Your job contains 1 sequence.
>042844
MRLLKSVVHNHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVP
GLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVN
VCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFG
WGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQK
LVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREK
QDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN
VPLVVEGLEGES
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042844
(372 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2156233 - symbol:RUG2 "RCC1/UVR8/GEF-like 2" s... 1092 1.4e-110 1
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 263 8.4e-30 2
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 279 4.5e-27 2
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 296 3.6e-26 1
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 291 1.1e-25 1
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 278 1.2e-23 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 276 2.2e-23 1
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 279 3.8e-23 1
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 271 7.8e-23 1
UNIPROTKB|H0YEL8 - symbol:SERGEF "Secretion-regulating gu... 216 8.3e-23 2
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 266 1.2e-22 1
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 256 3.1e-22 2
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 270 3.7e-22 1
UNIPROTKB|Q3MHW0 - symbol:SERGEF "Secretion-regulating gu... 231 4.5e-22 2
MGI|MGI:1351630 - symbol:Sergef "secretion regulating gua... 234 5.6e-22 2
WB|WBGene00021685 - symbol:herc-1 species:6239 "Caenorhab... 223 2.9e-21 2
UNIPROTKB|Q9BL11 - symbol:herc-1 "Protein HERC-1" species... 223 2.9e-21 2
UNIPROTKB|Q9UGK8 - symbol:SERGEF "Secretion-regulating gu... 225 3.7e-21 2
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 231 3.9e-21 2
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 231 3.9e-21 2
UNIPROTKB|F1NXI5 - symbol:SERGEF "Uncharacterized protein... 227 4.2e-21 2
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 235 4.4e-21 2
ZFIN|ZDB-GENE-061220-11 - symbol:sergef "secretion regula... 216 1.1e-20 2
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 256 2.1e-20 1
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 232 3.5e-20 2
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 218 4.6e-20 2
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 257 5.2e-20 1
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 240 6.8e-20 2
UNIPROTKB|Q74DR4 - symbol:GSU1251 "ATS1 domain repeat pro... 255 7.8e-20 2
TIGR_CMR|GSU_1251 - symbol:GSU_1251 "BNR repeat domain pr... 255 7.8e-20 2
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 238 1.1e-19 2
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 217 1.4e-19 2
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 218 1.4e-19 2
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 237 1.5e-19 2
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 252 3.8e-19 1
RGD|1563497 - symbol:Sergef "secretion regulating guanine... 238 6.8e-19 1
MGI|MGI:1890646 - symbol:Nek8 "NIMA (never in mitosis gen... 192 8.7e-19 2
UNIPROTKB|E9PMV6 - symbol:SERGEF "Secretion-regulating gu... 225 1.6e-18 1
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 228 1.9e-18 2
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 234 1.9e-18 2
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 231 1.9e-18 2
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 234 1.9e-18 2
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 228 1.9e-18 2
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 228 1.9e-18 2
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 246 2.8e-18 1
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 238 5.2e-18 2
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 238 5.2e-18 2
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 244 5.2e-18 2
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 244 5.3e-18 1
RGD|1306897 - symbol:Nek8 "NIMA-related kinase 8" species... 181 6.7e-18 2
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 243 6.8e-18 1
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 243 7.1e-18 1
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 218 8.6e-18 2
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 242 9.4e-18 1
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 228 1.1e-17 2
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 216 1.2e-17 2
MGI|MGI:1344037 - symbol:Rpgr "retinitis pigmentosa GTPas... 220 1.8e-17 2
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 235 2.1e-17 1
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 235 2.4e-17 1
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 199 2.5e-17 2
UNIPROTKB|F1S9B1 - symbol:SERGEF "Uncharacterized protein... 227 2.8e-17 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 234 2.8e-17 1
ZFIN|ZDB-GENE-070912-423 - symbol:rpgra "retinitis pigmen... 225 3.4e-17 2
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 238 3.6e-17 2
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 233 3.8e-17 1
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 237 4.1e-17 1
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 232 5.0e-17 1
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 236 5.3e-17 1
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 217 5.5e-17 2
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 209 6.3e-17 2
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 231 6.5e-17 1
UNIPROTKB|G3V1B4 - symbol:SERGEF "Secretion-regulating gu... 225 7.8e-17 1
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 233 1.3e-16 1
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 233 1.3e-16 1
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 233 1.3e-16 1
UNIPROTKB|E1B827 - symbol:NEK8 "Uncharacterized protein" ... 177 1.4e-16 2
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 232 1.4e-16 1
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 238 1.6e-16 1
UNIPROTKB|Q86SG6 - symbol:NEK8 "Serine/threonine-protein ... 176 1.7e-16 2
UNIPROTKB|F1RNC5 - symbol:NEK8 "Uncharacterized protein" ... 176 2.3e-16 2
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 175 2.5e-16 2
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 230 3.0e-16 1
UNIPROTKB|E2QZC2 - symbol:NEK8 "Uncharacterized protein" ... 180 4.2e-16 2
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 234 4.3e-16 1
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 234 4.3e-16 1
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 226 4.9e-16 1
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 188 5.2e-16 2
UNIPROTKB|E1BRZ2 - symbol:NEK8 "Uncharacterized protein" ... 185 5.4e-16 2
ZFIN|ZDB-GENE-020509-1 - symbol:nek8 "NIMA (never in mito... 180 1.4e-15 2
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 206 1.6e-15 2
RGD|1592835 - symbol:Rcc1 "regulator of chromosome conden... 188 3.5e-15 2
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 170 7.4e-15 2
UNIPROTKB|I3LT85 - symbol:RCC1 "Uncharacterized protein" ... 192 1.2e-14 2
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 216 1.3e-14 1
UNIPROTKB|E1BIS5 - symbol:WBSCR16 "Uncharacterized protei... 169 1.3e-14 2
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 181 1.4e-14 2
MGI|MGI:1913989 - symbol:Rcc1 "regulator of chromosome co... 189 1.7e-14 2
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 174 1.8e-14 2
UNIPROTKB|F1RJL0 - symbol:WBSCR16 "Uncharacterized protei... 173 2.0e-14 2
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 214 2.1e-14 1
WARNING: Descriptions of 110 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 1092 (389.5 bits), Expect = 1.4e-110, P = 1.4e-110
Identities = 228/371 (61%), Positives = 267/371 (71%)
Query: 11 HV--NVLTSRIFMRSASGT--AVVSFGDGSQGALGLPTS-LTGVGGDAYEPTRVPGLPSD 65
HV N + R F S SG V+SFGDG+ GALGL +S + G+G DAYEPT V LPSD
Sbjct: 25 HVLFNGVVRRQFT-STSGERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSD 83
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALES-RATWNDPKRVEGLDQVNVCAA 124
++S+SAGHYHSLAVT++G +WAWGRN+E QLGR ++S R + ++PKRVEGL+ VNV AA
Sbjct: 84 ISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAA 143
Query: 125 FASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
FASGVVS+AIGDDGSLWVWG+SKRGQLGLG I EA VPSRVE LA E +VKVS GWGHA
Sbjct: 144 FASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHA 203
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSE 244
LA T DGK+FGWGY ADGR+GN+G LE+S LDS A+K V E
Sbjct: 204 LALTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKGHHAAGDLNLEAAEKKVVE 263
Query: 245 GMEKEKYMPIIWEPFLVEGV---EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQ 301
M KE MPI WEP LVE +V DIACG DHSL+L +G LLS GSN+YGQLGR KQ
Sbjct: 264 AMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQ 323
Query: 302 DMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV 361
D+GM PVDI P+SI++GLGHSLAIC G R I+SWGWNRS QLGR P+N+
Sbjct: 324 DLGMKPVDITESPISIAAGLGHSLAICN-------RGERNILSWGWNRSRQLGRGKPENL 376
Query: 362 PLVVEGLEGES 372
P VEG +GES
Sbjct: 377 PREVEGFDGES 387
Score = 178 (67.7 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 49/129 (37%), Positives = 67/129 (51%)
Query: 63 PSDVT----SVSAGHYHSLAVTNNGA--VWAWGRNNEVQLGRGALESRATWNDPKRVEGL 116
P D+T S++AG HSLA+ N G + +WG N QLGRG E N P+ VEG
Sbjct: 329 PVDITESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPE-----NLPREVEGF 383
Query: 117 DQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVK 176
D + + A V S + + G WVWG K G+LGLG E P +E + G +
Sbjct: 384 DGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEP-EPMLLEDVEGCVLQA 442
Query: 177 VSFGWGHAL 185
V+ G+ H+L
Sbjct: 443 VA-GFDHSL 450
Score = 148 (57.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 51/168 (30%), Positives = 79/168 (47%)
Query: 53 AYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPK 111
A+EP V ++ V ++ G HSL + ++G + + G N QLGR + K
Sbjct: 274 AWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGM-----K 328
Query: 112 RVEGLDQ-VNVCAAFASGVVSSAIGDDGSL-WVWGKSKRGQLGLGKDITEAIVPSRVEAL 169
V+ + +++ A + G+ L W W +S+ QLG GK +P VE
Sbjct: 329 PVDITESPISIAAGLGHSLAICNRGERNILSWGWNRSR--QLGRGKPEN---LPREVEGF 383
Query: 170 AGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKAL-ESSPL 216
GE VS G H+L TE G+ + WG +GR+G LG + E P+
Sbjct: 384 DGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLG-LGSSSDEPEPM 430
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 263 (97.6 bits), Expect = 8.4e-30, Sum P(2) = 8.4e-30
Identities = 75/207 (36%), Positives = 108/207 (52%)
Query: 3 LLKSVVHNHVNVLTSRIFMRSASGTAVVS-FGDGSQGALGLPTSLTGVGGDAYEPTRVPG 61
LLK + V SR ++ S SG + +G G G LGL G + P
Sbjct: 25 LLKDSKLGPIGVCCSR-WVSSESGKRFAAMWGSGDYGRLGL-----GNLDSQWTPAVCSA 78
Query: 62 LPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVN 120
L +T+V+ G H+L +T V+A G N+ QLG ++S A DP V GLD+ +
Sbjct: 79 LSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAM--DPLEVSGLDK-D 135
Query: 121 VCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSF 179
+ A S+AI DG L++WGK+ GQLGLGK + VP++VEAL G I V+
Sbjct: 136 ILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVAL 195
Query: 180 GWGHALAQTEDGKLFGWGYSADGRIGN 206
G H++A T+ G++ WG GR+G+
Sbjct: 196 GSEHSVAVTDGGEVLSWGGGGSGRLGH 222
Score = 211 (79.3 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 57/195 (29%), Positives = 91/195 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V + G G LG+ + V A +P V GL D+ +SAG+YHS A+T +G ++ W
Sbjct: 103 VFATGLNDCGQLGV----SDVKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELYMW 158
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKR 148
G+N+ QLG G +R P +VE L + + + S A+ D G + WG
Sbjct: 159 GKNSSGQLGLGKKAARVV-RVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGS 217
Query: 149 GQLGLGKDIT--------EAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
G+LG G + P ++ L G K+ V+ G H+ E+G F +G +
Sbjct: 218 GRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKS 277
Query: 201 DGRIGNLGKALESSP 215
++G G ++P
Sbjct: 278 INKMGFGGVRNATTP 292
Score = 178 (67.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 56/194 (28%), Positives = 94/194 (48%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGR 90
+G S G LGL V PT+V L + SV+ G HS+AVT+ G V +WG
Sbjct: 158 WGKNSSGQLGLGKKAARV---VRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGG 214
Query: 91 NNEVQLGRG-------ALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDD-GSLWV 142
+LG G L S + + P+ ++ L+ + V A+G++ SA D+ GS ++
Sbjct: 215 GGSGRLGHGHQSSLFGILRSNSEFT-PRLIKELEGIKVTNV-AAGLLHSACTDENGSAFM 272
Query: 143 WGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADG 202
+G+ ++G G + A PS + + + +V+ G H T G+L+ WG + +G
Sbjct: 273 FGEKSINKMGFG-GVRNATTPSIISEVPYAE--EVACGGYHTCVVTRGGELYTWGSNENG 329
Query: 203 RIGNLGKALESSPL 216
+G + SP+
Sbjct: 330 CLGTDSTYVSHSPV 343
Score = 170 (64.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 54/179 (30%), Positives = 82/179 (45%)
Query: 26 GTAVVSFGDGSQGALGL--PTSLTGV--GGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVT 80
G V+S+G G G LG +SL G+ + P + L VT+V+AG HS
Sbjct: 206 GGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTD 265
Query: 81 NNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSL 140
NG+ + +G + ++G G + + T + V ++V C + + VV+ G L
Sbjct: 266 ENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEEV-ACGGYHTCVVTRG----GEL 320
Query: 141 WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIV-KVSFGWGHALAQTEDGKLFGWGY 198
+ WG ++ G LG P RVE E V +VS GW H A D +F WG+
Sbjct: 321 YTWGSNENGCLGTDSTYVSHS-PVRVEGPFLESTVSQVSCGWKHTAA-ISDNNVFTWGW 377
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 47/156 (30%), Positives = 69/156 (44%)
Query: 48 GVGG--DAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRA 105
G GG +A P+ + +P V+ G YH+ VT G ++ WG N LG +S
Sbjct: 282 GFGGVRNATTPSIISEVPY-AEEVACGGYHTCVVTRGGELYTWGSNENGCLGT---DSTY 337
Query: 106 TWNDPKRVEGLDQVNVCAAFASGVV-SSAIGDDGSL-WVWG----------KSKRGQLGL 153
+ P RVEG + + + G ++AI D+ W WG S GQLG
Sbjct: 338 VSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNNVFTWGWGGSHGTFSVDGHSSGGQLGH 397
Query: 154 GKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTE 189
G D+ A P+ V+ + V +S G+ H A E
Sbjct: 398 GSDVDYAR-PAMVDLGKNVRAVHISCGFNHTAAVLE 432
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 56/216 (25%), Positives = 87/216 (40%)
Query: 116 LDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIV 175
L + VC S VSS G + +WG G+LGLG ++ P+ AL+ I
Sbjct: 31 LGPIGVCC---SRWVSSESGKRFAA-MWGSGDYGRLGLG-NLDSQWTPAVCSALSDHSIT 85
Query: 176 KVSFGWGHALAQTEDGKLFGWGYSADGRIG------NLGKALESSPLDSNXXXXXXXXXX 229
V+ G H L TE ++F G + G++G + LE S LD +
Sbjct: 86 AVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYH 145
Query: 230 XXXXXXXKAQKLVSE------GMEKEKYMPIIWEPFLVE---GVEVVDIACGFDHSLVLG 280
+ + G+ K K ++ P VE G+ + +A G +HS+ +
Sbjct: 146 SAAITVDGELYMWGKNSSGQLGLGK-KAARVVRVPTKVEALHGITIQSVALGSEHSVAVT 204
Query: 281 RNGVLLSCGSNVYGQLGREKQD--MGMFPVDINFHP 314
G +LS G G+LG Q G+ + F P
Sbjct: 205 DGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTP 240
Score = 89 (36.4 bits), Expect = 8.4e-30, Sum P(2) = 8.4e-30
Identities = 38/113 (33%), Positives = 54/113 (47%)
Query: 258 PFLVEGVEVVD-IACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN--F-- 312
P ++ V + +ACG H+ V+ R G L + GSN G LG + + PV + F
Sbjct: 292 PSIISEVPYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLE 351
Query: 313 HPVS-ISSGLGHSLAICEVRSSNVT----GGARGIVSW-GWNRSSQLGRMGPD 359
VS +S G H+ AI + +NV GG+ G S G + QLG G D
Sbjct: 352 STVSQVSCGWKHTAAISD---NNVFTWGWGGSHGTFSVDGHSSGGQLGH-GSD 400
Score = 63 (27.2 bits), Expect = 4.4e-27, Sum P(2) = 4.4e-27
Identities = 28/109 (25%), Positives = 42/109 (38%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSG 320
+EG++V ++A G HS NG G ++G P I+ P +
Sbjct: 246 LEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEEVA 305
Query: 321 LGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGP--DNVPLVVEG 367
G C V GG + +WG N + LG + P+ VEG
Sbjct: 306 CG-GYHTCVV----TRGGE--LYTWGSNENGCLGTDSTYVSHSPVRVEG 347
Score = 45 (20.9 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 260 LVEGVEVVDIACGFDHS 276
L + V V I+CGF+H+
Sbjct: 411 LGKNVRAVHISCGFNHT 427
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 279 (103.3 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 71/197 (36%), Positives = 108/197 (54%)
Query: 23 SASGT-AVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTN 81
+A GT +VV +G G P G P RV GL +V ++ G +H+LA+
Sbjct: 156 AAGGTHSVVLTREGHVWTWGQPWP-PGDIKQISVPVRVQGL-ENVRLIAVGAFHNLALEE 213
Query: 82 NGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLW 141
+G + AWG N QLG G +++ T + P V+GLD + + A G S+A+ D G ++
Sbjct: 214 DGRLLAWGNNEYGQLGTG--DTQPT-SHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVY 270
Query: 142 VWGKSKRGQLGLG-KDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
WG+ + G+LGLG D + +VP +V LA E I++VS G H++A T DG++F +G
Sbjct: 271 GWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGD 330
Query: 201 DGRIGNLGKALESSPLD 217
GR+G K PL+
Sbjct: 331 HGRLGYGRKVTTGQPLE 347
Score = 184 (69.8 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 43/122 (35%), Positives = 66/122 (54%)
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
++ AWG + QLG G E + W VE L+ +V + + S AI DDG+++ W
Sbjct: 6 SIIAWGSGEDGQLGIGTNEEKE-WACV--VEALEPYSVRSVVSGSRNSLAICDDGTMFTW 62
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGR 203
G ++RG LG + +PSRV+ALA KI + + G H LA + G+ + WG + G+
Sbjct: 63 GWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 122
Query: 204 IG 205
G
Sbjct: 123 CG 124
Score = 179 (68.1 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 50/181 (27%), Positives = 87/181 (48%)
Query: 25 SGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGA 84
+ T+++++G G G LG+ T+ E P V SV +G +SLA+ ++G
Sbjct: 3 TATSIIAWGSGEDGQLGIGTNEEKEWACVVEALE----PYSVRSVVSGSRNSLAICDDGT 58
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
++ WG N LG E++ T N P RV+ L V + A G A+ D G + WG
Sbjct: 59 MFTWGWNQRGTLGHQP-ETK-TENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWG 116
Query: 145 KSKRGQLG-------LGKDIT-EAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGW 196
++ GQ G +G+ + + ++P R + +V+ G H++ T +G ++ W
Sbjct: 117 GNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL--TVRQVAAGGTHSVVLTREGHVWTW 174
Query: 197 G 197
G
Sbjct: 175 G 175
Score = 174 (66.3 bits), Expect = 9.8e-15, Sum P(3) = 9.8e-15
Identities = 52/157 (33%), Positives = 75/157 (47%)
Query: 56 PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALES---RATWND-- 109
P+RV L + +T + G +H LAV + G +AWG N Q G L+ R D
Sbjct: 82 PSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIV 141
Query: 110 -PKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA 168
PKR ++ V A G S + +G +W WG+ G DI + VP RV+
Sbjct: 142 IPKRCA--PKLTVRQVAAGGTHSVVLTREGHVWTWGQP--WPPG---DIKQISVPVRVQG 194
Query: 169 LAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
L +++ V G H LA EDG+L WG + G++G
Sbjct: 195 LENVRLIAV--GAFHNLALEEDGRLLAWGNNEYGQLG 229
Score = 110 (43.8 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 39/115 (33%), Positives = 55/115 (47%)
Query: 258 PFLVEGVEVVD-IACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI----NF 312
P V+G+E V IA G H+L L +G LL+ G+N YGQLG PV + +
Sbjct: 189 PVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDL 248
Query: 313 HPVSISSGLGHSLAICEVRSSNVTGGARGIVS-WGWNRSSQLGRMGPDNVPLVVE 366
V I++G HS A+ + V G RG G + + +M P V L+ E
Sbjct: 249 TLVDIAAGGWHSTALTD--KGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAE 301
Score = 100 (40.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 139 SLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGY 198
S+ WG + GQLG+G + E VEAL + V G ++LA +DG +F WG+
Sbjct: 6 SIIAWGSGEDGQLGIGTN-EEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGW 64
Query: 199 SADGRIGN 206
+ G +G+
Sbjct: 65 NQRGTLGH 72
Score = 83 (34.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 33/111 (29%), Positives = 48/111 (43%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE--KQDMGMFPVDINFHPVSISSGL 321
V++ A G H L + G + G N YGQ G E K +MG PV + I
Sbjct: 91 VKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGR-PVR---RDIVIPKRC 146
Query: 322 GHSLAICEVRSS---NVTGGARGIVSWGWNRSSQLGRMGPDNVPLVVEGLE 369
L + +V + +V G V W W + G + +VP+ V+GLE
Sbjct: 147 APKLTVRQVAAGGTHSVVLTREGHV-WTWGQPWPPGDIKQISVPVRVQGLE 196
Score = 72 (30.4 bits), Expect = 5.0e-16, Sum P(3) = 5.0e-16
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+++ ++CG HS+ L R+G + S G +G+LG
Sbjct: 303 DIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335
Score = 40 (19.1 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 316 SISSGLGHSLAICEVRSSNV 335
SI+ G H+LAI E +S ++
Sbjct: 374 SIACGGRHTLAIVEWKSDDI 393
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 296 (109.3 bits), Expect = 3.6e-26, P = 3.6e-26
Identities = 97/313 (30%), Positives = 142/313 (45%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTN 81
S SG V S+G G G LG G D + P + L + ++ G H LAVT
Sbjct: 83 SQSGMEVYSWGWGDFGRLG-----HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137
Query: 82 NGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLW 141
G V +WGRN QLG G E P++++ + + + A ++A+ +DG L+
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLV---PQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLY 194
Query: 142 VWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD 201
WG + G LGLG D T+ +VP RV + GEK+ V+ GW H ++ + G L+ +G+S
Sbjct: 195 GWGWGRYGNLGLG-DRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 253
Query: 202 GRIGN--LGKALESSPLD--SNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPI--- 254
G++G+ L L L+ SN KL G K + +
Sbjct: 254 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNN 313
Query: 255 --IWEPFLV---EGVEVVDIACGFDHSL-VLGRNGVLLSCGSNVYGQLG-REKQDMGMFP 307
P V + +VV ++CG+ H+L V RN V + G GQLG E D FP
Sbjct: 314 LDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF-AWGRGTNGQLGIGESVDRN-FP 371
Query: 308 VDINFHPVSISSG 320
I V +SG
Sbjct: 372 KIIEALSVDGASG 384
Score = 242 (90.2 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 63/186 (33%), Positives = 96/186 (51%)
Query: 25 SGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNG 83
SG V S+G G G LG G D PT++ L + SV+ G H++A + +G
Sbjct: 32 SGDIVCSWGRGEDGQLG-----HGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSG 86
Query: 84 A-VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWV 142
V++WG + +LG G T P ++ L + + A+ +G +
Sbjct: 87 MEVYSWGWGDFGRLGHGNSSDLFT---PLPIKALHGIRIKQIACGDSHCLAVTMEGEVQS 143
Query: 143 WGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADG 202
WG+++ GQLGLG D +++VP +++A G +I V+ G H A TEDG L+GWG+ G
Sbjct: 144 WGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGW---G 199
Query: 203 RIGNLG 208
R GNLG
Sbjct: 200 RYGNLG 205
Score = 191 (72.3 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 49/151 (32%), Positives = 77/151 (50%)
Query: 63 PSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC 122
P V +SAG HS+A+ + V +WGR + QLG G E R + ++G V+V
Sbjct: 14 PRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVT 73
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
V S G + W WG G+LG G ++ P ++AL G +I +++ G
Sbjct: 74 CGADHTVAYSQSGMEVYSWGWGDF--GRLGHGNS-SDLFTPLPIKALHGIRIKQIACGDS 130
Query: 183 HALAQTEDGKLFGWGYSADGRIGNLGKALES 213
H LA T +G++ WG + +G++G LG +S
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLG-LGDTEDS 160
Score = 160 (61.4 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 62/250 (24%), Positives = 109/250 (43%)
Query: 118 QVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
+V + +A AS V+ GD + WG+ + GQLG G D + P+++ AL G +IV V
Sbjct: 16 KVLIISAGASHSVALLSGD--IVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSV 72
Query: 178 SFGWGHALAQTEDG-KLFGWGYSADGRIGNLGKALESSPLDSNXXXXXXXXXXXXXXXXX 236
+ G H +A ++ G +++ WG+ GR+G+ + +PL
Sbjct: 73 TCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHC 132
Query: 237 KAQKLVSE----GMEKEKYMPI-IWEPFLV-------EGVEVVDIACGFDHSLVLGRNGV 284
A + E G + + + E LV EG+ + +A G +H+ + +G
Sbjct: 133 LAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGD 192
Query: 285 LLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVS 344
L G YG LG + + P V+ + G S+ C R + + + +
Sbjct: 193 LYGWGWGRYGNLGLGDRTDRLVP-----ERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247
Query: 345 WGWNRSSQLG 354
+GW++ QLG
Sbjct: 248 YGWSKYGQLG 257
Score = 99 (39.9 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI----NFHPVSIS 318
G ++ +ACG+ H++ + +G L + G + YGQLG + + P + N IS
Sbjct: 223 GEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQIS 282
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
G H++A+ T + + WGWN+ Q+G
Sbjct: 283 GGWRHTMAL--------TSDGK-LYGWGWNKFGQVG 309
Score = 91 (37.1 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHP----VSISSGL 321
+ I+ G+ H++ L +G L G N +GQ+G PV + F V +S G
Sbjct: 278 ISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGW 337
Query: 322 GHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPD---NVPLVVEGL 368
H+LA+ E R++ + +WG + QLG +G N P ++E L
Sbjct: 338 RHTLAVTE-RNN--------VFAWGRGTNGQLG-IGESVDRNFPKIIEAL 377
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 61/163 (37%), Positives = 96/163 (58%)
Query: 56 PTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEG 115
P RV GL +V ++ G +H+LA+ +G +WAWG N QLG G + R+ P V+G
Sbjct: 189 PVRVQGL-ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSY---PIPVQG 244
Query: 116 LDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLG-KDITEAIVPSRVEALAGEKI 174
LD + + A G S+A+ ++G ++ WG+ + G+LG G D + ++P +V LAGE I
Sbjct: 245 LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDI 304
Query: 175 VKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLD 217
++VS G H++A T DG++F +G GR+G K PL+
Sbjct: 305 IQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLE 347
Score = 217 (81.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 88/294 (29%), Positives = 127/294 (43%)
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
+V AWG + QLG G E + V+ L+ NV + S AI DDG L+ W
Sbjct: 6 SVIAWGSGEDGQLGLGTDEEKEL---ASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTW 62
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGR 203
G ++RG LG + PS V++LA KIV+ + G H LA + G+ + WG + G+
Sbjct: 63 GWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 122
Query: 204 IGNLGKALESS-PLDSNXXX----XXXXXXXXXXXXXXKAQKLVSEGME---KEKYMP-- 253
G E+ P+ + + L EG + + P
Sbjct: 123 CGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGD 182
Query: 254 I--IWEPFLVEGVEVVD-IACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
I I P V+G+E V IA G H+L L +G L + G+N YGQLG +P+
Sbjct: 183 IKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPI-- 240
Query: 311 NFHPVSISSGLGHSLAICEVRSSNVTGGA---RGIVSWGWNRSSQLGRMG-PDN 360
PV GL L + ++ + A G V +GW R GR+G DN
Sbjct: 241 ---PVQ---GLD-DLTLVDIAAGGWHSTALTNEGEV-YGWGRGEH-GRLGFGDN 285
Score = 209 (78.6 bits), Expect = 9.0e-20, Sum P(2) = 9.0e-20
Identities = 49/140 (35%), Positives = 75/140 (53%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V V+AG HS+ +T G VW WG+ G ++ + P RV+GL+ V + A
Sbjct: 152 VRQVAAGGTHSVVLTREGYVWTWGQ----PWPPGDIKQISV---PVRVQGLENVRLIAVG 204
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHAL 185
A + A+ +DG+LW WG ++ GQLG G D P V+ L +V ++ G H+
Sbjct: 205 AFH--NLALKEDGTLWAWGNNEYGQLGTG-DTQPRSYPIPVQGLDDLTLVDIAAGGWHST 261
Query: 186 AQTEDGKLFGWGYSADGRIG 205
A T +G+++GWG GR+G
Sbjct: 262 ALTNEGEVYGWGRGEHGRLG 281
Score = 176 (67.0 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 60/187 (32%), Positives = 91/187 (48%)
Query: 24 ASGTAVVSFGDGSQGALGLPTS----LTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAV 79
AS T+V+++G G G LGL T L V DA EP +V SV G +SLA+
Sbjct: 2 ASATSVIAWGSGEDGQLGLGTDEEKELASVV-DALEPF-------NVRSVVGGSRNSLAI 53
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
++G ++ WG N LG E++ T + P V+ L V + A G A+ D G
Sbjct: 54 CDDGKLFTWGWNQRGTLGHPP-ETK-TESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGR 111
Query: 140 LWVWGKSKRGQLGL--GKDIT------EAIVPSRVEALAGEKIVK-VSFGWGHALAQTED 190
+ WG ++ GQ G KD T + ++P R A + V+ V+ G H++ T +
Sbjct: 112 AYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRC---AQQLTVRQVAAGGTHSVVLTRE 168
Query: 191 GKLFGWG 197
G ++ WG
Sbjct: 169 GYVWTWG 175
Score = 85 (35.0 bits), Expect = 9.0e-20, Sum P(2) = 9.0e-20
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 260 LVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH 313
L+ G +++ ++CG HS+ L R+G + S G +G+LG ++ P+++ H
Sbjct: 298 LLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIH 351
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 278 (102.9 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 67/187 (35%), Positives = 106/187 (56%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGR 90
++G LG T+ GV T + G VT VS G +HSLA+T+ G V+AWG
Sbjct: 98 AWGHNGYSQLGNGTTNQGVS-PILVSTNLQG--KRVTEVSCGSHHSLALTHEGEVFAWGY 154
Query: 91 NNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AIGDDGSLWVWGKSKRG 149
NN Q+G G+ ++ T P++V Q V A G SS A+ D+G ++ WG + G
Sbjct: 155 NNCGQVGSGSTANQPT---PRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNG 211
Query: 150 QLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGK 209
QLGLG + + + P R+ AL G +++++ G+ H+LA T++G L+ WG + G++G K
Sbjct: 212 QLGLGNNGNQ-LTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNK 270
Query: 210 ALESSPL 216
+ + SP+
Sbjct: 271 SNQLSPV 277
Score = 181 (68.8 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 59/197 (29%), Positives = 92/197 (46%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSL---TGVGGDAYEPTRVPGLPSD-VTSVSAGHY 74
IF SA+ ++ D LGL S TG P ++ L + S+S G
Sbjct: 26 IFGASANEAIYITHDDEVY-VLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSG 84
Query: 75 -HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE-GLDQVNVCAAFASGVVSS 132
H L VT +G ++AWG N QLG G + P V L V S
Sbjct: 85 PHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVS---PILVSTNLQGKRVTEVSCGSHHSL 141
Query: 133 AIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVE-ALAGEKIVKVSFGWGHALAQTEDG 191
A+ +G ++ WG + GQ+G G + P +V L + IV ++ G ++A T++G
Sbjct: 142 ALTHEGEVFAWGYNNCGQVGSGSTANQP-TPRKVSNCLQNKVIVNIACGQTSSMAVTDNG 200
Query: 192 KLFGWGYSADGRIGNLG 208
+++GWGY+ +G++G LG
Sbjct: 201 EVYGWGYNGNGQLG-LG 216
Score = 169 (64.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 52/157 (33%), Positives = 82/157 (52%)
Query: 48 GVGGDAYEPT--RVPGLPSD--VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALES 103
G G A +PT +V + + +++ G S+AVT+NG V+ WG N QLG G +
Sbjct: 161 GSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGN 220
Query: 104 RATWNDPKRVEGLDQVNVCAAFASGVVSS-AIGDDGSLWVWGKSKRGQLGLGKDITEAIV 162
+ T P R+ L V ASG S A+ D+G L+ WG + GQLG G + +
Sbjct: 221 QLT---PCRLIALQGFCVLQ-IASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQ-LS 275
Query: 163 PSRVEALAGEKIVKVSFGWG-H-ALAQTEDGKLFGWG 197
P +V E+IV+++ H + A+T+ G+++ WG
Sbjct: 276 PVQVMT-EKERIVEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 129 (50.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 40/124 (32%), Positives = 63/124 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V +G G LGL G G+ P R+ L V +++G+ HSLA+T+ G ++A
Sbjct: 202 VYGWGYNGNGQLGL-----GNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYA 256
Query: 88 WGRNNEVQLGRGALESRATWNDPKRV-EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG N QLG G +++ P +V +++ AA S S+A G +++WG+
Sbjct: 257 WGANTYGQLGTG---NKSNQLSPVQVMTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQC 313
Query: 147 KRGQ 150
RGQ
Sbjct: 314 -RGQ 316
Score = 97 (39.2 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
++G V+ IA G+ HSL L G+L + G+N YGQLG + + PV +
Sbjct: 230 LQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQV 279
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 276 (102.2 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 69/198 (34%), Positives = 107/198 (54%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLA 78
I + + G V ++G + LG T+ G+ + T + V V+ G YHSL
Sbjct: 111 IVLATTDGE-VFTWGHNAYSQLGNGTTNHGLV-PCHISTNLSN--KQVIEVACGSYHSLV 166
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASG-VVSSAIGDD 137
+T++G V+AWG NN Q+G G S A P+RV G Q V A G + S A+ D
Sbjct: 167 LTSDGEVFAWGYNNSGQVGSG---STANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDT 223
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++VWG + GQLGLG + P RV AL G ++ +V+ G+ H L T++G+++ WG
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQP-TPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Query: 198 YSADGRIGNLGKALESSP 215
++ G++G K+ +S P
Sbjct: 283 ANSYGQLGTGNKSNQSYP 300
Score = 172 (65.6 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 55/197 (27%), Positives = 97/197 (49%)
Query: 11 HVNV-LTSRIFMRSASGT--AVVSFGDGSQGALGLPTS-LTGVGGDAYEPT--RVPGLPS 64
H++ L+++ + A G+ ++V DG A G S G G A +P RV G
Sbjct: 144 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQ 203
Query: 65 D--VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC 122
+ V +++ G S+AV + G V+ WG N QLG G+ ++ T P RV L + V
Sbjct: 204 NKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT---PCRVAALQGIRVQ 260
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
+ + D+G ++ WG + GQLG G ++ P+ V + ++I++++
Sbjct: 261 RVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY-PTPV-VVEKDRIIEIAACHS 318
Query: 183 -H-ALAQTEDGKLFGWG 197
H + A+T+ G ++ WG
Sbjct: 319 AHTSAAKTQGGHVYMWG 335
Score = 169 (64.5 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 43/148 (29%), Positives = 76/148 (51%)
Query: 70 SAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA-AFASG 128
SAG+ L T N ++ G N LG G ++S +P+R++ L + + ++ SG
Sbjct: 53 SAGN-EVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI---EPRRLDSLTGKKIASLSYGSG 108
Query: 129 VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA-LAGEKIVKVSFGWGHALAQ 187
DG ++ WG + QLG G +VP + L+ +++++V+ G H+L
Sbjct: 109 PHIVLATTDGEVFTWGHNAYSQLGNGTT-NHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167
Query: 188 TEDGKLFGWGYSADGRIGNLGKALESSP 215
T DG++F WGY+ G++G+ A + P
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIP 195
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 43/123 (34%), Positives = 63/123 (51%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
V +G G LGL G G+ P RV L V V+ G+ H+L +T+ G ++A
Sbjct: 226 VYVWGYNGNGQLGL-----GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYA 280
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG N+ QLG G +S ++ P VE D++ AA S S+A G +++WG+
Sbjct: 281 WGANSYGQLGTGN-KSNQSYPTPVVVEK-DRIIEIAACHSAHTSAAKTQGGHVYMWGQC- 337
Query: 148 RGQ 150
RGQ
Sbjct: 338 RGQ 340
Score = 104 (41.7 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 26/94 (27%), Positives = 43/94 (45%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSG 320
++G+ V +ACG+ H+LVL G + + G+N YGQLG + +P PV +
Sbjct: 254 LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPT-----PVVVEKD 308
Query: 321 LGHSLAICEVRSSNVTGGARG-IVSWGWNRSSQL 353
+A C ++ G + WG R +
Sbjct: 309 RIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 342
Score = 68 (29.0 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 31/105 (29%), Positives = 41/105 (39%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHSL 325
V++IACG S+ + G + G N GQLG G P V+ G+
Sbjct: 207 VMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS--GNQPTPCR---VAALQGIRVQR 261
Query: 326 AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN----VPLVVE 366
C + V I +WG N QLG N P+VVE
Sbjct: 262 VACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE 306
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 279 (103.3 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 84/293 (28%), Positives = 138/293 (47%)
Query: 70 SAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGV 129
++G +HSL + ++G V + G N+ QLGR + P+R+ L+ +NV
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLGR---KGTPRGEQPERIPALETLNVALVSCGKE 85
Query: 130 VSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTE 189
S A+ G ++ WG + GQLG+G+ +P +++ LAG KI++V+ G H++A +E
Sbjct: 86 HSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSE 145
Query: 190 DGKLFGWGYSADGRIG-----------NLGKALESSPL-----DSNXXXXXXXXXXXXXX 233
DG++F WG ++ G++G ++LE PL +
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGW 205
Query: 234 XXXKAQKLVSEGMEK--EKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSN 291
A +L G ++Y P+ GV V I+CG+ H+ VL ++G + + G N
Sbjct: 206 GSNSAGQLALSGNNAPVQRYKPVSIGALKTLGV--VSISCGYKHTAVLTQDGKVFTFGDN 263
Query: 292 VYGQLGREK--QDMGMFPVDINFHPVS-ISSGLGHSLAICEVRSSNVTGGARG 341
YGQLG + + G V+ VS I G H+LA V+ G RG
Sbjct: 264 SYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG-RG 315
Score = 277 (102.6 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 88/282 (31%), Positives = 131/282 (46%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNN 82
+ GT V S GD S+G LG + G +P R+P L + +V VS G HSLAV +
Sbjct: 40 SDGT-VQSCGDNSRGQLGRKGTPRGE-----QPERIPALETLNVALVSCGKEHSLAVCHK 93
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWV 142
G V+AWG +E QLG G E + T PK+++ L + + S A+ +DG ++
Sbjct: 94 GRVFAWGAASEGQLGIG--EFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFS 151
Query: 143 WGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADG 202
WG + GQLGLGK+ P RV +L G + +V+ G H+ A + G FGWG ++ G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211
Query: 203 RI---GNLGKALESSPLDSNXXXXXXXXXXX----XXXXXXKAQKLVSEGMEKEKYM--- 252
++ GN P+ + K+ + G +
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 253 PIIWE--PFLVEGVE--VVDIACGFDHSLV-LGRNGVLLSCG 289
P + P LVE +E V I CG DH+L + G ++S G
Sbjct: 272 PTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 271 (100.5 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 66/198 (33%), Positives = 107/198 (54%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLA 78
I + + G V ++G + LG T+ G+ + T + V V+ G YHSL
Sbjct: 111 IVLATTEGE-VFTWGHNAYSQLGNGTTNHGLV-PCHISTNLSN--KQVIEVACGSYHSLV 166
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASG-VVSSAIGDD 137
+T++G V+AWG NN Q+G G+ ++ P+RV G Q V A G + A+ D
Sbjct: 167 LTSDGEVFAWGYNNSGQVGSGSTVNQPI---PRRVTGCLQNKVVVTIACGQMCCMAVVDT 223
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++VWG + GQLGLG + P RV AL G ++ +V+ G+ H L T++G+++ WG
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGNQP-TPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Query: 198 YSADGRIGNLGKALESSP 215
++ G++G K+ +S P
Sbjct: 283 ANSYGQLGTGNKSNQSYP 300
Score = 168 (64.2 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 41/139 (29%), Positives = 74/139 (53%)
Query: 70 SAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV-CAAFASG 128
SAG+ L T N ++ G N LG G ++S +P+R++ L+ + C ++ SG
Sbjct: 53 SAGN-EVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI---EPRRLDSLNGKKIACLSYGSG 108
Query: 129 VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA-LAGEKIVKVSFGWGHALAQ 187
+G ++ WG + QLG G +VP + L+ +++++V+ G H+L
Sbjct: 109 PHIVLATTEGEVFTWGHNAYSQLGNGTT-NHGLVPCHISTNLSNKQVIEVACGSYHSLVL 167
Query: 188 TEDGKLFGWGYSADGRIGN 206
T DG++F WGY+ G++G+
Sbjct: 168 TSDGEVFAWGYNNSGQVGS 186
Score = 166 (63.5 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 52/183 (28%), Positives = 84/183 (45%)
Query: 33 GDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHY-HSLAVTNNGAVWAWGR 90
G G LGL G EP R+ L + +S G H + T G V+ WG
Sbjct: 71 GTNCCGCLGL-----GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGH 125
Query: 91 NNEVQLGRGALE-SRATWNDPKRVEGLDQVNV-CAAFASGVVSSAIGDDGSLWVWGKSKR 148
N QLG G + + + V C ++ S V++S DG ++ WG +
Sbjct: 126 NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS----DGEVFAWGYNNS 181
Query: 149 GQLGLGKDITEAIVPSRVEA-LAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNL 207
GQ+G G + + I P RV L + +V ++ G +A + G+++ WGY+ +G++G L
Sbjct: 182 GQVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG-L 239
Query: 208 GKA 210
G +
Sbjct: 240 GNS 242
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 53/197 (26%), Positives = 94/197 (47%)
Query: 11 HVNV-LTSRIFMRSASGT--AVVSFGDGSQGALGLPTS-LTGVGGDAYEPT--RVPGLPS 64
H++ L+++ + A G+ ++V DG A G S G G +P RV G
Sbjct: 144 HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQ 203
Query: 65 D--VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC 122
+ V +++ G +AV + G V+ WG N QLG G ++ T P RV L + V
Sbjct: 204 NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPT---PCRVAALQGIRVQ 260
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
+ + D+G ++ WG + GQLG G ++ P+ V + ++I++++
Sbjct: 261 RVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY-PTPV-TVEKDRIIEIAACHS 318
Query: 183 -H-ALAQTEDGKLFGWG 197
H + A+T+ G ++ WG
Sbjct: 319 THTSAAKTQGGHVYMWG 335
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 44/123 (35%), Positives = 63/123 (51%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
V +G G LGL G G+ P RV L V V+ G+ H+L +T+ G V+A
Sbjct: 226 VYVWGYNGNGQLGL-----GNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYA 280
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG N+ QLG G +S ++ P VE D++ AA S S+A G +++WG+
Sbjct: 281 WGANSYGQLGTGN-KSNQSYPTPVTVEK-DRIIEIAACHSTHTSAAKTQGGHVYMWGQC- 337
Query: 148 RGQ 150
RGQ
Sbjct: 338 RGQ 340
Score = 106 (42.4 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 26/94 (27%), Positives = 44/94 (46%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSG 320
++G+ V +ACG+ H+LVL G + + G+N YGQLG + +P PV++
Sbjct: 254 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPT-----PVTVEKD 308
Query: 321 LGHSLAICEVRSSNVTGGARG-IVSWGWNRSSQL 353
+A C ++ G + WG R +
Sbjct: 309 RIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSV 342
Score = 59 (25.8 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 29/105 (27%), Positives = 38/105 (36%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHSL 325
VV IACG + + G + G N GQLG G P V+ G+
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNS--GNQPTPCR---VAALQGIRVQR 261
Query: 326 AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN----VPLVVE 366
C + V + +WG N QLG N P+ VE
Sbjct: 262 VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 216 (81.1 bits), Expect = 8.3e-23, Sum P(2) = 8.3e-23
Identities = 54/155 (34%), Positives = 78/155 (50%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRA-----TWNDPKRVEGLDQVN 120
V ++AG H++A T +G V+ WG GR + T +P RV GL+
Sbjct: 19 VVCIAAGLRHAVAATASGIVFQWG-TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSK 77
Query: 121 VCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA--LAGEKIVKVS 178
A S+++ D G ++VWG +K GQL + VP ++EA EK+ +
Sbjct: 78 AMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA--NEAAFLPVPQKIEAHCFQNEKVTAIW 135
Query: 179 FGWGHALAQTEDGKLFGWGYSADGRIGNLGKALES 213
GW H +AQTE GK+F WG AD G LG+ LE+
Sbjct: 136 SGWTHLVAQTETGKMFTWG-RAD--YGQLGRKLET 167
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 60/206 (29%), Positives = 85/206 (41%)
Query: 23 SASGTAVVSFGDG--SQGALGLPTSLTGVGGDAYEPTRVPGLP-SDVTSVSAGHYHSLAV 79
+ASG V +G G S G P + A EP+RV GL S V AG HS ++
Sbjct: 33 TASGI-VFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 91
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEG--LDQVNVCAAFASGVVSSAIGDD 137
T+ G V+ WG N QL A A P+++E V A ++ A +
Sbjct: 92 TDAGEVYVWGSNKHGQLANEA----AFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTET 147
Query: 138 GSLWVWGKSKRGQLGLGKDITEA-----------------IVPSRVEALAGEKIVKVSFG 180
G ++ WG++ GQLG + E +PS L G +VS G
Sbjct: 148 GKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGA--TEVSCG 205
Query: 181 WGHALAQTEDGKLFGWGYSADGRIGN 206
H LA G + WG++ G G+
Sbjct: 206 SEHNLAII-GGVCYSWGWNEHGMCGD 230
Score = 82 (33.9 bits), Expect = 8.3e-23, Sum P(2) = 8.3e-23
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 268 DIACGFDHSL-VLGRNGVLLSCGSNVYGQLG--REKQDMGMFPVD--INFHPVSISSGLG 322
+++CG +H+L ++G GV S G N +G G E PV ++ + + G G
Sbjct: 201 EVSCGSEHNLAIIG--GVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAG 258
Query: 323 HSLAICEV 330
HSLA+C++
Sbjct: 259 HSLALCQL 266
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 266 (98.7 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 64/188 (34%), Positives = 101/188 (53%)
Query: 33 GDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNN 92
GDG G LG P GG P++V L V SVS G + ++A+T G +W WG N+
Sbjct: 233 GDGRLG-LG-PGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANS 290
Query: 93 EVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLG 152
+LGRG ++ W +P V L+ V + G S A+ ++G + WG GQLG
Sbjct: 291 NYELGRG--DNLGGW-EPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLG 347
Query: 153 LGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG-KAL 211
+ VP+ +EALA +KIV ++ G + A T+ G+L+ WG + D ++G G +
Sbjct: 348 -SSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEI 406
Query: 212 ESSPLDSN 219
+++P++ N
Sbjct: 407 QTTPVEVN 414
Score = 198 (74.8 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 56/163 (34%), Positives = 79/163 (48%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWG 89
++G S LG +L GG +EP VP L +T ++ G YHSLA+T G V +WG
Sbjct: 285 NWGANSNYELGRGDNL---GG--WEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWG 339
Query: 90 RNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRG 149
QLG +L ++ P +E L + + G S+AI D G LW+WG +K
Sbjct: 340 HGGHGQLGSSSLRNQKV---PTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDF 396
Query: 150 QLGLGKDITEA-IVPSRVEALAGE------KIVKVSFGWGHAL 185
QLG+ + E P V L E K++ +S G HAL
Sbjct: 397 QLGV-PGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHAL 438
Score = 159 (61.0 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 60/196 (30%), Positives = 92/196 (46%)
Query: 31 SFGDGSQGALG--------LPTSLTGV---GGDAYEPTRVPG-LPSDVTS----VSAGHY 74
S+G G+ G LG P+ + + ++ + PG + +D +S +S G +
Sbjct: 52 SWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISCGLF 111
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWN-DPKRVEGLDQVNVCAAFASGVVSSA 133
HS +T +G +W WG+ + +LG G S N +P E + C A G+ S A
Sbjct: 112 HS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEE--HSIR-CIALG-GLHSVA 166
Query: 134 IGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKL 193
+ G ++ WG G LG K T +VP RV+ KI ++ H A TE G+L
Sbjct: 167 LTHQGDVFTWGYGGFGALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGEL 225
Query: 194 FGWGYS-ADGRIGNLG 208
+ WG DGR+G LG
Sbjct: 226 YMWGREEGDGRLG-LG 240
Score = 111 (44.1 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 45/126 (35%), Positives = 55/126 (43%)
Query: 256 WEPFLV---EGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF 312
WEP V EGV + IACG HSL L G +LS G +GQLG P +I
Sbjct: 303 WEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEA 362
Query: 313 HP----VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMG-PD--NVPLVV 365
V I+SG S AI + GG + WG + QLG G P+ P+ V
Sbjct: 363 LADKKIVFIASGGSSSAAITD-------GGE--LWMWGNAKDFQLGVPGLPEIQTTPVEV 413
Query: 366 EGLEGE 371
L E
Sbjct: 414 NFLTEE 419
Score = 80 (33.2 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 33/111 (29%), Positives = 49/111 (44%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI-NFHPVSISS--- 319
V V ++CG ++ L + G L + G+N +LGR G P+ + + V I+
Sbjct: 262 VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIAC 321
Query: 320 GLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--VPLVVEGL 368
G HSLA+ E ++SWG QLG N VP +E L
Sbjct: 322 GGYHSLALTEEGK---------VLSWGHGGHGQLGSSSLRNQKVPTEIEAL 363
Score = 45 (20.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 192 KLFGWGYSADGRIG 205
+LF WG A G++G
Sbjct: 49 QLFSWGRGASGQLG 62
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 256 (95.2 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 72/204 (35%), Positives = 108/204 (52%)
Query: 11 HVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT--- 67
H+ + +F+ S G V + G+G+ G LGL GV + P ++P L V
Sbjct: 3023 HIAGGSKSLFIVSQDGK-VYACGEGTNGRLGL-----GVTHNVPLPHQLPVLRQYVVKKV 3076
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFAS 127
