTGEDAELAAQL---------GAEGVLLASGSLKA 204 (205)
T ss_pred HHHHHHHHHHH-hh---hhh-cCCceEE---EeCCCCHHHHHHHhcCC---------CCCEEEEeeeeecC
Confidence 35667777777 21 122 2234444 99999999999998763 48999999988765
No 257
>PRK05541 adenylylsulfate kinase; Provisional
Probab=20.28 E-value=86 Score=26.57 Aligned_cols=23 Identities=13% Similarity=0.541 Sum_probs=17.8
Q ss_pred CCCCCEEEEecCCCCh--hHHhHhh
Q 042842 37 LSQTPLLLWLQGGPGC--SSMLGNF 59 (375)
Q Consensus 37 p~~~Pl~lwl~GGPG~--Ss~~g~f 59 (375)
+...|.+||+.|-||| |++.-.+
T Consensus 3 ~~~~~~~I~i~G~~GsGKst~a~~l 27 (176)
T PRK05541 3 MKPNGYVIWITGLAGSGKTTIAKAL 27 (176)
T ss_pred CCCCCCEEEEEcCCCCCHHHHHHHH
Confidence 3468999999999999 7765443
No 258
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=20.19 E-value=89 Score=27.28 Aligned_cols=39 Identities=8% Similarity=0.251 Sum_probs=19.3
Q ss_pred ccceecCCCccceeeccCCCCCCCChHHHHHHHHHHHHHHHh
Q 042842 92 GIVFLDNPIGTGLSFAVTNDEIPRNQSSVAKHLFAAINGFID 133 (375)
Q Consensus 92 n~l~iDqP~GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~ 133 (375)
++|++|+|=++|..+... ...++....++..+++..++.
T Consensus 2 dliitDPPY~~~~~~~~~---~~~~~~~~~~~y~~~~~~~~~ 40 (231)
T PF01555_consen 2 DLIITDPPYNIGKDYNNY---FDYGDNKNHEEYLEWMEEWLK 40 (231)
T ss_dssp EEEEE---TSSSCS--------CSCHCCHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcchh---hhccCCCCHHHHHHHHHHHHH
Confidence 689999999999985211 122222334455556665553
Done!