+V +G H+LA+T +G V++WG + +LG G +R T + P+ VE L +
Sbjct: 3077 AVHSGGKHALALTLDGKVFSWGEGEDGKLGHG---NRTTLDKPRLVEALRAKKIRDVACG 3133
Query: 128 GVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--L 185
S+AI G L+ WG + G+LG G + T+ + P V ALAG ++V+V+ G A L
Sbjct: 3134 SSHSAAISSQGELYTWGLGEYGRLGHGDNTTQ-LKPKLVTALAGRRVVQVACGSRDAQTL 3192
Query: 186 AQTEDGKLFGWGYSADGRIGNLGK 209
A TEDG +F WG DG G LG+
Sbjct: 3193 ALTEDGAVFSWG---DGDFGKLGR 3213
Score = 225 (84.3 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 64/184 (34%), Positives = 96/184 (52%)
Query: 34 DGSQGALGLPTS-LTGVGG-DAYE-PTRVPGLPS---DVTSVSAGHYHSLAVTNNGAVWA 87
DG A G + GVGG D++ PT + L +V++G H LA+T G V+A
Sbjct: 4100 DGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYA 4159
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG + +LG G +R +++ PK VE L+ ++V S+AI G + WGK +
Sbjct: 4160 WGEGEDGKLGHG---NRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGR 4216
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKLFGWGYSADGRIG 205
G+LG G D + + P VEAL G + + ++ G G A L T+D ++ WG DG G
Sbjct: 4217 YGRLGHG-DSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWG---DGDYG 4272
Query: 206 NLGK 209
LG+
Sbjct: 4273 KLGR 4276
Score = 202 (76.2 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 86/335 (25%), Positives = 143/335 (42%)
Query: 60 PGLPSDVTSVSAGHYHSLAVTNNG---AVWAWGRNNEVQLG--RGALESRATWNDPKRVE 114
PG + +VS H + A V WG N++ QLG +G+ T++ + +
Sbjct: 2960 PGSTAGAGAVSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLGGLKGSKVKVPTFS--QTIS 3017
Query: 115 GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAI-VPSRVEALAGEK 173
L +++ S + + DG ++ G+ G+LGLG +T + +P ++ L
Sbjct: 3018 RLRPIHIAGGSKSLFI---VSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLRQYV 3072
Query: 174 IVKVSF--GWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSP--LDS-NXXXXXXXXX 228
+ KV+ G HALA T DGK+F WG DG++G+ + P +++
Sbjct: 3073 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVAC 3132
Query: 229 XXXXXXXXKAQ-KLVSEGMEKEKYM-----PIIWEPFLVE---GVEVVDIACGF-D-HSL 277
+Q +L + G+ + + +P LV G VV +ACG D +L
Sbjct: 3133 GSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTL 3192
Query: 278 VLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTG 337
L +G + S G +G+LGR + P H + SG+G C + S
Sbjct: 3193 ALTEDGAVFSWGDGDFGKLGRGGSEGSDTP-----HEIERLSGIGVVQIECGAQFSLALT 3247
Query: 338 GARGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEG 370
A + +WG +LG G +V P + GL G
Sbjct: 3248 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRG 3282
Score = 198 (74.8 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 68/254 (26%), Positives = 111/254 (43%)
Query: 55 EPTRVPGLPSDVTSVSAGHY---HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPK 111
EP + + DV AGH H LA+ +N ++WG + +LG G +RA P
Sbjct: 604 EPLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV---PT 660
Query: 112 RVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAG 171
++ L+Q V + + S+AI G+L WG+ +LG G ++ P+ V AL+
Sbjct: 661 KIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSL-PTLVVALSD 719
Query: 172 EKIVKVSFGWG--HALAQTEDGKLFGWGYSADGRIGN--LGKALESSPLDSNXXXXXXXX 227
+V V+ G G H+LA T +G +F WG G++GN +L+ ++S
Sbjct: 720 HMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFA 779
Query: 228 XXXXXXXXXKAQKLVSEGMEK-------EKYMPIIWEPFLVEGVE---VVDIACGFDHSL 277
+L + G E+ + P LV ++ +VD+A H L
Sbjct: 780 GSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCL 839
Query: 278 VLGRNGVLLSCGSN 291
L +G + G N
Sbjct: 840 ALSSSGEVFGWGRN 853
Score = 197 (74.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 54/188 (28%), Positives = 94/188 (50%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS----DVTSVSAGHYHSLA 78
+ASG V+++G G G LG G D P V L D+ + +G +L
Sbjct: 4204 TASGH-VLTWGKGRYGRLG-----HGDSEDQLRPKLVEALLGYRAIDI-ACGSGDAQTLC 4256
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG 138
+T++ VW+WG + +LGRG + P ++E L + V S A+ G
Sbjct: 4257 ITDDDNVWSWGDGDYGKLGRGGSDGCKL---PYKIESLAGLGVVKVECGSQFSVALTKSG 4313
Query: 139 SLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGY 198
+++ WGK +LG G + P +V AL G+KI+ ++ G H +A ++ G+++ WG
Sbjct: 4314 AVYTWGKGDFHRLGHGS-VDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGD 4372
Query: 199 SADGRIGN 206
+ +G++G+
Sbjct: 4373 NDEGQLGD 4380
Score = 196 (74.1 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 59/197 (29%), Positives = 97/197 (49%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHY--HSLAV 79
S+ G + ++G G G LG + T + +P V L V V+ G +LA+
Sbjct: 3141 SSQGE-LYTWGLGEYGRLGHGDNTTQL-----KPKLVTALAGRRVVQVACGSRDAQTLAL 3194
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV-CAAFASGVVSSAIGDDG 138
T +GAV++WG + +LGRG E T ++ +R+ G+ V + C A S ++ A G
Sbjct: 3195 TEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRA----G 3250
Query: 139 SLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGY 198
+W WGK +LG G D P + L G +++ V+ G H LA T+ G+++ WG
Sbjct: 3251 EVWTWGKGDYYRLGHGGD-QHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGD 3309
Query: 199 SADGRIGNLGKALESSP 215
+ G+ G+ + P
Sbjct: 3310 NDHGQQGSGNTFVNKKP 3326
Score = 196 (74.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 72/267 (26%), Positives = 113/267 (42%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVW 86
V ++G+G G LG ++ Y+ P V L V ++ G HS A+T +G V
Sbjct: 4157 VYAWGEGEDGKLGHGNRMS------YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVL 4210
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVN-VCAAFASGVVSS-AIGDDGSLWVWG 144
WG+ +LG G E + PK VE L + A SG + I DD ++W WG
Sbjct: 4211 TWGKGRYGRLGHGDSEDQLR---PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWG 4267
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
G+LG G +P ++E+LAG +VKV G ++A T+ G ++ WG R+
Sbjct: 4268 DGDYGKLGRGGS-DGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRL 4326
Query: 205 GN-----LGKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLV----SEGMEKEKYMPII 255
G+ + + + + L + EG + + I
Sbjct: 4327 GHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAI 4386
Query: 256 WEPFLV---EGVEVVDIACGFDHSLVL 279
P LV +G +V + CG H+L L
Sbjct: 4387 QRPRLVAALQGKHIVKVTCGSAHTLAL 4413
Score = 192 (72.6 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 59/195 (30%), Positives = 92/195 (47%)
Query: 26 GTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT---SVSAGHYHSLAVTNN 82
G ++++G G+ LG G D PT V L + ++ +G HSLA+T+
Sbjct: 686 GGNLLTWGRGTYARLG-----HGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 740
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWV 142
G V+AWG + +LG G P VE L +V FA S A+ +G L+
Sbjct: 741 GLVFAWGDGDYGKLGNGNCNGSL---QPILVESLPRVQ--RVFAGSQFSVALSSEGQLYT 795
Query: 143 WGKSK-RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD 201
WGK+ G + + + VP V +L ++IV V+ H LA + G++FGWG +
Sbjct: 796 WGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDS 855
Query: 202 GRIGNLGKALESSPL 216
+I ++ S PL
Sbjct: 856 QQI--CPASVSSEPL 868
Score = 170 (64.9 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 53/183 (28%), Positives = 86/183 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V S+G+G G LG T +P V L + + V+ G HS A+++ G ++
Sbjct: 3094 VFSWGEGEDGKLGHGNRTT-----LDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYT 3148
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLD--QVNVCAAFASGVVSSAIGDDGSLWVWGK 145
WG +LG G T PK V L +V A + + A+ +DG+++ WG
Sbjct: 3149 WGLGEYGRLGHG---DNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3205
Query: 146 SKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
G+LG G + P +E L+G +V++ G +LA T G+++ WG R+G
Sbjct: 3206 GDFGKLGRGGS-EGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG 3264
Query: 206 NLG 208
+ G
Sbjct: 3265 HGG 3267
Score = 166 (63.5 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 73/258 (28%), Positives = 113/258 (43%)
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
G +++ WG + RGQLG G + + P+ EAL+ + V+++ G A T DGKLF
Sbjct: 4046 GGASTIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLF 4104
Query: 195 GWGYSADGRIGNLGKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGM-------E 247
GY + GR+G G + P L +EG E
Sbjct: 4105 ATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGE 4164
Query: 248 KEKY---MPIIWE-PFLVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR-E 299
K + ++ P LVE G+ V DIACG HS + +G +L+ G YG+LG +
Sbjct: 4165 DGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD 4224
Query: 300 KQDMGMFPVDINFHPVSISSGLGH-SLAI-C---EVRSSNVTGGARGIVSWGWNRSSQLG 354
+D P + + LG+ ++ I C + ++ +T + SWG +LG
Sbjct: 4225 SEDQ--------LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN-VWSWGDGDYGKLG 4275
Query: 355 RMGPDN--VPLVVEGLEG 370
R G D +P +E L G
Sbjct: 4276 RGGSDGCKLPYKIESLAG 4293
Score = 157 (60.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 56/186 (30%), Positives = 86/186 (46%)
Query: 18 RIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYE---PTRVPGLPSD-VTSVSAGH 73
R F+ S S+G G LG GD + PT++ L V SV G
Sbjct: 626 RHFLAIDSNHNAYSWGTGEDHRLG--------HGDTHARAVPTKIAALEQHCVQSVYCGC 677
Query: 74 YHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL-DQVNVCAAFASGVVSS 132
+S A+T G + WGR +LG G + R+ P V L D + V A SG S
Sbjct: 678 SYSAAITCGGNLLTWGRGTYARLGHGNSDDRSL---PTLVVALSDHMVVDVALGSGDAHS 734
Query: 133 -AIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDG 191
A+ +G ++ WG G+LG G + ++ P VE+L ++ +V G ++A + +G
Sbjct: 735 LALTSEGLVFAWGDGDYGKLGNG-NCNGSLQPILVESLP--RVQRVFAGSQFSVALSSEG 791
Query: 192 KLFGWG 197
+L+ WG
Sbjct: 792 QLYTWG 797
Score = 148 (57.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 55/185 (29%), Positives = 86/185 (46%)
Query: 27 TAVVSFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPSDVTSVS-AGHYHSL-AVTNNG 83
+ + +G +G LG G+ G + PT L S + V AG SL AVT +G
Sbjct: 4049 STIYGWGHNHRGQLG------GLEGSRIKTPTPCEAL-SLLRPVQLAGGEQSLFAVTPDG 4101
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--CAAFASGVVSSAIGDDGSLW 141
++A G + +LG G +S W P + L V V A + G A+ +G ++
Sbjct: 4102 KLFATGYGSGGRLGVGGSDS---WAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVY 4158
Query: 142 VWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD 201
WG+ + G+LG G ++ P VE L G + ++ G H+ A T G + WG
Sbjct: 4159 AWGEGEDGKLGHGNRMSYDR-PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRY 4217
Query: 202 GRIGN 206
GR+G+
Sbjct: 4218 GRLGH 4222
Score = 136 (52.9 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 44/134 (32%), Positives = 67/134 (50%)
Query: 78 AVTNNGA--VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AI 134
A++ GA ++ WG N+ QLG G SR P E L + A G S A+
Sbjct: 4042 ALSWGGASTIYGWGHNHRGQLG-GLEGSRI--KTPTPCEALSLLRP-VQLAGGEQSLFAV 4097
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG--HALAQTEDGK 192
DG L+ G G+LG+G + AI P+ + +L + KV+ G H LA T +G+
Sbjct: 4098 TPDGKLFATGYGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGE 4156
Query: 193 LFGWGYSADGRIGN 206
++ WG DG++G+
Sbjct: 4157 VYAWGEGEDGKLGH 4170
Score = 100 (40.3 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 31/77 (40%), Positives = 39/77 (50%)
Query: 48 GVGGDAY--EPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESR 104
G GGD + +P + GL V V+ G H LAVT+ G V+AWG N+ Q G G +
Sbjct: 3264 GHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG---NT 3320
Query: 105 ATWNDPKRVEGLDQVNV 121
P V GLD V V
Sbjct: 3321 FVNKKPALVIGLDAVFV 3337
Score = 73 (30.8 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 32/123 (26%), Positives = 54/123 (43%)
Query: 258 PFLVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI---- 310
P+ +E G+ VV + CG S+ L ++G + + G + +LG D P +
Sbjct: 4285 PYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQ 4344
Query: 311 NFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGL 368
+SI++G H +A C G + +WG N QLG + P +V L
Sbjct: 4345 GKKIISIATGSLHCVA-CS------DSGE--VYTWGDNDEGQLGDGTVTAIQRPRLVAAL 4395
Query: 369 EGE 371
+G+
Sbjct: 4396 QGK 4398
Score = 62 (26.9 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI----NFHPVS 316
++G +++ IA G H + +G + + G N GQLG P + H V
Sbjct: 4343 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVK 4402
Query: 317 ISSGLGHSLAI 327
++ G H+LA+
Sbjct: 4403 VTCGSAHTLAL 4413
Score = 54 (24.1 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 19/70 (27%), Positives = 31/70 (44%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP-VDINFHPV---S 316
+ G V+ +A G H L + G + + G N +GQ G + P + I V
Sbjct: 3280 LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNR 3339
Query: 317 ISSGLGHSLA 326
++ G HS+A
Sbjct: 3340 VACGSSHSIA 3349
Score = 47 (21.6 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 257 EPFLVEGVEVV---DIACGFDHSLVLG 280
+P LV G++ V +ACG HS+ G
Sbjct: 3325 KPALVIGLDAVFVNRVACGSSHSIAWG 3351
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 270 (100.1 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 86/307 (28%), Positives = 134/307 (43%)
Query: 28 AVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVW 86
+V + G S G LG GG P V L + ++ VS G HSLAV G V+
Sbjct: 54 SVYTCGSNSCGQLGHDK-----GGS--RPELVGALDAQKISGVSCGQAHSLAVNEQGQVF 106
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
AWG + QLG G E P+ ++ L + + A+ DG L+VWG++
Sbjct: 107 AWGAGDGGQLGLGTAEEAV--RVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGEN 164
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
GQLGLGK + P +++L G + ++S G H+ A + G +FGWG ++ G++G
Sbjct: 165 SSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGL 224
Query: 207 LGKALESSP-----LDSNXXXXXXXXXXXXXXXXXKAQKLV----SEGM---EKEKYMPI 254
+ + P L S + S+G + + P+
Sbjct: 225 NDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPL 284
Query: 255 IWEPFLVEGVEVVDIACGFDHSLV-LGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI-NF 312
+ G EV IACG +H+L + G++ + G N GQLG + PV + N
Sbjct: 285 PRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNI 344
Query: 313 HPVSISS 319
P+ I +
Sbjct: 345 QPLCIGN 351
Score = 206 (77.6 bits), Expect = 8.2e-19, Sum P(2) = 8.2e-19
Identities = 61/190 (32%), Positives = 94/190 (49%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
++ +G G LG+ S V +EP + V+ G+ HSL + ++G+V+
Sbjct: 2 MLCWGSSGAGQLGIGASEASV----FEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYT 57
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
G N+ QLG SR P+ V LD + S A+ + G ++ WG
Sbjct: 58 CGSNSCGQLGHDKGGSR-----PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGD 112
Query: 148 RGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
GQLGLG EA+ VP ++ L +I +V G H +A ++DG+LF WG ++ G++G
Sbjct: 113 GGQLGLGT-AEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLG- 170
Query: 207 LGKALESSPL 216
LGK E S L
Sbjct: 171 LGKG-EPSTL 179
Score = 190 (71.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 62/224 (27%), Positives = 109/224 (48%)
Query: 2 RLLKSVVHNHVNVL---TSRIFMRSASGTAVVSFGDGSQGALGL----PTSLTGVGGDAY 54
RL+K + + ++ + S G V +G+ S G LGL P++L+
Sbjct: 129 RLIKKLCEHRISQVMCGNHHCIALSKDGQLFV-WGENSSGQLGLGKGEPSTLSP------ 181
Query: 55 EPTR-VPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRV 113
+P + + G+P +T +SAG HS A++ +GAV+ WG+N+ QLG + RA P +
Sbjct: 182 QPLKSLCGIP--LTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAV---PCHI 236
Query: 114 EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEK 173
+ L V ++A+ +G L+ +G +GQLG E + P RV L G +
Sbjct: 237 KFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPL-PRRVMELMGTE 295
Query: 174 IVKVSFGWGHALAQTED-GKLFGWGYSADGRIGNLGKALESSPL 216
+ +++ G H LA G ++ +G + G++G + SP+
Sbjct: 296 VSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPV 339
Score = 95 (38.5 bits), Expect = 8.2e-19, Sum P(2) = 8.2e-19
Identities = 34/106 (32%), Positives = 48/106 (45%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG-REKQDMGMFPVDINF----HPVSI 317
G+ + I+ G DHS L +G + G N GQLG ++QD + P I F V I
Sbjct: 189 GIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAV-PCHIKFLRSQKVVYI 247
Query: 318 SSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNVPL 363
S G H+ A+ + GG + ++G QLG N PL
Sbjct: 248 SCGEEHTAALTK------EGG---LFTFGNGSKGQLGHDSTRNEPL 284
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 231 (86.4 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 67/191 (35%), Positives = 93/191 (48%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V+S G S G LG+P P + L V S++AG H+LA T +G V+ W
Sbjct: 122 VLSCGSNSFGQLGVPHGPRR----CVIPQAIELLREKVVSIAAGLRHALAATASGTVFQW 177
Query: 89 GR---NNEVQLGRG-ALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
G ++ +L G L T +P V GL+ A S+++ D G L+VWG
Sbjct: 178 GTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWG 237
Query: 145 KSKRGQLGLGKDITEAIVPSRVEA--LAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADG 202
+K GQL ++P R+EA EKI V GW H +AQT GK+F WG AD
Sbjct: 238 SNKHGQLA--SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWG-RAD- 293
Query: 203 RIGNLGKALES 213
G LG+ +E+
Sbjct: 294 -YGQLGRTVET 303
Score = 158 (60.7 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 48/181 (26%), Positives = 81/181 (44%)
Query: 25 SGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGA 84
+ A+ ++G S G LGL + G + ++ G HS VT+ G+
Sbjct: 13 TAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGC---IKRITGGGGHSAVVTDEGS 69
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
++ G N + QLG G E + K + G V + ++ + ++G + G
Sbjct: 70 LFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTII---LTENGQVLSCG 126
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG--YSADG 202
+ GQLG+ ++P +E L EK+V ++ G HALA T G +F WG ++ G
Sbjct: 127 SNSFGQLGVPHGPRRCVIPQAIELLR-EKVVSIAAGLRHALAATASGTVFQWGTGLASSG 185
Query: 203 R 203
R
Sbjct: 186 R 186
Score = 144 (55.7 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 42/133 (31%), Positives = 69/133 (51%)
Query: 74 YHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSA 133
+ S AV A++AWG N+ QLG G E + +++ + G SA
Sbjct: 6 HSSEAVPTAAALFAWGANSYGQLGLGHKEDVLS---AQQLSDFCKSGCIKRITGGGGHSA 62
Query: 134 I-GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGK 192
+ D+GSL+V G +K GQLGLG E + + ++L G I +V+ GW + TE+G+
Sbjct: 63 VVTDEGSLFVCGLNKDGQLGLGHT-EEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQ 121
Query: 193 LFGWGYSADGRIG 205
+ G ++ G++G
Sbjct: 122 VLSCGSNSFGQLG 134
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 37/112 (33%), Positives = 56/112 (50%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMG-MFPVDINF---HPVSIS 318
G + +ACG+D +++L NG +LSCGSN +GQLG + P I VSI+
Sbjct: 100 GCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLREKVVSIA 159
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGP-DNVPLVVEGLE 369
+GL H+LA + +G + WG +S R+ P +PL + E
Sbjct: 160 AGLRHALA------ATASGT---VFQWGTGLASSGRRLCPGQTLPLFLTAKE 202
Score = 83 (34.3 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 268 DIACGFDHSL-VLGRNGVLLSCGSNVYGQLG--REKQDMGMFPVD-INFH-PVSISSGLG 322
+I+CG +H+L V+G GV S G N +G G E PV + F + + G G
Sbjct: 337 EISCGSEHNLAVIG--GVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCGAG 394
Query: 323 HSLAICEVRSSNVTGGARGIVS 344
HSLA+C++ + G + S
Sbjct: 395 HSLALCQLPALPALGQHPSVTS 416
Score = 73 (30.8 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 36/108 (33%), Positives = 45/108 (41%)
Query: 257 EPFLVEGVEVVDIAC---GFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN-- 311
EP V G+E C G DHS L G L GSN +GQL + + + P I
Sbjct: 202 EPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQAAFL-LLPQRIEAR 260
Query: 312 -FHPVSIS---SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGR 355
F I+ SG H +A VTG + +WG QLGR
Sbjct: 261 CFQNEKIAAVWSGWTHLVA------QTVTGK---VFTWGRADYGQLGR 299
Score = 49 (22.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 27/103 (26%), Positives = 38/103 (36%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR----------EKQDMGMFPVD--INF 312
++ + G+ H + G + + G YGQLGR EKQD + P
Sbjct: 266 KIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSL-PGSGPQKG 324
Query: 313 HPVSISSGLGHSLAIC-EVRSSNVTGGARGIVSWGWNRSSQLG 354
P + G + C + V GG SWGWN G
Sbjct: 325 TPSCLPCLTGATEISCGSEHNLAVIGGV--CHSWGWNEHGMCG 365
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 234 (87.4 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 68/190 (35%), Positives = 96/190 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V+S G + G LG+P P + L V V+AG H+LA T G+V+ W
Sbjct: 122 VLSCGSNAFGQLGVPHGPR----KCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQW 177
Query: 89 GR---NNEVQLGRGA-LESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
G ++ +L G L T +P RV GL+ A A S+++ D G L+VWG
Sbjct: 178 GTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWG 237
Query: 145 KSKRGQLGLGKDITEAIVPSRVEA--LAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADG 202
++K GQL + + + P R+EA EK+ V GW H +A+TE GK+F WG AD
Sbjct: 238 RNKHGQLA-SRAVFLPL-PQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWG-RAD- 293
Query: 203 RIGNLGKALE 212
G LG+ LE
Sbjct: 294 -YGQLGRRLE 302
Score = 166 (63.5 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 56/186 (30%), Positives = 87/186 (46%)
Query: 23 SASGTAVV-SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGL--PSDVTSVSAGHYHSLAV 79
+ S AV+ ++G S G LGL G D + P ++ + SV+ G HS V
Sbjct: 10 TVSAAAVLFAWGANSYGQLGL-----GHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVV 64
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T+ G ++ G N + QLG G E + K + G V + ++ + + G
Sbjct: 65 TDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIM---LTEKGQ 121
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG-- 197
+ G + GQLG+ + +VP +E L EK+V V+ G HALA T G +F WG
Sbjct: 122 VLSCGSNAFGQLGVPHGPRKCVVPQAIECLR-EKVVCVAAGLRHALATTATGSVFQWGTG 180
Query: 198 YSADGR 203
++ GR
Sbjct: 181 LASSGR 186
Score = 148 (57.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 60/200 (30%), Positives = 85/200 (42%)
Query: 26 GTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP-SDVTSVSAGHYHSLAVTNNGA 84
GT + S G LP LT A EP+RV GL S AG HS ++T+ G
Sbjct: 178 GTGLASSGRRLCPGQNLPLFLT-----AKEPSRVTGLENSTAVCAVAGSDHSASLTDTGE 232
Query: 85 VWAWGRNNEVQLGRGALESRATWND-PKRVEG--LDQVNVCAAFASGVVSSAIGDDGSLW 141
++ WGRN G L SRA + P+R+E V A ++ A + G ++
Sbjct: 233 LYVWGRNKH-----GQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVF 287
Query: 142 VWGKSKRGQLGLGKDITEAIVPSRVE---ALAGEK------------IVKVSFGWGHALA 186
WG++ GQLG + EA P + A G + ++S G H LA
Sbjct: 288 TWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLA 347
Query: 187 QTEDGKLFGWGYSADGRIGN 206
D K WG++ G G+
Sbjct: 348 VIRD-KCCSWGWNEHGMCGD 366
Score = 140 (54.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 43/132 (32%), Positives = 66/132 (50%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI- 134
S V+ ++AWG N+ QLG G E P+++ Q + G SA+
Sbjct: 8 SETVSAAAVLFAWGANSYGQLGLGHKEDVFL---PQQLSDFCQAGCIKSVTGGGGHSAVV 64
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGWGHALAQTEDGKL 193
D G L+V G +K GQLGLG TE ++ + + L G I +V+ GW + TE G++
Sbjct: 65 TDGGDLFVCGLNKDGQLGLGH--TEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQV 122
Query: 194 FGWGYSADGRIG 205
G +A G++G
Sbjct: 123 LSCGSNAFGQLG 134
Score = 119 (46.9 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMG-MFPVDINF---HPVS 316
+ G + +ACG+D +++L G +LSCGSN +GQLG + P I V
Sbjct: 98 LRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVC 157
Query: 317 ISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGP-DNVPLVVEGLE 369
+++GL H+LA + TG + WG +S R+ P N+PL + E
Sbjct: 158 VAAGLRHALA------TTATGS---VFQWGTGLASSGRRLCPGQNLPLFLTAKE 202
Score = 106 (42.4 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 31/88 (35%), Positives = 45/88 (51%)
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVK-VSFGWGHA 184
AS VS+A L+ WG + GQLGLG + +P ++ +K V+ G GH+
Sbjct: 7 ASETVSAA----AVLFAWGANSYGQLGLGHK-EDVFLPQQLSDFCQAGCIKSVTGGGGHS 61
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGKALE 212
T+ G LF G + DG++G LG E
Sbjct: 62 AVVTDGGDLFVCGLNKDGQLG-LGHTEE 88
Score = 78 (32.5 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 268 DIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVS------ISSGL 321
+I+CG +H+L + R+ S G N +G G + P + P S + G
Sbjct: 337 EISCGSEHNLAVIRDKCC-SWGWNEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGA 395
Query: 322 GHSLAICEV 330
GHSLA+C++
Sbjct: 396 GHSLAVCQL 404
Score = 66 (28.3 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 37/120 (30%), Positives = 47/120 (39%)
Query: 257 EPFLVEGVEVVDIAC---GFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH 313
EP V G+E C G DHS L G L G N +GQL + + P I H
Sbjct: 202 EPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLPL-PQRIEAH 260
Query: 314 ------PVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGR-MGPDNVPLVVE 366
++ SG H +A E TG + +WG QLGR + P VE
Sbjct: 261 YFQDEKVTAVWSGWTHLVAKTE------TGK---VFTWGRADYGQLGRRLEPPEAQKPVE 311
Score = 60 (26.2 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 33/117 (28%), Positives = 46/117 (39%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDM-GMFPVD----INFH-PV-SI 317
+V + G+ H + G + + G YGQLGR + PV+ + F P S+
Sbjct: 266 KVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSV 325
Query: 318 SSGLGHSLA-ICEVRSS---NVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGL 368
S L H L E+ N+ SWGWN G NV P V+ L
Sbjct: 326 PSPL-HCLTGATEISCGSEHNLAVIRDKCCSWGWNEHGMCGDGTESNVWTPTPVQAL 381
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 223 (83.6 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 59/176 (33%), Positives = 91/176 (51%)
Query: 33 GDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-----VTSVSAGHYHSLAVTNNGAVWA 87
G +G LG+ S + + P R+ G P+D VTSV+ G H++ +T +G +W+
Sbjct: 9 GHTGEGQLGVRLSESTI----QVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWS 64
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
G N + QLGRG+ + P ++ +A S VS + DDG ++ WG ++
Sbjct: 65 VGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVS--VTDDGRVFAWGSNE 122
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGR 203
GQLG+ T P RV+ + IV+V+ G H +A E G++F WG ADGR
Sbjct: 123 HGQLGMESKFTWQGTPRRVQEI--NDIVQVASGSNHCIALDEGGRVFVWGEQADGR 176
Score = 197 (74.4 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 47/141 (33%), Positives = 80/141 (56%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWND-PKRVEGLDQVNVCAA 124
+ +SAG H+++VT++G V+AWG N QLG +ES+ TW P+RV+ ++ + A+
Sbjct: 96 IIQISAGRSHTVSVTDDGRVFAWGSNEHGQLG---MESKFTWQGTPRRVQEINDIVQVAS 152
Query: 125 FASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
++ + A+ + G ++VWG+ G+ + + P VE L+G IV+V G H
Sbjct: 153 GSNHCI--ALDEGGRVFVWGEQADGRC-IHR-------PEPVEQLSGVPIVRVLAGARHC 202
Query: 185 LAQTEDGKLFGWGYSADGRIG 205
LA + G +F WG + G +G
Sbjct: 203 LALSASGAVFTWGQNNSGELG 223
Score = 172 (65.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 48/163 (29%), Positives = 84/163 (51%)
Query: 55 EPT-RVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRV 113
EP ++ G+P + V AG H LA++ +GAV+ WG+NN +LG L + + ++
Sbjct: 182 EPVEQLSGVP--IVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQM 239
Query: 114 EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEK 173
+GL V V+ + G S +G GQ G GK + + P+ V L G
Sbjct: 240 DGLGVVEAACGDNHTVLLTHCGRTFS---FGSDALGQCGFGKKVEKRTNPTAVSDLIGSH 296
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKAL-ESSP 215
+ +++ G H +A + G + +G ++ G++GN GK + +S+P
Sbjct: 297 VTRIAAGACHTIAICK-GAPYPFGLNSSGQLGN-GKIMTQSTP 337
Score = 167 (63.8 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 50/184 (27%), Positives = 84/184 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V ++G G LG+ + T G P RV + +D+ V++G H +A+ G V+ W
Sbjct: 115 VFAWGSNEHGQLGMESKFTWQG----TPRRVQEI-NDIVQVASGSNHCIALDEGGRVFVW 169
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKR 148
G + GR + P+ VE L V + A A+ G+++ WG++
Sbjct: 170 GEQAD---GRCI-------HRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNS 219
Query: 149 GQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
G+LG+ D+ V + G +V+ + G H + T G+ F +G A G+ G G
Sbjct: 220 GELGID-DLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCG-FG 277
Query: 209 KALE 212
K +E
Sbjct: 278 KKVE 281
Score = 132 (51.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEG----LDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
G E QLG ES T P+R+ G +D V + + + DG +W G
Sbjct: 9 GHTGEGQLGVRLSES--TIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVG 66
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
+ GQLG G + V + KI+++S G H ++ T+DG++F WG + G++
Sbjct: 67 SNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQL 126
Query: 205 G 205
G
Sbjct: 127 G 127
Score = 132 (51.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 36/102 (35%), Positives = 53/102 (51%)
Query: 254 IIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH 313
II P ++G V + CG H++ L ++G + S GSN+ GQLGR + G F + +
Sbjct: 31 IIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSI----Y 86
Query: 314 PVSISSGLGHSLAICEVRSSNVTGGARG-IVSWGWNRSSQLG 354
PVS +S + I RS V+ G + +WG N QLG
Sbjct: 87 PVSWTSS-AKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLG 127
Score = 98 (39.6 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 34/99 (34%), Positives = 51/99 (51%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG-REKQDMGMFPV---D-INFHPV 315
++G+ VV+ ACG +H+++L G S GS+ GQ G +K + P D I H
Sbjct: 239 MDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVT 298
Query: 316 SISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
I++G H++AIC+ GA +G N S QLG
Sbjct: 299 RIAAGACHTIAICK--------GAP--YPFGLNSSGQLG 327
Score = 65 (27.9 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+ GV +V + G H L L +G + + G N G+LG
Sbjct: 187 LSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELG 223
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 223 (83.6 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 59/176 (33%), Positives = 91/176 (51%)
Query: 33 GDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-----VTSVSAGHYHSLAVTNNGAVWA 87
G +G LG+ S + + P R+ G P+D VTSV+ G H++ +T +G +W+
Sbjct: 9 GHTGEGQLGVRLSESTI----QVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWS 64
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
G N + QLGRG+ + P ++ +A S VS + DDG ++ WG ++
Sbjct: 65 VGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVS--VTDDGRVFAWGSNE 122
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGR 203
GQLG+ T P RV+ + IV+V+ G H +A E G++F WG ADGR
Sbjct: 123 HGQLGMESKFTWQGTPRRVQEI--NDIVQVASGSNHCIALDEGGRVFVWGEQADGR 176
Score = 197 (74.4 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 47/141 (33%), Positives = 80/141 (56%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWND-PKRVEGLDQVNVCAA 124
+ +SAG H+++VT++G V+AWG N QLG +ES+ TW P+RV+ ++ + A+
Sbjct: 96 IIQISAGRSHTVSVTDDGRVFAWGSNEHGQLG---MESKFTWQGTPRRVQEINDIVQVAS 152
Query: 125 FASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
++ + A+ + G ++VWG+ G+ + + P VE L+G IV+V G H
Sbjct: 153 GSNHCI--ALDEGGRVFVWGEQADGRC-IHR-------PEPVEQLSGVPIVRVLAGARHC 202
Query: 185 LAQTEDGKLFGWGYSADGRIG 205
LA + G +F WG + G +G
Sbjct: 203 LALSASGAVFTWGQNNSGELG 223
Score = 172 (65.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 48/163 (29%), Positives = 84/163 (51%)
Query: 55 EPT-RVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRV 113
EP ++ G+P + V AG H LA++ +GAV+ WG+NN +LG L + + ++
Sbjct: 182 EPVEQLSGVP--IVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQM 239
Query: 114 EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEK 173
+GL V V+ + G S +G GQ G GK + + P+ V L G
Sbjct: 240 DGLGVVEAACGDNHTVLLTHCGRTFS---FGSDALGQCGFGKKVEKRTNPTAVSDLIGSH 296
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKAL-ESSP 215
+ +++ G H +A + G + +G ++ G++GN GK + +S+P
Sbjct: 297 VTRIAAGACHTIAICK-GAPYPFGLNSSGQLGN-GKIMTQSTP 337
Score = 167 (63.8 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 50/184 (27%), Positives = 84/184 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V ++G G LG+ + T G P RV + +D+ V++G H +A+ G V+ W
Sbjct: 115 VFAWGSNEHGQLGMESKFTWQG----TPRRVQEI-NDIVQVASGSNHCIALDEGGRVFVW 169
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKR 148
G + GR + P+ VE L V + A A+ G+++ WG++
Sbjct: 170 GEQAD---GRCI-------HRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNS 219
Query: 149 GQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
G+LG+ D+ V + G +V+ + G H + T G+ F +G A G+ G G
Sbjct: 220 GELGID-DLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCG-FG 277
Query: 209 KALE 212
K +E
Sbjct: 278 KKVE 281
Score = 132 (51.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEG----LDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
G E QLG ES T P+R+ G +D V + + + DG +W G
Sbjct: 9 GHTGEGQLGVRLSES--TIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVG 66
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
+ GQLG G + V + KI+++S G H ++ T+DG++F WG + G++
Sbjct: 67 SNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQL 126
Query: 205 G 205
G
Sbjct: 127 G 127
Score = 132 (51.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 36/102 (35%), Positives = 53/102 (51%)
Query: 254 IIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH 313
II P ++G V + CG H++ L ++G + S GSN+ GQLGR + G F + +
Sbjct: 31 IIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSI----Y 86
Query: 314 PVSISSGLGHSLAICEVRSSNVTGGARG-IVSWGWNRSSQLG 354
PVS +S + I RS V+ G + +WG N QLG
Sbjct: 87 PVSWTSS-AKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLG 127
Score = 98 (39.6 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 34/99 (34%), Positives = 51/99 (51%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG-REKQDMGMFPV---D-INFHPV 315
++G+ VV+ ACG +H+++L G S GS+ GQ G +K + P D I H
Sbjct: 239 MDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVT 298
Query: 316 SISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
I++G H++AIC+ GA +G N S QLG
Sbjct: 299 RIAAGACHTIAICK--------GAP--YPFGLNSSGQLG 327
Score = 65 (27.9 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+ GV +V + G H L L +G + + G N G+LG
Sbjct: 187 LSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELG 223
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 225 (84.3 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 63/192 (32%), Positives = 90/192 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V+S G S G LG+P P + V ++AG H++A T +G V+ W
Sbjct: 122 VLSCGSNSFGQLGVPHGPRR----CVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQW 177
Query: 89 GRNNEVQLGRGALESRA-----TWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
G GR + T +P RV GL+ A S+++ D G ++VW
Sbjct: 178 G-TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVW 236
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEA--LAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD 201
G +K GQL + VP ++EA EK+ + GW H +AQTE GK+F WG AD
Sbjct: 237 GSNKHGQLA--NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWG-RAD 293
Query: 202 GRIGNLGKALES 213
G LG+ LE+
Sbjct: 294 --YGQLGRKLET 303
Score = 158 (60.7 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 50/175 (28%), Positives = 80/175 (45%)
Query: 25 SGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGL--PSDVTSVSAGHYHSLAVTNN 82
+ A+ ++G S G LGL G D P ++ P V ++ G HS VT+
Sbjct: 13 AAAALFAWGANSYGQLGL-----GHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDG 67
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWV 142
G ++ G N + QLG G E + K + G V + ++ + ++G +
Sbjct: 68 GDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIM---LTENGQVLS 124
Query: 143 WGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G + GQLG+ +VP +E L EK+V ++ G HA+A T G +F WG
Sbjct: 125 CGSNSFGQLGVPHGPRRCVVPQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWG 178
Score = 132 (51.5 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 42/125 (33%), Positives = 67/125 (53%)
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQV-NVCAAFASGVVSSAIGDDGSLWV 142
A++AWG N+ QLG G E P+++ + +V G S+ + D G L+V
Sbjct: 16 ALFAWGANSYGQLGLGHKEDVLL---PQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFV 72
Query: 143 WGKSKRGQLGLGKDITEAIVP--SRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
G +K GQLGLG TE I P + ++L G I +V+ GW + TE+G++ G ++
Sbjct: 73 CGLNKDGQLGLGH--TEDI-PYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNS 129
Query: 201 DGRIG 205
G++G
Sbjct: 130 FGQLG 134
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 60/206 (29%), Positives = 85/206 (41%)
Query: 23 SASGTAVVSFGDG--SQGALGLPTSLTGVGGDAYEPTRVPGLP-SDVTSVSAGHYHSLAV 79
+ASG V +G G S G P + A EP+RV GL S V AG HS ++
Sbjct: 169 TASGI-VFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 227
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEG--LDQVNVCAAFASGVVSSAIGDD 137
T+ G V+ WG N QL A A P+++E V A ++ A +
Sbjct: 228 TDAGEVYVWGSNKHGQLANEA----AFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTET 283
Query: 138 GSLWVWGKSKRGQLGLGKDITEA-----------------IVPSRVEALAGEKIVKVSFG 180
G ++ WG++ GQLG + E +PS L G +VS G
Sbjct: 284 GKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGA--TEVSCG 341
Query: 181 WGHALAQTEDGKLFGWGYSADGRIGN 206
H LA G + WG++ G G+
Sbjct: 342 SEHNLAII-GGVCYSWGWNEHGMCGD 366
Score = 119 (46.9 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 32/88 (36%), Positives = 45/88 (51%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMG-MFPVDINFHP---VSIS 318
G + +ACG+D +++L NG +LSCGSN +GQLG + P I H V I+
Sbjct: 100 GCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIA 159
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWG 346
+GL H A+ S V G+ S G
Sbjct: 160 AGLRH--AVAATASGIVFQWGTGLASCG 185
Score = 107 (42.7 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 131 SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVK-VSFGWGHALAQTE 189
S A +L+ WG + GQLGLG + ++P ++ + V+ ++ G GH+ T+
Sbjct: 8 SEAAPAAAALFAWGANSYGQLGLGHK-EDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD 66
Query: 190 DGKLFGWGYSADGRIGNLG 208
G LF G + DG++G LG
Sbjct: 67 GGDLFVCGLNKDGQLG-LG 84
Score = 82 (33.9 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 268 DIACGFDHSL-VLGRNGVLLSCGSNVYGQLG--REKQDMGMFPVD--INFHPVSISSGLG 322
+++CG +H+L ++G GV S G N +G G E PV ++ + + G G
Sbjct: 337 EVSCGSEHNLAIIG--GVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAG 394
Query: 323 HSLAICEV 330
HSLA+C++
Sbjct: 395 HSLALCQL 402
Score = 72 (30.4 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 33/128 (25%), Positives = 51/128 (39%)
Query: 257 EPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI--NFHP 314
E + +V I G+ H + G + + G YGQLGR+ + + ++ +F P
Sbjct: 258 EAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLP 317
Query: 315 VSISSGLGHSLAICEVRSSNVTGGAR-------GIV-SWGWNRSSQLGRMGPDNV--PLV 364
S S C ++ V+ G+ G+ SWGWN G NV P
Sbjct: 318 CSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIGGVCYSWGWNEHGMCGDGTEANVWAPKP 377
Query: 365 VEGLEGES 372
V+ L S
Sbjct: 378 VQALLSSS 385
Score = 70 (29.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 36/108 (33%), Positives = 45/108 (41%)
Query: 257 EPFLVEGVEVVDIAC---GFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH 313
EP V G+E C G DHS L G + GSN +GQL E + + P I H
Sbjct: 202 EPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPV-PQKIEAH 260
Query: 314 ------PVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGR 355
+I SG H +A E TG + +WG QLGR
Sbjct: 261 CFQNEKVTAIWSGWTHLVAQTE------TGK---MFTWGRADYGQLGR 299
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 231 (86.4 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 85/332 (25%), Positives = 148/332 (44%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT---SVSAGHYH 75
+F + G V + G+ + G LGL S G P ++ L + V +V +G H
Sbjct: 3008 LFAVTVEGK-VYACGEATNGRLGLGIS----SGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
++A+T +G +++WG ++ +LG SR + P+ +E L + S+AI
Sbjct: 3063 AMALTVDGKIFSWGEGDDGKLGHF---SRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3119
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKL 193
G L+ WG + G+LG G + T+ + P V+ L G ++++V+ G A LA T++G +
Sbjct: 3120 SSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 3178
Query: 194 FGWGYSADGRIGNLGKA-LESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGME----K 248
F WG DG G LG+ E + N + L G+ K
Sbjct: 3179 FSWG---DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3235
Query: 249 EKYMPI-------IWEPFLVEGV---EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
Y + + +P +VEG+ ++V +A G H L + G + + G N +GQ G
Sbjct: 3236 GDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3295
Query: 299 EKQDMGMFPV---DINFHPVS-ISSGLGHSLA 326
+ P + ++ ++ G HS+A
Sbjct: 3296 GTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 227 (85.0 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 61/178 (34%), Positives = 88/178 (49%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVS--AGHYHSLAV 79
+A G + ++G G+ G LG G D P V GL V VS +G +LAV
Sbjct: 568 TAEGE-LYTWGRGNYGRLG-----HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T NG VW+WG + +LGRG + T PK +E L +++ S A+ DG
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKT---PKLIEKLQDLDIVKVRCGSQFSIALTKDGQ 678
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
++ WGK +LG G + P +E L G+K++ V+ G H LA TED ++ WG
Sbjct: 679 VYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 216 (81.1 bits), Expect = 7.9e-17, Sum P(2) = 7.9e-17
Identities = 59/184 (32%), Positives = 93/184 (50%)
Query: 34 DGSQGALGLPTS-LTGVGG--DAYEPTRVPGLPS---DVTSVSAGHYHSLAVTNNGAVWA 87
DG A G G+GG PT + + +V++G H LA+++ G V++
Sbjct: 4008 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4067
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG + +LG G +R+ + P+ +E L + V A G S+ I G L+ WGK +
Sbjct: 4068 WGEAEDGKLGHG---NRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGR 4124
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKLFGWGYSADGRIG 205
G+LG G D + + P VEAL G +++ ++ G G A L T+D ++ WG DG G
Sbjct: 4125 YGRLGHG-DSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWG---DGDYG 4180
Query: 206 NLGK 209
LG+
Sbjct: 4181 KLGR 4184
Score = 196 (74.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 85/284 (29%), Positives = 121/284 (42%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
+ + S GH H LA++ NG V++WG + +LG G + G
Sbjct: 499 IAAHSDGH-HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHI 557
Query: 126 ASG-VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
A G S+AI +G L+ WG+ G+LG G + I P V L G K++ VS G G A
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDA 616
Query: 185 --LAQTEDGKLFGWG---YSADGRIGNLG----KALES-SPLD-------SNXXXXXXXX 227
LA TE+G+++ WG Y GR G+ G K +E LD S
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD 676
Query: 228 XXXXXXXXXKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLS 287
Q+L G E+ P + E ++G +V+D+A G H L L + + S
Sbjct: 677 GQVYTWGKGDNQRL-GHGTEEHVRYPKLLEG--LKGKKVIDVAAGSTHCLALTEDSEVHS 733
Query: 288 CGSNVYGQ----LGREKQDMGMFP-VDINFHPVSISSGLGHSLA 326
GSN Q L K + P +D H V I+ G S A
Sbjct: 734 WGSNDQCQHFDTLRITKPEPAALPGLDTK-HIVGIACGPAQSFA 776
Score = 194 (73.4 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 59/191 (30%), Positives = 91/191 (47%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-----VTSVSAGHYHSL 77
SA+G V S+G G G LG ++ EP + L V ++ G +S
Sbjct: 512 SANGE-VFSWGCGDGGRLGHGDTVP-----LEEPKLISALSGKQAGKHVVHIACGSTYSA 565
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC-AAFASGVVSS-AIG 135
A+T G ++ WGR N +LG G+ E + P V GL + V + SG + A+
Sbjct: 566 AITAEGELYTWGRGNYGRLGHGSSEDQTI---PMLVTGLKGLKVIDVSCGSGDAQTLAVT 622
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
++G +W WG G+LG G P +E L IVKV G ++A T+DG+++
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYT 681
Query: 196 WGYSADGRIGN 206
WG + R+G+
Sbjct: 682 WGKGDNQRLGH 692
Score = 192 (72.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 52/189 (27%), Positives = 94/189 (49%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVS--AGHYHSLAV 79
+A+G + ++G G G LG G D +P V L V ++ +G +L +
Sbjct: 4112 TAAGD-LFTWGKGRYGRLG-----HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T++ VW+WG + +LGRG + P +++ L + V S A+ G+
Sbjct: 4166 TDDDTVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLTDLGVVKVECGSQFSVALTKSGA 4222
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDG--KLFGWG 197
++ WGK +LG G D P +V+ L G+K++ ++ G H + TEDG +++ WG
Sbjct: 4223 VYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWG 4281
Query: 198 YSADGRIGN 206
+ +G++G+
Sbjct: 4282 DNDEGQLGD 4290
Score = 185 (70.2 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 56/187 (29%), Positives = 86/187 (45%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTN 81
S+ G V S+G+ G LG G P + L +V ++AG HS +T
Sbjct: 4060 SSEGE-VYSWGEAEDGKLG-----HGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA 4113
Query: 82 NGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC-AAFASGVVSS-AIGDDGS 139
G ++ WG+ +LG G E + PK VE L V A SG + + DD +
Sbjct: 4114 AGDLFTWGKGRYGRLGHGDSEDQLK---PKLVEALQGYRVIDIACGSGDAQTLCLTDDDT 4170
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+W WG G+LG G VP ++++L +VKV G ++A T+ G ++ WG
Sbjct: 4171 VWSWGDGDYGKLGRGGS-DGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKG 4229
Query: 200 ADGRIGN 206
R+G+
Sbjct: 4230 DYHRLGH 4236
Score = 182 (69.1 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 50/161 (31%), Positives = 73/161 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V S+GDG G LG G P + L V + G SLA+T +G VW
Sbjct: 3178 VFSWGDGDFGKLG-----RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3232
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG+ + +LG G + P+ VEGL + + A+ D G ++ WG +
Sbjct: 3233 WGKGDYFRLGHG---TDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT 188
GQ G G P+ V+ L G+KI +V+ G H++A T
Sbjct: 3290 HGQQGNGTTTVNR-KPTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 182 (69.1 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 57/163 (34%), Positives = 81/163 (49%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG G G D + P ++ L V V G S+A+T +GAV+
Sbjct: 4171 VWSWGDGDYGKLG-----RG-GSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVY 4224
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG--SLWVWG 144
WG+ + +LG G+ + P++V+GL V A + +DG ++ WG
Sbjct: 4225 TWGKGDYHRLGHGS-DDHV--RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWG 4281
Query: 145 KSKRGQLGLGKDITEAIV-PSRVEALAGEKIVKVSFGWGHALA 186
+ GQLG G T AI P V AL G+KI +V+ G H LA
Sbjct: 4282 DNDEGQLGDGT--TNAIQRPRLVAALQGKKINRVACGSAHTLA 4322
Score = 168 (64.2 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 76/253 (30%), Positives = 105/253 (41%)
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
G G+++ WG + RGQLG G + + VP+ EALA + V++ G A T DGKL+
Sbjct: 3954 GGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 4012
Query: 195 GWGYSADGRIGNLGKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGM-----EKE 249
GY A GR+G G S+P L SEG E E
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072
Query: 250 -------KYMPIIWEPFLVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
P P ++E G+EVVDIA G HS + G L + G YG+LG
Sbjct: 4073 DGKLGHGNRSPCD-RPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHG 4131
Query: 300 KQDMGMFP--VDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMG 357
+ + P V+ I G A + + T + SWG +LGR G
Sbjct: 4132 DSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDT-----VWSWGDGDYGKLGRGG 4186
Query: 358 PDN--VPLVVEGL 368
D VP+ ++ L
Sbjct: 4187 SDGCKVPMKIDSL 4199
Score = 167 (63.8 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 43/134 (32%), Positives = 67/134 (50%)
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDD 137
A T V+ WG N++ QLG G S+ P E L +NV A+ +
Sbjct: 2958 AATIRTKVFVWGLNDKDQLG-GLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFG 195
G ++ G++ G+LGLG +P ++ AL+ + KV+ G HA+A T DGK+F
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3074
Query: 196 WGYSADGRIGNLGK 209
WG DG++G+ +
Sbjct: 3075 WGEGDDGKLGHFSR 3088
Score = 164 (62.8 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 54/189 (28%), Positives = 89/189 (47%)
Query: 23 SASGTAVV-SFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAV 79
SA G+ + +G +G LG G+ G + PT L + + G AV
Sbjct: 3952 SAGGSGTIYGWGHNHRGQLG------GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV 4005
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--CAAFASGVVSSAIGDD 137
T +G ++A G +LG G ES +T P +E + V + A + G A+ +
Sbjct: 4006 TADGKLYATGYGAGGRLGIGGTESVST---PTLLESIQHVFIKKVAVNSGGKHCLALSSE 4062
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG+++ G+LG G + P +E+L G ++V ++ G H+ T G LF WG
Sbjct: 4063 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWG 4121
Query: 198 YSADGRIGN 206
GR+G+
Sbjct: 4122 KGRYGRLGH 4130
Score = 156 (60.0 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 45/153 (29%), Positives = 71/153 (46%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVC 122
+V V+ G AVT G V+A G +LG G S T P+++ L V
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI--SSGTVPIPRQITALSNYVVKKV 3054
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
A + G + A+ DG ++ WG+ G+LG + P +EAL ++I ++ G
Sbjct: 3055 AVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSS 3113
Query: 183 HALAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
H+ A T G+L+ WG GR+G+ + P
Sbjct: 3114 HSAAITSSGELYTWGLGEYGRLGHGDNTTQLKP 3146
Score = 146 (56.5 bits), Expect = 9.4e-08, Sum P(3) = 9.4e-08
Identities = 39/134 (29%), Positives = 67/134 (50%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+L+ +G ++ WG N+ QLG +E A P E L + A+
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLG--GIEG-AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWG--HALAQTEDGK 192
DG L+ G G+LG+G TE++ P+ +E++ I KV+ G H LA + +G+
Sbjct: 4007 ADGKLYATGYGAGGRLGIGG--TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4064
Query: 193 LFGWGYSADGRIGN 206
++ WG + DG++G+
Sbjct: 4065 VYSWGEAEDGKLGH 4078
Score = 124 (48.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 44/166 (26%), Positives = 77/166 (46%)
Query: 56 PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P + GL + V ++ L ++ NG V+ N++ LG ++S A+ N K
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSDT-LGPQLVQSLASRNIVK--- 498
Query: 115 GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEAL----A 170
AA + G A+ +G ++ WG G+LG G D P + AL A
Sbjct: 499 -------IAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG-DTVPLEEPKLISALSGKQA 550
Query: 171 GEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPL 216
G+ +V ++ G ++ A T +G+L+ WG GR+G+ ++ P+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596
Score = 107 (42.7 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 37/124 (29%), Positives = 56/124 (45%)
Query: 257 EPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH 313
+P L+E ++ + DIACG HS + +G L + G YG+LG +
Sbjct: 3093 KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQL-------K 3145
Query: 314 PVSISSGLGHSL--AICEVRSSNVTGGA-RGIV-SWGWNRSSQLGRMGPD--NVPLVVEG 367
P + LGH + C R + G+V SWG +LGR G + N+P +E
Sbjct: 3146 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3205
Query: 368 LEGE 371
L G+
Sbjct: 3206 LNGQ 3209
Score = 85 (35.0 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 35/118 (29%), Positives = 53/118 (44%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSG 320
+ G V I CG SL L ++GV+ + G Y +LG G D++ + G
Sbjct: 3206 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-----G---TDVHVRKPQVVEG 3257
Query: 321 L-GHSL---AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
L G + A+ + VT + + +WG N Q G G V P +V+GLEG+
Sbjct: 3258 LRGKKIVHVAVGALHCLAVTDTGQ-VYAWGDNDHGQQGN-GTTTVNRKPTLVQGLEGQ 3313
Score = 85 (35.0 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 35/117 (29%), Positives = 48/117 (41%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V ++G G LG G P + GL V V+AG H LA+T + V +
Sbjct: 679 VYTWGKGDNQRLG-----HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHS 733
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
WG N++ Q L R T +P + GLD ++ A G S S W G
Sbjct: 734 WGSNDQCQ-HFDTL--RITKPEPAALPGLDTKHI-VGIACGPAQSFAWSSCSEWSIG 786
Score = 79 (32.9 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 30/113 (26%), Positives = 48/113 (42%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVSISSGL 321
VV + CG S+ L ++G + + G Y +LG D P + ++I++G
Sbjct: 4204 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS 4263
Query: 322 GHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
H + E G + +WG N QLG G N P +V L+G+
Sbjct: 4264 LHCVCCTE-------DGLGEVYTWGDNDEGQLGD-GTTNAIQRPRLVAALQGK 4308
Score = 58 (25.5 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 32/120 (26%), Positives = 50/120 (41%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD------INF-- 312
+ + VV +A G + G + +CG G+LG G P+ N+
Sbjct: 2993 LSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISS-GTVPIPRQITALSNYVV 3051
Query: 313 HPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG---RMGPDNVPLVVEGLE 369
V++ SG H++A+ V G I SWG +LG RM D P ++E L+
Sbjct: 3052 KKVAVHSGGRHAMAL------TVDGK---IFSWGEGDDGKLGHFSRMNCDK-PRLIEALK 3101
Score = 50 (22.7 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 315 VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGR--MGPDNVPLVVEGLEG 370
V+++SG H LA+ SS G + SWG +LG P + P V+E L G
Sbjct: 4047 VAVNSGGKHCLAL----SSE---GE--VYSWGEAEDGKLGHGNRSPCDRPRVIESLRG 4095
Score = 43 (20.2 bits), Expect = 3.8e-15, Sum P(3) = 3.8e-15
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 274 DHSLVLGRNGVLLSCGSNVYGQLG 297
D +L G +G + G N GQLG
Sbjct: 3948 DWTLSAGGSGTIYGWGHNHRGQLG 3971
Score = 38 (18.4 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 141 WVWGKSKRGQLGLGKDITE 159
W WG GLG+ I E
Sbjct: 1881 WKWGDQDGPPPGLGRVIGE 1899
Score = 37 (18.1 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 243 SEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLG 280
SEG + Y P P + + V+ + G D L LG
Sbjct: 2186 SEGAVLDDYFPDTENPEVGGLMAVLAVIGGIDSRLRLG 2223
Score = 37 (18.1 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 261 VEGVEVVDIACGFDHSL 277
++G ++ +ACG H+L
Sbjct: 4305 LQGKKINRVACGSAHTL 4321
Score = 37 (18.1 bits), Expect = 9.4e-08, Sum P(3) = 9.4e-08
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 34 DGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSA 71
D GAL +P S+ P+ P PSD TS +
Sbjct: 3415 DAVVGAL-MPASMIA---PVECPSSSPAPPSDATSTGS 3448
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 231 (86.4 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 85/332 (25%), Positives = 148/332 (44%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT---SVSAGHYH 75
+F + G V + G+ + G LGL S G P ++ L + V +V +G H
Sbjct: 3008 LFAVTVEGK-VYACGEATNGRLGLGIS----SGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
++A+T +G +++WG ++ +LG SR + P+ +E L + S+AI
Sbjct: 3063 AMALTVDGKIFSWGEGDDGKLGHF---SRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3119
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKL 193
G L+ WG + G+LG G + T+ + P V+ L G ++++V+ G A LA T++G +
Sbjct: 3120 SSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 3178
Query: 194 FGWGYSADGRIGNLGKA-LESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGME----K 248
F WG DG G LG+ E + N + L G+ K
Sbjct: 3179 FSWG---DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3235
Query: 249 EKYMPI-------IWEPFLVEGV---EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
Y + + +P +VEG+ ++V +A G H L + G + + G N +GQ G
Sbjct: 3236 GDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3295
Query: 299 EKQDMGMFPV---DINFHPVS-ISSGLGHSLA 326
+ P + ++ ++ G HS+A
Sbjct: 3296 GTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 227 (85.0 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 61/178 (34%), Positives = 88/178 (49%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVS--AGHYHSLAV 79
+A G + ++G G+ G LG G D P V GL V VS +G +LAV
Sbjct: 568 TAEGE-LYTWGRGNYGRLG-----HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T NG VW+WG + +LGRG + T PK +E L +++ S A+ DG
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKT---PKLIEKLQDLDIVKVRCGSQFSIALTKDGQ 678
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
++ WGK +LG G + P +E L G+K++ V+ G H LA TED ++ WG
Sbjct: 679 VYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 216 (81.1 bits), Expect = 7.9e-17, Sum P(2) = 7.9e-17
Identities = 59/184 (32%), Positives = 93/184 (50%)
Query: 34 DGSQGALGLPTS-LTGVGG--DAYEPTRVPGLPS---DVTSVSAGHYHSLAVTNNGAVWA 87
DG A G G+GG PT + + +V++G H LA+++ G V++
Sbjct: 4008 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4067
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG + +LG G +R+ + P+ +E L + V A G S+ I G L+ WGK +
Sbjct: 4068 WGEAEDGKLGHG---NRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGR 4124
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKLFGWGYSADGRIG 205
G+LG G D + + P VEAL G +++ ++ G G A L T+D ++ WG DG G
Sbjct: 4125 YGRLGHG-DSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWG---DGDYG 4180
Query: 206 NLGK 209
LG+
Sbjct: 4181 KLGR 4184
Score = 196 (74.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 85/284 (29%), Positives = 121/284 (42%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
+ + S GH H LA++ NG V++WG + +LG G + G
Sbjct: 499 IAAHSDGH-HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHI 557
Query: 126 ASG-VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
A G S+AI +G L+ WG+ G+LG G + I P V L G K++ VS G G A
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDA 616
Query: 185 --LAQTEDGKLFGWG---YSADGRIGNLG----KALES-SPLD-------SNXXXXXXXX 227
LA TE+G+++ WG Y GR G+ G K +E LD S
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD 676
Query: 228 XXXXXXXXXKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLS 287
Q+L G E+ P + E ++G +V+D+A G H L L + + S
Sbjct: 677 GQVYTWGKGDNQRL-GHGTEEHVRYPKLLEG--LKGKKVIDVAAGSTHCLALTEDSEVHS 733
Query: 288 CGSNVYGQ----LGREKQDMGMFP-VDINFHPVSISSGLGHSLA 326
GSN Q L K + P +D H V I+ G S A
Sbjct: 734 WGSNDQCQHFDTLRITKPEPAALPGLDTK-HIVGIACGPAQSFA 776
Score = 194 (73.4 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 59/191 (30%), Positives = 91/191 (47%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-----VTSVSAGHYHSL 77
SA+G V S+G G G LG ++ EP + L V ++ G +S
Sbjct: 512 SANGE-VFSWGCGDGGRLGHGDTVP-----LEEPKLISALSGKQAGKHVVHIACGSTYSA 565
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC-AAFASGVVSS-AIG 135
A+T G ++ WGR N +LG G+ E + P V GL + V + SG + A+
Sbjct: 566 AITAEGELYTWGRGNYGRLGHGSSEDQTI---PMLVTGLKGLKVIDVSCGSGDAQTLAVT 622
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
++G +W WG G+LG G P +E L IVKV G ++A T+DG+++
Sbjct: 623 ENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYT 681
Query: 196 WGYSADGRIGN 206
WG + R+G+
Sbjct: 682 WGKGDNQRLGH 692
Score = 192 (72.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 52/189 (27%), Positives = 94/189 (49%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVS--AGHYHSLAV 79
+A+G + ++G G G LG G D +P V L V ++ +G +L +
Sbjct: 4112 TAAGD-LFTWGKGRYGRLG-----HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T++ VW+WG + +LGRG + P +++ L + V S A+ G+
Sbjct: 4166 TDDDTVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLTDLGVVKVECGSQFSVALTKSGA 4222
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDG--KLFGWG 197
++ WGK +LG G D P +V+ L G+K++ ++ G H + TEDG +++ WG
Sbjct: 4223 VYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWG 4281
Query: 198 YSADGRIGN 206
+ +G++G+
Sbjct: 4282 DNDEGQLGD 4290
Score = 185 (70.2 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 56/187 (29%), Positives = 86/187 (45%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTN 81
S+ G V S+G+ G LG G P + L +V ++AG HS +T
Sbjct: 4060 SSEGE-VYSWGEAEDGKLG-----HGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA 4113
Query: 82 NGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC-AAFASGVVSS-AIGDDGS 139
G ++ WG+ +LG G E + PK VE L V A SG + + DD +
Sbjct: 4114 AGDLFTWGKGRYGRLGHGDSEDQLK---PKLVEALQGYRVIDIACGSGDAQTLCLTDDDT 4170
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+W WG G+LG G VP ++++L +VKV G ++A T+ G ++ WG
Sbjct: 4171 VWSWGDGDYGKLGRGGS-DGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKG 4229
Query: 200 ADGRIGN 206
R+G+
Sbjct: 4230 DYHRLGH 4236
Score = 182 (69.1 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 50/161 (31%), Positives = 73/161 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V S+GDG G LG G P + L V + G SLA+T +G VW
Sbjct: 3178 VFSWGDGDFGKLG-----RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3232
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG+ + +LG G + P+ VEGL + + A+ D G ++ WG +
Sbjct: 3233 WGKGDYFRLGHG---TDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT 188
GQ G G P+ V+ L G+KI +V+ G H++A T
Sbjct: 3290 HGQQGNGTTTVNR-KPTLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 182 (69.1 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 57/163 (34%), Positives = 81/163 (49%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG G G D + P ++ L V V G S+A+T +GAV+
Sbjct: 4171 VWSWGDGDYGKLG-----RG-GSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVY 4224
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG--SLWVWG 144
WG+ + +LG G+ + P++V+GL V A + +DG ++ WG
Sbjct: 4225 TWGKGDYHRLGHGS-DDHV--RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWG 4281
Query: 145 KSKRGQLGLGKDITEAIV-PSRVEALAGEKIVKVSFGWGHALA 186
+ GQLG G T AI P V AL G+KI +V+ G H LA
Sbjct: 4282 DNDEGQLGDGT--TNAIQRPRLVAALQGKKINRVACGSAHTLA 4322
Score = 168 (64.2 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 76/253 (30%), Positives = 105/253 (41%)
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
G G+++ WG + RGQLG G + + VP+ EALA + V++ G A T DGKL+
Sbjct: 3954 GGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 4012
Query: 195 GWGYSADGRIGNLGKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGM-----EKE 249
GY A GR+G G S+P L SEG E E
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072
Query: 250 -------KYMPIIWEPFLVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
P P ++E G+EVVDIA G HS + G L + G YG+LG
Sbjct: 4073 DGKLGHGNRSPCD-RPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHG 4131
Query: 300 KQDMGMFP--VDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMG 357
+ + P V+ I G A + + T + SWG +LGR G
Sbjct: 4132 DSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDT-----VWSWGDGDYGKLGRGG 4186
Query: 358 PDN--VPLVVEGL 368
D VP+ ++ L
Sbjct: 4187 SDGCKVPMKIDSL 4199
Score = 167 (63.8 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 43/134 (32%), Positives = 67/134 (50%)
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDD 137
A T V+ WG N++ QLG G S+ P E L +NV A+ +
Sbjct: 2958 AATIRTKVFVWGLNDKDQLG-GLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFG 195
G ++ G++ G+LGLG +P ++ AL+ + KV+ G HA+A T DGK+F
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3074
Query: 196 WGYSADGRIGNLGK 209
WG DG++G+ +
Sbjct: 3075 WGEGDDGKLGHFSR 3088
Score = 164 (62.8 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 54/189 (28%), Positives = 89/189 (47%)
Query: 23 SASGTAVV-SFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAV 79
SA G+ + +G +G LG G+ G + PT L + + G AV
Sbjct: 3952 SAGGSGTIYGWGHNHRGQLG------GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV 4005
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--CAAFASGVVSSAIGDD 137
T +G ++A G +LG G ES +T P +E + V + A + G A+ +
Sbjct: 4006 TADGKLYATGYGAGGRLGIGGTESVST---PTLLESIQHVFIKKVAVNSGGKHCLALSSE 4062
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG+++ G+LG G + P +E+L G ++V ++ G H+ T G LF WG
Sbjct: 4063 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWG 4121
Query: 198 YSADGRIGN 206
GR+G+
Sbjct: 4122 KGRYGRLGH 4130
Score = 156 (60.0 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 45/153 (29%), Positives = 71/153 (46%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVC 122
+V V+ G AVT G V+A G +LG G S T P+++ L V
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI--SSGTVPIPRQITALSNYVVKKV 3054
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
A + G + A+ DG ++ WG+ G+LG + P +EAL ++I ++ G
Sbjct: 3055 AVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSS 3113
Query: 183 HALAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
H+ A T G+L+ WG GR+G+ + P
Sbjct: 3114 HSAAITSSGELYTWGLGEYGRLGHGDNTTQLKP 3146
Score = 146 (56.5 bits), Expect = 9.4e-08, Sum P(3) = 9.4e-08
Identities = 39/134 (29%), Positives = 67/134 (50%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+L+ +G ++ WG N+ QLG +E A P E L + A+
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLG--GIEG-AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWG--HALAQTEDGK 192
DG L+ G G+LG+G TE++ P+ +E++ I KV+ G H LA + +G+
Sbjct: 4007 ADGKLYATGYGAGGRLGIGG--TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4064
Query: 193 LFGWGYSADGRIGN 206
++ WG + DG++G+
Sbjct: 4065 VYSWGEAEDGKLGH 4078
Score = 124 (48.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 44/166 (26%), Positives = 77/166 (46%)
Query: 56 PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P + GL + V ++ L ++ NG V+ N++ LG ++S A+ N K
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSDT-LGPQLVQSLASRNIVK--- 498
Query: 115 GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEAL----A 170
AA + G A+ +G ++ WG G+LG G D P + AL A
Sbjct: 499 -------IAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG-DTVPLEEPKLISALSGKQA 550
Query: 171 GEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPL 216
G+ +V ++ G ++ A T +G+L+ WG GR+G+ ++ P+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596
Score = 107 (42.7 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 37/124 (29%), Positives = 56/124 (45%)
Query: 257 EPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH 313
+P L+E ++ + DIACG HS + +G L + G YG+LG +
Sbjct: 3093 KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQL-------K 3145
Query: 314 PVSISSGLGHSL--AICEVRSSNVTGGA-RGIV-SWGWNRSSQLGRMGPD--NVPLVVEG 367
P + LGH + C R + G+V SWG +LGR G + N+P +E
Sbjct: 3146 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3205
Query: 368 LEGE 371
L G+
Sbjct: 3206 LNGQ 3209
Score = 85 (35.0 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 35/118 (29%), Positives = 53/118 (44%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSG 320
+ G V I CG SL L ++GV+ + G Y +LG G D++ + G
Sbjct: 3206 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH-----G---TDVHVRKPQVVEG 3257
Query: 321 L-GHSL---AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
L G + A+ + VT + + +WG N Q G G V P +V+GLEG+
Sbjct: 3258 LRGKKIVHVAVGALHCLAVTDTGQ-VYAWGDNDHGQQGN-GTTTVNRKPTLVQGLEGQ 3313
Score = 85 (35.0 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 35/117 (29%), Positives = 48/117 (41%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V ++G G LG G P + GL V V+AG H LA+T + V +
Sbjct: 679 VYTWGKGDNQRLG-----HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHS 733
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
WG N++ Q L R T +P + GLD ++ A G S S W G
Sbjct: 734 WGSNDQCQ-HFDTL--RITKPEPAALPGLDTKHI-VGIACGPAQSFAWSSCSEWSIG 786
Score = 79 (32.9 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 30/113 (26%), Positives = 48/113 (42%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVSISSGL 321
VV + CG S+ L ++G + + G Y +LG D P + ++I++G
Sbjct: 4204 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS 4263
Query: 322 GHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
H + E G + +WG N QLG G N P +V L+G+
Sbjct: 4264 LHCVCCTE-------DGLGEVYTWGDNDEGQLGD-GTTNAIQRPRLVAALQGK 4308
Score = 58 (25.5 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 32/120 (26%), Positives = 50/120 (41%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD------INF-- 312
+ + VV +A G + G + +CG G+LG G P+ N+
Sbjct: 2993 LSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISS-GTVPIPRQITALSNYVV 3051
Query: 313 HPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG---RMGPDNVPLVVEGLE 369
V++ SG H++A+ V G I SWG +LG RM D P ++E L+
Sbjct: 3052 KKVAVHSGGRHAMAL------TVDGK---IFSWGEGDDGKLGHFSRMNCDK-PRLIEALK 3101
Score = 50 (22.7 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 315 VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGR--MGPDNVPLVVEGLEG 370
V+++SG H LA+ SS G + SWG +LG P + P V+E L G
Sbjct: 4047 VAVNSGGKHCLAL----SSE---GE--VYSWGEAEDGKLGHGNRSPCDRPRVIESLRG 4095
Score = 43 (20.2 bits), Expect = 3.8e-15, Sum P(3) = 3.8e-15
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 274 DHSLVLGRNGVLLSCGSNVYGQLG 297
D +L G +G + G N GQLG
Sbjct: 3948 DWTLSAGGSGTIYGWGHNHRGQLG 3971
Score = 38 (18.4 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 141 WVWGKSKRGQLGLGKDITE 159
W WG GLG+ I E
Sbjct: 1881 WKWGDQDGPPPGLGRVIGE 1899
Score = 37 (18.1 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 243 SEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLG 280
SEG + Y P P + + V+ + G D L LG
Sbjct: 2186 SEGAVLDDYFPDTENPEVGGLMAVLAVIGGIDSRLRLG 2223
Score = 37 (18.1 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 261 VEGVEVVDIACGFDHSL 277
++G ++ +ACG H+L
Sbjct: 4305 LQGKKINRVACGSAHTL 4321
Score = 37 (18.1 bits), Expect = 9.4e-08, Sum P(3) = 9.4e-08
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 34 DGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSA 71
D GAL +P S+ P+ P PSD TS +
Sbjct: 3415 DAVVGAL-MPASMIA---PVECPSSSPAPPSDATSTGS 3448
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 227 (85.0 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 59/185 (31%), Positives = 94/185 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V+S G + G LG+P + G P ++ L ++AG H+LA T +G V+ W
Sbjct: 103 VLSCGSNAFGQLGVPQ----ISGPCLIPQKIKSLKEKAVGIAAGLRHALAATESGLVFQW 158
Query: 89 G-----RNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AIGDDGSLWV 142
G R V G+ L +P ++G V +C S ++S + +G L+V
Sbjct: 159 GTGMASRAKRVHQGK-TLPVFWAAKEPCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYV 217
Query: 143 WGKSKRGQLGLGKDITEAIVPSRVEA--LAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
WG +K GQL + K++ + P +++ + EKI V GW H +AQTE GK+F WG +
Sbjct: 218 WGSNKHGQL-VSKEVF-LVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFTWGRAD 275
Query: 201 DGRIG 205
G++G
Sbjct: 276 YGQLG 280
Score = 146 (56.5 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 51/184 (27%), Positives = 79/184 (42%)
Query: 33 GDGSQGALGLPTSLTGVGGDAYEPTRVPGLP---SDVTSVSAGHYHSLAVTNNGAVWAWG 89
G S G LGL G D P + + D+ S++ G HS +T G ++ G
Sbjct: 1 GANSYGQLGL-----GHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCG 55
Query: 90 RNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRG 149
N QLG E + + G V + ++ +G G + G + G
Sbjct: 56 HNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVACGWDFTII---LGRAGLVLSCGSNAFG 112
Query: 150 QLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNL-- 207
QLG+ + ++P ++++L EK V ++ G HALA TE G +F WG R +
Sbjct: 113 QLGVPQISGPCLIPQKIKSLK-EKAVGIAAGLRHALAATESGLVFQWGTGMASRAKRVHQ 171
Query: 208 GKAL 211
GK L
Sbjct: 172 GKTL 175
Score = 133 (51.9 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMG--MFPVDINF---HPV 315
+ G V ++ACG+D +++LGR G++LSCGSN +GQLG Q G + P I V
Sbjct: 79 LSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLG-VPQISGPCLIPQKIKSLKEKAV 137
Query: 316 SISSGLGHSLAICE 329
I++GL H+LA E
Sbjct: 138 GIAAGLRHALAATE 151
Score = 73 (30.8 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 269 IACGFDHSL-VLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVSISSGLGH 323
IACG +H+L V+G LS G N +G G + P + + I G GH
Sbjct: 319 IACGSEHNLAVVG--DCCLSWGWNEHGMCGDGTEANVHVPKPVKALGYAKQILIGCGAGH 376
Query: 324 SLAICE 329
SLA+C+
Sbjct: 377 SLALCQ 382
Score = 53 (23.7 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 27/110 (24%), Positives = 44/110 (40%)
Query: 272 GFDHSLVLGRNGVLLSCGSNVYGQLGREKQDM---GMFPVDINF-----HPVSISSGLGH 323
G+ H + G + + G YGQLGR + +D +F P + +G H
Sbjct: 255 GWTHLVAQTETGKVFTWGRADYGQLGRHAAVYVADRVIKLD-SFLPCCPQPEAEKNG-NH 312
Query: 324 SLAICEVRSS---NVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGL 368
++ + ++ N+ +SWGWN G NV P V+ L
Sbjct: 313 TILLFQIACGSEHNLAVVGDCCLSWGWNEHGMCGDGTEANVHVPKPVKAL 362
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 235 (87.8 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 83/299 (27%), Positives = 137/299 (45%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT---SVSAGHYH 75
+F +A G V + G+ + G LGL S G P ++ L + V +V +G H
Sbjct: 3000 LFAVTAEGK-VYACGEATNGRLGLGLS----SGTIPIPRQISALSNYVVKKVAVHSGGRH 3054
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
++A+T +G V++WG ++ +LG SR + P+ +E L + S+AI
Sbjct: 3055 AMALTVDGKVFSWGEGDDGKLGHF---SRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3111
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKL 193
G L+ WG + G+LG G + T+ + P V+ L G ++V+V+ G A LA T++G +
Sbjct: 3112 SSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMV 3170
Query: 194 FGWGYSADGRIGNLGKA-LESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGME----K 248
F WG DG G LG+ E + N + L G+ K
Sbjct: 3171 FSWG---DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3227
Query: 249 EKYMPI-------IWEPFLVEGV---EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
Y + + +P +VEG+ ++V +A G H L + G + + G N +GQ G
Sbjct: 3228 GDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQG 3286
Score = 226 (84.6 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 66/187 (35%), Positives = 93/187 (49%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHY--HSLAV 79
++SG + S+G G G LG + T + P V L V V+ G +LA+
Sbjct: 3111 TSSGE-LYSWGLGEYGRLGHGDNTTQL-----RPKLVKVLLGHRVVQVACGSRDAQTLAL 3164
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T+ G V++WG + +LGRG E N P+ +E L+ VC S A+ G
Sbjct: 3165 TDEGMVFSWGDGDFGKLGRGGSEG---CNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3221
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+W WGK +LG G D+ P VE L G+KIV V+ G H LA TE G++F WG +
Sbjct: 3222 VWTWGKGDYFRLGHGTDV-HVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDN 3280
Query: 200 ADGRIGN 206
G+ GN
Sbjct: 3281 DHGQQGN 3287
Score = 225 (84.3 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 56/170 (32%), Positives = 85/170 (50%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEP---TRVPGLPSDVTSVSAGHYHSLAVTNNGAVWA 87
++G G+ G LG G D P T + GL + +G +LAVT NG VW+
Sbjct: 564 TWGRGNYGRLG-----HGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTENGQVWS 618
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG + +LGRG + T PK VE L +++ S A+ DG ++ WGK
Sbjct: 619 WGDGDYGKLGRGGSDGCKT---PKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGD 675
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
+LG G D P +++L G+++V ++ G H LA TE+G++ WG
Sbjct: 676 NQRLGHGTD-EHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWG 724
Score = 220 (82.5 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 80/286 (27%), Positives = 128/286 (44%)
Query: 34 DGSQGALGLPTS-LTGVGG--DAYEPTRVPGLPSDV---TSVSAGHYHSLAVTNNGAVWA 87
DG A G G+GG PT + + +V++G H LA+++ G +++
Sbjct: 4001 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYS 4060
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG + +LG G +R+ + P+ +E L V V A G S+ I G L+ WGK +
Sbjct: 4061 WGEAEDGKLGHG---NRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGR 4117
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKLFGWGYSADGRIG 205
G+LG G D + + P VEAL G +++ V+ G G A L T+D ++ WG G++G
Sbjct: 4118 YGRLGHG-DSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG 4176
Query: 206 NLGKALESSPL--DS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPI------- 254
G P+ DS K+ + + G K Y +
Sbjct: 4177 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDH 4234
Query: 255 IWEPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+ P V+G++ V+ IA G H + +G + + G N GQLG
Sbjct: 4235 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4280
Score = 207 (77.9 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 84/317 (26%), Positives = 143/317 (45%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+L+ +G ++ WG N+ QLG +E A P E L + A+
Sbjct: 3943 TLSAGGSGTIYGWGHNHRGQLG--GIEG-AKVKVPTPTEALATLRPVQLIGGEQTLFAVT 3999
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWG--HALAQTEDGK 192
DG L+ G G+LG+G TE++ P+ +E++ I KV+ G H LA + +G+
Sbjct: 4000 ADGKLYATGYGAGGRLGIGG--TESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGE 4057
Query: 193 LFGWGYSADGRIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEK 248
L+ WG + DG++G+ ++ P ++S + +L + G K
Sbjct: 4058 LYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWG--K 4115
Query: 249 EKYMPI-------IWEPFLVEGVE---VVDIACGFD--HSLVLGRNGVLLSCGSNVYGQL 296
+Y + +P LVE ++ V+D+ACG +L L + ++ S G YG+L
Sbjct: 4116 GRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKL 4175
Query: 297 GREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM 356
GR D P+ I+ S++ GLG C + S + + +WG +LG
Sbjct: 4176 GRGGSDGCKVPMKID----SLT-GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4230
Query: 357 GPDNV--PLVVEGLEGE 371
D+V P V+GL+G+
Sbjct: 4231 SDDHVRRPRQVQGLQGK 4247
Score = 205 (77.2 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 54/187 (28%), Positives = 94/187 (50%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVS--AGHYHSLAV 79
+ASG + ++G G G LG G D +P V L V V+ +G +L +
Sbjct: 4105 TASGE-LYTWGKGRYGRLG-----HGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCL 4158
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T++ VW+WG + +LGRG + P +++ L + V S A+ G+
Sbjct: 4159 TDDDMVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLTGLGVVKVECGSQFSVALTKSGA 4215
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
++ WGK +LG G D P +V+ L G+K++ ++ G H + TEDG+++ WG +
Sbjct: 4216 VYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4274
Query: 200 ADGRIGN 206
+G++G+
Sbjct: 4275 DEGQLGD 4281
Score = 202 (76.2 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 63/192 (32%), Positives = 94/192 (48%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAY--EPTRVP---GLP--SDVTSVSAGHYH 75
S +G V S+G G G LG G Y EPT + G P V ++ G +
Sbjct: 501 SVNGE-VFSWGCGDGGRLGH-------GDTTYLEEPTMISVFSGRPVGKQVVHIACGSTY 552
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AI 134
S A+T +G + WGR N +LG G+ E + T ++GL ++V A SG + A+
Sbjct: 553 SAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDV--ACGSGDAQTLAV 610
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
++G +W WG G+LG G P VE L IVKV G ++A T+DG+++
Sbjct: 611 TENGQVWSWGDGDYGKLGRGGS-DGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVY 669
Query: 195 GWGYSADGRIGN 206
WG + R+G+
Sbjct: 670 TWGKGDNQRLGH 681
Score = 193 (73.0 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 57/161 (35%), Positives = 81/161 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG G G D + P ++ L V V G S+A+T +GAV+
Sbjct: 4164 VWSWGDGDYGKLG-----RG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 4217
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG+ + +LG G+ + P++V+GL V A + +DG ++ WG +
Sbjct: 4218 TWGKGDYHRLGHGS-DDHV--RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4274
Query: 147 KRGQLGLGKDITEAIV-PSRVEALAGEKIVKVSFGWGHALA 186
GQLG G T AI P V AL G+KI +V+ G H LA
Sbjct: 4275 DEGQLGDGT--TNAIQRPRLVAALQGKKINRVACGSAHTLA 4313
Score = 190 (71.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 84/277 (30%), Positives = 118/277 (42%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGA---LESRATWND-PKRVEGLDQVNVCAAFASGVV 130
H LA++ NG V++WG + +LG G LE + R G V++
Sbjct: 496 HYLALSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACG---STY 552
Query: 131 SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQT 188
S+AI DG L WG+ G+LG G + P V AL G K++ V+ G G A LA T
Sbjct: 553 SAAITADGELHTWGRGNYGRLGHGSS-EDQTTPMLVTALKGLKVIDVACGSGDAQTLAVT 611
Query: 189 EDGKLFGWG---YSADGRIGNLG----KALES-SPLD-------SNXXXXXXXXXXXXXX 233
E+G+++ WG Y GR G+ G K +E LD S
Sbjct: 612 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTW 671
Query: 234 XXXKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNV- 292
Q+L G ++ P + + ++G VVDIA G H L L G + S GSN
Sbjct: 672 GKGDNQRL-GHGTDEHVRYPKLLDS--LQGKRVVDIAVGSTHCLALTEEGEVHSWGSNDK 728
Query: 293 ---YGQLGREKQDMGMFPVDINFHPVSISSGLGHSLA 326
+ L K+ P + H V IS G G S +
Sbjct: 729 LQHFDTLFSNKKQPKALPGLNSKHIVGISCGPGQSFS 765
Score = 179 (68.1 bits), Expect = 8.2e-12, Sum P(3) = 8.2e-12
Identities = 49/161 (30%), Positives = 73/161 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V S+GDG G LG G P + L V + G SLA+T +G VW
Sbjct: 3170 VFSWGDGDFGKLG-----RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3224
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG+ + +LG G + P+ VEGL + + A+ + G ++ WG +
Sbjct: 3225 WGKGDYFRLGHG---TDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDND 3281
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT 188
GQ G G P+ V+ L G+KI +V+ G H++A T
Sbjct: 3282 HGQQGNGTTTVNR-KPTLVQGLEGQKITRVACGSSHSVAWT 3321
Score = 171 (65.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 53/187 (28%), Positives = 87/187 (46%)
Query: 23 SASGTAVV-SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTN 81
SA G+ + +G +G LG + G PT V + G AVT
Sbjct: 3945 SAGGSGTIYGWGHNHRGQLG---GIEGAKVKVPTPTEALATLRPVQLIG-GEQTLFAVTA 4000
Query: 82 NGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--CAAFASGVVSSAIGDDGS 139
+G ++A G +LG G ES +T P +E + V + A + G A+ +G
Sbjct: 4001 DGKLYATGYGAGGRLGIGGTESVST---PTLLESIQHVFIRKVAVNSGGKHCLALSSEGE 4057
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
L+ WG+++ G+LG G + P +E+L G ++V ++ G H+ T G+L+ WG
Sbjct: 4058 LYSWGEAEDGKLGHGNR-SPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKG 4116
Query: 200 ADGRIGN 206
GR+G+
Sbjct: 4117 RYGRLGH 4123
Score = 168 (64.2 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 43/134 (32%), Positives = 67/134 (50%)
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDD 137
A T V+ WG N++ QLG G S+ P E L +NV A+ +
Sbjct: 2950 AATIRTKVFVWGLNDKDQLG-GLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTAE 3006
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFG 195
G ++ G++ G+LGLG +P ++ AL+ + KV+ G HA+A T DGK+F
Sbjct: 3007 GKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3066
Query: 196 WGYSADGRIGNLGK 209
WG DG++G+ +
Sbjct: 3067 WGEGDDGKLGHFSR 3080
Score = 158 (60.7 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 44/144 (30%), Positives = 69/144 (47%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVC 122
+V V+ G AVT G V+A G +LG G S T P+++ L V
Sbjct: 2989 NVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGL--SSGTIPIPRQISALSNYVVKKV 3046
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
A + G + A+ DG ++ WG+ G+LG + P +EAL ++I ++ G
Sbjct: 3047 AVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSS 3105
Query: 183 HALAQTEDGKLFGWGYSADGRIGN 206
H+ A T G+L+ WG GR+G+
Sbjct: 3106 HSAAITSSGELYSWGLGEYGRLGH 3129
Score = 109 (43.4 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 38/124 (30%), Positives = 56/124 (45%)
Query: 257 EPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH 313
+P L+E ++ + DIACG HS + +G L S G YG+LG +
Sbjct: 3085 KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQL-------R 3137
Query: 314 PVSISSGLGHSLA--ICEVRSSNVTGGA-RGIV-SWGWNRSSQLGRMGPD--NVPLVVEG 367
P + LGH + C R + G+V SWG +LGR G + N+P +E
Sbjct: 3138 PKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIER 3197
Query: 368 LEGE 371
L G+
Sbjct: 3198 LNGQ 3201
Score = 105 (42.0 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 28/98 (28%), Positives = 50/98 (51%)
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAG----EKIVKVS 178
AA G A+ +G ++ WG G+LG G D T P+ + +G +++V ++
Sbjct: 489 AAHPDGQHYLALSVNGEVFSWGCGDGGRLGHG-DTTYLEEPTMISVFSGRPVGKQVVHIA 547
Query: 179 FGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPL 216
G ++ A T DG+L WG GR+G+ +++P+
Sbjct: 548 CGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPM 585
Score = 83 (34.3 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 36/118 (30%), Positives = 51/118 (43%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVS 316
+ G V I CG SL L ++GV+ + G Y +LG P + V
Sbjct: 3198 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVH 3257
Query: 317 ISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
++ G H LA+ E TG + +WG N Q G G V P +V+GLEG+
Sbjct: 3258 VAVGALHCLAVTE------TGQ---VFAWGDNDHGQQGN-GTTTVNRKPTLVQGLEGQ 3305
Score = 79 (32.9 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 31/116 (26%), Positives = 49/116 (42%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVSIS 318
G+ VV + CG S+ L ++G + + G Y +LG D P + ++I+
Sbjct: 4194 GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4253
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
+G H +C V +WG N QLG G N P +V L+G+
Sbjct: 4254 TGSLH--CVCCTEDGEV-------YTWGDNDEGQLGD-GTTNAIQRPRLVAALQGK 4299
Score = 61 (26.5 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 31/120 (25%), Positives = 50/120 (41%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD------INF-- 312
+ + VV +A G + G + +CG G+LG G P+ N+
Sbjct: 2985 LSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSS-GTIPIPRQISALSNYVV 3043
Query: 313 HPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG---RMGPDNVPLVVEGLE 369
V++ SG H++A+ V G + SWG +LG RM D P ++E L+
Sbjct: 3044 KKVAVHSGGRHAMAL------TVDGK---VFSWGEGDDGKLGHFSRMNCDK-PRLIEALK 3093
Score = 49 (22.3 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 257 EPFLVEGVE---VVDIACGFDHSL 277
+P LV+G+E + +ACG HS+
Sbjct: 3295 KPTLVQGLEGQKITRVACGSSHSV 3318
Score = 43 (20.2 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 274 DHSLVLGRNGVLLSCGSNVYGQLG 297
D +L G +G + G N GQLG
Sbjct: 3941 DWTLSAGGSGTIYGWGHNHRGQLG 3964
Score = 40 (19.1 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 188 TEDGKLFGWGY 198
T DG + GWG+
Sbjct: 3690 TSDGSVNGWGW 3700
Score = 38 (18.4 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 67 TSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGAL 101
T+ S+ H HS+ +W WGR E R L
Sbjct: 82 TAASSFH-HSII-----EMWDWGRQPETSELRDCL 110
Score = 37 (18.1 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 261 VEGVEVVDIACGFDHSL 277
++G ++ +ACG H+L
Sbjct: 4296 LQGKKINRVACGSAHTL 4312
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 216 (81.1 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 58/195 (29%), Positives = 89/195 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V++ G + G LG+ T + EP + VTSV+AG H+LA T +G V+ W
Sbjct: 144 VLACGSNAFGQLGVSAEKT----HSAEPLLLKSFHEPVTSVAAGLRHALASTASGCVYQW 199
Query: 89 GR----NNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
G + + L + S + +P V G V A + + +G L++WG
Sbjct: 200 GTGLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWG 259
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
+K GQL G V L E++ V GW H +AQTE G++F WG S G++
Sbjct: 260 SNKHGQLISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQL 319
Query: 205 GNLGKALESSPLDSN 219
G ++E D +
Sbjct: 320 GQTNHSMEKQSCDEH 334
Score = 174 (66.3 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 48/135 (35%), Positives = 73/135 (54%)
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVE-GLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
++ WG N+ QLG+G E +A +P+RVE GL + + A G S+ I D G L V
Sbjct: 39 LYTWGANSYGQLGQGNAEDQA---EPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVC 95
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEALAG-EKIVKVSFGWGHALAQTEDGKLFGWGYSADG 202
G++ +GQLGLG T I+ + L G ++ +VS GW + T DG + G +A G
Sbjct: 96 GQNHKGQLGLGH--TLEIMTFQTCPLPGFGRVQQVSCGWDFTIILTGDGLVLACGSNAFG 153
Query: 203 RIG-NLGKALESSPL 216
++G + K + PL
Sbjct: 154 QLGVSAEKTHSAEPL 168
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 48/159 (30%), Positives = 74/159 (46%)
Query: 55 EPTRVPGLPSDVTS-VSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRV 113
EP VPG T V AG H +T NG ++ WG N QL G+L + +
Sbjct: 224 EPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQLISGSLFLPLPVALDRSM 283
Query: 114 EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLG-----LGKD-ITEAIVPSRVE 167
++V+ + + +V+ + G ++ WG+S GQLG + K E +V S VE
Sbjct: 284 LQDERVSDVHSGWTHLVAQT--ESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLVRSPVE 341
Query: 168 ALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
A ++S G H LA G++F WG++ G G+
Sbjct: 342 VKALFGATQISCGSEHNLAVV-GGRVFSWGWNEHGMCGD 379
Score = 132 (51.5 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 37/102 (36%), Positives = 59/102 (57%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG-REKQDMGMFPVDI-NFH-PV-SISSGL 321
V ++CG+D +++L +G++L+CGSN +GQLG ++ P+ + +FH PV S+++GL
Sbjct: 125 VQQVSCGWDFTIILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLLLKSFHEPVTSVAAGL 184
Query: 322 GHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM-GPDNVP 362
H+LA S +G + WG SS RM P VP
Sbjct: 185 RHALA------STASGC---VYQWGTGLSSHAKRMLNPQPVP 217
Score = 117 (46.2 bits), Expect = 0.00046, P = 0.00046
Identities = 40/130 (30%), Positives = 65/130 (50%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRG--ALESRATWNDPKRVEGLDQVNVCA 123
V+ V +G H +A T +G V+ WGR+N QLG+ ++E ++ D V V V A
Sbjct: 289 VSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSC--DEHLVRS--PVEVKA 344
Query: 124 AFASGVVSSAIGDD-----GSLWVWGKSKRGQLGLG--KDITEAIVPSRVEALAGEKIVK 176
F + +S + G ++ WG ++ G G G +DIT+ P + ALA +
Sbjct: 345 LFGATQISCGSEHNLAVVGGRVFSWGWNEHGMCGDGSLQDITQ---PQPIPALADAVALL 401
Query: 177 VSFGWGHALA 186
+ G GH++A
Sbjct: 402 IGCGAGHSMA 411
Score = 107 (42.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 50/190 (26%), Positives = 82/190 (43%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNN 82
S SG +V G +G LGL +L + ++ +PG V VS G ++ +T +
Sbjct: 87 SDSGELLVC-GQNHKGQLGLGHTLEIM---TFQTCPLPGF-GRVQQVSCGWDFTIILTGD 141
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVCAAFASGVVSSAIGDDGSL 140
G V A G N QLG A ++ + +P ++ + +V A + S+A G +
Sbjct: 142 GLVLACGSNAFGQLGVSAEKTHSA--EPLLLKSFHEPVTSVAAGLRHALASTA---SGCV 196
Query: 141 WVWGK--SKRGQLGLGKDITEAIVPSR----VEALAGEKIVKVSFGWGHALAQTEDGKLF 194
+ WG S + L + + S+ V A KV G H T +G+LF
Sbjct: 197 YQWGTGLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELF 256
Query: 195 GWGYSADGRI 204
WG + G++
Sbjct: 257 LWGSNKHGQL 266
Score = 106 (42.4 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 26/105 (24%), Positives = 46/105 (43%)
Query: 252 MPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN 311
+P+ + +++ V D+ G+ H + +G + + G + YGQLG+ M D +
Sbjct: 275 LPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDEH 334
Query: 312 F--HPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
PV + + G + C + G R + SWGWN G
Sbjct: 335 LVRSPVEVKALFGATQISCGSEHNLAVVGGR-VFSWGWNEHGMCG 378
Score = 87 (35.7 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 31/98 (31%), Positives = 50/98 (51%)
Query: 243 SEGMEKEKYMP-IIWEPFLVEGV-EVVDIACGFDHSL-VLGRNGVLLSCGSNVYGQLGRE 299
+ MEK+ ++ P V+ + I+CG +H+L V+G G + S G N +G G
Sbjct: 323 NHSMEKQSCDEHLVRSPVEVKALFGATQISCGSEHNLAVVG--GRVFSWGWNEHGMCGDG 380
Query: 300 K-QDMGM-FPVDINFHPVS--ISSGLGHSLAICEVRSS 333
QD+ P+ V+ I G GHS+A+C ++SS
Sbjct: 381 SLQDITQPQPIPALADAVALLIGCGAGHSMALCSLKSS 418
Score = 59 (25.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 18/43 (41%), Positives = 20/43 (46%)
Query: 257 EPFLVEG---VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQL 296
EP LV G V + G H L NG L GSN +GQL
Sbjct: 224 EPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQL 266
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 256 (95.2 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 56/152 (36%), Positives = 92/152 (60%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V V+ G +HS+A++ +G ++AWG NN Q+G G+ ++ T P+RV Q +
Sbjct: 130 VIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPT---PRRVSNCLQDKMVVGI 186
Query: 126 ASGVVSS-AIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
A G SS A+ ++G ++ WG + GQLGLG + + + P RV AL G I++++ G+ H
Sbjct: 187 ACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAALHGVCILQIACGYAHT 245
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGKALESSPL 216
LA T++G L+ WG + G++G K+ + SPL
Sbjct: 246 LALTDEGLLYAWGANTYGQLGTGNKSNQLSPL 277
Score = 190 (71.9 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 58/184 (31%), Positives = 85/184 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGL-PSDVTSVSAGHY-HSLAVTNNGAVW 86
V FG LG TG P ++ L ++S+S G H L T +G V+
Sbjct: 43 VFVFGLNCSNCLG-----TGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVY 97
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRV-EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGK 145
AWG N QLG GA T P +V L V S A+ DG L+ WG
Sbjct: 98 AWGHNGYSQLGNGATNQGVT---PVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGY 154
Query: 146 SKRGQLGLGKDITEAIVPSRVE-ALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
+ GQ+G G + P RV L + +V ++ G ++A +G+++GWGY+ +G++
Sbjct: 155 NNCGQVGSGSTANQP-TPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQL 213
Query: 205 GNLG 208
G LG
Sbjct: 214 G-LG 216
Score = 182 (69.1 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 60/195 (30%), Positives = 95/195 (48%)
Query: 13 NVLTSRIFMRSASGT---AVVSFGDGSQGALGLPT-SLTGVGGDAYEPT--RVPGLPSD- 65
N+L ++ + A G+ +SF DG A G G G A +PT RV D
Sbjct: 124 NLLLKKV-IEVACGSHHSMALSF-DGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDK 181
Query: 66 -VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAA 124
V ++ G S+AV NNG V+ WG N QLG G ++ T P RV L V +
Sbjct: 182 MVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLT---PCRVAALHGVCILQI 238
Query: 125 FASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG-H 183
+ A+ D+G L+ WG + GQLG G + + P ++ + E++V+++ H
Sbjct: 239 ACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQ-LSPLQI-MMEKERVVEIAACHSAH 296
Query: 184 -ALAQTEDGKLFGWG 197
+ A+T+ G+++ WG
Sbjct: 297 TSAAKTQSGQVYMWG 311
Score = 159 (61.0 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 41/142 (28%), Positives = 75/142 (52%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA-AFASGVVSSAI 134
++ T+N V+ +G N LG G +S PK++E L + + ++ SG
Sbjct: 34 AIYTTHNDEVFVFGLNCSNCLGTGDSQSTIV---PKKLEALCGKKISSLSYGSGPHVLLC 90
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGWGHALAQTEDGKL 193
+DG ++ WG + QLG G + + P +V L +K+++V+ G H++A + DG L
Sbjct: 91 TEDGEVYAWGHNGYSQLGNGAT-NQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDL 149
Query: 194 FGWGYSADGRIGNLGKALESSP 215
+ WGY+ G++G+ A + +P
Sbjct: 150 YAWGYNNCGQVGSGSTANQPTP 171
Score = 129 (50.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 39/124 (31%), Positives = 62/124 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V +G G LGL G G+ P RV L + ++ G+ H+LA+T+ G ++A
Sbjct: 202 VYGWGYNGNGQLGL-----GNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYA 256
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVE-GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG N QLG G +++ P ++ ++V AA S S+A G +++WG+
Sbjct: 257 WGANTYGQLGTG---NKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQC 313
Query: 147 KRGQ 150
RGQ
Sbjct: 314 -RGQ 316
Score = 104 (41.7 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
+ GV ++ IACG+ H+L L G+L + G+N YGQLG + + P+ I
Sbjct: 230 LHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQI 279
Score = 83 (34.3 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 31/100 (31%), Positives = 43/100 (43%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN-FHPV---SISSGL 321
VV IACG S+ + NG + G N GQLG + P + H V I+ G
Sbjct: 183 VVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGY 242
Query: 322 GHSLAICEVRSSNVTGGARGIV-SWGWNRSSQLGRMGPDN 360
H+LA+ + G++ +WG N QLG N
Sbjct: 243 AHTLALTD----------EGLLYAWGANTYGQLGTGNKSN 272
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 232 (86.7 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 61/176 (34%), Positives = 94/176 (53%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSA-GHYHSLAVTNNGAVWAWGR 90
FG + G LGL T T +PT V L S+ ++A G H+L T+ G ++A G
Sbjct: 60 FGSNNWGQLGLGTKTT-----VNKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGG 114
Query: 91 NNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGV-VSSAIGDDGSLWVWGKSKRG 149
NNE QLG G R +++ VE ++ A+G S+A+ DG L++WG + G
Sbjct: 115 NNEGQLGLGDCNDRTSFH---LVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEG 171
Query: 150 QLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
Q+GLGK+ + A+ P V G+++ VS G+ H+ T DG L+ +G G++G
Sbjct: 172 QIGLGKE-SNALTPQEVSV--GKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLG 224
Score = 170 (64.9 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 53/157 (33%), Positives = 80/157 (50%)
Query: 62 LPSDVT-SVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVN 120
L +DV +S G H+ VT NG ++ +G NN QLG G ++ T N P V+ L
Sbjct: 33 LKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLGLG---TKTTVNKPTCVKALKSER 89
Query: 121 VCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV-SF 179
V + G+L+ G + GQLGLG D + VE + +K+ +
Sbjct: 90 VKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLG-DCNDRTSFHLVEFFNKQGPIKMLAA 148
Query: 180 GWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPL 216
G + A T+DG+L+ WG +++G+IG LGK ES+ L
Sbjct: 149 GSNTSAALTQDGRLYMWGDNSEGQIG-LGK--ESNAL 182
Score = 164 (62.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 55/182 (30%), Positives = 86/182 (47%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRN 91
+GD S+G +GL G +A P V + V VS G+YHS VT +GA++ +G
Sbjct: 165 WGDNSEGQIGL-----GKESNALTPQEV-SVGKRVFWVSCGYYHSAFVTVDGALYTFGEK 218
Query: 92 NEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQL 151
+ +LG E A P++V + V A G + + ++ +G + GQL
Sbjct: 219 DSGKLGLST-EKLANHKVPQQVTDIPDRVVQVACGGGHTVALT--ENEVYSFGLGQFGQL 275
Query: 152 GLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKAL 211
G G I E+ +P VE ++ + G H T++G L+ +G DGR G LG
Sbjct: 276 GHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFG---DGRHGKLGLGE 332
Query: 212 ES 213
E+
Sbjct: 333 EN 334
Score = 141 (54.7 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 48/161 (29%), Positives = 75/161 (46%)
Query: 28 AVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWA 87
A+ +FG+ G LGL T + P +V +P V V+ G H++A+T N V++
Sbjct: 211 ALYTFGEKDSGKLGLSTEKLA---NHKVPQQVTDIPDRVVQVACGGGHTVALTEN-EVYS 266
Query: 88 WGRNNEVQLGRGAL--ESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGK 145
+G QLG G ESR P+ VE + V A ++ I D+G L+ +G
Sbjct: 267 FGLGQFGQLGHGTFIFESRL----PRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGD 322
Query: 146 SKRGQLGLGKD-ITEAIVPSRVEALAGEKIVKVSFGWGHAL 185
+ G+LGLG++ T P+ + V+ G H L
Sbjct: 323 GRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHML 363
Score = 133 (51.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 55/216 (25%), Positives = 93/216 (43%)
Query: 131 SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTED 190
++ + ++G L+++G + GQLGLG T P+ V+AL E++ + G H L T
Sbjct: 48 TALVTENGKLFMFGSNNWGQLGLGTKTT-VNKPTCVKALKSERVKLTACGRTHTLVFTSR 106
Query: 191 GKLFGWGYSADGRIGNLGKALESSPLDS----NXXXXXXXXXXXXXXXXXKAQ--KLVSE 244
G L+ G + +G++G LG + + N Q +L
Sbjct: 107 GNLYACGGNNEGQLG-LGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMW 165
Query: 245 GMEKEKYMPIIWE-----PFLVE-GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
G E + + E P V G V ++CG+ HS + +G L + G G+LG
Sbjct: 166 GDNSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGL 225
Query: 299 EKQDMGMFPV-----DINFHPVSISSGLGHSLAICE 329
+ + V DI V ++ G GH++A+ E
Sbjct: 226 STEKLANHKVPQQVTDIPDRVVQVACGGGHTVALTE 261
Score = 80 (33.2 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 249 EKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDM-GMF- 306
E +P + E F +G V ACG +H+ ++ NG+L + G +G+LG +++ F
Sbjct: 283 ESRLPRVVEHFR-KG-RVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFK 340
Query: 307 ----PVDINFHPVSISSGLGHSLAICEVRS 332
P +++H S++ G H L + + R+
Sbjct: 341 PTLCPRFLDYHVHSVTCGGCHMLVLAKPRT 370
Score = 64 (27.6 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
VV +ACG H++ L N V S G +GQLG
Sbjct: 246 VVQVACGGGHTVALTENEVY-SFGLGQFGQLG 276
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 218 (81.8 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 46/152 (30%), Positives = 82/152 (53%)
Query: 55 EPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRV 113
+P +V L + ++ +VS G H+LA+ + G V+AWG +++ QLG + S P+ +
Sbjct: 74 KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEECIRVPRNI 131
Query: 114 EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEK 173
+ L + + S A+ ++ WG++K GQLGLG D + P +++L G
Sbjct: 132 KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIP 191
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
++V+ G H+ T G +FGWG + G++G
Sbjct: 192 FMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Score = 216 (81.1 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 62/192 (32%), Positives = 100/192 (52%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVP-GLPS----DVTSVSAGHYHSLAVTNNG 83
V ++G S G LGL VG + E RVP + S + V+ G+YHSLA++
Sbjct: 105 VYAWGLDSDGQLGL------VGSE--ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
V+ WG+N QLG G + T P+ ++ L + A G S + G+++ W
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQT--SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGR 203
G++K GQLGL D + VP+ +++L +KIV + G H A T++G +F +G G+
Sbjct: 215 GRNKFGQLGLN-DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 204 IGNLGKALESSP 215
+G+ + E +P
Sbjct: 274 LGHNSTSHEINP 285
Score = 190 (71.9 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 59/184 (32%), Positives = 98/184 (53%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGD-AYEPTRVPG-LPSDVTSVSAGHYHSLAVTNNGAVW 86
++ +G+ S G LGL G+ + EP + + V V G H++ V ++G V+
Sbjct: 1 MLCWGNASFGQLGLG----GIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
G N+ QLG +SR P++V LD N+ A + A+ D G ++ WG
Sbjct: 57 TCGCNDLGQLGHE--KSR---KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 147 KRGQLGL-GKDITEAI-VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
GQLGL G + E I VP +++L+ +IV+V+ G+ H+LA ++ ++F WG + G++
Sbjct: 112 SDGQLGLVGSE--ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 205 GNLG 208
G LG
Sbjct: 170 G-LG 172
Score = 157 (60.3 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 51/193 (26%), Positives = 84/193 (43%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNG 83
+ + V +G G LGL T + + G+P V+AG HS +T +G
Sbjct: 153 SKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-GIP--FMQVAAGGAHSFVLTLSG 209
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
A++ WGRN QLG R N K + V +C ++A+ +G ++ +
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH---TAALTKEGGVFTF 266
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT-EDGKLFGWGYSADG 202
G GQLG E I P +V L G + +++ G H A G+++ +G +G
Sbjct: 267 GAGGYGQLGHNSTSHE-INPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 203 RIGNLGKALESSP 215
++G + SP
Sbjct: 326 QLGTGSTSNRKSP 338
Score = 151 (58.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 62/251 (24%), Positives = 109/251 (43%)
Query: 143 WGKSKRGQLGLGKDITEAIV--PSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
WG + GQLGLG I E IV P + + +++ V G H + +DG ++ G +
Sbjct: 4 WGNASFGQLGLG-GIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 201 DGRIGN---LGKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIWE 257
G++G+ K + LD+ K Q + + G++ + + ++
Sbjct: 63 LGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQ-VYAWGLDSDGQLGLVGS 121
Query: 258 ------PFLVEG---VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR----EKQDMG 304
P ++ +++V +ACG+ HSL L + + G N YGQLG +KQ
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSP 181
Query: 305 MFPVDINFHP-VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--- 360
+ P + +++G HS + GA I WG N+ QLG + +N
Sbjct: 182 QLLKSLLGIPFMQVAAGGAHSFVL-------TLSGA--IFGWGRNKFGQLG-LNDENDRY 231
Query: 361 VPLVVEGLEGE 371
VP +++ L +
Sbjct: 232 VPNLLKSLRSQ 242
Score = 93 (37.8 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 31/123 (25%), Positives = 54/123 (43%)
Query: 247 EKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF 306
E ++Y+P + + + ++V I CG DH+ L + G + + G+ YGQLG +
Sbjct: 227 ENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 307 PVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--VPLV 364
P + F + + +A +S + I S+G + QLG N P
Sbjct: 285 PRKV-FE---LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Query: 365 VEG 367
V+G
Sbjct: 341 VKG 343
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 257 (95.5 bits), Expect = 5.2e-20, P = 5.2e-20
Identities = 66/192 (34%), Positives = 100/192 (52%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTS-VSAGHYHSLAVTNNGAVWA 87
V+S GD S+G LG + G + EP + L + + VS G HSLAV + G V+A
Sbjct: 44 VLSCGDNSRGQLGRRGAQRG---ELPEP--IQALETLIVDLVSCGKEHSLAVCHKGRVFA 98
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG +E QLG G E + PK++ L+ + + S A+ D ++ WGK+
Sbjct: 99 WGAGSEGQLGIG--EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNS 156
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNL 207
GQLGLGK+ P RV +L G + +V+ G H+ A + G FGWG ++ G++
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS 216
Query: 208 GKALESSPLDSN 219
G+ + P+ SN
Sbjct: 217 GRNV---PVQSN 225
Score = 235 (87.8 bits), Expect = 7.0e-17, P = 7.0e-17
Identities = 60/181 (33%), Positives = 100/181 (55%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
V ++G GS+G LG+ + ++ P ++ L + VS GHYHSLA++ + V++
Sbjct: 96 VFAWGAGSEGQLGIG-EFKEI---SFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFS 151
Query: 88 WGRNNEVQLGRGA-LESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG+N+ QLG G S+A+ P+RV L+ + + A G S A+ G+ + WG +
Sbjct: 152 WGKNSHGQLGLGKEFPSQAS---PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSN 208
Query: 147 KRGQLGL-GKDI-TEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
GQL L G+++ ++ P V AL +V +S G H T+DGK+F +G + G++
Sbjct: 209 SAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQL 268
Query: 205 G 205
G
Sbjct: 269 G 269
Score = 203 (76.5 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 72/270 (26%), Positives = 120/270 (44%)
Query: 50 GGDAYE--PTRVPGLP-SDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGR-GALESRA 105
G D+ E R G P +++ ++G HSL + N V + G N+ QLGR GA
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL 65
Query: 106 TWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSR 165
P+ ++ L+ + V S A+ G ++ WG GQLG+G+ + P +
Sbjct: 66 ----PEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKK 121
Query: 166 VEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG-----------NLGKALESS 214
+ L KI++VS G H+LA ++D ++F WG ++ G++G ++LE
Sbjct: 122 IMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 215 PLDSNXXXXXXXXXXXXXXXXX-----KAQKLVSEG--MEKEKYMPIIWEPFLVEGVEVV 267
PL A +L G + + P+ ++ + VV
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPL--SVGALKNLGVV 239
Query: 268 DIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
I+CG H+ VL ++G + + G N GQLG
Sbjct: 240 YISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Score = 137 (53.3 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 47/172 (27%), Positives = 71/172 (41%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
V S+G S G LGL P RV L + V+AG HS A++ G +
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQAS----PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFG 204
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG N+ QL N P V L + V ++ + DG ++ +G ++
Sbjct: 205 WGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNR 264
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTED-GKLFGWGY 198
GQLG E P VE + G + ++ G H LA G++ +G+
Sbjct: 265 SGQLGYSPT-PEKRGPQLVERIDG-LVSQIDCGSYHTLAYVHTTGQVVSFGH 314
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 240 (89.5 bits), Expect = 6.8e-20, Sum P(2) = 6.8e-20
Identities = 62/190 (32%), Positives = 98/190 (51%)
Query: 25 SGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNG 83
S V S GD S+G LG + + + EP + L + + VS G HS+AV + G
Sbjct: 45 SNHRVYSCGDNSRGQLGQKSPQSTKRPE--EP--IQALSTVHIDLVSCGKEHSVAVCHQG 100
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
V+ WG +E QLG G ES+ P ++ L + + S A+ +DG ++ W
Sbjct: 101 RVFTWGAGSEGQLGIG--ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSW 158
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGR 203
G +++GQLGLG ++ P +V++L G + +V+ G H+ A + G FGWG + G+
Sbjct: 159 GSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQ 218
Query: 204 I---GNLGKA 210
+ GN KA
Sbjct: 219 LALSGNSAKA 228
Score = 239 (89.2 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 62/192 (32%), Positives = 105/192 (54%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
V ++G GS+G LG+ S ++ PT++ L + VS GHYHSLA++ +G V++
Sbjct: 102 VFTWGAGSEGQLGIGESKE----ISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFS 157
Query: 88 WGRNNEVQLGRGA-LESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG N + QLG G L S+A+ P++V+ L+ + + A G S A+ G+ + WG +
Sbjct: 158 WGSNRQGQLGLGNNLCSQAS---PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNN 214
Query: 147 KRGQLGLGKDITEA---IVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGR 203
+ GQL L + +A P + AL +V +S G+ H TEDG++F +G S+ +
Sbjct: 215 RSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQ 274
Query: 204 IGNLGKALESSP 215
+ + ++ P
Sbjct: 275 LQHSPRSGRGGP 286
Score = 228 (85.3 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 53/164 (32%), Positives = 93/164 (56%)
Query: 55 EPTRVP-GLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRV 113
+P R+ G + ++G HSL + +N V++ G N+ QLG+ + +S +P +
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEP--I 75
Query: 114 EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEK 173
+ L V++ S A+ G ++ WG GQLG+G+ + +P+++ +LAG K
Sbjct: 76 QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIK 135
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKAL--ESSP 215
I++VS G H+LA +EDG++F WG + G++G LG L ++SP
Sbjct: 136 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLG-LGNNLCSQASP 178
Score = 63 (27.2 bits), Expect = 6.8e-20, Sum P(2) = 6.8e-20
Identities = 23/81 (28%), Positives = 38/81 (46%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP--VD-INFHPVSISSG 320
+ VV I+CG++H+ VL +G + + G + QL + P ++ I H I G
Sbjct: 243 LNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECG 302
Query: 321 LGHSLAICEVRSSNVTGGARG 341
H++A V+ G RG
Sbjct: 303 SYHTIAYVYTTGQVVSLG-RG 322
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 255 (94.8 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 108/376 (28%), Positives = 160/376 (42%)
Query: 11 HVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVS 70
HV + + + GT + G G LG G G + P +VPG +V+
Sbjct: 36 HVAAGGNHVLTLRSDGTLWAA-GSNQFGQLG-----DGTGINRTSPVQVPGTWK---TVA 86
Query: 71 AGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWN--DPKRV-EGLDQVNVCAAFAS 127
AG HSL + +G++WAWG N QLG+ + + N P R+ G D V A A
Sbjct: 87 AGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWV---AVSAG 143
Query: 128 GVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA--LAGEKIVKVSFGWGHAL 185
+ S + DG+LW WG + G+LG G ++ P +V A L+ + V V+ G HAL
Sbjct: 144 ELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRP-QPVQVVADPLSNGRYVAVAAGGEHAL 202
Query: 186 AQTEDGKLFGWGYSADGRIGNLGKAL--ESSPLDSNXXXX-XXXXXXXXXXXXXKA---- 238
A DG L+ WG + G++G G + +PL KA
Sbjct: 203 ALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSL 262
Query: 239 ----QKLVSEGMEKEKYMP--IIWEPFLV-EGVEVVDIACGFDHSLVLGRNGVLLSCGSN 291
Q L E + +P + P V G + V IA G H++ L RNG + + G+N
Sbjct: 263 WSWGQNLFGE-LGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNN 321
Query: 292 VYGQLGREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSS 351
G +G P I PV++ + + + A V S + G + WG N +
Sbjct: 322 AQGAVGDGTVANRSTPTLI-VAPVTLVNNVAIA-AGTGVSFSVLANGT--VFGWGGNGAG 377
Query: 352 QLGR--MGPDNVPLVV 365
QLG G P V+
Sbjct: 378 QLGNGTFGAVTAPTVL 393
Score = 212 (79.7 bits), Expect = 9.6e-15, Sum P(3) = 9.6e-15
Identities = 67/205 (32%), Positives = 98/205 (47%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG-LPSDVTSVSAGHYHSLAVTNN 82
A GT + S+GD + G LG T + T PG + +V+AG SLA+ +
Sbjct: 522 ADGT-LWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQAD 580
Query: 83 GAVWAWGRNNEVQLGRG-ALESRATW-NDPKRVEGLDQVNVCAAFASGVVSSAIGDD--- 137
G +W WG N+ +QLG A+ + AT N P ++ + AF S V+ A G D
Sbjct: 581 GTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPST--AFNSSWVAIAAGQDHGL 638
Query: 138 -----GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGK 192
G+LW WG + GQLG G T P +V G V ++ G H+LA DG
Sbjct: 639 SLQADGTLWAWGANSVGQLGNGVT-TATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGT 697
Query: 193 LFGWGYSADGRIGNLGKALESSPLD 217
L+ WG + G++G ++ PL+
Sbjct: 698 LWAWGNNTSGQLGTGPHPGDADPLN 722
Score = 211 (79.3 bits), Expect = 7.8e-20, Sum P(2) = 7.8e-20
Identities = 65/199 (32%), Positives = 90/199 (45%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNG 83
A+GT V +G G LG G G PT + S V G SL + +NG
Sbjct: 364 ANGT-VFGWGGNGAGQLG-----NGTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNG 417
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AIGDDGSLWV 142
+WAWG N QLG G A P V G A+G S A+ DG+LW
Sbjct: 418 TLWAWGGNASGQLGDGTTTPSAI---PVPVVG--GAGNWRTTATGTAHSVAVRADGTLWA 472
Query: 143 WGKSKRGQLGLGKDITEAIVPSRVE----ALAGEKIVKVSFGWGHALAQTEDGKLFGWGY 198
WG + GQLG+G + A P ++ A AG V+ G H+L DG L+ WG
Sbjct: 473 WGDNSSGQLGIGSTVA-ASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGD 531
Query: 199 SADGRIGN-LGKALESSPL 216
+ G++G+ G + ++P+
Sbjct: 532 NTFGQLGDGTGTSNRTTPV 550
Score = 210 (79.0 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 60/197 (30%), Positives = 94/197 (47%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNG 83
A GT + ++GD S G LG+ +++ T +D T+V+ G HSL + +G
Sbjct: 466 ADGT-LWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADG 524
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRV----EGLDQVNVCAAFASGVVSSAIGDDGS 139
+W+WG N QLG G S T P ++ G N A A GV S A+ DG+
Sbjct: 525 TLWSWGDNTFGQLGDGTGTSNRT--TPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGT 582
Query: 140 LWVWGKSKRGQLGLGKDI----TEAIVPSRVEALA------GEKIVKVSFGWGHALAQTE 189
+W WG + QLG + T+ VP+++ + V ++ G H L+
Sbjct: 583 IWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQA 642
Query: 190 DGKLFGWGYSADGRIGN 206
DG L+ WG ++ G++GN
Sbjct: 643 DGTLWAWGANSVGQLGN 659
Score = 199 (75.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 68/226 (30%), Positives = 102/226 (45%)
Query: 10 NHVNVLTSRIFMRS--ASGTAVVSFGDGSQGALGL-PTSLT-GVGGDAYEPTRVPGLPSD 65
N V V +F + A GT + ++GD S LG P LT + V PS
Sbjct: 563 NWVAVAAGGVFSLALQADGT-IWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPST 621
Query: 66 V-----TSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVN 120
+++AG H L++ +G +WAWG N+ QLG G + T EG+ V+
Sbjct: 622 AFNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVS 681
Query: 121 VCAAFASGVVSSAIG-DDGSLWVWGKSKRGQLGLGKDITEA--------IVPSRV----E 167
+ A+G S G DG+LW WG + GQLG G +A VP+R+
Sbjct: 682 L----AAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNP 737
Query: 168 ALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALES 213
A + + + G H+ A +G L+ WG + G++GN G E+
Sbjct: 738 VSAADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGN-GTTTEA 782
Score = 170 (64.9 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 57/171 (33%), Positives = 84/171 (49%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRV---PGLPSDVTSVSAGHYHSLAVT 80
A GT + ++G S G LG GV + P +V G+P S++AG HSLA
Sbjct: 642 ADGT-LWAWGANSVGQLG-----NGVTTATFTPVQVINAEGVP--YVSLAAGTSHSLAGR 693
Query: 81 NNGAVWAWGRNNEVQLGRGALESRATWNDPK------RVEGLDQVNVC----AAFASGVV 130
++G +WAWG N QLG G A +P+ R+ + V+ A A G
Sbjct: 694 SDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSH 753
Query: 131 SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFG 180
S+A+ +G+LW WG++ GQLG G TEA +P+ + E ++FG
Sbjct: 754 SAALKSNGTLWTWGQNTSGQLGNGTT-TEADIPTALLEPRISVSPASLAFG 803
Score = 165 (63.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 56/182 (30%), Positives = 82/182 (45%)
Query: 21 MRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVT 80
+RS +GT + ++G + G LG G + P V G + + + G HS+AV
Sbjct: 413 LRS-NGT-LWAWGGNASGQLG-----DGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVR 465
Query: 81 NNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AIGDDGS 139
+G +WAWG N+ QLG G+ + +T N A A G S + DG+
Sbjct: 466 ADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGT 525
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSR-VEALAGE---KIVKVSFGWGHALAQTEDGKLFG 195
LW WG + GQLG G + P + V G V V+ G +LA DG ++
Sbjct: 526 LWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWT 585
Query: 196 WG 197
WG
Sbjct: 586 WG 587
Score = 155 (59.6 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 51/148 (34%), Positives = 68/148 (45%)
Query: 64 SDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA 123
S V V+AG H L + ++G +WA G N QLG G +R + P +V G
Sbjct: 32 SAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTS---PVQVPG-----TWK 83
Query: 124 AFASGVVSS-AIGDDGSLWVWGKSKRGQLGL----GKDITEAIVPSRVEALAGEKIVKVS 178
A+G S I DGSLW WG + GQLG G+ T P R+ G V VS
Sbjct: 84 TVAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGT--GNDWVAVS 141
Query: 179 FGWGHALAQTEDGKLFGWGYSADGRIGN 206
G + DG L+ WG + G +G+
Sbjct: 142 AGELTSFGLKGDGTLWSWGNNLFGELGD 169
Score = 106 (42.4 bits), Expect = 7.8e-20, Sum P(2) = 7.8e-20
Identities = 39/97 (40%), Positives = 48/97 (49%)
Query: 267 VDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD-INFH--P-VSISSGLG 322
V IA G DH L L +G L + G+N GQLG PV IN P VS+++G
Sbjct: 628 VAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTS 687
Query: 323 HSLAICEVRSSNVTGGARGIV-SWGWNRSSQLGRMGP 358
HSLA G + G + +WG N S QLG GP
Sbjct: 688 HSLA----------GRSDGTLWAWGNNTSGQLGT-GP 713
Score = 88 (36.0 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 31/121 (25%), Positives = 48/121 (39%)
Query: 242 VSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQ 301
+ G+ + P+ + EGV V +A G HSL +G L + G+N GQLG
Sbjct: 657 LGNGVTTATFTPV--QVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPH 714
Query: 302 DMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIV--------SWGWNRSSQL 353
P++ H V + ++ + GG+ +WG N S QL
Sbjct: 715 PGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQL 774
Query: 354 G 354
G
Sbjct: 775 G 775
Score = 76 (31.8 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 29/80 (36%), Positives = 36/80 (45%)
Query: 276 SLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNV 335
SL L NG L + G N GQLG D P I PV + G G+ + +V
Sbjct: 410 SLGLRSNGTLWAWGGNASGQLG----DGTTTPSAI---PVPVVGGAGNWRTTATGTAHSV 462
Query: 336 TGGARGIV-SWGWNRSSQLG 354
A G + +WG N S QLG
Sbjct: 463 AVRADGTLWAWGDNSSGQLG 482
Score = 66 (28.3 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 269 IACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+A G HSL L +G L S G N +GQLG
Sbjct: 510 VAGGGAHSLGLKADGTLWSWGDNTFGQLG 538
Score = 63 (27.2 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 32/107 (29%), Positives = 45/107 (42%)
Query: 270 ACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF-HPVSISSGLGHSLAIC 328
A G HS+ + +G L + G N GQLG P I +P S + A+
Sbjct: 455 ATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDW---TAVA 511
Query: 329 EVRSSNVTGGARGIV-SWGWNRSSQLGR-MGPDN--VPL-VVEGLEG 370
+ ++ A G + SWG N QLG G N P+ +V G G
Sbjct: 512 GGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPG 558
Score = 60 (26.2 bits), Expect = 9.6e-15, Sum P(3) = 9.6e-15
Identities = 16/47 (34%), Positives = 20/47 (42%)
Query: 272 GFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSIS 318
G HS L NG L + G N GQLG P + +S+S
Sbjct: 750 GGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPTALLEPRISVS 796
Score = 48 (22.0 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 27/96 (28%), Positives = 41/96 (42%)
Query: 267 VDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSI------SSG 320
V +A G SL L +G + + G N QLG + M + P P + S+
Sbjct: 565 VAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDPA-M-LTPATQRNVPAQLAVASPPSTA 622
Query: 321 LGHS-LAICEVRSSNVTGGARGIV-SWGWNRSSQLG 354
S +AI + ++ A G + +WG N QLG
Sbjct: 623 FNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLG 658
Score = 37 (18.1 bits), Expect = 9.6e-15, Sum P(3) = 9.6e-15
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 330 VRSSNVTGGARGIVSWG 346
V+SS VT RG+ G
Sbjct: 1155 VQSSGVTASLRGVAHSG 1171
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 255 (94.8 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 108/376 (28%), Positives = 160/376 (42%)
Query: 11 HVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVS 70
HV + + + GT + G G LG G G + P +VPG +V+
Sbjct: 36 HVAAGGNHVLTLRSDGTLWAA-GSNQFGQLG-----DGTGINRTSPVQVPGTWK---TVA 86
Query: 71 AGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWN--DPKRV-EGLDQVNVCAAFAS 127
AG HSL + +G++WAWG N QLG+ + + N P R+ G D V A A
Sbjct: 87 AGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWV---AVSAG 143
Query: 128 GVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA--LAGEKIVKVSFGWGHAL 185
+ S + DG+LW WG + G+LG G ++ P +V A L+ + V V+ G HAL
Sbjct: 144 ELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRP-QPVQVVADPLSNGRYVAVAAGGEHAL 202
Query: 186 AQTEDGKLFGWGYSADGRIGNLGKAL--ESSPLDSNXXXX-XXXXXXXXXXXXXKA---- 238
A DG L+ WG + G++G G + +PL KA
Sbjct: 203 ALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSL 262
Query: 239 ----QKLVSEGMEKEKYMP--IIWEPFLV-EGVEVVDIACGFDHSLVLGRNGVLLSCGSN 291
Q L E + +P + P V G + V IA G H++ L RNG + + G+N
Sbjct: 263 WSWGQNLFGE-LGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNN 321
Query: 292 VYGQLGREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSS 351
G +G P I PV++ + + + A V S + G + WG N +
Sbjct: 322 AQGAVGDGTVANRSTPTLI-VAPVTLVNNVAIA-AGTGVSFSVLANGT--VFGWGGNGAG 377
Query: 352 QLGR--MGPDNVPLVV 365
QLG G P V+
Sbjct: 378 QLGNGTFGAVTAPTVL 393
Score = 212 (79.7 bits), Expect = 9.6e-15, Sum P(3) = 9.6e-15
Identities = 67/205 (32%), Positives = 98/205 (47%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG-LPSDVTSVSAGHYHSLAVTNN 82
A GT + S+GD + G LG T + T PG + +V+AG SLA+ +
Sbjct: 522 ADGT-LWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQAD 580
Query: 83 GAVWAWGRNNEVQLGRG-ALESRATW-NDPKRVEGLDQVNVCAAFASGVVSSAIGDD--- 137
G +W WG N+ +QLG A+ + AT N P ++ + AF S V+ A G D
Sbjct: 581 GTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPST--AFNSSWVAIAAGQDHGL 638
Query: 138 -----GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGK 192
G+LW WG + GQLG G T P +V G V ++ G H+LA DG
Sbjct: 639 SLQADGTLWAWGANSVGQLGNGVT-TATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGT 697
Query: 193 LFGWGYSADGRIGNLGKALESSPLD 217
L+ WG + G++G ++ PL+
Sbjct: 698 LWAWGNNTSGQLGTGPHPGDADPLN 722
Score = 211 (79.3 bits), Expect = 7.8e-20, Sum P(2) = 7.8e-20
Identities = 65/199 (32%), Positives = 90/199 (45%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNG 83
A+GT V +G G LG G G PT + S V G SL + +NG
Sbjct: 364 ANGT-VFGWGGNGAGQLG-----NGTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNG 417
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AIGDDGSLWV 142
+WAWG N QLG G A P V G A+G S A+ DG+LW
Sbjct: 418 TLWAWGGNASGQLGDGTTTPSAI---PVPVVG--GAGNWRTTATGTAHSVAVRADGTLWA 472
Query: 143 WGKSKRGQLGLGKDITEAIVPSRVE----ALAGEKIVKVSFGWGHALAQTEDGKLFGWGY 198
WG + GQLG+G + A P ++ A AG V+ G H+L DG L+ WG
Sbjct: 473 WGDNSSGQLGIGSTVA-ASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGD 531
Query: 199 SADGRIGN-LGKALESSPL 216
+ G++G+ G + ++P+
Sbjct: 532 NTFGQLGDGTGTSNRTTPV 550
Score = 210 (79.0 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 60/197 (30%), Positives = 94/197 (47%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNG 83
A GT + ++GD S G LG+ +++ T +D T+V+ G HSL + +G
Sbjct: 466 ADGT-LWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADG 524
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRV----EGLDQVNVCAAFASGVVSSAIGDDGS 139
+W+WG N QLG G S T P ++ G N A A GV S A+ DG+
Sbjct: 525 TLWSWGDNTFGQLGDGTGTSNRT--TPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGT 582
Query: 140 LWVWGKSKRGQLGLGKDI----TEAIVPSRVEALA------GEKIVKVSFGWGHALAQTE 189
+W WG + QLG + T+ VP+++ + V ++ G H L+
Sbjct: 583 IWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQA 642
Query: 190 DGKLFGWGYSADGRIGN 206
DG L+ WG ++ G++GN
Sbjct: 643 DGTLWAWGANSVGQLGN 659
Score = 199 (75.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 68/226 (30%), Positives = 102/226 (45%)
Query: 10 NHVNVLTSRIFMRS--ASGTAVVSFGDGSQGALGL-PTSLT-GVGGDAYEPTRVPGLPSD 65
N V V +F + A GT + ++GD S LG P LT + V PS
Sbjct: 563 NWVAVAAGGVFSLALQADGT-IWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPST 621
Query: 66 V-----TSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVN 120
+++AG H L++ +G +WAWG N+ QLG G + T EG+ V+
Sbjct: 622 AFNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVS 681
Query: 121 VCAAFASGVVSSAIG-DDGSLWVWGKSKRGQLGLGKDITEA--------IVPSRV----E 167
+ A+G S G DG+LW WG + GQLG G +A VP+R+
Sbjct: 682 L----AAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNP 737
Query: 168 ALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALES 213
A + + + G H+ A +G L+ WG + G++GN G E+
Sbjct: 738 VSAADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGN-GTTTEA 782
Score = 170 (64.9 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 57/171 (33%), Positives = 84/171 (49%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRV---PGLPSDVTSVSAGHYHSLAVT 80
A GT + ++G S G LG GV + P +V G+P S++AG HSLA
Sbjct: 642 ADGT-LWAWGANSVGQLG-----NGVTTATFTPVQVINAEGVP--YVSLAAGTSHSLAGR 693
Query: 81 NNGAVWAWGRNNEVQLGRGALESRATWNDPK------RVEGLDQVNVC----AAFASGVV 130
++G +WAWG N QLG G A +P+ R+ + V+ A A G
Sbjct: 694 SDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSH 753
Query: 131 SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFG 180
S+A+ +G+LW WG++ GQLG G TEA +P+ + E ++FG
Sbjct: 754 SAALKSNGTLWTWGQNTSGQLGNGTT-TEADIPTALLEPRISVSPASLAFG 803
Score = 165 (63.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 56/182 (30%), Positives = 82/182 (45%)
Query: 21 MRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVT 80
+RS +GT + ++G + G LG G + P V G + + + G HS+AV
Sbjct: 413 LRS-NGT-LWAWGGNASGQLG-----DGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVR 465
Query: 81 NNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AIGDDGS 139
+G +WAWG N+ QLG G+ + +T N A A G S + DG+
Sbjct: 466 ADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGT 525
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSR-VEALAGE---KIVKVSFGWGHALAQTEDGKLFG 195
LW WG + GQLG G + P + V G V V+ G +LA DG ++
Sbjct: 526 LWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWT 585
Query: 196 WG 197
WG
Sbjct: 586 WG 587
Score = 155 (59.6 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 51/148 (34%), Positives = 68/148 (45%)
Query: 64 SDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA 123
S V V+AG H L + ++G +WA G N QLG G +R + P +V G
Sbjct: 32 SAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTS---PVQVPG-----TWK 83
Query: 124 AFASGVVSS-AIGDDGSLWVWGKSKRGQLGL----GKDITEAIVPSRVEALAGEKIVKVS 178
A+G S I DGSLW WG + GQLG G+ T P R+ G V VS
Sbjct: 84 TVAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGT--GNDWVAVS 141
Query: 179 FGWGHALAQTEDGKLFGWGYSADGRIGN 206
G + DG L+ WG + G +G+
Sbjct: 142 AGELTSFGLKGDGTLWSWGNNLFGELGD 169
Score = 106 (42.4 bits), Expect = 7.8e-20, Sum P(2) = 7.8e-20
Identities = 39/97 (40%), Positives = 48/97 (49%)
Query: 267 VDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD-INFH--P-VSISSGLG 322
V IA G DH L L +G L + G+N GQLG PV IN P VS+++G
Sbjct: 628 VAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTS 687
Query: 323 HSLAICEVRSSNVTGGARGIV-SWGWNRSSQLGRMGP 358
HSLA G + G + +WG N S QLG GP
Sbjct: 688 HSLA----------GRSDGTLWAWGNNTSGQLGT-GP 713
Score = 88 (36.0 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 31/121 (25%), Positives = 48/121 (39%)
Query: 242 VSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQ 301
+ G+ + P+ + EGV V +A G HSL +G L + G+N GQLG
Sbjct: 657 LGNGVTTATFTPV--QVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPH 714
Query: 302 DMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIV--------SWGWNRSSQL 353
P++ H V + ++ + GG+ +WG N S QL
Sbjct: 715 PGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQL 774
Query: 354 G 354
G
Sbjct: 775 G 775
Score = 76 (31.8 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 29/80 (36%), Positives = 36/80 (45%)
Query: 276 SLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNV 335
SL L NG L + G N GQLG D P I PV + G G+ + +V
Sbjct: 410 SLGLRSNGTLWAWGGNASGQLG----DGTTTPSAI---PVPVVGGAGNWRTTATGTAHSV 462
Query: 336 TGGARGIV-SWGWNRSSQLG 354
A G + +WG N S QLG
Sbjct: 463 AVRADGTLWAWGDNSSGQLG 482
Score = 66 (28.3 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 269 IACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+A G HSL L +G L S G N +GQLG
Sbjct: 510 VAGGGAHSLGLKADGTLWSWGDNTFGQLG 538
Score = 63 (27.2 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 32/107 (29%), Positives = 45/107 (42%)
Query: 270 ACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF-HPVSISSGLGHSLAIC 328
A G HS+ + +G L + G N GQLG P I +P S + A+
Sbjct: 455 ATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDW---TAVA 511
Query: 329 EVRSSNVTGGARGIV-SWGWNRSSQLGR-MGPDN--VPL-VVEGLEG 370
+ ++ A G + SWG N QLG G N P+ +V G G
Sbjct: 512 GGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPG 558
Score = 60 (26.2 bits), Expect = 9.6e-15, Sum P(3) = 9.6e-15
Identities = 16/47 (34%), Positives = 20/47 (42%)
Query: 272 GFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSIS 318
G HS L NG L + G N GQLG P + +S+S
Sbjct: 750 GGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPTALLEPRISVS 796
Score = 48 (22.0 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 27/96 (28%), Positives = 41/96 (42%)
Query: 267 VDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSI------SSG 320
V +A G SL L +G + + G N QLG + M + P P + S+
Sbjct: 565 VAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDPA-M-LTPATQRNVPAQLAVASPPSTA 622
Query: 321 LGHS-LAICEVRSSNVTGGARGIV-SWGWNRSSQLG 354
S +AI + ++ A G + +WG N QLG
Sbjct: 623 FNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLG 658
Score = 37 (18.1 bits), Expect = 9.6e-15, Sum P(3) = 9.6e-15
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 330 VRSSNVTGGARGIVSWG 346
V+SS VT RG+ G
Sbjct: 1155 VQSSGVTASLRGVAHSG 1171
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 238 (88.8 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 55/184 (29%), Positives = 92/184 (50%)
Query: 34 DGSQGALGLPTS-LTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWAWGRN 91
DG GL T G + +P + L + V+ G HS+A+++ G V++WG
Sbjct: 52 DGEVYTCGLNTKGQLGHESEGSKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAG 111
Query: 92 NEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQL 151
++ QLG +E T P+ ++ L+Q + A+ DG + WG++ GQL
Sbjct: 112 SDGQLGLTTIEDAVTV--PRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQL 169
Query: 152 GLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKAL 211
GLGK+ P RV++L G + +V+ G H+ A + G +FGWG ++ G++G +
Sbjct: 170 GLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERD 229
Query: 212 ESSP 215
SP
Sbjct: 230 RESP 233
Score = 231 (86.4 bits), Expect = 9.8e-19, Sum P(2) = 9.8e-19
Identities = 61/180 (33%), Positives = 95/180 (52%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V S+G GS G LGL T V P + L + +S G++H LA+ +G +
Sbjct: 105 VFSWGAGSDGQLGLTTIEDAVT----VPRLIKKLNQQTILQISCGNWHCLALAADGQFFT 160
Query: 88 WGRNNEVQLGRGA-LESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG+N+ QLG G S+A+ P+RV+ LD + + A G S A+ G+++ WGK+
Sbjct: 161 WGQNSYGQLGLGKECPSQAS---PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKN 217
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
GQLGL D + P V+ L +K+V +S G H T+ G +F +G + G++G+
Sbjct: 218 SSGQLGLS-DERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276
Score = 183 (69.5 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 61/189 (32%), Positives = 96/189 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VTSVSAGHYHSLAVTNNGAVW 86
++ +G S G G+ ++L + EP +V G D V V+ G HS+ + +G V+
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVI---IPEP-QVYGFIHDRNVKEVACGGNHSVFLLEDGEVY 56
Query: 87 AWGRNNEVQLGRGALESRATWNDP-KRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGK 145
G N + QLG ES + +P + G V+V + V A+ D G ++ WG
Sbjct: 57 TCGLNTKGQLGH---ESEGSKPEPIGALAGQHIVHVACGESHSV---ALSDQGQVFSWGA 110
Query: 146 SKRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
GQLGL I +A+ VP ++ L + I+++S G H LA DG+ F WG ++ G++
Sbjct: 111 GSDGQLGL-TTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQL 169
Query: 205 GNLGKALES 213
G LGK S
Sbjct: 170 G-LGKECPS 177
Score = 159 (61.0 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 49/177 (27%), Positives = 79/177 (44%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWG 89
++G S G LGL P RV L + V+AG HS A++ +GAV+ WG
Sbjct: 160 TWGQNSYGQLGLGKECPSQAS----PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWG 215
Query: 90 RNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRG 149
+N+ QLG L P V+ L V ++ + G ++ +G G
Sbjct: 216 KNSSGQLG---LSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272
Query: 150 QLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT-EDGKLFGWGYSADGRIG 205
QLG + + + P RV L G ++ +++ G H LA G ++ +G G++G
Sbjct: 273 QLG-HDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328
Score = 144 (55.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 56/230 (24%), Positives = 105/230 (45%)
Query: 143 WGKSKRGQLGLGKDITEAIVPS-RVEALAGEKIVK-VSFGWGHALAQTEDGKLFGWGYSA 200
WG S GQ G+G ++ + I+P +V ++ VK V+ G H++ EDG+++ G +
Sbjct: 4 WGYSSFGQPGIGSNL-QVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 201 DGRIGNLGKALESSPLDSNXXXXXXXXXXXXXXXXXKAQK--LVSEGMEKEKYMPI---- 254
G++G+ + + P+ + + + + S G + + +
Sbjct: 63 KGQLGHESEGSKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIE 122
Query: 255 --IWEPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF-PV 308
+ P L++ + ++ I+CG H L L +G + G N YGQLG K+ P
Sbjct: 123 DAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQ 182
Query: 309 ---DINFHPVS-ISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
++ P++ +++G HS A+ +++G G WG N S QLG
Sbjct: 183 RVKSLDGIPLAQVAAGGAHSFAL------SLSGAVFG---WGKNSSGQLG 223
Score = 64 (27.6 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 263 GVEVVDIACGFDHSLV-LGRNGVLLSCGSNVYGQLG 297
G EV IACG H+L + +G++ + G GQLG
Sbjct: 293 GSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 217 (81.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 58/188 (30%), Positives = 96/188 (51%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
V ++G S G LGL S + P + L + V+ G+YHSLA++ V+
Sbjct: 105 VYAWGLDSDGQLGLQGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG+N QLG G + T P+ ++ L + A G S + G+++ WG++K
Sbjct: 161 WGQNKYGQLGLGIDCQKQT--SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNL 207
GQLGL D + VP+ +++L +KIV + G H A T++G +F +G G++G+
Sbjct: 219 FGQLGLN-DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 208 GKALESSP 215
+ E +P
Sbjct: 278 STSHEINP 285
Score = 215 (80.7 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 46/153 (30%), Positives = 84/153 (54%)
Query: 55 EPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLG-RGALESRATWNDPKR 112
+P +V L + ++ +V+ G H+LA+ + G V+AWG +++ QLG +G+ E P+
Sbjct: 74 KPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRV---PRN 130
Query: 113 VEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGE 172
++ L + + S A+ ++ WG++K GQLGLG D + P +++L G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGI 190
Query: 173 KIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
++V+ G H+ T G +FGWG + G++G
Sbjct: 191 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Score = 195 (73.7 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 59/183 (32%), Positives = 97/183 (53%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGD-AYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVW 86
++ +G+ S G LGL G+ + EP R + V V G H++ V ++G V+
Sbjct: 1 MLCWGNASYGQLGLG----GIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
G N+ QLG +SR P++V LD N+ A + A+ D G ++ WG
Sbjct: 57 TCGCNDLGQLGHE--KSR---KKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLD 111
Query: 147 KRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
GQLGL + E I VP +++L+ +IV+V+ G+ H+LA ++ ++F WG + G++G
Sbjct: 112 SDGQLGL-QGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 206 NLG 208
LG
Sbjct: 171 -LG 172
Score = 158 (60.7 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 65/251 (25%), Positives = 109/251 (43%)
Query: 143 WGKSKRGQLGLGKDITEAIV--PSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
WG + GQLGLG I E IV P R + +K+ V G H + +DG ++ G +
Sbjct: 4 WGNASYGQLGLG-GIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 201 DGRIGN---LGKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPI--- 254
G++G+ K + LD+ K Q + + G++ + + +
Sbjct: 63 LGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQ-VYAWGLDSDGQLGLQGS 121
Query: 255 ---IWEPFLVEG---VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR----EKQDMG 304
I P ++ +++V +ACG+ HSL L + + G N YGQLG +KQ
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSP 181
Query: 305 MFPVDINFHP-VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--- 360
+ P + +++G HS + GA I WG N+ QLG + +N
Sbjct: 182 QLIKSLLGIPFMQVAAGGAHSFVL-------TLSGA--IFGWGRNKFGQLG-LNDENDRY 231
Query: 361 VPLVVEGLEGE 371
VP +++ L +
Sbjct: 232 VPNLLKSLRSQ 242
Score = 152 (58.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 51/193 (26%), Positives = 83/193 (43%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNG 83
+ + V +G G LGL + + G+P V+AG HS +T +G
Sbjct: 153 SKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL-GIP--FMQVAAGGAHSFVLTLSG 209
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
A++ WGRN QLG R N K + V +C ++A+ +G ++ +
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH---TAALTKEGGVFTF 266
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT-EDGKLFGWGYSADG 202
G GQLG E I P +V L G + +V+ G H A G+++ +G +G
Sbjct: 267 GAGGYGQLGHNSTSHE-INPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 203 RIGNLGKALESSP 215
++G + SP
Sbjct: 326 QLGTGSTSNRKSP 338
Score = 92 (37.4 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 31/123 (25%), Positives = 54/123 (43%)
Query: 247 EKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF 306
E ++Y+P + + + ++V I CG DH+ L + G + + G+ YGQLG +
Sbjct: 227 ENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 307 PVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--VPLV 364
P + F + + +A +S + I S+G + QLG N P
Sbjct: 285 PRKV-FE---LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Query: 365 VEG 367
V+G
Sbjct: 341 VKG 343
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 218 (81.8 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 58/188 (30%), Positives = 96/188 (51%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
V ++G S G LGL S + P + L + V+ G+YHSLA++ V+
Sbjct: 105 VYAWGLDSDGQLGLQGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG+N QLG G + T P+ ++ L + A G S + G+++ WG++K
Sbjct: 161 WGQNKYGQLGLGIECQKQT--SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNL 207
GQLGL D + VP+ +++L +KIV + G H A T++G +F +G G++G+
Sbjct: 219 FGQLGLN-DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 208 GKALESSP 215
+ E +P
Sbjct: 278 STSHEINP 285
Score = 214 (80.4 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 46/153 (30%), Positives = 84/153 (54%)
Query: 55 EPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLG-RGALESRATWNDPKR 112
+P +V L + ++ +VS G H+LA+ + G V+AWG +++ QLG +G+ E P+
Sbjct: 74 KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRV---PRN 130
Query: 113 VEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGE 172
++ L + + S A+ ++ WG++K GQLGLG + + P +++L G
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGI 190
Query: 173 KIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
++V+ G H+ T G +FGWG + G++G
Sbjct: 191 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Score = 192 (72.6 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 58/183 (31%), Positives = 97/183 (53%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGD-AYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVW 86
++ +G+ S G LGL G+ + EP + + V V G H++ V ++G V+
Sbjct: 1 MLCWGNASYGQLGLG----GIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
G N+ QLG +SR P++V LD N+ A + A+ D G ++ WG
Sbjct: 57 TCGCNDLGQLGHE--KSR---KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 147 KRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
GQLGL + E I VP +++L+ +IV+V+ G+ H+LA ++ ++F WG + G++G
Sbjct: 112 SDGQLGL-QGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 206 NLG 208
LG
Sbjct: 171 -LG 172
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 64/251 (25%), Positives = 109/251 (43%)
Query: 143 WGKSKRGQLGLGKDITEAIV--PSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
WG + GQLGLG I E IV P + + +K+ V G H + +DG ++ G +
Sbjct: 4 WGNASYGQLGLG-GIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 201 DGRIGN---LGKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPI--- 254
G++G+ K + LD+ K Q + + G++ + + +
Sbjct: 63 LGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQ-VYAWGLDSDGQLGLQGS 121
Query: 255 ---IWEPFLVEG---VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR----EKQDMG 304
I P ++ +++V +ACG+ HSL L + + G N YGQLG +KQ
Sbjct: 122 EECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSP 181
Query: 305 MFPVDINFHP-VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--- 360
+ P + +++G HS + GA I WG N+ QLG + +N
Sbjct: 182 QLIKSLLGIPFMQVAAGGAHSFVL-------TLSGA--IFGWGRNKFGQLG-LNDENDRY 231
Query: 361 VPLVVEGLEGE 371
VP +++ L +
Sbjct: 232 VPNLLKSLRSQ 242
Score = 151 (58.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 50/193 (25%), Positives = 83/193 (43%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNG 83
+ + V +G G LGL + + G+P V+AG HS +T +G
Sbjct: 153 SKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL-GIP--FMQVAAGGAHSFVLTLSG 209
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
A++ WGRN QLG R N K + V +C ++A+ +G ++ +
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH---TAALTKEGGVFTF 266
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT-EDGKLFGWGYSADG 202
G GQLG E I P +V L G + +++ G H A G+++ +G +G
Sbjct: 267 GAGGYGQLGHNSTSHE-INPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 203 RIGNLGKALESSP 215
++G + SP
Sbjct: 326 QLGTGSTSNRKSP 338
Score = 93 (37.8 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 31/123 (25%), Positives = 54/123 (43%)
Query: 247 EKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF 306
E ++Y+P + + + ++V I CG DH+ L + G + + G+ YGQLG +
Sbjct: 227 ENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 307 PVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--VPLV 364
P + F + + +A +S + I S+G + QLG N P
Sbjct: 285 PRKV-FE---LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Query: 365 VEG 367
V+G
Sbjct: 341 VKG 343
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 237 (88.5 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 56/184 (30%), Positives = 92/184 (50%)
Query: 34 DGSQGALGLPTS-LTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWAWGRN 91
DG GL T G + +P V L + V+ G HS+A+++ G V++WG
Sbjct: 52 DGEVYTCGLNTKGQLGHESEGSKPAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAG 111
Query: 92 NEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQL 151
++ QLG +E T P+ ++ L+Q + A+ DG + WG++ GQL
Sbjct: 112 SDGQLGLTTIEDAVTV--PRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQL 169
Query: 152 GLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKAL 211
GLGK+ P RV++L G + +V+ G H+ A + G +FGWG ++ G++G +
Sbjct: 170 GLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERD 229
Query: 212 ESSP 215
SP
Sbjct: 230 RESP 233
Score = 231 (86.4 bits), Expect = 9.8e-19, Sum P(2) = 9.8e-19
Identities = 61/180 (33%), Positives = 95/180 (52%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V S+G GS G LGL T V P + L + +S G++H LA+ +G +
Sbjct: 105 VFSWGAGSDGQLGLTTIEDAVT----VPRLIKKLNQQTILQISCGNWHCLALAADGQFFT 160
Query: 88 WGRNNEVQLGRGA-LESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG+N+ QLG G S+A+ P+RV+ LD + + A G S A+ G+++ WGK+
Sbjct: 161 WGQNSYGQLGLGKECPSQAS---PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKN 217
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
GQLGL D + P V+ L +K+V +S G H T+ G +F +G + G++G+
Sbjct: 218 SSGQLGLS-DERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276
Score = 188 (71.2 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 60/188 (31%), Positives = 95/188 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VTSVSAGHYHSLAVTNNGAVW 86
++ +G S G G+ ++L + EP +V G D V V+ G HS+ + +G V+
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVI---IPEP-QVYGFIHDRNVKEVACGGNHSVFLLEDGEVY 56
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
G N + QLG + S+ W + G V+V + V A+ D G ++ WG
Sbjct: 57 TCGLNTKGQLGHESEGSKPAWVGT--LAGQHIVHVACGESHSV---ALSDQGQVFSWGAG 111
Query: 147 KRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
GQLGL I +A+ VP ++ L + I+++S G H LA DG+ F WG ++ G++G
Sbjct: 112 SDGQLGL-TTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLG 170
Query: 206 NLGKALES 213
LGK S
Sbjct: 171 -LGKECPS 177
Score = 159 (61.0 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 49/177 (27%), Positives = 79/177 (44%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWG 89
++G S G LGL P RV L + V+AG HS A++ +GAV+ WG
Sbjct: 160 TWGQNSYGQLGLGKECPSQAS----PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWG 215
Query: 90 RNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRG 149
+N+ QLG L P V+ L V ++ + G ++ +G G
Sbjct: 216 KNSSGQLG---LSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272
Query: 150 QLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT-EDGKLFGWGYSADGRIG 205
QLG + + + P RV L G ++ +++ G H LA G ++ +G G++G
Sbjct: 273 QLG-HDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328
Score = 69 (29.3 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
++G+ + +A G HS L +G + G N GQLG
Sbjct: 187 LDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223
Score = 64 (27.6 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 263 GVEVVDIACGFDHSLV-LGRNGVLLSCGSNVYGQLG 297
G EV IACG H+L + +G++ + G GQLG
Sbjct: 293 GSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLG 328
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 252 (93.8 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 71/252 (28%), Positives = 127/252 (50%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAA 124
++ ++G +HSL + +N V++ G N+ QLG+ +S P+ ++ L+ ++V
Sbjct: 23 ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTER---PEPIQALNDLHVDLV 79
Query: 125 FASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
S A+ G ++ WG GQLG+G+ + +P++++ALAG KI++VS G H+
Sbjct: 80 SCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHS 139
Query: 185 LAQTEDGKLFGWGYSADGRIG---NLG--------KALESSPL------DSNXXXXXXXX 227
LA +EDG +F WG +++G++G N K+LE PL ++
Sbjct: 140 LALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTG 199
Query: 228 XXXXXXXXXKAQKLVSEGMEKEKYMPIIWEPFLV---EGVEVVDIACGFDHSLVLGRNGV 284
Q +S KE+ I++P + + + V+ I+CG++H+ VL G
Sbjct: 200 TSFGWGSNRSGQLALSGNKVKEQ----IYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 255
Query: 285 LLSCGSNVYGQL 296
+ + G N GQL
Sbjct: 256 VFTFGGNSSGQL 267
Score = 237 (88.5 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 59/188 (31%), Positives = 94/188 (50%)
Query: 25 SGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGA 84
S V S GD S G LG + + EP + V VS G HS+AV + G
Sbjct: 39 SNHRVYSCGDNSWGQLGQRRDQST---ERPEPIQALN-DLHVDLVSCGKEHSVAVCHKGK 94
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
V+AWG +E QLG G + + P +++ L + + S A+ +DG ++ WG
Sbjct: 95 VFAWGAGSEGQLGIGEFKEISFM--PTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWG 152
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
++ GQLGLGK+ +P +V++L G + +V+ G H+ A + G FGWG + G++
Sbjct: 153 RNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL 212
Query: 205 GNLGKALE 212
G ++
Sbjct: 213 ALSGNKVK 220
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 238 (88.8 bits), Expect = 6.8e-19, P = 6.8e-19
Identities = 70/191 (36%), Positives = 96/191 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V+S G + G LG+P P + L V V+AG H+LA T+ G+ + W
Sbjct: 122 VLSCGSNAFGQLGVPHGPR----KCVVPQAIECLREKVVCVAAGLRHALATTDTGSTFQW 177
Query: 89 GR---NNEVQLGRGA-LESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
G ++ +L G L T +P RV GL+ V A A S+++ D G L+VWG
Sbjct: 178 GTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWG 237
Query: 145 KSKRGQLGLGKDITEAIVPSRVEA--LAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADG 202
++K GQL T +P RVEA EK+ V GW H +A+TE GK+F WG AD
Sbjct: 238 RNKHGQLA--SLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWG-RAD- 293
Query: 203 RIGNLGKALES 213
G LG+ L S
Sbjct: 294 -YGQLGRTLGS 303
Score = 165 (63.1 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 56/186 (30%), Positives = 87/186 (46%)
Query: 23 SASGTAVV-SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VTSVSAGHYHSLAV 79
+ S AV+ ++G S G LGL G D P ++ + SV+ G HS+ V
Sbjct: 10 AVSAAAVLFAWGANSYGQLGL-----GHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVV 64
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T+ G ++ G N + QLG G E + K + G V + ++ + + G
Sbjct: 65 TDGGGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIM---LTEKGQ 121
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG-- 197
+ G + GQLG+ + +VP +E L EK+V V+ G HALA T+ G F WG
Sbjct: 122 VLSCGSNAFGQLGVPHGPRKCVVPQAIECLR-EKVVCVAAGLRHALATTDTGSTFQWGTG 180
Query: 198 YSADGR 203
++ GR
Sbjct: 181 LASSGR 186
Score = 136 (52.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 42/132 (31%), Positives = 67/132 (50%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVN-VCAAFASGVVSSAI 134
S AV+ ++AWG N+ QLG G E P+++ + + + G S +
Sbjct: 8 SEAVSAAAVLFAWGANSYGQLGLGHKEDVLL---PQQLSDFCKSGCIKSVTGGGGHSVVV 64
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGWGHALAQTEDGKL 193
D G L+V G +K GQLGLG TE ++ + + L G I +V+ GW + TE G++
Sbjct: 65 TDGGGLFVCGLNKDGQLGLGH--TEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQV 122
Query: 194 FGWGYSADGRIG 205
G +A G++G
Sbjct: 123 LSCGSNAFGQLG 134
Score = 117 (46.2 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 39/120 (32%), Positives = 58/120 (48%)
Query: 255 IWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMG-MFPVDINF- 312
I +P L G + +ACG+D +++L G +LSCGSN +GQLG + P I
Sbjct: 94 ICKPLL--GCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECL 151
Query: 313 --HPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGP-DNVPLVVEGLE 369
V +++GL H+LA + TG WG +S R+ P N+PL + E
Sbjct: 152 REKVVCVAAGLRHALATTD------TGST---FQWGTGLASSGRRLCPGQNLPLFLTAKE 202
Score = 113 (44.8 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 28/83 (33%), Positives = 44/83 (53%)
Query: 131 SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVK-VSFGWGHALAQTE 189
S A+ L+ WG + GQLGLG + ++P ++ +K V+ G GH++ T+
Sbjct: 8 SEAVSAAAVLFAWGANSYGQLGLGHK-EDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTD 66
Query: 190 DGKLFGWGYSADGRIGNLGKALE 212
G LF G + DG++G LG E
Sbjct: 67 GGGLFVCGLNKDGQLG-LGHTEE 88
Score = 67 (28.6 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 33/108 (30%), Positives = 44/108 (40%)
Query: 257 EPFLVEGVEVVDIAC---GFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH 313
EP V G+E + C G DHS L G L G N +GQL + + P + H
Sbjct: 202 EPSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWGRNKHGQLASLATFLPL-PQRVEAH 260
Query: 314 ------PVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGR 355
++ SG H +A E TG + +WG QLGR
Sbjct: 261 YFQDEKVTAVWSGWTHLVAKTE------TGK---VFTWGRADYGQLGR 299
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 192 (72.6 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 56/175 (32%), Positives = 85/175 (48%)
Query: 42 LPTSLTGV---GGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW-----GRNNE 93
+P L+ V GG P R+P L ++V V+AG VT +G + W G
Sbjct: 313 IPPPLSSVYAWGGGLSSPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGG 372
Query: 94 VQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGL 153
L GA+E + +EG V + + ++ + D G + +G G LG
Sbjct: 373 TLLP-GAVELPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGH 431
Query: 154 GKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
G ++T+ P+ VEAL G ++V+V+ G H LA + DG+LF WG GR+G LG
Sbjct: 432 G-NLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLG-LG 484
Score = 155 (59.6 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 62/205 (30%), Positives = 102/205 (49%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
+++FG GS G LG +LT D +PT V L ++ V+ G H LA++ +G ++A
Sbjct: 418 IMTFGSGSNGCLG-HGNLT----DISQPTIVEALLGYEMVQVACGASHVLALSTDGELFA 472
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVE---GLD-QVNVCAAFASGVVSSAIGDDGSLWVW 143
WGR + +LG G ES N P++V G + Q VC +S +++S G +
Sbjct: 473 WGRGDGGRLGLGTRESH---NCPQQVPVAPGQEAQRVVCGIDSSMILTSP----GRVLAC 525
Query: 144 GKSKRGQLGLGK-DITEAIVP-SRVE-ALA----G------EKIVKVSFGWGHALAQTED 190
G ++ +LGL + E VP +VE AL+ G E ++ V G H+ A T
Sbjct: 526 GSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITAS 585
Query: 191 GKLFGWGYSADGRIGNLGKALESSP 215
G + +G + G++G + + +P
Sbjct: 586 GDCYTFGSNQHGQLGTSSRRVSRAP 610
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 57/203 (28%), Positives = 89/203 (43%)
Query: 17 SRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHY 74
S + S G + ++G G G LGL T +++ P +VP P + V G
Sbjct: 459 SHVLALSTDGE-LFAWGRGDGGRLGLGTR------ESHNCPQQVPVAPGQEAQRVVCGID 511
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGAL---ESRATWND--------PKRVEGLDQVNVCA 123
S+ +T+ G V A G N +LG L E + P LDQ +
Sbjct: 512 SSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLC 571
Query: 124 AFASGVVSSAIGDDGSLWVWGKSKRGQLGLG-KDITEAIVPSRVEALAGEKIVKVSFGWG 182
S+AI G + +G ++ GQLG + ++ A P RV+ L G K+V V+ G
Sbjct: 572 VDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRA--PCRVQGLEGIKMVMVACGDA 629
Query: 183 HALAQTEDGKLFGWGYSADGRIG 205
+A +G+++ WG GR+G
Sbjct: 630 FTVAVGAEGEVYSWGKGTRGRLG 652
Score = 106 (42.4 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 35/121 (28%), Positives = 55/121 (45%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD-------INFHPV 315
G E + CG D S++L G +L+CGSN + +LG + + PV ++F P+
Sbjct: 500 GQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPL 559
Query: 316 SISSGLGHSLAIC----EVRSSNVTGGARGIVSWGWNRSSQLGRMGP--DNVPLVVEGLE 369
S+ L +C S+ +T ++G N+ QLG P V+GLE
Sbjct: 560 G-SAPLDQEPLLCVDLGTAHSAAITASG-DCYTFGSNQHGQLGTSSRRVSRAPCRVQGLE 617
Query: 370 G 370
G
Sbjct: 618 G 618
Score = 105 (42.0 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM-FPVDIN-FHPVSIS 318
+EG+++V +ACG ++ +G G + S G G+LGR +D G+ PV ++ HP ++
Sbjct: 616 LEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVT 675
Query: 319 S-GLGHSLAICEVRS 332
S H + VRS
Sbjct: 676 SVSCCHGNTLLAVRS 690
Score = 81 (33.6 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 33/122 (27%), Positives = 51/122 (41%)
Query: 247 EKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF 306
E + P+ P E + VD+ G HS + +G + GSN +GQLG + +
Sbjct: 552 EALSFTPLGSAPLDQEPLLCVDL--GTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRA 609
Query: 307 PVDINFHPVSISSGLGHSLAICEVRSSNVTGGARG-IVSWGWNRSSQLGRMGPD-NVPLV 364
P + G+ + C + V GA G + SWG +LGR D +P
Sbjct: 610 PCRVQG-----LEGIKMVMVACG-DAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRP 663
Query: 365 VE 366
V+
Sbjct: 664 VQ 665
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 225 (84.3 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 63/192 (32%), Positives = 90/192 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V+S G S G LG+P P + V ++AG H++A T +G V+ W
Sbjct: 8 VLSCGSNSFGQLGVPHGPRR----CVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQW 63
Query: 89 GRNNEVQLGRGALESRA-----TWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
G GR + T +P RV GL+ A S+++ D G ++VW
Sbjct: 64 G-TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVW 122
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEA--LAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD 201
G +K GQL + VP ++EA EK+ + GW H +AQTE GK+F WG AD
Sbjct: 123 GSNKHGQLA--NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWG-RAD 179
Query: 202 GRIGNLGKALES 213
G LG+ LE+
Sbjct: 180 --YGQLGRKLET 189
Score = 97 (39.2 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
++G + G + GQLG+ +VP +E L EK+V ++ G HA+A T G +F
Sbjct: 4 ENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQ 62
Query: 196 WG 197
WG
Sbjct: 63 WG 64
Score = 70 (29.7 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 36/108 (33%), Positives = 45/108 (41%)
Query: 257 EPFLVEGVEVVDIAC---GFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH 313
EP V G+E C G DHS L G + GSN +GQL E + + P I H
Sbjct: 88 EPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPV-PQKIEAH 146
Query: 314 ------PVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGR 355
+I SG H +A E TG + +WG QLGR
Sbjct: 147 CFQNEKVTAIWSGWTHLVAQTE------TGK---MFTWGRADYGQLGR 185
Score = 52 (23.4 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 257 EPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
E + +V I G+ H + G + + G YGQLGR+
Sbjct: 144 EAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRK 186
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 228 (85.3 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 86/332 (25%), Positives = 147/332 (44%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT---SVSAGHYH 75
+F + G V + G+ + G LGL S G P ++ L S V +V +G H
Sbjct: 2925 LFAVTVEGK-VYACGEATNGRLGLGIS----SGTVPIPRQITALSSYVVKKVAVHSGGRH 2979
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+ A+T +G V++WG ++ +LG SR + P+ +E L + S+A+
Sbjct: 2980 ATALTVDGKVFSWGEGDDGKLGHF---SRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3036
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKL 193
G L+ WG + G+LG G + T+ + P V+ L G ++++V+ G A LA T++G +
Sbjct: 3037 SSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 3095
Query: 194 FGWGYSADGRIGNLGKA-LESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGME----K 248
F WG DG G LG+ E + N + L G+ K
Sbjct: 3096 FSWG---DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3152
Query: 249 EKYMPI-------IWEPFLVEGV---EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
Y + + +P +VEG+ ++V +A G H L + G + + G N +GQ G
Sbjct: 3153 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGN 3212
Query: 299 EKQDMGMFPV---DINFHPVS-ISSGLGHSLA 326
+ P + ++ ++ G HS+A
Sbjct: 3213 GTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3244
Score = 223 (83.6 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 61/178 (34%), Positives = 88/178 (49%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVS--AGHYHSLAV 79
+A G + ++G G+ G LG G D P V GL V V+ +G +LAV
Sbjct: 478 TAEGE-LYTWGRGNYGRLG-----HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAV 531
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T NG VW+WG + +LGRG + T PK +E L ++V S A+ DG
Sbjct: 532 TENGQVWSWGDGDYGKLGRGGSDGCKT---PKLIEKLQDLDVVKVRCGSQFSVALTKDGQ 588
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
++ WGK +LG G + P +E L G+K++ V+ G H LA TED ++ WG
Sbjct: 589 VYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 645
Score = 217 (81.4 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 80/286 (27%), Positives = 126/286 (44%)
Query: 34 DGSQGALGLPTS-LTGVGG--DAYEPTRVPGLPS---DVTSVSAGHYHSLAVTNNGAVWA 87
DG A G GVGG PT + + +V++G H LA+++ G V++
Sbjct: 3926 DGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 3985
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG + +LG G +R+ + P+ +E L V A G S+ + G L+ WGK +
Sbjct: 3986 WGEAEDGKLGHG---NRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGR 4042
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKLFGWGYSADGRIG 205
G+LG D + + P VEAL G ++V V+ G G A L T+D ++ WG G++G
Sbjct: 4043 YGRLG-HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4101
Query: 206 NLGKALESSPL--DS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPI------- 254
G P+ DS K+ + + G K Y +
Sbjct: 4102 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDH 4159
Query: 255 IWEPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+ P V+G++ V+ IA G H + +G + + G N GQLG
Sbjct: 4160 VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG 4205
Score = 205 (77.2 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 85/317 (26%), Positives = 141/317 (44%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+L+ +G ++ WG N+ QLG +E A P E L + A+
Sbjct: 3868 TLSAGGSGTIYGWGHNHRGQLG--GIEG-AKVKVPTPCEALAALRPVQLIGGEQTLFAVT 3924
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWG--HALAQTEDGK 192
DG L+ G G+LG+G TE++ P+ +E++ I KV+ G H LA + +G+
Sbjct: 3925 ADGKLYATGYGAGGRLGVGG--TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3982
Query: 193 LFGWGYSADGRIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEK 248
++ WG + DG++G+ ++ P ++S A L + G K
Sbjct: 3983 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWG--K 4040
Query: 249 EKYMPI-------IWEPFLVEGVE---VVDIACGFD--HSLVLGRNGVLLSCGSNVYGQL 296
+Y + +P LVE ++ VVD+ACG +L L + + S G YG+L
Sbjct: 4041 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4100
Query: 297 GREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM 356
GR D P+ I+ S++ GLG C + S + + +WG +LG
Sbjct: 4101 GRGGSDGCKVPMKID----SLT-GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4155
Query: 357 GPDNV--PLVVEGLEGE 371
D+V P V+GL+G+
Sbjct: 4156 SDDHVRRPRQVQGLQGK 4172
Score = 198 (74.8 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 52/187 (27%), Positives = 94/187 (50%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVS--AGHYHSLAV 79
+A+G + ++G G G LG S D +P V L V V+ +G +L +
Sbjct: 4030 TAAGD-LYTWGKGRYGRLGHSDS-----EDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4083
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T++ VW+WG + +LGRG + P +++ L + V S A+ G+
Sbjct: 4084 TDDDTVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLTGLGVVKVECGSQFSVALTKSGA 4140
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
++ WGK +LG G D P +V+ L G+K++ ++ G H + +EDG+++ WG +
Sbjct: 4141 VYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDN 4199
Query: 200 ADGRIGN 206
+G++G+
Sbjct: 4200 DEGQLGD 4206
Score = 195 (73.7 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 56/186 (30%), Positives = 87/186 (46%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNN 82
+A+G V S+G G G LG ++ V ++ G +S A+T
Sbjct: 422 AATGE-VYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 480
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC-AAFASGVVSS-AIGDDGSL 140
G ++ WGR N +LG G+ E A P V GL + V A SG + A+ ++G +
Sbjct: 481 GELYTWGRGNYGRLGHGSSEDEAI---PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQV 537
Query: 141 WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
W WG G+LG G P +E L +VKV G ++A T+DG+++ WG
Sbjct: 538 WSWGDGDYGKLGRGGS-DGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGD 596
Query: 201 DGRIGN 206
+ R+G+
Sbjct: 597 NQRLGH 602
Score = 195 (73.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 83/314 (26%), Positives = 135/314 (42%)
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDD 137
A T V+ WG N++ QLG G S+ P E L +NV A+ +
Sbjct: 2875 AATIRTKVFVWGLNDKDQLG-GLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 2931
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFG 195
G ++ G++ G+LGLG +P ++ AL+ + KV+ G HA A T DGK+F
Sbjct: 2932 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2991
Query: 196 WGYSADGRIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKY 251
WG DG++G+ + P +++ + +L + G+ +
Sbjct: 2992 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3051
Query: 252 M-----PIIWEPFLVE---GVEVVDIACGF-D-HSLVLGRNGVLLSCGSNVYGQLGREKQ 301
+ +P +V+ G V+ +ACG D +L L G++ S G +G+LGR
Sbjct: 3052 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3111
Query: 302 DMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSS--QLGRMGPD 359
+ P +I +G G C + S + G+V W W + +LG
Sbjct: 3112 EGCNIPQNIER-----LNGQGVCQIECGAQFSLALTKS-GVV-WTWGKGDYFRLGHGSDV 3164
Query: 360 NV--PLVVEGLEGE 371
+V P VVEGL G+
Sbjct: 3165 HVRKPQVVEGLRGK 3178
Score = 194 (73.4 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 56/161 (34%), Positives = 81/161 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG G G D + P ++ L V V G S+A+T +GAV+
Sbjct: 4089 VWSWGDGDYGKLG-----RG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 4142
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG+ + +LG G+ + P++V+GL V A + +DG ++ WG +
Sbjct: 4143 TWGKGDYHRLGHGS-DDHV--RRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDN 4199
Query: 147 KRGQLGLGKDITEAIV-PSRVEALAGEKIVKVSFGWGHALA 186
GQLG G T AI P V AL G+K+ +V+ G H LA
Sbjct: 4200 DEGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTLA 4238
Score = 194 (73.4 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 85/284 (29%), Positives = 119/284 (41%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
+ + S GH H LA+ G V++WG + +LG G G
Sbjct: 409 IAAHSDGH-HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHI 467
Query: 126 ASG-VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
A G S+AI +G L+ WG+ G+LG G EAI P V L G K++ V+ G G A
Sbjct: 468 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 526
Query: 185 --LAQTEDGKLFGWG---YSADGRIGNLG----KALES-SPLD-------SNXXXXXXXX 227
LA TE+G+++ WG Y GR G+ G K +E LD S
Sbjct: 527 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD 586
Query: 228 XXXXXXXXXKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLS 287
Q+L G E+ P + E ++G +V+D+A G H L L + + S
Sbjct: 587 GQVYSWGKGDNQRL-GHGTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCLALTEDSEVHS 643
Query: 288 CGSNVYGQ----LGREKQDMGMFP-VDINFHPVSISSGLGHSLA 326
GSN Q L K + P +D H V I+ G S A
Sbjct: 644 WGSNDQCQHFDTLRVTKPEPSALPGLDTK-HIVGIACGPAQSFA 686
Score = 184 (69.8 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 51/161 (31%), Positives = 73/161 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V S+GDG G LG G P + L V + G SLA+T +G VW
Sbjct: 3095 VFSWGDGDFGKLG-----RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3149
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG+ + +LG G S P+ VEGL + + A+ D G ++ WG +
Sbjct: 3150 WGKGDYFRLGHG---SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDND 3206
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT 188
GQ G G P+ V+ L G+KI +V+ G H++A T
Sbjct: 3207 HGQQGNGTTTVNR-KPTLVQGLEGQKITRVACGSSHSVAWT 3246
Score = 165 (63.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 54/189 (28%), Positives = 89/189 (47%)
Query: 23 SASGTAVV-SFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAV 79
SA G+ + +G +G LG G+ G + PT L + + G AV
Sbjct: 3870 SAGGSGTIYGWGHNHRGQLG------GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAV 3923
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--CAAFASGVVSSAIGDD 137
T +G ++A G +LG G ES +T P +E + V + A + G A+ +
Sbjct: 3924 TADGKLYATGYGAGGRLGVGGTESVST---PTLLESIQHVFIKKVAVNSGGKHCLALSSE 3980
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG+++ G+LG G + P +E+L G ++V V+ G H+ T G L+ WG
Sbjct: 3981 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWG 4039
Query: 198 YSADGRIGN 206
GR+G+
Sbjct: 4040 KGRYGRLGH 4048
Score = 158 (60.7 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 45/153 (29%), Positives = 72/153 (47%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVC 122
+V V+ G AVT G V+A G +LG G S T P+++ L V
Sbjct: 2914 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI--SSGTVPIPRQITALSSYVVKKV 2971
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
A + G ++A+ DG ++ WG+ G+LG + P +EAL ++I ++ G
Sbjct: 2972 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSS 3030
Query: 183 HALAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
H+ A T G+L+ WG GR+G+ + P
Sbjct: 3031 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKP 3063
Score = 123 (48.4 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 44/168 (26%), Positives = 75/168 (44%)
Query: 56 PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P + GL + VT ++ L ++ NG V+ N++ P+ V+
Sbjct: 353 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLA-------------PQLVQ 399
Query: 115 GLDQVNVC--AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEAL--- 169
GL N+ AA + G A+ G ++ WG G+LG G D P + A
Sbjct: 400 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG-DTVPLEEPKVISAFSGK 458
Query: 170 -AGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPL 216
AG+ +V ++ G ++ A T +G+L+ WG GR+G+ E+ P+
Sbjct: 459 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 506
Score = 86 (35.3 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 34/118 (28%), Positives = 52/118 (44%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSG 320
+ G V I CG SL L ++GV+ + G Y +LG D++ + G
Sbjct: 3123 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEG 3174
Query: 321 L-GHSL---AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
L G + A+ + VT + + +WG N Q G G V P +V+GLEG+
Sbjct: 3175 LRGKKIVHVAVGALHCLAVTDAGQ-VYAWGDNDHGQQGN-GTTTVNRKPTLVQGLEGQ 3230
Score = 77 (32.2 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 31/116 (26%), Positives = 50/116 (43%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVSIS 318
G+ VV + CG S+ L ++G + + G Y +LG D P + ++I+
Sbjct: 4119 GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4178
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
+G H + E G + +WG N QLG G N P +V L+G+
Sbjct: 4179 TGSLHCVCCSE-------DGE--VYTWGDNDEGQLGD-GTTNAIQRPRLVAALQGK 4224
Score = 43 (20.2 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 274 DHSLVLGRNGVLLSCGSNVYGQLG 297
D +L G +G + G N GQLG
Sbjct: 3866 DWTLSAGGSGTIYGWGHNHRGQLG 3889
Score = 38 (18.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 261 VEGVEVVDIACGFDHSL 277
++G +V +ACG H+L
Sbjct: 4221 LQGKKVNRVACGSAHTL 4237
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 234 (87.4 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 87/332 (26%), Positives = 148/332 (44%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT---SVSAGHYH 75
+F + G V S G+ + G LGL S G P ++ L S V +V +G H
Sbjct: 2948 LFAVTVEGK-VYSCGEATNGRLGLGMS----SGTVPIPRQITALSSYVVKKVAVHSGGRH 3002
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+ A+T +G V++WG ++ +LG SR + P+ +E L + S+A+
Sbjct: 3003 ATALTVDGKVFSWGEGDDGKLGHF---SRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3059
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKL 193
G L+ WG + G+LG G + T+ + P V+ L G ++++V+ G A LA T++G +
Sbjct: 3060 SSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 3118
Query: 194 FGWGYSADGRIGNLGKA-LESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGME----K 248
F WG DG G LG+ E + N + L G+ K
Sbjct: 3119 FSWG---DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3175
Query: 249 EKYMPI-------IWEPFLVEGV---EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
Y + + +P +VEG+ ++V +A G H L + +G + + G N +GQ G
Sbjct: 3176 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGN 3235
Query: 299 EKQDMGMFPV---DINFHPVS-ISSGLGHSLA 326
+ P + ++ ++ G HS+A
Sbjct: 3236 GTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3267
Score = 223 (83.6 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 61/178 (34%), Positives = 88/178 (49%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVS--AGHYHSLAV 79
+A G + ++G G+ G LG G D P V GL V V+ +G +LAV
Sbjct: 513 TAEGE-LYTWGRGNYGRLG-----HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAV 566
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T NG VW+WG + +LGRG + T PK +E L ++V S A+ DG
Sbjct: 567 TENGQVWSWGDGDYGKLGRGGSDGCKT---PKLIEKLQDLDVIKVRCGSQFSIALTKDGQ 623
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
++ WGK +LG G + P +E L G+K++ V+ G H LA TED ++ WG
Sbjct: 624 VYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680
Score = 215 (80.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 77/286 (26%), Positives = 127/286 (44%)
Query: 34 DGSQGALGLPTS-LTGVGG--DAYEPTRVPGLPS---DVTSVSAGHYHSLAVTNNGAVWA 87
DG A G G+GG PT + + +V++G H LA+++ G V++
Sbjct: 3948 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4007
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG + +LG G +R+ + P+ +E L + V A G S+ + G L+ WGK +
Sbjct: 4008 WGEAEDGKLGHG---NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4064
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKLFGWGYSADGRIG 205
G+LG D + + P VEAL G +++ ++ G G A L T+D ++ WG G++G
Sbjct: 4065 YGRLG-HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4123
Query: 206 NLGKALESSPL--DS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPI------- 254
G P+ DS K+ + + G K Y +
Sbjct: 4124 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDH 4181
Query: 255 IWEPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+ P V+G++ V+ IA G H + +G + + G N GQLG
Sbjct: 4182 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4227
Score = 205 (77.2 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 85/317 (26%), Positives = 141/317 (44%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+L+ +G ++ WG N+ QLG +E A P E L + A+
Sbjct: 3890 TLSAGGSGTIYGWGHNHRGQLG--GIEG-AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3946
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWG--HALAQTEDGK 192
DG L+ G G+LG+G TE++ P+ +E++ I KV+ G H LA + +G+
Sbjct: 3947 ADGKLYATGYGAGGRLGIGG--TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4004
Query: 193 LFGWGYSADGRIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEK 248
++ WG + DG++G+ ++ P ++S A L + G K
Sbjct: 4005 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG--K 4062
Query: 249 EKYMPI-------IWEPFLVEGVE---VVDIACGFD--HSLVLGRNGVLLSCGSNVYGQL 296
+Y + +P LVE ++ V+DIACG +L L + + S G YG+L
Sbjct: 4063 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4122
Query: 297 GREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM 356
GR D P+ I+ S++ GLG C + S + + +WG +LG
Sbjct: 4123 GRGGSDGCKVPMKID----SLT-GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4177
Query: 357 GPDNV--PLVVEGLEGE 371
D+V P V+GL+G+
Sbjct: 4178 SDDHVRRPRQVQGLQGK 4194
Score = 200 (75.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 52/187 (27%), Positives = 94/187 (50%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVS--AGHYHSLAV 79
+A+G + ++G G G LG S D +P V L V ++ +G +L +
Sbjct: 4052 TAAGD-LYTWGKGRYGRLGHSDS-----EDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4105
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T++ VW+WG + +LGRG + P +++ L + V S A+ G+
Sbjct: 4106 TDDDTVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLTGLGVVKVECGSQFSVALTKSGA 4162
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
++ WGK +LG G D P +V+ L G+K++ ++ G H + TEDG+++ WG +
Sbjct: 4163 VYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4221
Query: 200 ADGRIGN 206
+G++G+
Sbjct: 4222 DEGQLGD 4228
Score = 195 (73.7 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 55/186 (29%), Positives = 87/186 (46%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNN 82
+A+G V S+G G G LG ++ V ++ G +S A+T
Sbjct: 457 AATGE-VYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 515
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC-AAFASGVVSS-AIGDDGSL 140
G ++ WGR N +LG G+ E A P V GL + V A SG + A+ ++G +
Sbjct: 516 GELYTWGRGNYGRLGHGSSEDEAI---PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQV 572
Query: 141 WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
W WG G+LG G P +E L ++KV G ++A T+DG+++ WG
Sbjct: 573 WSWGDGDYGKLGRGGS-DGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGD 631
Query: 201 DGRIGN 206
+ R+G+
Sbjct: 632 NQRLGH 637
Score = 192 (72.6 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 56/161 (34%), Positives = 81/161 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG G G D + P ++ L V V G S+A+T +GAV+
Sbjct: 4111 VWSWGDGDYGKLG-----RG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 4164
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG+ + +LG G+ + P++V+GL V A + +DG ++ WG +
Sbjct: 4165 TWGKGDYHRLGHGS-DDHV--RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4221
Query: 147 KRGQLGLGKDITEAIV-PSRVEALAGEKIVKVSFGWGHALA 186
GQLG G T AI P V AL G+K+ +V+ G H LA
Sbjct: 4222 DEGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTLA 4260
Score = 192 (72.6 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 85/284 (29%), Positives = 119/284 (41%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
+ + S GH H LA+ G V++WG + +LG G G
Sbjct: 444 IAAHSDGH-HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHI 502
Query: 126 ASG-VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
A G S+AI +G L+ WG+ G+LG G EAI P V L G K++ V+ G G A
Sbjct: 503 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 561
Query: 185 --LAQTEDGKLFGWG---YSADGRIGNLG----KALES-SPLD-------SNXXXXXXXX 227
LA TE+G+++ WG Y GR G+ G K +E LD S
Sbjct: 562 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD 621
Query: 228 XXXXXXXXXKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLS 287
Q+L G E+ P + E ++G +V+D+A G H L L + + S
Sbjct: 622 GQVYSWGKGDNQRL-GHGTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCLALTEDSEVHS 678
Query: 288 CGSNVYGQ----LGREKQDMGMFP-VDINFHPVSISSGLGHSLA 326
GSN Q L K + P +D H V I+ G S A
Sbjct: 679 WGSNDQCQHFDTLRVTKPEPTALPGLDTK-HIVGIACGPAQSFA 721
Score = 192 (72.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 81/307 (26%), Positives = 133/307 (43%)
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
V+ WG N++ QLG G S+ P E L +NV A+ +G ++ G
Sbjct: 2905 VFVWGLNDKDQLG-GLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCG 2961
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFGWGYSADG 202
++ G+LGLG +P ++ AL+ + KV+ G HA A T DGK+F WG DG
Sbjct: 2962 EATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDG 3021
Query: 203 RIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYM-----P 253
++G+ + P +++ + +L + G+ + +
Sbjct: 3022 KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNT 3081
Query: 254 IIWEPFLVE---GVEVVDIACGF-D-HSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPV 308
+P +V+ G V+ +ACG D +L L G++ S G +G+LGR + P
Sbjct: 3082 TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3141
Query: 309 DINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSS--QLGRMGPDNV--PLV 364
+I +G G C + S + G+V W W + +LG +V P V
Sbjct: 3142 NIER-----LNGQGVCQIECGAQFSLALTKS-GVV-WTWGKGDYFRLGHGSDVHVRKPQV 3194
Query: 365 VEGLEGE 371
VEGL G+
Sbjct: 3195 VEGLRGK 3201
Score = 186 (70.5 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 51/161 (31%), Positives = 73/161 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V S+GDG G LG G P + L V + G SLA+T +G VW
Sbjct: 3118 VFSWGDGDFGKLG-----RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3172
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG+ + +LG G S P+ VEGL + + A+ D G ++ WG +
Sbjct: 3173 WGKGDYFRLGHG---SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDND 3229
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT 188
GQ G G P+ V+ L G+KI +V+ G H++A T
Sbjct: 3230 HGQQGNGTTTVNR-KPTLVQGLEGQKITRVACGSSHSVAWT 3269
Score = 163 (62.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 54/189 (28%), Positives = 89/189 (47%)
Query: 23 SASGTAVV-SFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAV 79
SA G+ + +G +G LG G+ G + PT L + + G AV
Sbjct: 3892 SAGGSGTIYGWGHNHRGQLG------GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV 3945
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--CAAFASGVVSSAIGDD 137
T +G ++A G +LG G ES +T P +E + V + A + G A+ +
Sbjct: 3946 TADGKLYATGYGAGGRLGIGGTESVST---PTLLESIQHVFIKKVAVNSGGKHCLALSSE 4002
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG+++ G+LG G + P +E+L G ++V V+ G H+ T G L+ WG
Sbjct: 4003 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4061
Query: 198 YSADGRIGN 206
GR+G+
Sbjct: 4062 KGRYGRLGH 4070
Score = 155 (59.6 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVC 122
+V V+ G AVT G V++ G +LG G S T P+++ L V
Sbjct: 2937 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGM--SSGTVPIPRQITALSSYVVKKV 2994
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
A + G ++A+ DG ++ WG+ G+LG + P +EAL ++I ++ G
Sbjct: 2995 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSS 3053
Query: 183 HALAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
H+ A T G+L+ WG GR+G+ + P
Sbjct: 3054 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKP 3086
Score = 122 (48.0 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 45/168 (26%), Positives = 75/168 (44%)
Query: 56 PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P + GL S V V+ L ++ NG V+ N+++ P+ V+
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLA-------------PQLVQ 434
Query: 115 GLDQVNVC--AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEAL--- 169
GL N+ AA + G A+ G ++ WG G+LG G D P + A
Sbjct: 435 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG-DTVPLEEPKVISAFSGK 493
Query: 170 -AGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPL 216
AG+ +V ++ G ++ A T +G+L+ WG GR+G+ E+ P+
Sbjct: 494 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 541
Score = 86 (35.3 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 34/118 (28%), Positives = 52/118 (44%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSG 320
+ G V I CG SL L ++GV+ + G Y +LG D++ + G
Sbjct: 3146 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEG 3197
Query: 321 L-GHSL---AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
L G + A+ + VT + + +WG N Q G G V P +V+GLEG+
Sbjct: 3198 LRGKKIVHVAVGALHCLAVTDSGQ-VYAWGDNDHGQQGN-GTTTVNRKPTLVQGLEGQ 3253
Score = 79 (32.9 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 31/116 (26%), Positives = 49/116 (42%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVSIS 318
G+ VV + CG S+ L ++G + + G Y +LG D P + ++I+
Sbjct: 4141 GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4200
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
+G H +C V +WG N QLG G N P +V L+G+
Sbjct: 4201 TGSLH--CVCCTEDGEV-------YTWGDNDEGQLGD-GTTNAIQRPRLVAALQGK 4246
Score = 43 (20.2 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 274 DHSLVLGRNGVLLSCGSNVYGQLG 297
D +L G +G + G N GQLG
Sbjct: 3888 DWTLSAGGSGTIYGWGHNHRGQLG 3911
Score = 38 (18.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 261 VEGVEVVDIACGFDHSL 277
++G +V +ACG H+L
Sbjct: 4243 LQGKKVNRVACGSAHTL 4259
Score = 37 (18.1 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 5/9 (55%), Positives = 6/9 (66%)
Query: 86 WAWGRNNEV 94
W WGR +V
Sbjct: 47 WVWGRQPDV 55
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 231 (86.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 86/332 (25%), Positives = 148/332 (44%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT---SVSAGHYH 75
+F + G V + G+ + G LGL S G P ++ L S V +V +G H
Sbjct: 3004 LFAVTVEGK-VYACGEATNGRLGLGIS----SGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+ A+T +G V++WG ++ +LG SR + P+ +E L + S+A+
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHF---SRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3115
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKL 193
G L+ WG + G+LG G + T+ + P V+ L G ++++V+ G A LA T++G +
Sbjct: 3116 SSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 3174
Query: 194 FGWGYSADGRIGNLGKA-LESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGME----K 248
F WG DG G LG+ E + N + L G+ K
Sbjct: 3175 FSWG---DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3231
Query: 249 EKYMPI-------IWEPFLVEGV---EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
Y + + +P +VEG+ ++V +A G H L + +G + + G N +GQ G
Sbjct: 3232 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGN 3291
Query: 299 EKQDMGMFPV---DINFHPVS-ISSGLGHSLA 326
+ P + ++ ++ G HS+A
Sbjct: 3292 GTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 223 (83.6 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 61/178 (34%), Positives = 88/178 (49%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVS--AGHYHSLAV 79
+A G + ++G G+ G LG G D P V GL V V+ +G +LAV
Sbjct: 567 TAEGE-LYTWGRGNYGRLG-----HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T NG VW+WG + +LGRG + T PK +E L ++V S A+ DG
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKT---PKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 677
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
++ WGK +LG G + P +E L G+K++ V+ G H LA TED ++ WG
Sbjct: 678 VYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 216 (81.1 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 78/286 (27%), Positives = 127/286 (44%)
Query: 34 DGSQGALGLPTS-LTGVGG--DAYEPTRVPGLPS---DVTSVSAGHYHSLAVTNNGAVWA 87
DG A G G+GG PT + + +V++G H LA+++ G V++
Sbjct: 4003 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4062
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG + +LG G +R+ + P+ +E L + V A G S+ + G L+ WGK +
Sbjct: 4063 WGEAEDGKLGHG---NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4119
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKLFGWGYSADGRIG 205
G+LG D + + P VEAL G ++V ++ G G A L T+D ++ WG G++G
Sbjct: 4120 YGRLG-HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178
Query: 206 NLGKALESSPL--DS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPI------- 254
G P+ DS K+ + + G K Y +
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDH 4236
Query: 255 IWEPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+ P V+G++ V+ IA G H + +G + + G N GQLG
Sbjct: 4237 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 206 (77.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 86/317 (27%), Positives = 141/317 (44%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+L+ +G ++ WG N+ QLG +E A P E L + A+
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLG--GIEG-AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWG--HALAQTEDGK 192
DG L+ G G+LG+G TE++ P+ +E++ I KV+ G H LA + +G+
Sbjct: 4002 ADGKLYATGYGAGGRLGIGG--TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4059
Query: 193 LFGWGYSADGRIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEK 248
++ WG + DG++G+ ++ P ++S A L + G K
Sbjct: 4060 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG--K 4117
Query: 249 EKYMPI-------IWEPFLVEGVE---VVDIACGFD--HSLVLGRNGVLLSCGSNVYGQL 296
+Y + +P LVE ++ VVDIACG +L L + + S G YG+L
Sbjct: 4118 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4177
Query: 297 GREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM 356
GR D P+ I+ S++ GLG C + S + + +WG +LG
Sbjct: 4178 GRGGSDGCKVPMKID----SLT-GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Query: 357 GPDNV--PLVVEGLEGE 371
D+V P V+GL+G+
Sbjct: 4233 SDDHVRRPRQVQGLQGK 4249
Score = 201 (75.8 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 52/187 (27%), Positives = 94/187 (50%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVS--AGHYHSLAV 79
+A+G + ++G G G LG S D +P V L V ++ +G +L +
Sbjct: 4107 TAAGD-LYTWGKGRYGRLGHSDS-----EDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T++ VW+WG + +LGRG + P +++ L + V S A+ G+
Sbjct: 4161 TDDDTVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLTGLGVVKVECGSQFSVALTKSGA 4217
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
++ WGK +LG G D P +V+ L G+K++ ++ G H + TEDG+++ WG +
Sbjct: 4218 VYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4276
Query: 200 ADGRIGN 206
+G++G+
Sbjct: 4277 DEGQLGD 4283
Score = 196 (74.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 56/186 (30%), Positives = 87/186 (46%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNN 82
+A+G V S+G G G LG ++ V ++ G +S A+T
Sbjct: 511 AATGE-VYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 569
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC-AAFASGVVSS-AIGDDGSL 140
G ++ WGR N +LG G+ E A P V GL + V A SG + A+ ++G +
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAI---PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQV 626
Query: 141 WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
W WG G+LG G P +E L +VKV G ++A T+DG+++ WG
Sbjct: 627 WSWGDGDYGKLGRGGS-DGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 201 DGRIGN 206
+ R+G+
Sbjct: 686 NQRLGH 691
Score = 195 (73.7 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 83/314 (26%), Positives = 135/314 (42%)
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDD 137
A T V+ WG N++ QLG G S+ P E L +NV A+ +
Sbjct: 2954 AATIRTKVFVWGLNDKDQLG-GLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFG 195
G ++ G++ G+LGLG +P ++ AL+ + KV+ G HA A T DGK+F
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 196 WGYSADGRIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKY 251
WG DG++G+ + P +++ + +L + G+ +
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 252 M-----PIIWEPFLVE---GVEVVDIACGF-D-HSLVLGRNGVLLSCGSNVYGQLGREKQ 301
+ +P +V+ G V+ +ACG D +L L G++ S G +G+LGR
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 302 DMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSS--QLGRMGPD 359
+ P +I +G G C + S + G+V W W + +LG
Sbjct: 3191 EGCNIPQNIER-----LNGQGVCQIECGAQFSLALTKS-GVV-WTWGKGDYFRLGHGSDV 3243
Query: 360 NV--PLVVEGLEGE 371
+V P VVEGL G+
Sbjct: 3244 HVRKPQVVEGLRGK 3257
Score = 194 (73.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 85/284 (29%), Positives = 119/284 (41%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
+ + S GH H LA+ G V++WG + +LG G G
Sbjct: 498 IAAHSDGH-HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHI 556
Query: 126 ASG-VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
A G S+AI +G L+ WG+ G+LG G EAI P V L G K++ V+ G G A
Sbjct: 557 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 615
Query: 185 --LAQTEDGKLFGWG---YSADGRIGNLG----KALES-SPLD-------SNXXXXXXXX 227
LA TE+G+++ WG Y GR G+ G K +E LD S
Sbjct: 616 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD 675
Query: 228 XXXXXXXXXKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLS 287
Q+L G E+ P + E ++G +V+D+A G H L L + + S
Sbjct: 676 GQVYSWGKGDNQRL-GHGTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCLALTEDSEVHS 732
Query: 288 CGSNVYGQ----LGREKQDMGMFP-VDINFHPVSISSGLGHSLA 326
GSN Q L K + P +D H V I+ G S A
Sbjct: 733 WGSNDQCQHFDTLRVTKPEPAALPGLDTK-HIVGIACGPAQSFA 775
Score = 192 (72.6 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 56/161 (34%), Positives = 81/161 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG G G D + P ++ L V V G S+A+T +GAV+
Sbjct: 4166 VWSWGDGDYGKLG-----RG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 4219
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG+ + +LG G+ + P++V+GL V A + +DG ++ WG +
Sbjct: 4220 TWGKGDYHRLGHGS-DDHV--RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4276
Query: 147 KRGQLGLGKDITEAIV-PSRVEALAGEKIVKVSFGWGHALA 186
GQLG G T AI P V AL G+K+ +V+ G H LA
Sbjct: 4277 DEGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 186 (70.5 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 51/161 (31%), Positives = 73/161 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V S+GDG G LG G P + L V + G SLA+T +G VW
Sbjct: 3174 VFSWGDGDFGKLG-----RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3228
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG+ + +LG G S P+ VEGL + + A+ D G ++ WG +
Sbjct: 3229 WGKGDYFRLGHG---SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDND 3285
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT 188
GQ G G P+ V+ L G+KI +V+ G H++A T
Sbjct: 3286 HGQQGNGTTTVNR-KPTLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 163 (62.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 54/189 (28%), Positives = 89/189 (47%)
Query: 23 SASGTAVV-SFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAV 79
SA G+ + +G +G LG G+ G + PT L + + G AV
Sbjct: 3947 SAGGSGTIYGWGHNHRGQLG------GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV 4000
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--CAAFASGVVSSAIGDD 137
T +G ++A G +LG G ES +T P +E + V + A + G A+ +
Sbjct: 4001 TADGKLYATGYGAGGRLGIGGTESVST---PTLLESIQHVFIKKVAVNSGGKHCLALSSE 4057
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG+++ G+LG G + P +E+L G ++V V+ G H+ T G L+ WG
Sbjct: 4058 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116
Query: 198 YSADGRIGN 206
GR+G+
Sbjct: 4117 KGRYGRLGH 4125
Score = 158 (60.7 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 45/153 (29%), Positives = 72/153 (47%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVC 122
+V V+ G AVT G V+A G +LG G S T P+++ L V
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI--SSGTVPIPRQITALSSYVVKKV 3050
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
A + G ++A+ DG ++ WG+ G+LG + P +EAL ++I ++ G
Sbjct: 3051 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSS 3109
Query: 183 HALAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
H+ A T G+L+ WG GR+G+ + P
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKP 3142
Score = 123 (48.4 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 44/168 (26%), Positives = 75/168 (44%)
Query: 56 PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P + GL + VT ++ L ++ NG V+ N++ P+ V+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLA-------------PQLVQ 488
Query: 115 GLDQVNVC--AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEAL--- 169
GL N+ AA + G A+ G ++ WG G+LG G D P + A
Sbjct: 489 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG-DTVPLEEPKVISAFSGK 547
Query: 170 -AGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPL 216
AG+ +V ++ G ++ A T +G+L+ WG GR+G+ E+ P+
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595
Score = 86 (35.3 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 34/118 (28%), Positives = 52/118 (44%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSG 320
+ G V I CG SL L ++GV+ + G Y +LG D++ + G
Sbjct: 3202 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEG 3253
Query: 321 L-GHSL---AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
L G + A+ + VT + + +WG N Q G G V P +V+GLEG+
Sbjct: 3254 LRGKKIVHVAVGALHCLAVTDSGQ-VYAWGDNDHGQQGN-GTTTVNRKPTLVQGLEGQ 3309
Score = 79 (32.9 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 31/116 (26%), Positives = 49/116 (42%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVSIS 318
G+ VV + CG S+ L ++G + + G Y +LG D P + ++I+
Sbjct: 4196 GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4255
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
+G H +C V +WG N QLG G N P +V L+G+
Sbjct: 4256 TGSLH--CVCCTEDGEV-------YTWGDNDEGQLGD-GTTNAIQRPRLVAALQGK 4301
Score = 43 (20.2 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 274 DHSLVLGRNGVLLSCGSNVYGQLG 297
D +L G +G + G N GQLG
Sbjct: 3943 DWTLSAGGSGTIYGWGHNHRGQLG 3966
Score = 42 (19.8 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 243 SEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLG 280
SEG + E Y P P + + V+ + G D L LG
Sbjct: 2183 SEGAQLEDYFPDSENPEVGGLMAVLAVIGGIDGRLRLG 2220
Score = 38 (18.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 261 VEGVEVVDIACGFDHSL 277
++G +V +ACG H+L
Sbjct: 4298 LQGKKVNRVACGSAHTL 4314
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 234 (87.4 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 87/332 (26%), Positives = 148/332 (44%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT---SVSAGHYH 75
+F + G V S G+ + G LGL S G P ++ L S V +V +G H
Sbjct: 3005 LFAVTVEGK-VYSCGEATNGRLGLGMS----SGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+ A+T +G V++WG ++ +LG SR + P+ +E L + S+A+
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHF---SRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3116
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKL 193
G L+ WG + G+LG G + T+ + P V+ L G ++++V+ G A LA T++G +
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 3175
Query: 194 FGWGYSADGRIGNLGKA-LESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGME----K 248
F WG DG G LG+ E + N + L G+ K
Sbjct: 3176 FSWG---DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3232
Query: 249 EKYMPI-------IWEPFLVEGV---EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
Y + + +P +VEG+ ++V +A G H L + +G + + G N +GQ G
Sbjct: 3233 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGN 3292
Query: 299 EKQDMGMFPV---DINFHPVS-ISSGLGHSLA 326
+ P + ++ ++ G HS+A
Sbjct: 3293 GTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 223 (83.6 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 61/178 (34%), Positives = 88/178 (49%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVS--AGHYHSLAV 79
+A G + ++G G+ G LG G D P V GL V V+ +G +LAV
Sbjct: 568 TAEGE-LYTWGRGNYGRLG-----HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T NG VW+WG + +LGRG + T PK +E L ++V S A+ DG
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKT---PKLIEKLQDLDVIKVRCGSQFSIALTKDGQ 678
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
++ WGK +LG G + P +E L G+K++ V+ G H LA TED ++ WG
Sbjct: 679 VYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 215 (80.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 77/286 (26%), Positives = 127/286 (44%)
Query: 34 DGSQGALGLPTS-LTGVGG--DAYEPTRVPGLPS---DVTSVSAGHYHSLAVTNNGAVWA 87
DG A G G+GG PT + + +V++G H LA+++ G V++
Sbjct: 4005 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4064
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG + +LG G +R+ + P+ +E L + V A G S+ + G L+ WGK +
Sbjct: 4065 WGEAEDGKLGHG---NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4121
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKLFGWGYSADGRIG 205
G+LG D + + P VEAL G +++ ++ G G A L T+D ++ WG G++G
Sbjct: 4122 YGRLG-HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180
Query: 206 NLGKALESSPL--DS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPI------- 254
G P+ DS K+ + + G K Y +
Sbjct: 4181 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDH 4238
Query: 255 IWEPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+ P V+G++ V+ IA G H + +G + + G N GQLG
Sbjct: 4239 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4284
Score = 205 (77.2 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 85/317 (26%), Positives = 141/317 (44%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+L+ +G ++ WG N+ QLG +E A P E L + A+
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLG--GIEG-AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWG--HALAQTEDGK 192
DG L+ G G+LG+G TE++ P+ +E++ I KV+ G H LA + +G+
Sbjct: 4004 ADGKLYATGYGAGGRLGIGG--TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4061
Query: 193 LFGWGYSADGRIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEK 248
++ WG + DG++G+ ++ P ++S A L + G K
Sbjct: 4062 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG--K 4119
Query: 249 EKYMPI-------IWEPFLVEGVE---VVDIACGFD--HSLVLGRNGVLLSCGSNVYGQL 296
+Y + +P LVE ++ V+DIACG +L L + + S G YG+L
Sbjct: 4120 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4179
Query: 297 GREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM 356
GR D P+ I+ S++ GLG C + S + + +WG +LG
Sbjct: 4180 GRGGSDGCKVPMKID----SLT-GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4234
Query: 357 GPDNV--PLVVEGLEGE 371
D+V P V+GL+G+
Sbjct: 4235 SDDHVRRPRQVQGLQGK 4251
Score = 200 (75.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 52/187 (27%), Positives = 94/187 (50%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVS--AGHYHSLAV 79
+A+G + ++G G G LG S D +P V L V ++ +G +L +
Sbjct: 4109 TAAGD-LYTWGKGRYGRLGHSDS-----EDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T++ VW+WG + +LGRG + P +++ L + V S A+ G+
Sbjct: 4163 TDDDTVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLTGLGVVKVECGSQFSVALTKSGA 4219
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
++ WGK +LG G D P +V+ L G+K++ ++ G H + TEDG+++ WG +
Sbjct: 4220 VYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4278
Query: 200 ADGRIGN 206
+G++G+
Sbjct: 4279 DEGQLGD 4285
Score = 195 (73.7 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 55/186 (29%), Positives = 87/186 (46%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNN 82
+A+G V S+G G G LG ++ V ++ G +S A+T
Sbjct: 512 AATGE-VYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC-AAFASGVVSS-AIGDDGSL 140
G ++ WGR N +LG G+ E A P V GL + V A SG + A+ ++G +
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAI---PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQV 627
Query: 141 WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
W WG G+LG G P +E L ++KV G ++A T+DG+++ WG
Sbjct: 628 WSWGDGDYGKLGRGGS-DGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGD 686
Query: 201 DGRIGN 206
+ R+G+
Sbjct: 687 NQRLGH 692
Score = 192 (72.6 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 56/161 (34%), Positives = 81/161 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG G G D + P ++ L V V G S+A+T +GAV+
Sbjct: 4168 VWSWGDGDYGKLG-----RG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 4221
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG+ + +LG G+ + P++V+GL V A + +DG ++ WG +
Sbjct: 4222 TWGKGDYHRLGHGS-DDHV--RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4278
Query: 147 KRGQLGLGKDITEAIV-PSRVEALAGEKIVKVSFGWGHALA 186
GQLG G T AI P V AL G+K+ +V+ G H LA
Sbjct: 4279 DEGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 192 (72.6 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 84/283 (29%), Positives = 118/283 (41%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
+ + S GH H LA+ G V++WG + +LG G G
Sbjct: 499 IAAHSDGH-HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHI 557
Query: 126 ASG-VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
A G S+AI +G L+ WG+ G+LG G EAI P V L G K++ V+ G G A
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 616
Query: 185 --LAQTEDGKLFGWG---YSADGRIGNLG----KALES-SPLD-------SNXXXXXXXX 227
LA TE+G+++ WG Y GR G+ G K +E LD S
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD 676
Query: 228 XXXXXXXXXKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLS 287
Q+L G E+ P + E ++G +V+D+A G H L L + + S
Sbjct: 677 GQVYSWGKGDNQRL-GHGTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCLALTEDSEVHS 733
Query: 288 CGSNVYGQ----LGREKQDMGMFPVDINFHPVSISSGLGHSLA 326
GSN Q L K + P + H V I+ G S A
Sbjct: 734 WGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFA 776
Score = 192 (72.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 81/307 (26%), Positives = 133/307 (43%)
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
V+ WG N++ QLG G S+ P E L +NV A+ +G ++ G
Sbjct: 2962 VFVWGLNDKDQLG-GLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCG 3018
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFGWGYSADG 202
++ G+LGLG +P ++ AL+ + KV+ G HA A T DGK+F WG DG
Sbjct: 3019 EATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDG 3078
Query: 203 RIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYM-----P 253
++G+ + P +++ + +L + G+ + +
Sbjct: 3079 KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNT 3138
Query: 254 IIWEPFLVE---GVEVVDIACGF-D-HSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPV 308
+P +V+ G V+ +ACG D +L L G++ S G +G+LGR + P
Sbjct: 3139 TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 3198
Query: 309 DINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSS--QLGRMGPDNV--PLV 364
+I +G G C + S + G+V W W + +LG +V P V
Sbjct: 3199 NIER-----LNGQGVCQIECGAQFSLALTKS-GVV-WTWGKGDYFRLGHGSDVHVRKPQV 3251
Query: 365 VEGLEGE 371
VEGL G+
Sbjct: 3252 VEGLRGK 3258
Score = 186 (70.5 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 51/161 (31%), Positives = 73/161 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V S+GDG G LG G P + L V + G SLA+T +G VW
Sbjct: 3175 VFSWGDGDFGKLG-----RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3229
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG+ + +LG G S P+ VEGL + + A+ D G ++ WG +
Sbjct: 3230 WGKGDYFRLGHG---SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDND 3286
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT 188
GQ G G P+ V+ L G+KI +V+ G H++A T
Sbjct: 3287 HGQQGNGTTTVNR-KPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 163 (62.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 54/189 (28%), Positives = 89/189 (47%)
Query: 23 SASGTAVV-SFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAV 79
SA G+ + +G +G LG G+ G + PT L + + G AV
Sbjct: 3949 SAGGSGTIYGWGHNHRGQLG------GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV 4002
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--CAAFASGVVSSAIGDD 137
T +G ++A G +LG G ES +T P +E + V + A + G A+ +
Sbjct: 4003 TADGKLYATGYGAGGRLGIGGTESVST---PTLLESIQHVFIKKVAVNSGGKHCLALSSE 4059
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG+++ G+LG G + P +E+L G ++V V+ G H+ T G L+ WG
Sbjct: 4060 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4118
Query: 198 YSADGRIGN 206
GR+G+
Sbjct: 4119 KGRYGRLGH 4127
Score = 155 (59.6 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVC 122
+V V+ G AVT G V++ G +LG G S T P+++ L V
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGM--SSGTVPIPRQITALSSYVVKKV 3051
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
A + G ++A+ DG ++ WG+ G+LG + P +EAL ++I ++ G
Sbjct: 3052 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSS 3110
Query: 183 HALAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
H+ A T G+L+ WG GR+G+ + P
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKP 3143
Score = 122 (48.0 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 45/168 (26%), Positives = 75/168 (44%)
Query: 56 PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P + GL S V V+ L ++ NG V+ N+++ P+ V+
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLA-------------PQLVQ 489
Query: 115 GLDQVNVC--AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEAL--- 169
GL N+ AA + G A+ G ++ WG G+LG G D P + A
Sbjct: 490 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG-DTVPLEEPKVISAFSGK 548
Query: 170 -AGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPL 216
AG+ +V ++ G ++ A T +G+L+ WG GR+G+ E+ P+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Score = 86 (35.3 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 34/118 (28%), Positives = 52/118 (44%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSG 320
+ G V I CG SL L ++GV+ + G Y +LG D++ + G
Sbjct: 3203 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEG 3254
Query: 321 L-GHSL---AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
L G + A+ + VT + + +WG N Q G G V P +V+GLEG+
Sbjct: 3255 LRGKKIVHVAVGALHCLAVTDSGQ-VYAWGDNDHGQQGN-GTTTVNRKPTLVQGLEGQ 3310
Score = 79 (32.9 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 31/116 (26%), Positives = 49/116 (42%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVSIS 318
G+ VV + CG S+ L ++G + + G Y +LG D P + ++I+
Sbjct: 4198 GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4257
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
+G H +C V +WG N QLG G N P +V L+G+
Sbjct: 4258 TGSLH--CVCCTEDGEV-------YTWGDNDEGQLGD-GTTNAIQRPRLVAALQGK 4303
Score = 43 (20.2 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 274 DHSLVLGRNGVLLSCGSNVYGQLG 297
D +L G +G + G N GQLG
Sbjct: 3945 DWTLSAGGSGTIYGWGHNHRGQLG 3968
Score = 38 (18.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 261 VEGVEVVDIACGFDHSL 277
++G +V +ACG H+L
Sbjct: 4300 LQGKKVNRVACGSAHTL 4316
Score = 37 (18.1 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 5/9 (55%), Positives = 6/9 (66%)
Query: 86 WAWGRNNEV 94
W WGR +V
Sbjct: 102 WVWGRQPDV 110
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 228 (85.3 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 86/332 (25%), Positives = 147/332 (44%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT---SVSAGHYH 75
+F + G V + G+ + G LGL S G P ++ L S V +V +G H
Sbjct: 3005 LFAVTVEGK-VYACGEATNGRLGLGLS----SGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+ A+T +G V++WG ++ +LG SR + P+ +E L + S+A+
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHF---SRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3116
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKL 193
G L+ WG + G+LG G + T+ + P V+ L G ++++V+ G A LA T++G +
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 3175
Query: 194 FGWGYSADGRIGNLGKA-LESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGME----K 248
F WG DG G LG+ E + N + L G+ K
Sbjct: 3176 FSWG---DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3232
Query: 249 EKYMPI-------IWEPFLVEGV---EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
Y + + +P +VEG+ ++V +A G H L + G + + G N +GQ G
Sbjct: 3233 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGN 3292
Query: 299 EKQDMGMFPV---DINFHPVS-ISSGLGHSLA 326
+ P + ++ ++ G HS+A
Sbjct: 3293 GTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 223 (83.6 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 61/178 (34%), Positives = 88/178 (49%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVS--AGHYHSLAV 79
+A G + ++G G+ G LG G D P V GL V V+ +G +LAV
Sbjct: 568 TAEGE-LYTWGRGNYGRLG-----HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T NG VW+WG + +LGRG + T PK +E L ++V S A+ DG
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKT---PKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 678
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
++ WGK +LG G + P +E L G+K++ V+ G H LA TED ++ WG
Sbjct: 679 VYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 217 (81.4 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 79/286 (27%), Positives = 127/286 (44%)
Query: 34 DGSQGALGLPTS-LTGVGG--DAYEPTRVPGLPS---DVTSVSAGHYHSLAVTNNGAVWA 87
DG A G G+GG PT + + +V++G H LA+++ G V++
Sbjct: 4006 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4065
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG + +LG G +R+ + P+ +E L + V A G S+ + G L+ WGK +
Sbjct: 4066 WGEAEDGKLGHG---NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4122
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKLFGWGYSADGRIG 205
G+LG D + + P VEAL G ++V V+ G G A L T+D ++ WG G++G
Sbjct: 4123 YGRLG-HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4181
Query: 206 NLGKALESSPL--DS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPI------- 254
G P+ DS K+ + + G K Y +
Sbjct: 4182 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDH 4239
Query: 255 IWEPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+ P V+G++ V+ IA G H + +G + + G N GQLG
Sbjct: 4240 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4285
Score = 205 (77.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 85/317 (26%), Positives = 141/317 (44%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+L+ +G ++ WG N+ QLG +E A P E L + A+
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLG--GIEG-AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWG--HALAQTEDGK 192
DG L+ G G+LG+G TE++ P+ +E++ I KV+ G H LA + +G+
Sbjct: 4005 ADGKLYATGYGAGGRLGIGG--TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4062
Query: 193 LFGWGYSADGRIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEK 248
++ WG + DG++G+ ++ P ++S A L + G K
Sbjct: 4063 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG--K 4120
Query: 249 EKYMPI-------IWEPFLVEGVE---VVDIACGFD--HSLVLGRNGVLLSCGSNVYGQL 296
+Y + +P LVE ++ VVD+ACG +L L + + S G YG+L
Sbjct: 4121 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4180
Query: 297 GREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM 356
GR D P+ I+ S++ GLG C + S + + +WG +LG
Sbjct: 4181 GRGGSDGCKVPMKID----SLT-GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4235
Query: 357 GPDNV--PLVVEGLEGE 371
D+V P V+GL+G+
Sbjct: 4236 SDDHVRRPRQVQGLQGK 4252
Score = 202 (76.2 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 53/187 (28%), Positives = 94/187 (50%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVS--AGHYHSLAV 79
+A+G + ++G G G LG S D +P V L V V+ +G +L +
Sbjct: 4110 TAAGD-LYTWGKGRYGRLGHSDS-----EDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4163
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T++ VW+WG + +LGRG + P +++ L + V S A+ G+
Sbjct: 4164 TDDDTVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLTGLGVVKVECGSQFSVALTKSGA 4220
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
++ WGK +LG G D P +V+ L G+K++ ++ G H + TEDG+++ WG +
Sbjct: 4221 VYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4279
Query: 200 ADGRIGN 206
+G++G+
Sbjct: 4280 DEGQLGD 4286
Score = 196 (74.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 56/186 (30%), Positives = 87/186 (46%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNN 82
+A+G V S+G G G LG ++ V ++ G +S A+T
Sbjct: 512 AATGE-VYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC-AAFASGVVSS-AIGDDGSL 140
G ++ WGR N +LG G+ E A P V GL + V A SG + A+ ++G +
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAI---PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQV 627
Query: 141 WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
W WG G+LG G P +E L +VKV G ++A T+DG+++ WG
Sbjct: 628 WSWGDGDYGKLGRGGS-DGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 686
Query: 201 DGRIGN 206
+ R+G+
Sbjct: 687 NQRLGH 692
Score = 196 (74.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 83/314 (26%), Positives = 135/314 (42%)
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDD 137
A T V+ WG N++ QLG G S+ P E L +NV A+ +
Sbjct: 2955 AATIRTKVFVWGLNDKDQLG-GLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFG 195
G ++ G++ G+LGLG +P ++ AL+ + KV+ G HA A T DGK+F
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 196 WGYSADGRIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKY 251
WG DG++G+ + P +++ + +L + G+ +
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 252 M-----PIIWEPFLVE---GVEVVDIACGF-D-HSLVLGRNGVLLSCGSNVYGQLGREKQ 301
+ +P +V+ G V+ +ACG D +L L G++ S G +G+LGR
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 302 DMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSS--QLGRMGPD 359
+ P +I +G G C + S + G+V W W + +LG
Sbjct: 3192 EGCNIPQNIER-----LNGQGVCQIECGAQFSLALTKS-GVV-WTWGKGDYFRLGHGSDV 3244
Query: 360 NV--PLVVEGLEGE 371
+V P VVEGL G+
Sbjct: 3245 HVRKPQVVEGLRGK 3258
Score = 194 (73.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 85/284 (29%), Positives = 119/284 (41%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
+ + S GH H LA+ G V++WG + +LG G G
Sbjct: 499 IAAHSDGH-HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHI 557
Query: 126 ASG-VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
A G S+AI +G L+ WG+ G+LG G EAI P V L G K++ V+ G G A
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 616
Query: 185 --LAQTEDGKLFGWG---YSADGRIGNLG----KALES-SPLD-------SNXXXXXXXX 227
LA TE+G+++ WG Y GR G+ G K +E LD S
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD 676
Query: 228 XXXXXXXXXKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLS 287
Q+L G E+ P + E ++G +V+D+A G H L L + + S
Sbjct: 677 GQVYSWGKGDNQRL-GHGTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCLALTEDSEVHS 733
Query: 288 CGSNVYGQ----LGREKQDMGMFP-VDINFHPVSISSGLGHSLA 326
GSN Q L K + P +D H V I+ G S A
Sbjct: 734 WGSNDQCQHFDTLRVTKPEPAALPGLDTK-HIVGIACGPAQSFA 776
Score = 192 (72.6 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 56/161 (34%), Positives = 81/161 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG G G D + P ++ L V V G S+A+T +GAV+
Sbjct: 4169 VWSWGDGDYGKLG-----RG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 4222
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG+ + +LG G+ + P++V+GL V A + +DG ++ WG +
Sbjct: 4223 TWGKGDYHRLGHGS-DDHV--RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 4279
Query: 147 KRGQLGLGKDITEAIV-PSRVEALAGEKIVKVSFGWGHALA 186
GQLG G T AI P V AL G+K+ +V+ G H LA
Sbjct: 4280 DEGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 184 (69.8 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 51/161 (31%), Positives = 73/161 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V S+GDG G LG G P + L V + G SLA+T +G VW
Sbjct: 3175 VFSWGDGDFGKLG-----RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3229
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG+ + +LG G S P+ VEGL + + A+ D G ++ WG +
Sbjct: 3230 WGKGDYFRLGHG---SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDND 3286
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT 188
GQ G G P+ V+ L G+KI +V+ G H++A T
Sbjct: 3287 HGQQGNGTTTVNR-KPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 163 (62.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 54/189 (28%), Positives = 89/189 (47%)
Query: 23 SASGTAVV-SFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAV 79
SA G+ + +G +G LG G+ G + PT L + + G AV
Sbjct: 3950 SAGGSGTIYGWGHNHRGQLG------GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV 4003
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--CAAFASGVVSSAIGDD 137
T +G ++A G +LG G ES +T P +E + V + A + G A+ +
Sbjct: 4004 TADGKLYATGYGAGGRLGIGGTESVST---PTLLESIQHVFIKKVAVNSGGKHCLALSSE 4060
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG+++ G+LG G + P +E+L G ++V V+ G H+ T G L+ WG
Sbjct: 4061 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4119
Query: 198 YSADGRIGN 206
GR+G+
Sbjct: 4120 KGRYGRLGH 4128
Score = 158 (60.7 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 45/153 (29%), Positives = 72/153 (47%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVC 122
+V V+ G AVT G V+A G +LG G S T P+++ L V
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGL--SSGTVPIPRQITALSSYVVKKV 3051
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
A + G ++A+ DG ++ WG+ G+LG + P +EAL ++I ++ G
Sbjct: 3052 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSS 3110
Query: 183 HALAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
H+ A T G+L+ WG GR+G+ + P
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKP 3143
Score = 123 (48.4 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 44/168 (26%), Positives = 75/168 (44%)
Query: 56 PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P + GL + VT ++ L ++ NG V+ N++ P+ V+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLA-------------PQLVQ 489
Query: 115 GLDQVNVC--AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEAL--- 169
GL N+ AA + G A+ G ++ WG G+LG G D P + A
Sbjct: 490 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG-DTVPLEEPKVISAFSGK 548
Query: 170 -AGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPL 216
AG+ +V ++ G ++ A T +G+L+ WG GR+G+ E+ P+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Score = 86 (35.3 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 34/118 (28%), Positives = 52/118 (44%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSG 320
+ G V I CG SL L ++GV+ + G Y +LG D++ + G
Sbjct: 3203 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEG 3254
Query: 321 L-GHSL---AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
L G + A+ + VT + + +WG N Q G G V P +V+GLEG+
Sbjct: 3255 LRGKKIVHVAVGALHCLAVTDAGQ-VYAWGDNDHGQQGN-GTTTVNRKPTLVQGLEGQ 3310
Score = 79 (32.9 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 31/116 (26%), Positives = 49/116 (42%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVSIS 318
G+ VV + CG S+ L ++G + + G Y +LG D P + ++I+
Sbjct: 4199 GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4258
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
+G H +C V +WG N QLG G N P +V L+G+
Sbjct: 4259 TGSLH--CVCCTEDGEV-------YTWGDNDEGQLGD-GTTNAIQRPRLVAALQGK 4304
Score = 43 (20.2 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 274 DHSLVLGRNGVLLSCGSNVYGQLG 297
D +L G +G + G N GQLG
Sbjct: 3946 DWTLSAGGSGTIYGWGHNHRGQLG 3969
Score = 39 (18.8 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 243 SEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLG 280
SEG E Y+P P + + V+ + G D L LG
Sbjct: 2184 SEGALLEDYLPDSENPEVGGLMAVLAVIGGIDGRLRLG 2221
Score = 38 (18.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 261 VEGVEVVDIACGFDHSL 277
++G +V +ACG H+L
Sbjct: 4301 LQGKKVNRVACGSAHTL 4317
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 228 (85.3 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 86/332 (25%), Positives = 147/332 (44%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT---SVSAGHYH 75
+F + G V + G+ + G LGL S G P ++ L S V +V +G H
Sbjct: 3015 LFAVTVEGK-VYACGEATNGRLGLGIS----SGTVPIPRQITALSSYVVKKVAVHSGGRH 3069
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+ A+T +G V++WG ++ +LG SR + P+ +E L + S+A+
Sbjct: 3070 ATALTVDGKVFSWGEGDDGKLGHF---SRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3126
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKL 193
G L+ WG + G+LG G + T+ + P V+ L G ++++V+ G A LA T++G +
Sbjct: 3127 SSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 3185
Query: 194 FGWGYSADGRIGNLGKA-LESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGME----K 248
F WG DG G LG+ E + N + L G+ K
Sbjct: 3186 FSWG---DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3242
Query: 249 EKYMPI-------IWEPFLVEGV---EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
Y + + +P +VEG+ ++V +A G H L + G + + G N +GQ G
Sbjct: 3243 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGN 3302
Query: 299 EKQDMGMFPV---DINFHPVS-ISSGLGHSLA 326
+ P + ++ ++ G HS+A
Sbjct: 3303 GTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3334
Score = 223 (83.6 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 61/178 (34%), Positives = 88/178 (49%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVS--AGHYHSLAV 79
+A G + ++G G+ G LG G D P V GL V V+ +G +LAV
Sbjct: 568 TAEGE-LYTWGRGNYGRLG-----HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T NG VW+WG + +LGRG + T PK +E L ++V S A+ DG
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKT---PKLIEKLQDLDVVKVRCGSQFSVALTKDGQ 678
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
++ WGK +LG G + P +E L G+K++ V+ G H LA TED ++ WG
Sbjct: 679 VYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 217 (81.4 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 80/286 (27%), Positives = 126/286 (44%)
Query: 34 DGSQGALGLPTS-LTGVGG--DAYEPTRVPGLPS---DVTSVSAGHYHSLAVTNNGAVWA 87
DG A G GVGG PT + + +V++G H LA+++ G V++
Sbjct: 4016 DGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 4075
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG + +LG G +R+ + P+ +E L V A G S+ + G L+ WGK +
Sbjct: 4076 WGEAEDGKLGHG---NRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGR 4132
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKLFGWGYSADGRIG 205
G+LG D + + P VEAL G ++V V+ G G A L T+D ++ WG G++G
Sbjct: 4133 YGRLG-HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4191
Query: 206 NLGKALESSPL--DS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPI------- 254
G P+ DS K+ + + G K Y +
Sbjct: 4192 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDH 4249
Query: 255 IWEPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+ P V+G++ V+ IA G H + +G + + G N GQLG
Sbjct: 4250 VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG 4295
Score = 205 (77.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 85/317 (26%), Positives = 141/317 (44%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+L+ +G ++ WG N+ QLG +E A P E L + A+
Sbjct: 3958 TLSAGGSGTIYGWGHNHRGQLG--GIEG-AKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4014
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWG--HALAQTEDGK 192
DG L+ G G+LG+G TE++ P+ +E++ I KV+ G H LA + +G+
Sbjct: 4015 ADGKLYATGYGAGGRLGVGG--TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4072
Query: 193 LFGWGYSADGRIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEK 248
++ WG + DG++G+ ++ P ++S A L + G K
Sbjct: 4073 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWG--K 4130
Query: 249 EKYMPI-------IWEPFLVEGVE---VVDIACGFD--HSLVLGRNGVLLSCGSNVYGQL 296
+Y + +P LVE ++ VVD+ACG +L L + + S G YG+L
Sbjct: 4131 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4190
Query: 297 GREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM 356
GR D P+ I+ S++ GLG C + S + + +WG +LG
Sbjct: 4191 GRGGSDGCKVPMKID----SLT-GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4245
Query: 357 GPDNV--PLVVEGLEGE 371
D+V P V+GL+G+
Sbjct: 4246 SDDHVRRPRQVQGLQGK 4262
Score = 198 (74.8 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 52/187 (27%), Positives = 94/187 (50%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVS--AGHYHSLAV 79
+A+G + ++G G G LG S D +P V L V V+ +G +L +
Sbjct: 4120 TAAGD-LYTWGKGRYGRLGHSDS-----EDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4173
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T++ VW+WG + +LGRG + P +++ L + V S A+ G+
Sbjct: 4174 TDDDTVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLTGLGVVKVECGSQFSVALTKSGA 4230
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
++ WGK +LG G D P +V+ L G+K++ ++ G H + +EDG+++ WG +
Sbjct: 4231 VYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDN 4289
Query: 200 ADGRIGN 206
+G++G+
Sbjct: 4290 DEGQLGD 4296
Score = 195 (73.7 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 56/186 (30%), Positives = 87/186 (46%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNN 82
+A+G V S+G G G LG ++ V ++ G +S A+T
Sbjct: 512 AATGE-VYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC-AAFASGVVSS-AIGDDGSL 140
G ++ WGR N +LG G+ E A P V GL + V A SG + A+ ++G +
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAI---PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQV 627
Query: 141 WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
W WG G+LG G P +E L +VKV G ++A T+DG+++ WG
Sbjct: 628 WSWGDGDYGKLGRGGS-DGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGD 686
Query: 201 DGRIGN 206
+ R+G+
Sbjct: 687 NQRLGH 692
Score = 195 (73.7 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 83/314 (26%), Positives = 135/314 (42%)
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDD 137
A T V+ WG N++ QLG G S+ P E L +NV A+ +
Sbjct: 2965 AATIRTKVFVWGLNDKDQLG-GLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3021
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFG 195
G ++ G++ G+LGLG +P ++ AL+ + KV+ G HA A T DGK+F
Sbjct: 3022 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3081
Query: 196 WGYSADGRIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKY 251
WG DG++G+ + P +++ + +L + G+ +
Sbjct: 3082 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3141
Query: 252 M-----PIIWEPFLVE---GVEVVDIACGF-D-HSLVLGRNGVLLSCGSNVYGQLGREKQ 301
+ +P +V+ G V+ +ACG D +L L G++ S G +G+LGR
Sbjct: 3142 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3201
Query: 302 DMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSS--QLGRMGPD 359
+ P +I +G G C + S + G+V W W + +LG
Sbjct: 3202 EGCNIPQNIER-----LNGQGVCQIECGAQFSLALTKS-GVV-WTWGKGDYFRLGHGSDV 3254
Query: 360 NV--PLVVEGLEGE 371
+V P VVEGL G+
Sbjct: 3255 HVRKPQVVEGLRGK 3268
Score = 194 (73.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 56/161 (34%), Positives = 81/161 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG G G D + P ++ L V V G S+A+T +GAV+
Sbjct: 4179 VWSWGDGDYGKLG-----RG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 4232
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG+ + +LG G+ + P++V+GL V A + +DG ++ WG +
Sbjct: 4233 TWGKGDYHRLGHGS-DDHV--RRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDN 4289
Query: 147 KRGQLGLGKDITEAIV-PSRVEALAGEKIVKVSFGWGHALA 186
GQLG G T AI P V AL G+K+ +V+ G H LA
Sbjct: 4290 DEGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTLA 4328
Score = 194 (73.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 85/284 (29%), Positives = 119/284 (41%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
+ + S GH H LA+ G V++WG + +LG G G
Sbjct: 499 IAAHSDGH-HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHI 557
Query: 126 ASG-VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
A G S+AI +G L+ WG+ G+LG G EAI P V L G K++ V+ G G A
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 616
Query: 185 --LAQTEDGKLFGWG---YSADGRIGNLG----KALES-SPLD-------SNXXXXXXXX 227
LA TE+G+++ WG Y GR G+ G K +E LD S
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD 676
Query: 228 XXXXXXXXXKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLS 287
Q+L G E+ P + E ++G +V+D+A G H L L + + S
Sbjct: 677 GQVYSWGKGDNQRL-GHGTEEHVRYPKLLEG--LQGKKVIDVAAGSTHCLALTEDSEVHS 733
Query: 288 CGSNVYGQ----LGREKQDMGMFP-VDINFHPVSISSGLGHSLA 326
GSN Q L K + P +D H V I+ G S A
Sbjct: 734 WGSNDQCQHFDTLRVTKPEPSALPGLDTK-HIVGIACGPAQSFA 776
Score = 184 (69.8 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 51/161 (31%), Positives = 73/161 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V S+GDG G LG G P + L V + G SLA+T +G VW
Sbjct: 3185 VFSWGDGDFGKLG-----RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3239
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG+ + +LG G S P+ VEGL + + A+ D G ++ WG +
Sbjct: 3240 WGKGDYFRLGHG---SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDND 3296
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT 188
GQ G G P+ V+ L G+KI +V+ G H++A T
Sbjct: 3297 HGQQGNGTTTVNR-KPTLVQGLEGQKITRVACGSSHSVAWT 3336
Score = 165 (63.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 54/189 (28%), Positives = 89/189 (47%)
Query: 23 SASGTAVV-SFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAV 79
SA G+ + +G +G LG G+ G + PT L + + G AV
Sbjct: 3960 SAGGSGTIYGWGHNHRGQLG------GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAV 4013
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--CAAFASGVVSSAIGDD 137
T +G ++A G +LG G ES +T P +E + V + A + G A+ +
Sbjct: 4014 TADGKLYATGYGAGGRLGVGGTESVST---PTLLESIQHVFIKKVAVNSGGKHCLALSSE 4070
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG+++ G+LG G + P +E+L G ++V V+ G H+ T G L+ WG
Sbjct: 4071 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWG 4129
Query: 198 YSADGRIGN 206
GR+G+
Sbjct: 4130 KGRYGRLGH 4138
Score = 158 (60.7 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 45/153 (29%), Positives = 72/153 (47%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVC 122
+V V+ G AVT G V+A G +LG G S T P+++ L V
Sbjct: 3004 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI--SSGTVPIPRQITALSSYVVKKV 3061
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
A + G ++A+ DG ++ WG+ G+LG + P +EAL ++I ++ G
Sbjct: 3062 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSS 3120
Query: 183 HALAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
H+ A T G+L+ WG GR+G+ + P
Sbjct: 3121 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKP 3153
Score = 123 (48.4 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 44/168 (26%), Positives = 75/168 (44%)
Query: 56 PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P + GL + VT ++ L ++ NG V+ N++ P+ V+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLA-------------PQLVQ 489
Query: 115 GLDQVNVC--AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEAL--- 169
GL N+ AA + G A+ G ++ WG G+LG G D P + A
Sbjct: 490 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG-DTVPLEEPKVISAFSGK 548
Query: 170 -AGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPL 216
AG+ +V ++ G ++ A T +G+L+ WG GR+G+ E+ P+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596
Score = 86 (35.3 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 34/118 (28%), Positives = 52/118 (44%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSG 320
+ G V I CG SL L ++GV+ + G Y +LG D++ + G
Sbjct: 3213 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEG 3264
Query: 321 L-GHSL---AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
L G + A+ + VT + + +WG N Q G G V P +V+GLEG+
Sbjct: 3265 LRGKKIVHVAVGALHCLAVTDAGQ-VYAWGDNDHGQQGN-GTTTVNRKPTLVQGLEGQ 3320
Score = 77 (32.2 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 31/116 (26%), Positives = 50/116 (43%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVSIS 318
G+ VV + CG S+ L ++G + + G Y +LG D P + ++I+
Sbjct: 4209 GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4268
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
+G H + E G + +WG N QLG G N P +V L+G+
Sbjct: 4269 TGSLHCVCCSE-------DGE--VYTWGDNDEGQLGD-GTTNAIQRPRLVAALQGK 4314
Score = 43 (20.2 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 274 DHSLVLGRNGVLLSCGSNVYGQLG 297
D +L G +G + G N GQLG
Sbjct: 3956 DWTLSAGGSGTIYGWGHNHRGQLG 3979
Score = 38 (18.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 261 VEGVEVVDIACGFDHSL 277
++G +V +ACG H+L
Sbjct: 4311 LQGKKVNRVACGSAHTL 4327
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 246 (91.7 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 64/191 (33%), Positives = 105/191 (54%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
V ++G GS+G LG+ S ++ PT++ L + VS GHYHSLA++ +G V++
Sbjct: 101 VFTWGAGSEGQLGIGESKE----ISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFS 156
Query: 88 WGRNNEVQLGRGA-LESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG N + QLG G L S+A+ P++V+ L+ + + A G S A+ G+ + WG +
Sbjct: 157 WGSNRQGQLGLGNNLCSQAS---PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNN 213
Query: 147 KRGQLGL-GKDITEAIV-PSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
+ GQL L G E I P + AL +V +S G+ H TEDG++F +G S+ ++
Sbjct: 214 RSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL 273
Query: 205 GNLGKALESSP 215
+ ++ P
Sbjct: 274 QHSPRSGRGGP 284
Score = 240 (89.5 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 70/260 (26%), Positives = 127/260 (48%)
Query: 55 EPTRVP-GLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRV 113
+P R+ G + ++G HSL + +N V++ G N+ QLG+ + +S P+ +
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKR---PEPI 74
Query: 114 EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEK 173
+ L V++ S A+ G ++ WG GQLG+G+ + +P+++ +LAG K
Sbjct: 75 QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIK 134
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKAL--ESSPLDSNXXXXXXXXXXXX 231
I++VS G H+LA +EDG++F WG + G++G LG L ++SP
Sbjct: 135 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLG-LGNNLCSQASPQKVKSLEGIPLAQVAA 193
Query: 232 XXXXXKAQKLVSE----GMEKEKYMPI--------IWEPFLVEGVE---VVDIACGFDHS 276
A L+ G + + + I++P + ++ VV I+CG++H+
Sbjct: 194 GGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHT 253
Query: 277 LVLGRNGVLLSCGSNVYGQL 296
VL +G + + G + QL
Sbjct: 254 SVLTEDGQVFTFGGSSSEQL 273
Score = 237 (88.5 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 60/189 (31%), Positives = 95/189 (50%)
Query: 25 SGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNG 83
S V S GD S+G LG + + P + L + + VS G HS+AV + G
Sbjct: 45 SNHRVYSCGDNSRGQLGQKSPQS-----TKRPEPIQALSTVHIDLVSCGKEHSVAVCHQG 99
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
V+ WG +E QLG G ES+ P ++ L + + S A+ +DG ++ W
Sbjct: 100 RVFTWGAGSEGQLGIG--ESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSW 157
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGR 203
G +++GQLGLG ++ P +V++L G + +V+ G H+ A + G FGWG + G+
Sbjct: 158 GSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQ 217
Query: 204 I---GNLGK 209
+ GN K
Sbjct: 218 LALSGNSAK 226
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 238 (88.8 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 90/299 (30%), Positives = 134/299 (44%)
Query: 20 FMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTS---VSAGHY-H 75
F+ A+GT V++ G+GS G LG G D + T + L V + S G H
Sbjct: 4035 FVIQANGT-VLACGEGSYGRLG-----QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4088
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
S+A+T +G V++WG + +LG G + + P+++E L V S+ +
Sbjct: 4089 SMALTESGEVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4145
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
DG L+ +G G+LGLG + + P RV AL G +I +V+ G H LA + DG +
Sbjct: 4146 SDGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMV- 4203
Query: 196 WGYSADGRIGNLG---KALESSP--LD--SNXXXXXXXXXXXXXXXXXK--------AQK 240
W + DG G LG +SSP +D K +
Sbjct: 4204 WAFG-DGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4262
Query: 241 LVS--EGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
L+ EG + P P L GV + D+A G +H+L L G + + GSN GQLG
Sbjct: 4263 LIGLPEGRARNHNRPQ-QIPVLA-GVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLG 4319
Score = 206 (77.6 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 63/175 (36%), Positives = 86/175 (49%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG-LPSDVT-SVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG S T Y P + G L V VSAG+ HS AVT +G ++
Sbjct: 479 VFSWGDGDYGKLGHGNSST----QKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG-SLWVWGK 145
WG + +LG G SR N P V+ + V + +S + A+ DG ++W +G
Sbjct: 534 TWGEGDFGRLGHGDSNSR---NIPTLVKDISNVGEVSCGSSHTI--ALSKDGRTVWSFGG 588
Query: 146 SKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
G+LG G D P +EAL G I KV G +LA T G+++ WG A
Sbjct: 589 GDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Score = 204 (76.9 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 60/208 (28%), Positives = 101/208 (48%)
Query: 2 RLLKSVVHNHVNVLTSRIFMRSASGTA---VVSFGDGSQGALGLPTSLTGVGGDAYEPTR 58
+L++ + V V S + SA+ T + ++G+G G LG G PT
Sbjct: 502 KLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-----HGDSNSRNIPTL 556
Query: 59 VPGLPSDVTSVSAGHYHSLAVTNNG-AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLD 117
V + S+V VS G H++A++ +G VW++G + +LG G ++ + PK +E L
Sbjct: 557 VKDI-SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG--DTNRVYK-PKVIEALQ 612
Query: 118 QVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
+ + A S A+ G ++ WG LG G A+ P +E LA +IV +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDI 670
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRIG 205
S G H LA + D +++ WG ++ G+ G
Sbjct: 671 SIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 192 (72.6 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 59/191 (30%), Positives = 101/191 (52%)
Query: 20 FMRSASGTAVVSFGDGSQGALGLPTS--LTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSL 77
F+ S G+ V + G GS G LGL S + + +EP R V+S H+L
Sbjct: 416 FVISTDGS-VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI---KKVSSSKGSDGHTL 471
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVV-SSAIGD 136
A T G V++WG + +LG G + +T PK ++G Q V ++G S+A+ +
Sbjct: 472 AFTTEGEVFSWGDGDYGKLGHG---NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 137 DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGK-LFG 195
DG L+ WG+ G+LG G D +P+ V+ ++ + +VS G H +A ++DG+ ++
Sbjct: 529 DGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWS 585
Query: 196 WGYSADGRIGN 206
+G +G++G+
Sbjct: 586 FGGGDNGKLGH 596
Score = 186 (70.5 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 61/199 (30%), Positives = 85/199 (42%)
Query: 3 LLKSVVH-NHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG 61
L+K + + V+ +S S G V SFG G G LG G Y+P +
Sbjct: 556 LVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-----HGDTNRVYKPKVIEA 610
Query: 62 LPSD-VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVN 120
L + V AG SLA+T+ G V+AWG LG G+ S AT PK +E L
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGS--SEATALRPKLIEELAATR 666
Query: 121 VCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFG 180
+ A+ D ++ WG + GQ G G P +V L G I ++S G
Sbjct: 667 IVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726
Query: 181 WGHALAQT---EDGKLFGW 196
H+LA T D ++ W
Sbjct: 727 TSHSLAWTALPRDRQVVAW 745
Score = 176 (67.0 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 51/171 (29%), Positives = 78/171 (45%)
Query: 38 GALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLG 97
GA G L G + P P S V G + + NG V A G + +LG
Sbjct: 3998 GA-GRHGQLAEAGRNVMVPAAAPSF-SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLG 4055
Query: 98 RGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDI 157
+G + ++G + + S S A+ + G ++ WG G+LG G
Sbjct: 4056 QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSD 4115
Query: 158 TEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
+ P ++EAL GE++V++S G+ H+ T DGKLF +G GR+G LG
Sbjct: 4116 RQRR-PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLG-LG 4164
Score = 175 (66.7 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 45/153 (29%), Positives = 77/153 (50%)
Query: 55 EPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
+P P SD ++ AG Y + ++ +G+V A G+ + +LG G +++T
Sbjct: 395 QPKLAPSF-SDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEP 453
Query: 115 GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA-LAGEK 173
V ++ S + A +G ++ WG G+LG G T+ P ++ L G+
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKV 512
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
+V VS G+ H+ A TEDG+L+ WG GR+G+
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Score = 173 (66.0 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 57/194 (29%), Positives = 97/194 (50%)
Query: 20 FMRSASGTA---VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYH 75
F SA T+ + +FG+G G LGL G + P RV L + V+ G H
Sbjct: 4138 FKHSAVVTSDGKLFTFGNGDYGRLGL-----GNTSNKKLPERVTALEGYQIGQVACGLNH 4192
Query: 76 SLAVTNNGA-VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
+LAV+ +G+ VWA+G + +LG G ++++ P++V+ L + + S A+
Sbjct: 4193 TLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS---PQKVDVLCGIGIKKVACGTQFSVAL 4249
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
DG ++ +G+ + L G+ P ++ LAG I V+ G H LA G ++
Sbjct: 4250 TKDGHVYTFGQDRLIGLPEGRARNHNR-PQQIPVLAGVVIEDVAVGAEHTLALASTGDVY 4308
Query: 195 GWGYSADGRIGNLG 208
WG +++G++G LG
Sbjct: 4309 AWGSNSEGQLG-LG 4321
Score = 123 (48.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 43/138 (31%), Positives = 56/138 (40%)
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG 138
V+ V+ WG N+ QL G E PK A + I DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKIL---QPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 139 SLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGW-GHALAQTEDGKLFGW 196
S+ GK G+LGLG ++ + E K V S G GH LA T +G++F W
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 197 GYSADGRIGNLGKALESS 214
G DG G LG S+
Sbjct: 483 G---DGDYGKLGHGNSST 497
Score = 102 (41.0 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN----FHPVS 316
++G EVV ++CGF HS V+ +G L + G+ YG+LG P + +
Sbjct: 4126 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQ 4185
Query: 317 ISSGLGHSLAI 327
++ GL H+LA+
Sbjct: 4186 VACGLNHTLAV 4196
Score = 99 (39.9 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 36/136 (26%), Positives = 63/136 (46%)
Query: 240 KLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
KL +KY +I P ++G VV ++ G+ HS + +G L + G +G+LG
Sbjct: 489 KLGHGNSSTQKYPKLIQGP--LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 300 KQDMGMFPV---DINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM 356
+ P DI+ + +S G H++A+ + R + S+G + +LG
Sbjct: 547 DSNSRNIPTLVKDIS-NVGEVSCGSSHTIALSK--------DGRTVWSFGGGDNGKLGHG 597
Query: 357 GPDNV--PLVVEGLEG 370
+ V P V+E L+G
Sbjct: 598 DTNRVYKPKVIEALQG 613
Score = 91 (37.1 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 33/112 (29%), Positives = 50/112 (44%)
Query: 269 IACGFDHSLVLGRNGVLLSCGSNVYGQLGR-EKQDMGMFPVDINFHPVSI-----SSGL- 321
+ CG + + V+ NG +L+CG YG+LG+ D+ + V + S G
Sbjct: 4027 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4086
Query: 322 GHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEGE 371
GHS+A+ E G + SWG +LG D P +E L+GE
Sbjct: 4087 GHSMALTE-------SGE--VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE 4129
Score = 69 (29.3 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 30/116 (25%), Positives = 53/116 (45%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSN-VYG-QLGREKQDMG--MFPVDINFHPVSIS 318
G+ + +ACG S+ L ++G + + G + + G GR + PV ++
Sbjct: 4233 GIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVA 4292
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEGES 372
G H+LA+ TG + +WG N QLG ++V P +V L+G++
Sbjct: 4293 VGAEHTLALAS------TGD---VYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4339
Score = 67 (28.6 bits), Expect = 9.8e-14, Sum P(3) = 9.8e-14
Identities = 25/81 (30%), Positives = 37/81 (45%)
Query: 258 PFLVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG---------REKQDMGM 305
P L+E +VDI+ G H L L + + + G+N GQ G + K+ G+
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL 715
Query: 306 FPVDINFHPVSISSGLGHSLA 326
+ I IS+G HSLA
Sbjct: 716 DGIAIQ----QISAGTSHSLA 732
Score = 39 (18.8 bits), Expect = 9.8e-14, Sum P(3) = 9.8e-14
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 337 GGARGIVSWGWNRSSQLGRMG 357
GG + WG R QL G
Sbjct: 3989 GGKCDVYLWGAGRHGQLAEAG 4009
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 238 (88.8 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 90/299 (30%), Positives = 134/299 (44%)
Query: 20 FMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTS---VSAGHY-H 75
F+ A+GT V++ G+GS G LG G D + T + L V + S G H
Sbjct: 4038 FVIQANGT-VLACGEGSYGRLG-----QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4091
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
S+A+T +G V++WG + +LG G + + P+++E L V S+ +
Sbjct: 4092 SMALTESGEVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4148
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
DG L+ +G G+LGLG + + P RV AL G +I +V+ G H LA + DG +
Sbjct: 4149 SDGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMV- 4206
Query: 196 WGYSADGRIGNLG---KALESSP--LD--SNXXXXXXXXXXXXXXXXXK--------AQK 240
W + DG G LG +SSP +D K +
Sbjct: 4207 WAFG-DGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4265
Query: 241 LVS--EGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
L+ EG + P P L GV + D+A G +H+L L G + + GSN GQLG
Sbjct: 4266 LIGLPEGRARNHNRPQ-QIPVLA-GVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLG 4322
Score = 206 (77.6 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 63/175 (36%), Positives = 86/175 (49%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG-LPSDVT-SVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG S T Y P + G L V VSAG+ HS AVT +G ++
Sbjct: 479 VFSWGDGDYGKLGHGNSST----QKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG-SLWVWGK 145
WG + +LG G SR N P V+ + V + +S + A+ DG ++W +G
Sbjct: 534 TWGEGDFGRLGHGDSNSR---NIPTLVKDISNVGEVSCGSSHTI--ALSKDGRTVWSFGG 588
Query: 146 SKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
G+LG G D P +EAL G I KV G +LA T G+++ WG A
Sbjct: 589 GDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Score = 204 (76.9 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 60/208 (28%), Positives = 101/208 (48%)
Query: 2 RLLKSVVHNHVNVLTSRIFMRSASGTA---VVSFGDGSQGALGLPTSLTGVGGDAYEPTR 58
+L++ + V V S + SA+ T + ++G+G G LG G PT
Sbjct: 502 KLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-----HGDSNSRNIPTL 556
Query: 59 VPGLPSDVTSVSAGHYHSLAVTNNG-AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLD 117
V + S+V VS G H++A++ +G VW++G + +LG G ++ + PK +E L
Sbjct: 557 VKDI-SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG--DTNRVYK-PKVIEALQ 612
Query: 118 QVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
+ + A S A+ G ++ WG LG G A+ P +E LA +IV +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDI 670
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRIG 205
S G H LA + D +++ WG ++ G+ G
Sbjct: 671 SIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 192 (72.6 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 59/191 (30%), Positives = 101/191 (52%)
Query: 20 FMRSASGTAVVSFGDGSQGALGLPTS--LTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSL 77
F+ S G+ V + G GS G LGL S + + +EP R V+S H+L
Sbjct: 416 FVISTDGS-VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI---KKVSSSKGSDGHTL 471
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVV-SSAIGD 136
A T G V++WG + +LG G + +T PK ++G Q V ++G S+A+ +
Sbjct: 472 AFTTEGEVFSWGDGDYGKLGHG---NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 137 DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGK-LFG 195
DG L+ WG+ G+LG G D +P+ V+ ++ + +VS G H +A ++DG+ ++
Sbjct: 529 DGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWS 585
Query: 196 WGYSADGRIGN 206
+G +G++G+
Sbjct: 586 FGGGDNGKLGH 596
Score = 186 (70.5 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 61/199 (30%), Positives = 85/199 (42%)
Query: 3 LLKSVVH-NHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG 61
L+K + + V+ +S S G V SFG G G LG G Y+P +
Sbjct: 556 LVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-----HGDTNRVYKPKVIEA 610
Query: 62 LPSD-VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVN 120
L + V AG SLA+T+ G V+AWG LG G+ S AT PK +E L
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGS--SEATALRPKLIEELAATR 666
Query: 121 VCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFG 180
+ A+ D ++ WG + GQ G G P +V L G I ++S G
Sbjct: 667 IVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726
Query: 181 WGHALAQT---EDGKLFGW 196
H+LA T D ++ W
Sbjct: 727 TSHSLAWTALPRDRQVVAW 745
Score = 176 (67.0 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 51/171 (29%), Positives = 78/171 (45%)
Query: 38 GALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLG 97
GA G L G + P P S V G + + NG V A G + +LG
Sbjct: 4001 GA-GRHGQLAEAGRNVMVPAAAPSF-SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLG 4058
Query: 98 RGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDI 157
+G + ++G + + S S A+ + G ++ WG G+LG G
Sbjct: 4059 QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSD 4118
Query: 158 TEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
+ P ++EAL GE++V++S G+ H+ T DGKLF +G GR+G LG
Sbjct: 4119 RQRR-PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLG-LG 4167
Score = 175 (66.7 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 45/153 (29%), Positives = 77/153 (50%)
Query: 55 EPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
+P P SD ++ AG Y + ++ +G+V A G+ + +LG G +++T
Sbjct: 395 QPKLAPSF-SDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEP 453
Query: 115 GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA-LAGEK 173
V ++ S + A +G ++ WG G+LG G T+ P ++ L G+
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKV 512
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
+V VS G+ H+ A TEDG+L+ WG GR+G+
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Score = 173 (66.0 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 57/194 (29%), Positives = 97/194 (50%)
Query: 20 FMRSASGTA---VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYH 75
F SA T+ + +FG+G G LGL G + P RV L + V+ G H
Sbjct: 4141 FKHSAVVTSDGKLFTFGNGDYGRLGL-----GNTSNKKLPERVTALEGYQIGQVACGLNH 4195
Query: 76 SLAVTNNGA-VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
+LAV+ +G+ VWA+G + +LG G ++++ P++V+ L + + S A+
Sbjct: 4196 TLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS---PQKVDVLCGIGIKKVACGTQFSVAL 4252
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
DG ++ +G+ + L G+ P ++ LAG I V+ G H LA G ++
Sbjct: 4253 TKDGHVYTFGQDRLIGLPEGRARNHNR-PQQIPVLAGVVIEDVAVGAEHTLALASTGDVY 4311
Query: 195 GWGYSADGRIGNLG 208
WG +++G++G LG
Sbjct: 4312 AWGSNSEGQLG-LG 4324
Score = 123 (48.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 43/138 (31%), Positives = 56/138 (40%)
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG 138
V+ V+ WG N+ QL G E PK A + I DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKIL---QPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 139 SLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGW-GHALAQTEDGKLFGW 196
S+ GK G+LGLG ++ + E K V S G GH LA T +G++F W
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 197 GYSADGRIGNLGKALESS 214
G DG G LG S+
Sbjct: 483 G---DGDYGKLGHGNSST 497
Score = 102 (41.0 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN----FHPVS 316
++G EVV ++CGF HS V+ +G L + G+ YG+LG P + +
Sbjct: 4129 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQ 4188
Query: 317 ISSGLGHSLAI 327
++ GL H+LA+
Sbjct: 4189 VACGLNHTLAV 4199
Score = 99 (39.9 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 36/136 (26%), Positives = 63/136 (46%)
Query: 240 KLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
KL +KY +I P ++G VV ++ G+ HS + +G L + G +G+LG
Sbjct: 489 KLGHGNSSTQKYPKLIQGP--LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 300 KQDMGMFPV---DINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM 356
+ P DI+ + +S G H++A+ + R + S+G + +LG
Sbjct: 547 DSNSRNIPTLVKDIS-NVGEVSCGSSHTIALSK--------DGRTVWSFGGGDNGKLGHG 597
Query: 357 GPDNV--PLVVEGLEG 370
+ V P V+E L+G
Sbjct: 598 DTNRVYKPKVIEALQG 613
Score = 91 (37.1 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 33/112 (29%), Positives = 50/112 (44%)
Query: 269 IACGFDHSLVLGRNGVLLSCGSNVYGQLGR-EKQDMGMFPVDINFHPVSI-----SSGL- 321
+ CG + + V+ NG +L+CG YG+LG+ D+ + V + S G
Sbjct: 4030 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4089
Query: 322 GHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEGE 371
GHS+A+ E G + SWG +LG D P +E L+GE
Sbjct: 4090 GHSMALTE-------SGE--VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE 4132
Score = 69 (29.3 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 30/116 (25%), Positives = 53/116 (45%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSN-VYG-QLGREKQDMG--MFPVDINFHPVSIS 318
G+ + +ACG S+ L ++G + + G + + G GR + PV ++
Sbjct: 4236 GIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVA 4295
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEGES 372
G H+LA+ TG + +WG N QLG ++V P +V L+G++
Sbjct: 4296 VGAEHTLALAS------TGD---VYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4342
Score = 67 (28.6 bits), Expect = 9.8e-14, Sum P(3) = 9.8e-14
Identities = 25/81 (30%), Positives = 37/81 (45%)
Query: 258 PFLVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG---------REKQDMGM 305
P L+E +VDI+ G H L L + + + G+N GQ G + K+ G+
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL 715
Query: 306 FPVDINFHPVSISSGLGHSLA 326
+ I IS+G HSLA
Sbjct: 716 DGIAIQ----QISAGTSHSLA 732
Score = 39 (18.8 bits), Expect = 9.8e-14, Sum P(3) = 9.8e-14
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 337 GGARGIVSWGWNRSSQLGRMG 357
GG + WG R QL G
Sbjct: 3992 GGKCDVYLWGAGRHGQLAEAG 4012
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 244 (91.0 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 91/299 (30%), Positives = 135/299 (45%)
Query: 20 FMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTS---VSAGHY-H 75
F+ A+GT V++ G+GS G LG G D + T + L V + S G H
Sbjct: 4040 FVIQANGT-VLACGEGSYGRLG-----QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4093
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
S+A+T +G V++WG + +LG G + + P+++E L V S+ +
Sbjct: 4094 SMALTESGEVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
DG L+ +G G+LGLG + + P RV AL G +I +V+ G H LA + DG +
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMV- 4208
Query: 196 WGYSADGRIGNLG---KALESSP--LD--SNXXXXXXXXXXXXXXXXXK--------AQK 240
W + DG G LG +SSP +D K +
Sbjct: 4209 WAFG-DGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4267
Query: 241 LVS--EGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
L+ EG + P P L GV + D+A G +H+L L NG + + GSN GQLG
Sbjct: 4268 LIGLPEGRARNHNRPQ-QIPVLA-GVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLG 4324
Score = 206 (77.6 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 63/175 (36%), Positives = 86/175 (49%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG-LPSDVT-SVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG S T Y P + G L V VSAG+ HS AVT +G ++
Sbjct: 479 VFSWGDGDYGKLGHGNSST----QKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG-SLWVWGK 145
WG + +LG G SR N P V+ + V + +S + A+ DG ++W +G
Sbjct: 534 TWGEGDFGRLGHGDSNSR---NIPTLVKDISNVGEVSCGSSHTI--ALSKDGRTVWSFGG 588
Query: 146 SKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
G+LG G D P +EAL G I KV G +LA T G+++ WG A
Sbjct: 589 GDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Score = 205 (77.2 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 61/208 (29%), Positives = 101/208 (48%)
Query: 2 RLLKSVVHNHVNVLTSRIFMRSASGTA---VVSFGDGSQGALGLPTSLTGVGGDAYEPTR 58
+L++ + V V S + SA+ T + ++G+G G LG G PT
Sbjct: 502 KLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-----HGDSNSRNIPTL 556
Query: 59 VPGLPSDVTSVSAGHYHSLAVTNNG-AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLD 117
V + S+V VS G H++A++ +G VW++G + +LG G ++ + PK +E L
Sbjct: 557 VKDI-SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG--DTNRVYK-PKVIEALQ 612
Query: 118 QVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
+ + A S A+ G ++ WG LG G A+ P +E LA +IV V
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDV 670
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRIG 205
S G H LA + D +++ WG ++ G+ G
Sbjct: 671 SIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 192 (72.6 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 59/191 (30%), Positives = 101/191 (52%)
Query: 20 FMRSASGTAVVSFGDGSQGALGLPTS--LTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSL 77
F+ S G+ V + G GS G LGL S + + +EP R V+S H+L
Sbjct: 416 FVISTDGS-VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI---KKVSSSKGSDGHTL 471
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVV-SSAIGD 136
A T G V++WG + +LG G + +T PK ++G Q V ++G S+A+ +
Sbjct: 472 AFTTEGEVFSWGDGDYGKLGHG---NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 137 DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGK-LFG 195
DG L+ WG+ G+LG G D +P+ V+ ++ + +VS G H +A ++DG+ ++
Sbjct: 529 DGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWS 585
Query: 196 WGYSADGRIGN 206
+G +G++G+
Sbjct: 586 FGGGDNGKLGH 596
Score = 187 (70.9 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 61/199 (30%), Positives = 85/199 (42%)
Query: 3 LLKSVVH-NHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG 61
L+K + + V+ +S S G V SFG G G LG G Y+P +
Sbjct: 556 LVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-----HGDTNRVYKPKVIEA 610
Query: 62 LPSD-VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVN 120
L + V AG SLA+T+ G V+AWG LG G+ S AT PK +E L
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGS--SEATALRPKLIEELAATR 666
Query: 121 VCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFG 180
+ A+ D ++ WG + GQ G G P +V L G I ++S G
Sbjct: 667 IVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726
Query: 181 WGHALAQT---EDGKLFGW 196
H+LA T D ++ W
Sbjct: 727 TSHSLAWTALPRDRQVVAW 745
Score = 176 (67.0 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 51/171 (29%), Positives = 78/171 (45%)
Query: 38 GALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLG 97
GA G L G + P P S V G + + NG V A G + +LG
Sbjct: 4003 GA-GRHGQLAEAGRNVMVPAAAPSF-SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLG 4060
Query: 98 RGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDI 157
+G + ++G + + S S A+ + G ++ WG G+LG G
Sbjct: 4061 QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSD 4120
Query: 158 TEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
+ P ++EAL GE++V++S G+ H+ T DGKLF +G GR+G LG
Sbjct: 4121 RQRR-PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLG-LG 4169
Score = 175 (66.7 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 45/153 (29%), Positives = 77/153 (50%)
Query: 55 EPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
+P P SD ++ AG Y + ++ +G+V A G+ + +LG G +++T
Sbjct: 395 QPKLAPSF-SDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEP 453
Query: 115 GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA-LAGEK 173
V ++ S + A +G ++ WG G+LG G T+ P ++ L G+
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKV 512
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
+V VS G+ H+ A TEDG+L+ WG GR+G+
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Score = 164 (62.8 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 48/167 (28%), Positives = 79/167 (47%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTN 81
SA G+ V +FGDG G LGL S P ++ L + V+ G S+A+T
Sbjct: 4202 SADGSMVWAFGDGDYGKLGLGNSTA-----KSSPQKIDVLCGIGIKKVACGTQFSVALTK 4256
Query: 82 NGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLW 141
+G V+ +G++ + L G + N P+++ L V + + A+ +G ++
Sbjct: 4257 DGHVYTFGQDRLIGLPEGRARNH---NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVY 4313
Query: 142 VWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT 188
WG + GQLGLG P+ V L G+ + ++S G H+ A T
Sbjct: 4314 AWGSNSEGQLGLGHT-NHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 123 (48.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 43/138 (31%), Positives = 56/138 (40%)
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG 138
V+ V+ WG N+ QL G E PK A + I DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKIL---QPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 139 SLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGW-GHALAQTEDGKLFGW 196
S+ GK G+LGLG ++ + E K V S G GH LA T +G++F W
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 197 GYSADGRIGNLGKALESS 214
G DG G LG S+
Sbjct: 483 G---DGDYGKLGHGNSST 497
Score = 102 (41.0 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN----FHPVS 316
++G EVV ++CGF HS V+ +G L + G+ YG+LG P + +
Sbjct: 4131 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQ 4190
Query: 317 ISSGLGHSLAI 327
++ GL H+LA+
Sbjct: 4191 VACGLNHTLAV 4201
Score = 99 (39.9 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 36/136 (26%), Positives = 63/136 (46%)
Query: 240 KLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
KL +KY +I P ++G VV ++ G+ HS + +G L + G +G+LG
Sbjct: 489 KLGHGNSSTQKYPKLIQGP--LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 300 KQDMGMFPV---DINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM 356
+ P DI+ + +S G H++A+ + R + S+G + +LG
Sbjct: 547 DSNSRNIPTLVKDIS-NVGEVSCGSSHTIALSK--------DGRTVWSFGGGDNGKLGHG 597
Query: 357 GPDNV--PLVVEGLEG 370
+ V P V+E L+G
Sbjct: 598 DTNRVYKPKVIEALQG 613
Score = 91 (37.1 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 33/112 (29%), Positives = 50/112 (44%)
Query: 269 IACGFDHSLVLGRNGVLLSCGSNVYGQLGR-EKQDMGMFPVDINFHPVSI-----SSGL- 321
+ CG + + V+ NG +L+CG YG+LG+ D+ + V + S G
Sbjct: 4032 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4091
Query: 322 GHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEGE 371
GHS+A+ E G + SWG +LG D P +E L+GE
Sbjct: 4092 GHSMALTE-------SGE--VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE 4134
Score = 77 (32.2 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 32/116 (27%), Positives = 56/116 (48%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSN-VYG-QLGREKQDMG--MFPVDINFHPVSIS 318
G+ + +ACG S+ L ++G + + G + + G GR + PV ++
Sbjct: 4238 GIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVA 4297
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEGES 372
G H+LA+ +SN G + +WG N QLG ++V P +V GL+G++
Sbjct: 4298 VGAEHTLAL----ASN--G---DVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4344
Score = 66 (28.3 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 24/81 (29%), Positives = 37/81 (45%)
Query: 258 PFLVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG---------REKQDMGM 305
P L+E +VD++ G H L L + + + G+N GQ G + K+ G+
Sbjct: 656 PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL 715
Query: 306 FPVDINFHPVSISSGLGHSLA 326
+ I IS+G HSLA
Sbjct: 716 DGIAIQ----QISAGTSHSLA 732
Score = 39 (18.8 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 337 GGARGIVSWGWNRSSQLGRMG 357
GG + WG R QL G
Sbjct: 3994 GGKCDVYLWGAGRHGQLAEAG 4014
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 244 (91.0 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 102/344 (29%), Positives = 156/344 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VTSVSAGHYHSLAVTNNGAVW 86
++ +G S G G+ T+L G+ EP +V G SD V V+ G HS+ + +G V+
Sbjct: 1 MLCWGYWSLGQPGISTNLQGI---VAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVY 56
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
G N + QLG E N P+++ L ++ S A+ D G L+ WG
Sbjct: 57 TCGLNTKGQLGH---EREG--NKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
GQLGL VP ++ L + I++VS G H LA DG+ F WG ++ G++G
Sbjct: 112 SDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLG- 170
Query: 207 LGKALES--SPLDSNXXXXXXXXXXXXXXXXXKAQKLVSE----GM----------EKEK 250
LGK S SP A L GM EK++
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR 230
Query: 251 YMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP--- 307
P + L+ +VV I+CG +H+ VL ++G + + G+ GQLG + + + P
Sbjct: 231 ESPCHVK--LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Query: 308 VDINFHPVS-ISSGLGHSLAICEVRSSNVT---G-GARGIVSWG 346
+++ V+ I+ G H+LA V SS + G GARG + G
Sbjct: 289 LELMGSEVTQIACGRQHTLAF--VPSSGLIYAFGCGARGQLGTG 330
Score = 123 (48.4 bits), Expect = 0.00034, P = 0.00034
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVSISSGL 321
V ++ACG +HS+ L +G + +CG N GQLG E++ G P I H + ++ G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHERE--GNKPEQIGALADQHIIHVACGE 93
Query: 322 GHSLAICEVRSSNVTGGARG-IVSWGWNRSSQLGRMGPDN---VPLVVEGLEGES 372
HSLA+ + RG + SWG QLG M ++ VP +++ L ++
Sbjct: 94 SHSLALSD----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQT 138
Score = 123 (48.4 bits), Expect = 0.00034, P = 0.00034
Identities = 49/225 (21%), Positives = 89/225 (39%)
Query: 143 WGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVK-VSFGWGHALAQTEDGKLFGWGYSAD 201
WG GQ G+ ++ + +V ++ VK V+ G H++ EDG+++ G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 202 GRIGNL---GKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIWE- 257
G++G+ K + L + Q L S G + + ++
Sbjct: 64 GQLGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQ-LFSWGAGSDGQLGLMTTE 122
Query: 258 -----PFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD 309
P L++ + ++ ++CG H L L +G + G N +GQLG K+ FP
Sbjct: 123 DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE----FPSQ 178
Query: 310 INFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
+ V G+ + S + + WG N + QLG
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 181 (68.8 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 55/175 (31%), Positives = 83/175 (47%)
Query: 42 LPTSLTGV---GGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW-----GRNNE 93
+P L+ V GG P R+P ++V V+AG VT +G + W G
Sbjct: 313 IPPPLSSVYAWGGGLSIPLRLPMPNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGG 372
Query: 94 VQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGL 153
L GA+E + +EG V + + ++ + D G + +G G LG
Sbjct: 373 TLLP-GAVELPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGH 431
Query: 154 GKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
G +T+ P+ VEAL G ++V+V+ G H LA + DG+LF WG GR+G LG
Sbjct: 432 GS-LTDISQPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLG-LG 484
Score = 158 (60.7 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 60/202 (29%), Positives = 96/202 (47%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
+++FG GS G LG SLT D +PT V L ++ V+ G H LA++ +G ++A
Sbjct: 418 IMTFGSGSNGCLG-HGSLT----DISQPTIVEALLGYEMVQVACGASHVLALSADGELFA 472
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLD-QVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WGR + +LG G ES V G + Q VC S +++S G + G +
Sbjct: 473 WGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQRVVCGIDCSMILTSP----GRVLACGSN 528
Query: 147 KRGQLGLG-KDITEAIVPSRV--EALA----G------EKIVKVSFGWGHALAQTEDGKL 193
+ +LGL + E VP + EAL+ G E ++ V G H+ A T G
Sbjct: 529 RFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGAC 588
Query: 194 FGWGYSADGRIGNLGKALESSP 215
+ +G + G++G + + +P
Sbjct: 589 YTFGSNQHGQLGTSSRRVSRAP 610
Score = 149 (57.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 58/203 (28%), Positives = 95/203 (46%)
Query: 17 SRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHY 74
S + SA G + ++G G G LGL T +++ P +VP +P + V G
Sbjct: 459 SHVLALSADGE-LFAWGRGDGGRLGLGTR------ESHNCPQQVPMVPGQEAQRVVCGID 511
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE--------G---LDQVNVCA 123
S+ +T+ G V A G N +LG L ++VE G LD+ +
Sbjct: 512 CSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLC 571
Query: 124 AFASGVVSSAIGDDGSLWVWGKSKRGQLGLG-KDITEAIVPSRVEALAGEKIVKVSFGWG 182
S+A+ G+ + +G ++ GQLG + ++ A P RV+ L G K+V V+ G
Sbjct: 572 VDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRA--PCRVQGLEGIKMVMVACGDA 629
Query: 183 HALAQTEDGKLFGWGYSADGRIG 205
+A +G+++ WG A GR+G
Sbjct: 630 FTVAIGAEGEVYSWGKGARGRLG 652
Score = 110 (43.8 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 37/124 (29%), Positives = 57/124 (45%)
Query: 260 LVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD-------INF 312
+V G E + CG D S++L G +L+CGSN + +LG + + PV ++F
Sbjct: 497 MVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSF 556
Query: 313 HPVSISSGLGHSLAIC----EVRSSNVTGGARGIVSWGWNRSSQLGRMGP--DNVPLVVE 366
P+ S+ L +C S+ VT ++G N+ QLG P V+
Sbjct: 557 TPLG-SAPLDRETLLCVDLGTAHSAAVTASG-ACYTFGSNQHGQLGTSSRRVSRAPCRVQ 614
Query: 367 GLEG 370
GLEG
Sbjct: 615 GLEG 618
Score = 108 (43.1 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM-FPVDIN-FHPVSIS 318
+EG+++V +ACG ++ +G G + S G G+LGR +D G+ PV ++ HP +++
Sbjct: 616 LEGIKMVMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVT 675
Query: 319 S-GLGHSLAICEVRS 332
S H + VRS
Sbjct: 676 SVSCCHGNTLLAVRS 690
Score = 81 (33.6 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 33/122 (27%), Positives = 51/122 (41%)
Query: 247 EKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF 306
E + P+ P E + VD+ G HS + +G + GSN +GQLG + +
Sbjct: 552 EALSFTPLGSAPLDRETLLCVDL--GTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRA 609
Query: 307 PVDINFHPVSISSGLGHSLAICEVRSSNVTGGARG-IVSWGWNRSSQLGRMGPD-NVPLV 364
P + G+ + C + V GA G + SWG +LGR D +P
Sbjct: 610 PCRVQG-----LEGIKMVMVACG-DAFTVAIGAEGEVYSWGKGARGRLGRRDEDAGLPRP 663
Query: 365 VE 366
V+
Sbjct: 664 VQ 665
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 243 (90.6 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 62/194 (31%), Positives = 97/194 (50%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNG 83
+ G + ++G G LG+ + G+P + +SAG HS+A++ +G
Sbjct: 154 SKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVE-HLAGVP--LAQISAGEAHSMALSMSG 210
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
+++WG+N QLG G ES+ +DP +EGLD V G S+ + DG L+ +
Sbjct: 211 NIYSWGKNECGQLGLGHTESK---DDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTED-GKLFGWGYSADG 202
G K GQLG E + P V L G ++ +++ G H LA D GK+F +G DG
Sbjct: 268 GAGKHGQLGHNSTQNE-LRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDG 326
Query: 203 RIGNLGKALESSPL 216
++GN G + PL
Sbjct: 327 QLGNGGTRDQLMPL 340
Score = 214 (80.4 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 54/151 (35%), Positives = 81/151 (53%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
+ ++ G YHSLA++ G ++AWG+N QLG G T P+ VE L V +
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTT--TPQIVEHLAGVPLAQIS 197
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIV-PSRVEALAGEKIVKVSFGWGHA 184
A S A+ G+++ WGK++ GQLGLG TE+ PS +E L +K+ V+ G H+
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNECGQLGLGH--TESKDDPSLIEGLDNQKVEFVACGGSHS 255
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
T+DG LF +G G++G+ E P
Sbjct: 256 ALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 286
Score = 124 (48.7 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 37/119 (31%), Positives = 63/119 (52%)
Query: 260 LVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH----PV 315
+++ +++ I CG HSL L + G L + G N++GQLG ++ I H P+
Sbjct: 134 ILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPL 193
Query: 316 S-ISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEGE 371
+ IS+G HS+A+ +++G I SWG N QLG ++ P ++EGL+ +
Sbjct: 194 AQISAGEAHSMAL------SMSGN---IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQ 243
Score = 99 (39.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 35/119 (29%), Positives = 60/119 (50%)
Query: 257 EPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI--- 310
+P L+EG++ V +ACG HS +L ++G+L + G+ +GQLG + P +
Sbjct: 233 DPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL 292
Query: 311 -NFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--VPLVVE 366
+ I+ G H+LA S++ G + S+G + QLG G + +PL V+
Sbjct: 293 VGYRVTQIACGRWHTLAYV----SDL--GK--VFSFGSGKDGQLGNGGTRDQLMPLPVK 343
Score = 85 (35.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 165 RVEALAGEK-IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESS 214
R E++ EK I++++ G H+LA ++ G+LF WG + G++G +G+ S+
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLG-VGRKFPST 179
Score = 40 (19.1 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 160 AIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGW-GYS 199
A P ++ KI V G H L + DGK F + YS
Sbjct: 85 ARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS 125
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 243 (90.6 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 101/342 (29%), Positives = 154/342 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VTSVSAGHYHSLAVTNNGAVW 86
++ +G S G G+ T+L G+ EP +V G SD V V+ G HS+ + +G V+
Sbjct: 1 MLCWGYWSLGQPGISTNLQGI---VAEP-QVCGFISDRSVKEVACGGDHSVFLLEDGEVY 56
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
G N + QLG E N P+++ L ++ S A+ D G L+ WG
Sbjct: 57 TCGLNTKGQLGH---EREG--NKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAG 111
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
GQLGL VP ++ L + I++VS G H LA DG+ F WG ++ G++G
Sbjct: 112 SDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLG- 170
Query: 207 LGKALES--SPLDSNXXXXXXXXXXXXXXXXXKAQKLVSE----GMEKEKYMPIIWE--- 257
LGK S SP A L GM + + E
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDR 230
Query: 258 --PF---LVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP---VD 309
P L+ +VV I+CG +H+ VL ++G + + G+ GQLG + + + P ++
Sbjct: 231 ESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLE 290
Query: 310 INFHPVS-ISSGLGHSLAICEVRSSNVT---G-GARGIVSWG 346
+ V+ I+ G H+LA V SS + G GARG + G
Sbjct: 291 LMGSEVTQIACGRQHTLAF--VPSSGLIYAFGCGARGQLGTG 330
Score = 128 (50.1 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 39/115 (33%), Positives = 58/115 (50%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVSISSGL 321
V ++ACG DHS+ L +G + +CG N GQLG E++ G P I H V ++ G
Sbjct: 36 VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHERE--GNKPEQIGALADEHIVHVACGE 93
Query: 322 GHSLAICEVRSSNVTGGARG-IVSWGWNRSSQLGRMGPDN---VPLVVEGLEGES 372
HSLA+ + RG + SWG QLG M + VP +++ L ++
Sbjct: 94 SHSLALSD----------RGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQT 138
Score = 122 (48.0 bits), Expect = 0.00044, P = 0.00044
Identities = 49/225 (21%), Positives = 89/225 (39%)
Query: 143 WGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVK-VSFGWGHALAQTEDGKLFGWGYSAD 201
WG GQ G+ ++ + +V ++ VK V+ G H++ EDG+++ G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63
Query: 202 GRIGNL---GKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIWE- 257
G++G+ K + L + Q L S G + + ++
Sbjct: 64 GQLGHEREGNKPEQIGALADEHIVHVACGESHSLALSDRGQ-LFSWGAGSDGQLGLMTTE 122
Query: 258 -----PFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD 309
P L++ + ++ ++CG H L L +G + G N +GQLG K+ FP
Sbjct: 123 ESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE----FPSQ 178
Query: 310 INFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
+ V G+ + S + + WG N + QLG
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 218 (81.8 bits), Expect = 8.6e-18, Sum P(2) = 8.6e-18
Identities = 67/209 (32%), Positives = 105/209 (50%)
Query: 17 SRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG--LPSDVTSVSAGHY 74
S I + ++ G ++++G S LG +T P R+P +P D+ S+S+G Y
Sbjct: 705 SAIHLDTSRG--LMTWGSASNCKLGF--KVTAKDQSQPTPERLPNFNIP-DICSISSGSY 759
Query: 75 HSLAVTNNGAVWAWGRNNEVQ-----LGRGALESRATWNDPKRVEGL-DQVNVCAAFASG 128
+S +T NG V+ WGR LG +E + P ++E L D V+V F G
Sbjct: 760 YSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLL---PFKLESLSDVVSVSIGFCHG 816
Query: 129 VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT 188
+A+ +G L WG + GQLG G D I P +++L I +V G H + T
Sbjct: 817 ---AAVRANGELLTWGVGENGQLGHG-DTNNQIEPKIIQSLTSFWITQVQCGEKHTICLT 872
Query: 189 EDGKLFGWGYSADGRIGNLGKALE-SSPL 216
++GK++ WG S G++G LG + SSP+
Sbjct: 873 KNGKVYSWGASEYGQLG-LGDVTQHSSPM 900
Score = 146 (56.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 49/168 (29%), Positives = 78/168 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
V+ FG+G+ A+G S+ + PT VP L + + GHY + A+T G V+
Sbjct: 929 VLVFGNGA--AMGA-ASVVSL------PTLVPSLKYLHIDRLCCGHYSTAAITECGDVYT 979
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG E LG G +T PK +E L ++ G ++ + D G ++ GK
Sbjct: 980 WGTGQE--LGHGG---NSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDS 1034
Query: 148 RGQLG-LGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
GQLG + D + P R+E+L + VS G + +A + + F
Sbjct: 1035 FGQLGQMSGDQNK---PKRIESLTKTTFISVSCGENYNVALFDTTRSF 1079
Score = 143 (55.4 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 41/170 (24%), Positives = 80/170 (47%)
Query: 41 GLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGA 100
G T T G + P P S S S H ++ + + + WG + +LG
Sbjct: 675 GSSTGTTPTDGFSSSP---PNGQSPSLS-STAHRSAIHLDTSRGLMTWGSASNCKLGFKV 730
Query: 101 LESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS--KRGQLG-LG-KD 156
+ P+R+ + ++C+ + SS + ++G +++WG+ K + LG
Sbjct: 731 TAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQ 790
Query: 157 ITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
I + ++P ++E+L+ +V VS G+ H A +G+L WG +G++G+
Sbjct: 791 IEDQLLPFKLESLSD--VVSVSIGFCHGAAVRANGELLTWGVGENGQLGH 838
Score = 135 (52.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 47/180 (26%), Positives = 84/180 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
V S+G G LGL G P +V L +V +++G H +T + V
Sbjct: 877 VYSWGASEYGQLGL-----GDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLV 931
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
+G N +G ++ S T + +D++ C +++ +AI + G ++ WG +
Sbjct: 932 FG--NGAAMGAASVVSLPTLVPSLKYLHIDRL-CCGHYST----AAITECGDVYTWGTGQ 984
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNL 207
+LG G + TE P +EAL + I ++S G H T+ G++F G + G++G +
Sbjct: 985 --ELGHGGNSTETS-PKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQM 1041
Score = 89 (36.4 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 25/97 (25%), Positives = 46/97 (47%)
Query: 257 EPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN-- 311
EP +++ + + + CG H++ L +NG + S G++ YGQLG P+ ++
Sbjct: 846 EPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSAL 905
Query: 312 --FHPVSISSGLGHSLAICEVRSSNV--TGGARGIVS 344
++ + I+SG H + + V G A G S
Sbjct: 906 EKYNVLQIASGSTHCAVLTTSKEVLVFGNGAAMGAAS 942
Score = 78 (32.5 bits), Expect = 8.6e-18, Sum P(2) = 8.6e-18
Identities = 23/83 (27%), Positives = 41/83 (49%)
Query: 258 PFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHP 314
P L+E + + I+CG H+ L +G + +CG + +GQLG+ D P I
Sbjct: 997 PKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQNK-PKRIESLT 1055
Query: 315 ----VSISSGLGHSLAICEVRSS 333
+S+S G +++A+ + S
Sbjct: 1056 KTTFISVSCGENYNVALFDTTRS 1078
Score = 37 (18.1 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 347 WNRSSQLGRMG--PDNVPLVVEGLEGES 372
W +LG G + P ++E L +S
Sbjct: 980 WGTGQELGHGGNSTETSPKLIEALRNQS 1007
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 242 (90.2 bits), Expect = 9.4e-18, P = 9.4e-18
Identities = 105/361 (29%), Positives = 160/361 (44%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VTSVSAGHYHSLAVTNNGAVW 86
++ +G S G G+ T+L G+ EP +V G SD V V+ G HS+ + +G V+
Sbjct: 1 MLCWGYWSLGQPGISTNLQGI---VAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVY 56
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
G N + QLG E N P+++ L ++ S A+ D G L+ WG
Sbjct: 57 TCGLNTKGQLGH---EREG--NKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAG 111
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
GQLGL VP ++ L + I++VS G H LA DG+ F WG ++ G++G
Sbjct: 112 SDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLG- 170
Query: 207 LGKALES--SPLDSNXXXXXXXXXXXXXXXXXKAQKLVSE----GMEKEKYMPIIWE--- 257
LGK S SP A L GM + + E
Sbjct: 171 LGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDR 230
Query: 258 --PF---LVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP---VD 309
P L+ +VV I+CG +H+ VL ++G + + G+ GQLG + + + P ++
Sbjct: 231 ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLE 290
Query: 310 INFHPVS-ISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVE 366
+ V+ I+ G H+LA V SS + I ++G QLG NV P V+
Sbjct: 291 LMGSEVTQIACGRQHTLAF--VPSSGL------IYAFGCGAKGQLGTGHTCNVKCPSPVK 342
Query: 367 G 367
G
Sbjct: 343 G 343
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 38/115 (33%), Positives = 59/115 (51%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVSISSGL 321
V ++ACG +HS+ L +G + +CG N GQLG E++ G P I H V ++ G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHERE--GNKPEQIGALADQHIVHVACGE 93
Query: 322 GHSLAICEVRSSNVTGGARG-IVSWGWNRSSQLGRMGPDN---VPLVVEGLEGES 372
HSLA+ + RG + SWG QLG M ++ VP +++ L ++
Sbjct: 94 SHSLALSD----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQT 138
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 228 (85.3 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 87/300 (29%), Positives = 135/300 (45%)
Query: 20 FMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTS---VSAGHY-H 75
F+ A+GT V++ G+GS G LG G D + T + L V + S G H
Sbjct: 4040 FVIQANGT-VLACGEGSYGRLG-----QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4093
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
S+A+T +G V++WG + +LG G + + + ++G + V + F V +A
Sbjct: 4094 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA-- 4151
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
DG L+ +G G+LGLG + + P RV AL G +I +V+ G H +A + DG +
Sbjct: 4152 -DGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMV- 4208
Query: 196 WGYS-AD-GRIGNLGKALESSP--LD------------SNXXXXXXXXXXXXXXXXXKAQ 239
W + D G++G +SSP +D +
Sbjct: 4209 WAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSD 4268
Query: 240 KLVS--EGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+L+ EG + P P L GV + DIA G +H+L L G + + GSN GQLG
Sbjct: 4269 RLIGLPEGRARNHNRPQ-QVPVL-SGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLG 4326
Score = 206 (77.6 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 63/175 (36%), Positives = 86/175 (49%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG-LPSDVT-SVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG S T Y P + G L V VSAG+ HS AVT +G ++
Sbjct: 479 VFSWGDGDYGKLGHGNSST----QKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG-SLWVWGK 145
WG + +LG G SR N P V+ + V + +S + A+ DG ++W +G
Sbjct: 534 TWGEGDFGRLGHGDSNSR---NIPTLVKDISNVGEVSCGSSHTI--ALSKDGRTVWSFGG 588
Query: 146 SKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
G+LG G D P +EAL G I KV G +LA T G+++ WG A
Sbjct: 589 GDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Score = 204 (76.9 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 60/208 (28%), Positives = 101/208 (48%)
Query: 2 RLLKSVVHNHVNVLTSRIFMRSASGTA---VVSFGDGSQGALGLPTSLTGVGGDAYEPTR 58
+L++ + V V S + SA+ T + ++G+G G LG G PT
Sbjct: 502 KLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-----HGDSNSRNIPTL 556
Query: 59 VPGLPSDVTSVSAGHYHSLAVTNNG-AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLD 117
V + S+V VS G H++A++ +G VW++G + +LG G ++ + PK +E L
Sbjct: 557 VKDI-SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG--DTNRVYK-PKVIEALQ 612
Query: 118 QVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
+ + A S A+ G ++ WG LG G A+ P +E LA +IV +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDI 670
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRIG 205
S G H LA + D +++ WG ++ G+ G
Sbjct: 671 SIGDSHCLALSHDNEVYAWGNNSMGQCG 698
Score = 192 (72.6 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 59/191 (30%), Positives = 101/191 (52%)
Query: 20 FMRSASGTAVVSFGDGSQGALGLPTS--LTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSL 77
F+ S G+ V + G GS G LGL S + + +EP R V+S H+L
Sbjct: 416 FVISTDGS-VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI---KKVSSSKGSDGHTL 471
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVV-SSAIGD 136
A T G V++WG + +LG G + +T PK ++G Q V ++G S+A+ +
Sbjct: 472 AFTTEGEVFSWGDGDYGKLGHG---NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 137 DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGK-LFG 195
DG L+ WG+ G+LG G D +P+ V+ ++ + +VS G H +A ++DG+ ++
Sbjct: 529 DGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWS 585
Query: 196 WGYSADGRIGN 206
+G +G++G+
Sbjct: 586 FGGGDNGKLGH 596
Score = 188 (71.2 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 61/199 (30%), Positives = 85/199 (42%)
Query: 3 LLKSVVH-NHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG 61
L+K + + V+ +S S G V SFG G G LG G Y+P +
Sbjct: 556 LVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-----HGDTNRVYKPKVIEA 610
Query: 62 LPSD-VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVN 120
L + V AG SLA+T+ G V+AWG LG G+ S AT PK +E L
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGS--SEATALRPKLIEELAATR 666
Query: 121 VCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFG 180
+ A+ D ++ WG + GQ G G P +V L G I ++S G
Sbjct: 667 IVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAG 726
Query: 181 WGHALAQT---EDGKLFGW 196
H+LA T D ++ W
Sbjct: 727 TSHSLAWTALPRDRQVVAW 745
Score = 183 (69.5 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 86/341 (25%), Positives = 139/341 (40%)
Query: 55 EPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
+P P SD ++ AG Y + ++ +G+V A G+ + +LG G +++T
Sbjct: 395 QPKLAPSF-SDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEP 453
Query: 115 GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA-LAGEK 173
V ++ S + A +G ++ WG G+LG G T+ P ++ L G+
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKV 512
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPL---DSNXXXXXXXXXXX 230
+V VS G+ H+ A TEDG+L+ WG GR+G+ + P D +
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSH 572
Query: 231 XXXXXXKAQKLVS-EGMEKEKY----MPIIWEPFLVE---GVEVVDIACGFDHSLVLGRN 282
+ + S G + K +++P ++E G+ + + G SL L
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST 632
Query: 283 GVL--------LSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSN 334
G + L CGS+ L R K + I V IS G H LA+
Sbjct: 633 GQVYAWGCGACLGCGSSEATAL-RPKLIEELAATRI----VDISIGDSHCLALSHDNE-- 685
Query: 335 VTGGARGIVSWGWNRSSQLGR---MGPDNVPLVVEGLEGES 372
+ +WG N Q G+ GP P V GL+G S
Sbjct: 686 -------VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVS 719
Score = 175 (66.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 51/171 (29%), Positives = 78/171 (45%)
Query: 38 GALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLG 97
GA G L G + P P S V G + + NG V A G + +LG
Sbjct: 4003 GA-GRHGQLAEAGRNVMVPVAAPSF-SQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLG 4060
Query: 98 RGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDI 157
+G + ++G + + S S A+ + G ++ WG G+LG G
Sbjct: 4061 QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSD 4120
Query: 158 TEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
+ P ++EAL GE++V++S G+ H+ T DGKLF +G GR+G LG
Sbjct: 4121 RQRR-PRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLG-LG 4169
Score = 158 (60.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 51/168 (30%), Positives = 79/168 (47%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTN 81
S G+ V +FGDG G LGL S P +V L + V+ G S+A+T
Sbjct: 4202 STDGSMVWAFGDGDYGKLGLGNSTA-----KSSPQKVDILCGIGIKKVACGTQFSVALTK 4256
Query: 82 NGAVWAWGRNNEVQLGRGALESRA-TWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSL 140
+G V+ +G+ ++ +G E RA N P++V L V + + A+ G +
Sbjct: 4257 DGHVYTFGQVSDRLIGLP--EGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDV 4314
Query: 141 WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT 188
+ WG + GQLGLG P+ + L G+ I ++S G H+ A T
Sbjct: 4315 YAWGSNSEGQLGLGHT-NHVREPTLITVLQGKNIRQISAGRCHSAAWT 4361
Score = 123 (48.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 43/138 (31%), Positives = 56/138 (40%)
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG 138
V+ V+ WG N+ QL G E PK A + I DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKIL---QPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 139 SLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGW-GHALAQTEDGKLFGW 196
S+ GK G+LGLG ++ + E K V S G GH LA T +G++F W
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 197 GYSADGRIGNLGKALESS 214
G DG G LG S+
Sbjct: 483 G---DGDYGKLGHGNSST 497
Score = 99 (39.9 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN----FHPVS 316
++G EVV ++CGF HS V+ +G L + G+ YG+LG P + +
Sbjct: 4131 LQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQ 4190
Query: 317 ISSGLGHSLAI 327
++ GL H++A+
Sbjct: 4191 VACGLNHTVAV 4201
Score = 92 (37.4 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 33/112 (29%), Positives = 50/112 (44%)
Query: 269 IACGFDHSLVLGRNGVLLSCGSNVYGQLGR-EKQDMGMFPVDINFHPVSI-----SSGL- 321
+ CG + + V+ NG +L+CG YG+LG+ D+ + V + S G
Sbjct: 4032 VVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4091
Query: 322 GHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEGE 371
GHS+A+ E G + SWG +LG D P +E L+GE
Sbjct: 4092 GHSMALTE-------SGE--VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE 4134
Score = 70 (29.7 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 258 PFLVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF-PVDIN-F 312
P L+E +VDI+ G H L L + + + G+N GQ G+ + P ++
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL 715
Query: 313 HPVSI---SSGLGHSLA 326
VSI S+G HSLA
Sbjct: 716 DGVSIQQISAGTSHSLA 732
Score = 65 (27.9 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQL-----GREKQDMG--MFPVDINFHPV 315
G+ + +ACG S+ L ++G + + G V +L GR + PV
Sbjct: 4238 GIGIKKVACGTQFSVALTKDGHVYTFGQ-VSDRLIGLPEGRARNHNRPQQVPVLSGVFIE 4296
Query: 316 SISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEGES 372
I+ G H+LA+ SS TG + +WG N QLG ++V P ++ L+G++
Sbjct: 4297 DIAVGAEHTLAL----SS--TGD---VYAWGSNSEGQLGLGHTNHVREPTLITVLQGKN 4346
Score = 39 (18.8 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 337 GGARGIVSWGWNRSSQLGRMG 357
GG + WG R QL G
Sbjct: 3994 GGKCDVYLWGAGRHGQLAEAG 4014
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 216 (81.1 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 58/175 (33%), Positives = 94/175 (53%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVPGL-PSDVTSVSAGHYHSLAVTNNGAVWAWGR 90
FG + G LGL S + + +PT V L P V + G H+L T G V+A G
Sbjct: 59 FGSNNWGQLGLG-SKSAIS----KPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 91 NNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQ 150
NNE QLG G E R T++ ++ +A ++ S+A+ +DG L++WG + GQ
Sbjct: 114 NNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSN--TSAALTEDGRLFMWGDNSEGQ 171
Query: 151 LGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
+GL K+++ VP +V G+ + +S G+ H+ T DG+L+ +G +G++G
Sbjct: 172 IGL-KNVSNVCVPQQVTI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLG 223
Score = 170 (64.9 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 51/146 (34%), Positives = 78/146 (53%)
Query: 64 SDV-TSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL--DQVN 120
+DV +S G HS VT N ++ +G NN QLG G S++ + P V+ L ++V
Sbjct: 34 NDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTCVKALKPEKVK 90
Query: 121 VCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGE-KIVKVSF 179
+ A + + S G G+++ G + GQLGLG D E + E KI ++S
Sbjct: 91 LAACGRNHTLVSTEG--GNVYATGGNNEGQLGLG-DTEERNTFHVISFFTSEHKIKQLSA 147
Query: 180 GWGHALAQTEDGKLFGWGYSADGRIG 205
G + A TEDG+LF WG +++G+IG
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIG 173
Score = 161 (61.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 54/185 (29%), Positives = 93/185 (50%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVP-GLPSDVTSVSAGHYHSLAVTNNGAVWAWGR 90
+GD S+G +GL +++ V P +V G P V+ +S G+YHS VT +G ++ +G
Sbjct: 164 WGDNSEGQIGLK-NVSNV----CVPQQVTIGKP--VSWISCGYYHSAFVTTDGELYVFGE 216
Query: 91 NNEVQLGRGALESRATWND--PKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKR 148
+LG L ++ N P+ V + + + A G + + + +++ +G +
Sbjct: 217 PENGKLG---LPNQLLGNHRTPQLVSEIPEKVI--QVACGGEHTVVLTENAVYTFGLGQF 271
Query: 149 GQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
GQLGLG + E P +E + + I +S G H T+ G ++ +G DGR G LG
Sbjct: 272 GQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG---DGRHGKLG 328
Query: 209 KALES 213
LE+
Sbjct: 329 LGLEN 333
Score = 140 (54.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 58/201 (28%), Positives = 99/201 (49%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTR---VPGLPSD--VTSVSAGHYHSL 77
S G V + G ++G LGL GD E + S+ + +SAG S
Sbjct: 102 STEGGNVYATGGNNEGQLGL--------GDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVN--VCAAFASGVVSSAIG 135
A+T +G ++ WG N+E Q+G L++ + P++V V+ C + S V++
Sbjct: 154 ALTEDGRLFMWGDNSEGQIG---LKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTT--- 207
Query: 136 DDGSLWVWGKSKRGQLGLGKDIT-EAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
DG L+V+G+ + G+LGL + P V + EK+++V+ G H + TE+ ++
Sbjct: 208 -DGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIP-EKVIQVACGGEHTVVLTENA-VY 264
Query: 195 GWGYSADGRIGNLGKAL-ESS 214
+G G++G LG L E+S
Sbjct: 265 TFGLGQFGQLG-LGTFLFETS 284
Score = 128 (50.1 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 57/217 (26%), Positives = 93/217 (42%)
Query: 131 SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIV-PSRVEALAGEKIVKVSFGWGHALAQTE 189
S+ + + L+++G + GQLGLG AI P+ V+AL EK+ + G H L TE
Sbjct: 47 SAVVTGNNKLYMFGSNNWGQLGLGSK--SAISKPTCVKALKPEKVKLAACGRNHTLVSTE 104
Query: 190 DGKLFGWGYSADGRIGNLGKALESSPLD------SNXXXXXXXXXXXXXXXXXKAQKLV- 242
G ++ G + +G++G LG E + S + +L
Sbjct: 105 GGNVYATGGNNEGQLG-LGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFM 163
Query: 243 ----SEGMEKEKYMPIIWEPFLVE-GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
SEG K + + P V G V I+CG+ HS + +G L G G+LG
Sbjct: 164 WGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLG 223
Query: 298 REKQDMGMF--PVDINFHP---VSISSGLGHSLAICE 329
Q +G P ++ P + ++ G H++ + E
Sbjct: 224 LPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Score = 72 (30.4 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 258 PFLVEGV--EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
P LV + +V+ +ACG +H++VL N V + G +GQLG
Sbjct: 235 PQLVSEIPEKVIQVACGGEHTVVLTENAVY-TFGLGQFGQLG 275
Score = 57 (25.1 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 12/44 (27%), Positives = 26/44 (59%)
Query: 257 EPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
EP ++E + + I+CG +H+ ++ G++ + G +G+LG
Sbjct: 285 EPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLG 328
Score = 38 (18.4 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 239 QKLVSEGMEKEKYMPII 255
+KL+ +G EKE PII
Sbjct: 759 RKLIEQGNEKET-KPII 774
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 220 (82.5 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 58/175 (33%), Positives = 91/175 (52%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVPGL-PSDVTSVSAGHYHSLAVTNNGAVWAWGR 90
FG + G LGL G +PT + L P V + G H+L T+ G V+A G
Sbjct: 59 FGSNNWGQLGL-----GSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGG 113
Query: 91 NNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQ 150
NNE QLG G + R T++ D + +A A+ S+A+ +DG L++WG + GQ
Sbjct: 114 NNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGAN--TSAALTEDGKLFMWGDNSEGQ 171
Query: 151 LGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
+GL +D + +P E G+ I +S G+ H+ T DG+L+ +G +G++G
Sbjct: 172 IGL-EDKSNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLG 223
Score = 179 (68.1 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 55/183 (30%), Positives = 88/183 (48%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVP-GLPSDVTSVSAGHYHSLAVTNNGAVWAWGR 90
+GD S+G +GL + P V G P ++ +S G+YHS VT +G ++ +G
Sbjct: 164 WGDNSEGQIGLEDK-----SNVCIPHEVTVGKP--ISWISCGYYHSAFVTMDGELYTFGE 216
Query: 91 NNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQ 150
+LG E P+RV G+ + + A G + + + ++ +G + GQ
Sbjct: 217 PENGKLGLPN-ELLMNHRSPQRVLGIPERVIQVACGGG--HTVVLTEKVVYAFGLGQFGQ 273
Query: 151 LGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKA 210
LGLG + E P +E + +KI +S G H TE G L+ +G DGR G LG
Sbjct: 274 LGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG---DGRHGKLGLG 330
Query: 211 LES 213
+E+
Sbjct: 331 MEN 333
Score = 159 (61.0 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 46/139 (33%), Positives = 70/139 (50%)
Query: 69 VSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL--DQVNVCAAFA 126
+S G H+ VT N ++ +G NN QLG G S+A P ++ L ++V + A
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG---SKAAIIKPTCIKALKPEKVKLAACGR 96
Query: 127 SGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALA 186
+ + S D G ++ G + GQLGLG V + I ++S G + A
Sbjct: 97 NHTLVST--DTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAA 154
Query: 187 QTEDGKLFGWGYSADGRIG 205
TEDGKLF WG +++G+IG
Sbjct: 155 LTEDGKLFMWGDNSEGQIG 173
Score = 140 (54.3 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 42/156 (26%), Positives = 71/156 (45%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGR 90
+FG+ G LGLP L + P RV G+P V V+ G H++ +T V+A+G
Sbjct: 213 TFGEPENGKLGLPNELLM---NHRSPQRVLGIPERVIQVACGGGHTVVLTEK-VVYAFGL 268
Query: 91 NNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQ 150
QLG G + +PK +E + +C ++ + + G L+ +G + G+
Sbjct: 269 GQFGQLGLGTFLFETS--EPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGK 326
Query: 151 LGLG-KDITEAIVPSRVEALAGEKIVKVSFGWGHAL 185
LGLG ++ T P+ + ++ G H L
Sbjct: 327 LGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHML 362
Score = 65 (27.9 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 257 EPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH 313
EP ++E ++ + I+CG +H+ ++ G+L + G +G+LG +GM F
Sbjct: 285 EPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLG-----LGMENFTNQFF 339
Query: 314 PVSISSGL 321
P S+ L
Sbjct: 340 PTLCSNFL 347
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 235 (87.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 63/196 (32%), Positives = 99/196 (50%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG--LPSDVTSVSAGHYHSLAVT 80
S V ++G LG T+ G+ P +V L V V+ G +HS+A+
Sbjct: 90 STEDGVVYAWGHNGYSQLGNGTTNQGIA-----PVQVCTNLLIKQVVEVACGSHHSMALA 144
Query: 81 NNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AIGDDGS 139
+G V+AWG NN Q+G G+ ++ T P++V + A G SS A+ D+G
Sbjct: 145 ADGEVFAWGYNNCGQVGSGSTANQPT---PRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
++ WG + GQLGLG + + + P RV AL + ++ G+ H LA T++G L+ WG +
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQ-LTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 200 ADGRIGNLGKALESSP 215
G++G K SP
Sbjct: 261 TYGQLGTGNKNNLLSP 276
Score = 177 (67.4 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 59/197 (29%), Positives = 91/197 (46%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSL---TGVGGDAYEPTRVPGL-PSDVTSVSAGHY 74
+F SAS V+ D GL S TG P ++ GL + S+S G
Sbjct: 26 VFGTSASEALYVTDND-EVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSG 84
Query: 75 -HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRV-EGLDQVNVCAAFASGVVSS 132
H L T +G V+AWG N QLG G P +V L V S
Sbjct: 85 PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIA---PVQVCTNLLIKQVVEVACGSHHSM 141
Query: 133 AIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGWGHALAQTEDG 191
A+ DG ++ WG + GQ+G G + P +V L +++V ++ G ++A ++G
Sbjct: 142 ALAADGEVFAWGYNNCGQVGSGSTANQP-TPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 192 KLFGWGYSADGRIGNLG 208
+++GWGY+ +G++G LG
Sbjct: 201 EVYGWGYNGNGQLG-LG 216
Score = 167 (63.8 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 45/142 (31%), Positives = 77/142 (54%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA-AFASGVVSSAI 134
+L VT+N V+ +G N LG G +S PK++EGL + + ++ SG
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLV---PKKLEGLCGKKIKSLSYGSGPHVLLS 90
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGWGHALAQTEDGKL 193
+DG ++ WG + QLG G + I P +V L +++V+V+ G H++A DG++
Sbjct: 91 TEDGVVYAWGHNGYSQLGNGTT-NQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEV 149
Query: 194 FGWGYSADGRIGNLGKALESSP 215
F WGY+ G++G+ A + +P
Sbjct: 150 FAWGYNNCGQVGSGSTANQPTP 171
Score = 163 (62.4 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 55/193 (28%), Positives = 89/193 (46%)
Query: 13 NVLTSRIF-MRSASGTAVVSFGDGSQGALGLPT-SLTGVGGDAYEPT--RVPGLP--SDV 66
N+L ++ + S ++ DG A G G G A +PT +V V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183
Query: 67 TSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFA 126
++ G S+AV +NG V+ WG N QLG G ++ T P RV L V V
Sbjct: 184 VGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT---PVRVAALHSVCVNQIVC 240
Query: 127 SGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG-H-A 184
+ A+ D+G L+ WG + GQLG G + P+ + + E++V+++ H +
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGNK-NNLLSPAHI-MVEKERVVEIAACHSAHTS 298
Query: 185 LAQTEDGKLFGWG 197
A+T+ G ++ WG
Sbjct: 299 AAKTQGGHVYMWG 311
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 41/124 (33%), Positives = 60/124 (48%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V +G G LGL G G+ P RV L S V + G+ H+LA+T+ G ++A
Sbjct: 202 VYGWGYNGNGQLGL-----GNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVE-GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG N QLG G ++ P + ++V AA S S+A G +++WG+
Sbjct: 257 WGANTYGQLGTG---NKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQC 313
Query: 147 KRGQ 150
RGQ
Sbjct: 314 -RGQ 316
Score = 88 (36.0 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
+ V V I CG+ H+L L G+L + G+N YGQLG ++ + P I
Sbjct: 230 LHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHI 279
Score = 87 (35.7 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 31/101 (30%), Positives = 46/101 (45%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN-FHPVSISS---GL 321
VV IACG S+ + NG + G N GQLG + PV + H V ++ G
Sbjct: 183 VVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGY 242
Query: 322 GHSLAICEVRSSNVTGGARGIV-SWGWNRSSQLGRMGPDNV 361
H+LA+ + G++ +WG N QLG +N+
Sbjct: 243 AHTLALTD----------EGLLYAWGANTYGQLGTGNKNNL 273
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 235 (87.8 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 63/196 (32%), Positives = 100/196 (51%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG--LPSDVTSVSAGHYHSLAVT 80
S V ++G LG T+ G+ P +V L V V+ G +HS+A+
Sbjct: 119 STEDGVVYAWGHNGYSQLGNGTTNQGIA-----PIQVCTNLLIKQVVEVACGSHHSMALA 173
Query: 81 NNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AIGDDGS 139
+G V+AWG NN Q+G G+ ++ T P++V + + A G SS A+ D+G
Sbjct: 174 ADGEVFAWGYNNCGQVGSGSTANQPT---PRKVTNCLHIKRVVSIACGQTSSMAVLDNGE 230
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
++ WG + GQLGLG + + + P RV AL + ++ G+ H LA T++G L+ WG +
Sbjct: 231 VYGWGYNGNGQLGLGNNGNQ-LTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 289
Query: 200 ADGRIGNLGKALESSP 215
G++G K SP
Sbjct: 290 TYGQLGTGNKNNLLSP 305
Score = 171 (65.3 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 49/166 (29%), Positives = 79/166 (47%)
Query: 47 TGVGGDAYEPTRVPGL-PSDVTSVSAGHY-HSLAVTNNGAVWAWGRNNEVQLGRGALESR 104
TG P ++ L + S+S G H L T +G V+AWG N QLG G
Sbjct: 85 TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQG 144
Query: 105 ATWNDPKRV-EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVP 163
P +V L V S A+ DG ++ WG + GQ+G G + P
Sbjct: 145 IA---PIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQP-TP 200
Query: 164 SRV-EALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
+V L +++V ++ G ++A ++G+++GWGY+ +G++G LG
Sbjct: 201 RKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLG-LG 245
Score = 167 (63.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 56/193 (29%), Positives = 90/193 (46%)
Query: 13 NVLTSRIF-MRSASGTAVVSFGDGSQGALGLPT-SLTGVGGDAYEPT--RVPGLP--SDV 66
N+L ++ + S ++ DG A G G G A +PT +V V
Sbjct: 153 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 212
Query: 67 TSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFA 126
S++ G S+AV +NG V+ WG N QLG G ++ T P RV L V V
Sbjct: 213 VSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT---PVRVAALHSVCVNQIVC 269
Query: 127 SGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG-H-A 184
+ A+ D+G L+ WG + GQLG G + P+ + + E++V+++ H +
Sbjct: 270 GYAHTLALTDEGLLYAWGANTYGQLGTGNK-NNLLSPAHI-MVEKERVVEIAACHSAHTS 327
Query: 185 LAQTEDGKLFGWG 197
A+T+ G ++ WG
Sbjct: 328 AAKTQGGHVYMWG 340
Score = 161 (61.7 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 44/142 (30%), Positives = 76/142 (53%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA-AFASGVVSSAI 134
+L VT+N V+ +G N LG G +S PK++E L + + ++ SG
Sbjct: 63 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLV---PKKLEALCGKKIKSLSYGSGPHVLLS 119
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGWGHALAQTEDGKL 193
+DG ++ WG + QLG G + I P +V L +++V+V+ G H++A DG++
Sbjct: 120 TEDGVVYAWGHNGYSQLGNGTT-NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEV 178
Query: 194 FGWGYSADGRIGNLGKALESSP 215
F WGY+ G++G+ A + +P
Sbjct: 179 FAWGYNNCGQVGSGSTANQPTP 200
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 41/124 (33%), Positives = 60/124 (48%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V +G G LGL G G+ P RV L S V + G+ H+LA+T+ G ++A
Sbjct: 231 VYGWGYNGNGQLGL-----GNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 285
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVE-GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG N QLG G ++ P + ++V AA S S+A G +++WG+
Sbjct: 286 WGANTYGQLGTG---NKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQC 342
Query: 147 KRGQ 150
RGQ
Sbjct: 343 -RGQ 345
Score = 88 (36.0 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
+ V V I CG+ H+L L G+L + G+N YGQLG ++ + P I
Sbjct: 259 LHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHI 308
Score = 88 (36.0 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 31/101 (30%), Positives = 46/101 (45%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN-FHPVSISS---GL 321
VV IACG S+ + NG + G N GQLG + PV + H V ++ G
Sbjct: 212 VVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGY 271
Query: 322 GHSLAICEVRSSNVTGGARGIV-SWGWNRSSQLGRMGPDNV 361
H+LA+ + G++ +WG N QLG +N+
Sbjct: 272 AHTLALTD----------EGLLYAWGANTYGQLGTGNKNNL 302
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 199 (75.1 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 57/184 (30%), Positives = 91/184 (49%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAY-EPTRVPGLPSD-VTSVSAGHYHSLAVTN 81
ASG + +G S G LGL G+ + P+++P P V V+ GH H+L +T
Sbjct: 2 ASGKELYCWGSTSHGQLGLG----GIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTA 57
Query: 82 NGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLW 141
G V+A G N+ QLG L ++ P+ ++ + +C S A+ D G +
Sbjct: 58 TGKVYACGSNDYSQLGHD-LPTKRPLLIPE-LQDYVIIQICCGSRH---SLALSDWGQVL 112
Query: 142 VWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD 201
WG + GQLG D +P V L + +V+++ G H+LA T G+L+ WG +
Sbjct: 113 SWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIY 172
Query: 202 GRIG 205
G++G
Sbjct: 173 GQLG 176
Score = 179 (68.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 82/326 (25%), Positives = 126/326 (38%)
Query: 56 PTRVPGLPSDVT-SVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P +P L V + G HSLA+++ G V +WG N+ QLG + PK V
Sbjct: 81 PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHAT--DKEIVQLPKVVR 138
Query: 115 GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGK--DITEAIVPSRVEALAGE 172
L V S A+ G L+ WG + GQLG+ D+T P R+ L G
Sbjct: 139 QLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI 198
Query: 173 KIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLD--------------S 218
+ ++ G H+ ++ G +FGWG + G++G + S P
Sbjct: 199 PLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACG 258
Query: 219 NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMP-IIWEPFLVEGVEVVDIACGFDHSL 277
+ A + G + +P ++ E + G + +ACG H+L
Sbjct: 259 DEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVME---LMGSTITQVACGNRHTL 315
Query: 278 VL-GRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVT 336
L G + + G GQLG M P + P SG A+ + S V+
Sbjct: 316 ALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP-QVVIGPWVSPSGS----ALLQSNDSQVS 370
Query: 337 GGARGIVSWGWNRSSQLGRMGPDNVP 362
R I S G ++S + D VP
Sbjct: 371 LVIRQIFSGG-DQSIVTTTLFVDKVP 395
Score = 171 (65.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 55/179 (30%), Positives = 88/179 (49%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V+S+GD G LG T V P V L + V ++ G+ HSLA+T+ G +++
Sbjct: 111 VLSWGDNDCGQLGHATDKEIV----QLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYS 166
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG N QLG + N P R+ L + + A G S I G+++ WG++
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 226
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
GQLGL D T P++++ L + V+ G ++ T +G +F G A G++G+
Sbjct: 227 CGQLGLN-DETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284
Score = 89 (36.4 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 29/112 (25%), Positives = 48/112 (42%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLG 322
G+ + IACG +HS ++ ++G + G N GQLG + +P + ++ + LG
Sbjct: 197 GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLK----TLRT-LG 251
Query: 323 HSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--VPLVVEGLEGES 372
C S G+ + G QLG N +P +V L G +
Sbjct: 252 VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGST 303
Score = 85 (35.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 30/128 (23%), Positives = 52/128 (40%)
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
++ WG + QLG G +E P ++ V + + G ++ G
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILT-PSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
+ QLG D+ P + L I+++ G H+LA ++ G++ WG D
Sbjct: 66 SNDYSQLG--HDLPTKR-PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG---DNDC 119
Query: 205 GNLGKALE 212
G LG A +
Sbjct: 120 GQLGHATD 127
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 227 (85.0 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 73/194 (37%), Positives = 98/194 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTG-VGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWA 87
V+S G S G LG+P V A E R V S++AG H+LA T +G V+
Sbjct: 122 VLSCGSNSFGQLGVPHGPRRCVVPQAIEVQR-----EKVVSIAAGLRHALAATASGLVFQ 176
Query: 88 WGR---NNEVQLGRG-ALESRATWNDPKRVE-GLDQVN-VCAAFASGVVSSAIGDDGSLW 141
WG ++ +L G L T +P +V GL+ VC SG S+++ D G L+
Sbjct: 177 WGTGLASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGH-SASLTDAGELY 235
Query: 142 VWGKSKRGQLGLGKDITEAIVPSRVEA--LAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
VWG +K GQL +P ++EA EK+ V GW H +AQTE GK+F WG
Sbjct: 236 VWGSNKHGQLA--SQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWG-R 292
Query: 200 ADGRIGNLGKALES 213
AD G LG+ LES
Sbjct: 293 AD--YGQLGRTLES 304
Score = 164 (62.8 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 53/181 (29%), Positives = 84/181 (46%)
Query: 27 TAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGL--PSDVTSVSAGHYHSLAVTNNGA 84
TA+ ++G S G LGL G D P ++ P V ++ G HS VT+ G+
Sbjct: 15 TALFAWGANSYGQLGL-----GHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGS 69
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
++ G N + QLG G E + K + G V + ++ + +G + G
Sbjct: 70 LFVCGLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTII---LTKNGQVLSCG 126
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG--YSADG 202
+ GQLG+ +VP +E + EK+V ++ G HALA T G +F WG ++ G
Sbjct: 127 SNSFGQLGVPHGPRRCVVPQAIE-VQREKVVSIAAGLRHALAATASGLVFQWGTGLASSG 185
Query: 203 R 203
R
Sbjct: 186 R 186
Score = 135 (52.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 41/124 (33%), Positives = 66/124 (53%)
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI-GDDGSLWV 142
A++AWG N+ QLG G E P+++ + G SAI D GSL+V
Sbjct: 16 ALFAWGANSYGQLGLGHKEDVLL---PQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFV 72
Query: 143 WGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD 201
G +K GQLGLG TE ++ + ++L G I +V+ GW + T++G++ G ++
Sbjct: 73 CGLNKDGQLGLGH--TEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSF 130
Query: 202 GRIG 205
G++G
Sbjct: 131 GQLG 134
Score = 124 (48.7 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 39/113 (34%), Positives = 57/113 (50%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMG-MFPVDINFHP---VSIS 318
G + +ACG+D +++L +NG +LSCGSN +GQLG + P I VSI+
Sbjct: 100 GCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQLGVPHGPRRCVVPQAIEVQREKVVSIA 159
Query: 319 SGLGHSLAICEVRSSNVTGGARGIV-SWGWNRSSQLGRMGP-DNVPLVVEGLE 369
+GL H+LA A G+V WG +S R+ P +PL + E
Sbjct: 160 AGLRHALAAT----------ASGLVFQWGTGLASSGRRLCPGQTLPLFLTAKE 202
Score = 116 (45.9 bits), Expect = 0.00040, P = 0.00040
Identities = 43/145 (29%), Positives = 65/145 (44%)
Query: 26 GTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVP-GLP-SDVTSVSAGHYHSLAVTNNG 83
GT + S G LP LT A EP++V GL S V AG HS ++T+ G
Sbjct: 178 GTGLASSGRRLCPGQTLPLFLT-----AKEPSKVTVGLENSQAVCVLAGSGHSASLTDAG 232
Query: 84 AVWAWGRNNEVQLGRGALESRATWND-PKRVEG--LDQVNVCAAFASGVVSSAIGDDGSL 140
++ WG N G L S+A + P+++E V A ++ A + G +
Sbjct: 233 ELYVWGSNKH-----GQLASQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKV 287
Query: 141 WVWGKSKRGQLGLGKDITEAIVPSR 165
+ WG++ GQLG + E P +
Sbjct: 288 FTWGRADYGQLGRTLESPEGWKPKK 312
Score = 108 (43.1 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 139 SLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVK-VSFGWGHALAQTEDGKLFGWG 197
+L+ WG + GQLGLG + ++P ++ VK ++ G GH+ T+ G LF G
Sbjct: 16 ALFAWGANSYGQLGLGHK-EDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCG 74
Query: 198 YSADGRIGNLG 208
+ DG++G LG
Sbjct: 75 LNKDGQLG-LG 84
Score = 81 (33.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 26/97 (26%), Positives = 44/97 (45%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF-HPVSISS 319
V+ +VV IA G H+L +G++ G+ + GR P+ + P ++
Sbjct: 150 VQREKVVSIAAGLRHALAATASGLVFQWGTGLASS-GRRLCPGQTLPLFLTAKEPSKVTV 208
Query: 320 GLGHSLAICEVRSSNVTGG---ARGIVSWGWNRSSQL 353
GL +S A+C + S + A + WG N+ QL
Sbjct: 209 GLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQL 245
Score = 62 (26.9 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 30/101 (29%), Positives = 42/101 (41%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHP------ 314
+E + V + G HS L G L GSN +GQL + + + P I H
Sbjct: 210 LENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLASQAAFLPL-PQKIEAHRFQNEKV 268
Query: 315 VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGR 355
++ SG H +A E TG + +WG QLGR
Sbjct: 269 AAVWSGWTHLVAQTE------TGK---VFTWGRADYGQLGR 300
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 234 (87.4 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 63/196 (32%), Positives = 99/196 (50%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG--LPSDVTSVSAGHYHSLAVT 80
S V ++G LG T+ G+ P +V L V V+ G +HS+A+
Sbjct: 90 STEDGVVYAWGHNGYSQLGNGTTNQGIA-----PIQVCTNLLIKQVVEVACGSHHSMALA 144
Query: 81 NNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AIGDDGS 139
+G V+AWG NN Q+G G+ ++ T P++V + A G SS A+ D+G
Sbjct: 145 ADGEVFAWGYNNCGQVGSGSTTNQPT---PRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
++ WG + GQLGLG + + + P RV AL + ++ G+ H LA T++G L+ WG +
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQ-LTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 200 ADGRIGNLGKALESSP 215
G++G K SP
Sbjct: 261 TYGQLGTGNKNNLLSP 276
Score = 170 (64.9 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 50/166 (30%), Positives = 79/166 (47%)
Query: 47 TGVGGDAYEPTRVPGL-PSDVTSVSAGHY-HSLAVTNNGAVWAWGRNNEVQLGRGALESR 104
TG P ++ L + S+S G H L T +G V+AWG N QLG G
Sbjct: 56 TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQG 115
Query: 105 ATWNDPKRV-EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVP 163
P +V L V S A+ DG ++ WG + GQ+G G T P
Sbjct: 116 IA---PIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGST-TNQPTP 171
Query: 164 SRV-EALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
+V L +++V ++ G ++A ++G+++GWGY+ +G++G LG
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG-LG 216
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 42/134 (31%), Positives = 68/134 (50%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V ++ G S+AV +NG V+ WG N QLG G ++ T P RV L V V
Sbjct: 183 VVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT---PVRVAALHSVCVNQIV 239
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG-H- 183
+ A+ D+G L+ WG + GQLG G + P+ + + E++V+++ H
Sbjct: 240 CGYAHTLALTDEGLLYAWGANTYGQLGTGNK-NNLLSPAHI-MVEKERVVEIAACHSAHT 297
Query: 184 ALAQTEDGKLFGWG 197
+ A+T+ G ++ WG
Sbjct: 298 SAAKTQGGHVYMWG 311
Score = 157 (60.3 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 43/142 (30%), Positives = 75/142 (52%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA-AFASGVVSSAI 134
+L VT+N V+ +G N LG G +S PK++E L + + ++ SG
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLV---PKKLEALCGKKIKSLSYGSGPHVLLS 90
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGWGHALAQTEDGKL 193
+DG ++ WG + QLG G + I P +V L +++V+V+ G H++A DG++
Sbjct: 91 TEDGVVYAWGHNGYSQLGNGTT-NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEV 149
Query: 194 FGWGYSADGRIGNLGKALESSP 215
F WGY+ G++G+ + +P
Sbjct: 150 FAWGYNNCGQVGSGSTTNQPTP 171
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 41/124 (33%), Positives = 60/124 (48%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V +G G LGL G G+ P RV L S V + G+ H+LA+T+ G ++A
Sbjct: 202 VYGWGYNGNGQLGL-----GNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVE-GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG N QLG G ++ P + ++V AA S S+A G +++WG+
Sbjct: 257 WGANTYGQLGTG---NKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQC 313
Query: 147 KRGQ 150
RGQ
Sbjct: 314 -RGQ 316
Score = 88 (36.0 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
+ V V I CG+ H+L L G+L + G+N YGQLG ++ + P I
Sbjct: 230 LHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHI 279
Score = 87 (35.7 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 31/101 (30%), Positives = 46/101 (45%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN-FHPVSISS---GL 321
VV IACG S+ + NG + G N GQLG + PV + H V ++ G
Sbjct: 183 VVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGY 242
Query: 322 GHSLAICEVRSSNVTGGARGIV-SWGWNRSSQLGRMGPDNV 361
H+LA+ + G++ +WG N QLG +N+
Sbjct: 243 AHTLALTD----------EGLLYAWGANTYGQLGTGNKNNL 273
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 225 (84.3 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 65/204 (31%), Positives = 103/204 (50%)
Query: 4 LKSVVHNHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP 63
LKS + H++ S + G V FGD ++G LGL + G +P V L
Sbjct: 31 LKSDIPVHISCGQSHSAFVTEQGRLFV-FGDNNRGQLGLQ-----IKGPVTKPVCVKVLK 84
Query: 64 SD-VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL-DQVNV 121
+ SV+ G H+L T+ G + A G N++ QLG G ++ +R+ D +
Sbjct: 85 GERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISF---QRLRPFCDYAPI 141
Query: 122 CAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGW 181
A S+A+ +DG L++WG + GQLG G D + A++P + G+ I VS G+
Sbjct: 142 KLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGND-SHALLPKELNM--GQSIHWVSCGY 198
Query: 182 GHALAQTEDGKLFGWGYSADGRIG 205
H+ T+ G ++ +G SADGR+G
Sbjct: 199 RHSALVTDSGDVYSFGESADGRLG 222
Score = 167 (63.8 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 58/182 (31%), Positives = 88/182 (48%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRN 91
+GD S G LG G A P + + + VS G+ HS VT++G V+++G +
Sbjct: 163 WGDNSAGQLGF-----GNDSHALLPKEL-NMGQSIHWVSCGYRHSALVTDSGDVYSFGES 216
Query: 92 NEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQL 151
+ +LG A A + P+RVE L V A G + A+ +D L+ +G + GQL
Sbjct: 217 ADGRLGLSA-HQLANHSYPQRVESLHSVLQVAC--GGKHTLALTED-ELYCFGGGEFGQL 272
Query: 152 GLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKAL 211
GLG + A P V ++ V+ G H+ T+ G L+ +G DGR G LG
Sbjct: 273 GLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALITDSGLLYTFG---DGRHGKLGHGD 329
Query: 212 ES 213
E+
Sbjct: 330 EN 331
Score = 159 (61.0 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 83/321 (25%), Positives = 133/321 (41%)
Query: 56 PTRVPGLPSDV-TSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P+R+ L SD+ +S G HS VT G ++ +G NN QLG L+ + P V+
Sbjct: 26 PSRL-WLKSDIPVHISCGQSHSAFVTEQGRLFVFGDNNRGQLG---LQIKGPVTKPVCVK 81
Query: 115 GLDQVNVCAAFASGVVSSAIG-DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEK 173
L + A G + + G + G + GQLGLG ++I R+
Sbjct: 82 VLKGERA-QSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGH-CNDSISFQRLRPFCDYA 139
Query: 174 IVKVSFGWGH-ALAQTEDGKLFGWGYSADGRIG--NLGKALESSPLDSNXXXXXXXXXXX 230
+K+ H + A TEDG+LF WG ++ G++G N AL L+
Sbjct: 140 PIKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHWVSCGYR 199
Query: 231 XXXXXXKAQKLVSEGMEKEKYMPIIWE-------PFLVEGVE-VVDIACGFDHSLVLGRN 282
+ + S G + + + P VE + V+ +ACG H+L L +
Sbjct: 200 HSALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHSVLQVACGGKHTLALTED 259
Query: 283 GVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSIS---SGLGHSLAICEVRSSNVTGGA 339
L G +GQLG +G V + PV++ G + E S+ +T
Sbjct: 260 E-LYCFGGGEFGQLG-----LGTL-VFVADSPVAVGHFRKGRVTHVTCGEQHSALITDSG 312
Query: 340 RGIVSWGWNRSSQLGRMGPDN 360
+ ++G R +LG G +N
Sbjct: 313 L-LYTFGDGRHGKLGH-GDEN 331
Score = 133 (51.9 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 48/158 (30%), Positives = 73/158 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V SFG+ + G LGL S + +Y P RV L S V V+ G H+LA+T + ++ +
Sbjct: 210 VYSFGESADGRLGL--SAHQLANHSY-PQRVESLHS-VLQVACGGKHTLALTED-ELYCF 264
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKR 148
G QLG G L A + P V + V S+ I D G L+ +G +
Sbjct: 265 GGGEFGQLGLGTLVFVA--DSPVAVGHFRKGRVTHVTCGEQHSALITDSGLLYTFGDGRH 322
Query: 149 GQLGLG-KDITEAIVPSRVEALAGEKIVKVSFGWGHAL 185
G+LG G ++ T P+ + ++ V+ G H L
Sbjct: 323 GKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSHML 360
Score = 62 (26.9 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 16/72 (22%), Positives = 32/72 (44%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDM-GMFPVDI-----NFHPVSISS 319
V + CG HS ++ +G+L + G +G+LG ++ F + + ++++
Sbjct: 295 VTHVTCGEQHSALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVAC 354
Query: 320 GLGHSLAICEVR 331
G H L R
Sbjct: 355 GSSHMLVFARPR 366
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 238 (88.8 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 90/299 (30%), Positives = 134/299 (44%)
Query: 20 FMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTS---VSAGHY-H 75
F+ A+GT V++ G+GS G LG G D + T + L V + S G H
Sbjct: 4041 FVIQANGT-VLACGEGSYGRLG-----QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4094
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
S+A+T +G V++WG + +LG G + + P+++E L V S+ +
Sbjct: 4095 SMALTESGEVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 4151
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
DG L+ +G G+LGLG + + P RV AL G +I +V+ G H LA + DG +
Sbjct: 4152 SDGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMV- 4209
Query: 196 WGYSADGRIGNLG---KALESSP--LD--SNXXXXXXXXXXXXXXXXXK--------AQK 240
W + DG G LG +SSP +D K +
Sbjct: 4210 WAFG-DGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4268
Query: 241 LVS--EGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
L+ EG + P P L GV + D+A G +H+L L G + + GSN GQLG
Sbjct: 4269 LIGLPEGRARNHNRPQ-QIPVLA-GVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLG 4325
Score = 199 (75.1 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 60/192 (31%), Positives = 97/192 (50%)
Query: 20 FMRSASGTAVVSFGDGSQGALGLPTS--LTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSL 77
F+ S G+ V + G GS G LGL S + + +EP R V+S H+L
Sbjct: 416 FVISTDGS-VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI---KKVSSSKGSDGHTL 471
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVV-SSAIGD 136
A T G V++WG + +LG G + +T PK ++G Q V ++G S+A+ +
Sbjct: 472 AFTTEGEVFSWGDGDYGKLGHG---NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 137 DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGW 196
DG L+ WG+ G+LG G D +P+ V+ ++ + +VS G H +A ++DG+ W
Sbjct: 529 DGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTV-W 584
Query: 197 GYSADGRIGNLG 208
+ +G LG
Sbjct: 585 SFGGGDNVGKLG 596
Score = 198 (74.8 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 64/176 (36%), Positives = 86/176 (48%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG-LPSDVT-SVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG S T Y P + G L V VSAG+ HS AVT +G ++
Sbjct: 479 VFSWGDGDYGKLGHGNSST----QKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG-SLWVWGK 145
WG + +LG G SR N P V+ + V + +S + A+ DG ++W +G
Sbjct: 534 TWGEGDFGRLGHGDSNSR---NIPTLVKDISNVGEVSCGSSHTI--ALSKDGRTVWSFGG 588
Query: 146 SKR-GQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
G+LG G D P VEAL G I KV G +LA T G+++ WG A
Sbjct: 589 GDNVGKLGHG-DTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 643
Score = 188 (71.2 bits), Expect = 6.9e-16, Sum P(2) = 6.9e-16
Identities = 60/209 (28%), Positives = 99/209 (47%)
Query: 2 RLLKSVVHNHVNVLTSRIFMRSASGTA---VVSFGDGSQGALGLPTSLTGVGGDAYEPTR 58
+L++ + V V S + SA+ T + ++G+G G LG G PT
Sbjct: 502 KLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-----HGDSNSRNIPTL 556
Query: 59 VPGLPSDVTSVSAGHYHSLAVTNNG-AVWAWGRNNEV-QLGRGALESRATWNDPKRVEGL 116
V + S+V VS G H++A++ +G VW++G + V +LG G ++ + PK VE L
Sbjct: 557 VKDI-SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHG--DTNRVYK-PKVVEAL 612
Query: 117 DQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVK 176
+ + A S A+ G ++ WG LG G A+ P +E LA +IV
Sbjct: 613 QGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVD 670
Query: 177 VSFGWGHALAQTEDGKLFGWGYSADGRIG 205
+S G H D +++ WG ++ G+ G
Sbjct: 671 ISIGDSHVWLFVMDNEVYAWGNNSMGQCG 699
Score = 176 (67.0 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 51/171 (29%), Positives = 78/171 (45%)
Query: 38 GALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLG 97
GA G L G + P P S V G + + NG V A G + +LG
Sbjct: 4004 GA-GRHGQLAEAGRNVMVPAAAPSF-SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLG 4061
Query: 98 RGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDI 157
+G + ++G + + S S A+ + G ++ WG G+LG G
Sbjct: 4062 QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSD 4121
Query: 158 TEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
+ P ++EAL GE++V++S G+ H+ T DGKLF +G GR+G LG
Sbjct: 4122 RQRR-PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLG-LG 4170
Score = 173 (66.0 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 57/194 (29%), Positives = 97/194 (50%)
Query: 20 FMRSASGTA---VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYH 75
F SA T+ + +FG+G G LGL G + P RV L + V+ G H
Sbjct: 4144 FKHSAVVTSDGKLFTFGNGDYGRLGL-----GNTSNKKLPERVTALEGYQIGQVACGLNH 4198
Query: 76 SLAVTNNGA-VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
+LAV+ +G+ VWA+G + +LG G ++++ P++V+ L + + S A+
Sbjct: 4199 TLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS---PQKVDVLCGIGIKKVACGTQFSVAL 4255
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
DG ++ +G+ + L G+ P ++ LAG I V+ G H LA G ++
Sbjct: 4256 TKDGHVYTFGQDRLIGLPEGRARNHNR-PQQIPVLAGVVIEDVAVGAEHTLALASTGDVY 4314
Query: 195 GWGYSADGRIGNLG 208
WG +++G++G LG
Sbjct: 4315 AWGSNSEGQLG-LG 4327
Score = 171 (65.3 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 43/144 (29%), Positives = 74/144 (51%)
Query: 64 SDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA 123
SD ++ AG Y + ++ +G+V A G+ + +LG G +++T V +
Sbjct: 403 SDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSS 462
Query: 124 AFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA-LAGEKIVKVSFGWG 182
+ S + A +G ++ WG G+LG G T+ P ++ L G+ +V VS G+
Sbjct: 463 SKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYR 521
Query: 183 HALAQTEDGKLFGWGYSADGRIGN 206
H+ A TEDG+L+ WG GR+G+
Sbjct: 522 HSAAVTEDGELYTWGEGDFGRLGH 545
Score = 166 (63.5 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 66/208 (31%), Positives = 90/208 (43%)
Query: 3 LLKSVVH-NHVNVLTSRIFMRSASGTAVVSFGDGSQ-GALGLPTSLTGVGGDAYEPTRVP 60
L+K + + V+ +S S G V SFG G G LG G Y+P V
Sbjct: 556 LVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNVGKLG-----HGDTNRVYKPKVVE 610
Query: 61 GLPSD-VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQV 119
L + V AG SLA+T+ G V+AWG LG G+ S AT PK +E L
Sbjct: 611 ALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGS--SEATALRPKLIEELA-- 664
Query: 120 NVCAAFASGVVSSAIGD--------DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAG 171
A+ +V +IGD D ++ WG + GQ G G P +V L G
Sbjct: 665 ------ATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDG 718
Query: 172 EKIVKVSFGWGHALAQT---EDGKLFGW 196
I ++S G H+LA T D ++ W
Sbjct: 719 IAIQQISAGTSHSLAWTALPRDRQVVAW 746
Score = 122 (48.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 43/138 (31%), Positives = 56/138 (40%)
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG 138
V+ V+ WG N+ QL G E PK A + I DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKIL---QPKMALSFSDAQTIEA--GQYCTFVISTDG 422
Query: 139 SLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGW-GHALAQTEDGKLFGW 196
S+ GK G+LGLG ++ + E K V S G GH LA T +G++F W
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 197 GYSADGRIGNLGKALESS 214
G DG G LG S+
Sbjct: 483 G---DGDYGKLGHGNSST 497
Score = 102 (41.0 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN----FHPVS 316
++G EVV ++CGF HS V+ +G L + G+ YG+LG P + +
Sbjct: 4132 LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQ 4191
Query: 317 ISSGLGHSLAI 327
++ GL H+LA+
Sbjct: 4192 VACGLNHTLAV 4202
Score = 93 (37.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 35/139 (25%), Positives = 61/139 (43%)
Query: 240 KLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
KL +KY +I P ++G VV ++ G+ HS + +G L + G +G+LG
Sbjct: 489 KLGHGNSSTQKYPKLIQGP--LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 300 KQDMGMFPV---DINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM 356
+ P DI+ + +S G H++A+ + G W + +G++
Sbjct: 547 DSNSRNIPTLVKDIS-NVGEVSCGSSHTIALSK----------DGRTVWSFGGGDNVGKL 595
Query: 357 GPDNV-----PLVVEGLEG 370
G + P VVE L+G
Sbjct: 596 GHGDTNRVYKPKVVEALQG 614
Score = 91 (37.1 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 33/112 (29%), Positives = 50/112 (44%)
Query: 269 IACGFDHSLVLGRNGVLLSCGSNVYGQLGR-EKQDMGMFPVDINFHPVSI-----SSGL- 321
+ CG + + V+ NG +L+CG YG+LG+ D+ + V + S G
Sbjct: 4033 VICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSD 4092
Query: 322 GHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEGE 371
GHS+A+ E G + SWG +LG D P +E L+GE
Sbjct: 4093 GHSMALTE-------SGE--VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGE 4135
Score = 69 (29.3 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 30/116 (25%), Positives = 53/116 (45%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSN-VYG-QLGREKQDMG--MFPVDINFHPVSIS 318
G+ + +ACG S+ L ++G + + G + + G GR + PV ++
Sbjct: 4239 GIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVA 4298
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEGES 372
G H+LA+ TG + +WG N QLG ++V P +V L+G++
Sbjct: 4299 VGAEHTLALAS------TGD---VYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4345
Score = 53 (23.7 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 258 PFLVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG---------REKQDMGM 305
P L+E +VDI+ G H + + + + G+N GQ G + K+ G+
Sbjct: 657 PKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL 716
Query: 306 FPVDINFHPVSISSGLGHSLA 326
+ I IS+G HSLA
Sbjct: 717 DGIAIQ----QISAGTSHSLA 733
Score = 39 (18.8 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 337 GGARGIVSWGWNRSSQLGRMG 357
GG + WG R QL G
Sbjct: 3995 GGKCDVYLWGAGRHGQLAEAG 4015
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 233 (87.1 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 63/196 (32%), Positives = 98/196 (50%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG--LPSDVTSVSAGHYHSLAVT 80
S V ++G LG T+ G+ P +V L V V+ G +HS+A+
Sbjct: 90 STEDGVVYAWGHNGYSQLGNGTTNQGIA-----PIQVCTNLLVKQVVEVACGSHHSMALA 144
Query: 81 NNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AIGDDGS 139
+G ++AWG NN Q+G G+ ++ T P++V A G SS A+ D G
Sbjct: 145 ADGELFAWGYNNCGQVGSGSTANQPT---PRKVTNCLHTKKVVNIACGQTSSMAVLDSGE 201
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
++ WG + GQLGLG + + + P RV AL G + ++ G+ H LA T++G L+ WG +
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQ-LTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 200 ADGRIGNLGKALESSP 215
G++G K SP
Sbjct: 261 TYGQLGTGSKNNLLSP 276
Score = 178 (67.7 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 51/166 (30%), Positives = 78/166 (46%)
Query: 47 TGVGGDAYEPTRVPGLPSD-VTSVSAGHY-HSLAVTNNGAVWAWGRNNEVQLGRGALESR 104
TG P ++ L + S+S G H L T +G V+AWG N QLG G
Sbjct: 56 TGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQG 115
Query: 105 ATWNDPKRV-EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVP 163
P +V L V S A+ DG L+ WG + GQ+G G + P
Sbjct: 116 IA---PIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQP-TP 171
Query: 164 SRV-EALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
+V L +K+V ++ G ++A + G+++GWGY+ +G++G LG
Sbjct: 172 RKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLG-LG 216
Score = 161 (61.7 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 53/193 (27%), Positives = 91/193 (47%)
Query: 13 NVLTSRIF-MRSASGTAVVSFGDGSQGALGLPT-SLTGVGGDAYEPT--RVPGL--PSDV 66
N+L ++ + S ++ DG A G G G A +PT +V V
Sbjct: 124 NLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKV 183
Query: 67 TSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFA 126
+++ G S+AV ++G V+ WG N QLG G ++ T P RV L V V
Sbjct: 184 VNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT---PVRVAALHGVCVNQIVC 240
Query: 127 SGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG-H-A 184
+ A+ D+G L+ WG + GQLG G + P+++ + E++++++ H +
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGSK-NNLLSPTQI-MVEKERVIEIAACHSTHTS 298
Query: 185 LAQTEDGKLFGWG 197
A+T+ G ++ WG
Sbjct: 299 AAKTQGGHVYMWG 311
Score = 160 (61.4 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 46/152 (30%), Positives = 80/152 (52%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA-A 124
V +SA ++ VT++ V+ +G N LG G +S PK++E L + + +
Sbjct: 26 VFGISASE--AIYVTDSDEVFVFGLNYSNCLGTGDNQSTLV---PKKLEALCGKRIKSLS 80
Query: 125 FASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGWGH 183
+ SG +DG ++ WG + QLG G + I P +V L +++V+V+ G H
Sbjct: 81 YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTT-NQGIAPIQVCTNLLVKQVVEVACGSHH 139
Query: 184 ALAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
++A DG+LF WGY+ G++G+ A + +P
Sbjct: 140 SMALAADGELFAWGYNNCGQVGSGSTANQPTP 171
Score = 126 (49.4 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 41/124 (33%), Positives = 60/124 (48%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V +G G LGL G G+ P RV L V + G+ H+LA+T+ G ++A
Sbjct: 202 VYGWGYNGNGQLGL-----GNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYA 256
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVE-GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG N QLG G S+ P ++ ++V AA S S+A G +++WG+
Sbjct: 257 WGANTYGQLGTG---SKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQC 313
Query: 147 KRGQ 150
RGQ
Sbjct: 314 -RGQ 316
Score = 95 (38.5 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
+ GV V I CG+ H+L L G+L + G+N YGQLG ++ + P I
Sbjct: 230 LHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI 279
Score = 84 (34.6 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 30/102 (29%), Positives = 48/102 (47%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN-FHPVSISS---G 320
+VV+IACG S+ + +G + G N GQLG + PV + H V ++ G
Sbjct: 182 KVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCG 241
Query: 321 LGHSLAICEVRSSNVTGGARGIV-SWGWNRSSQLGRMGPDNV 361
H+LA+ + G++ +WG N QLG +N+
Sbjct: 242 YAHTLALTD----------EGLLYAWGANTYGQLGTGSKNNL 273
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 237 (88.5 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 102/345 (29%), Positives = 159/345 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VTSVSAGHYHSLAVTNNGAVW 86
++ +G S G G+ +L G+ EP +V G SD V V+ G HS+ + +G V+
Sbjct: 1 MLCWGYWSLGQPGISPNLQGI---VAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVY 56
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
G N + QLG E N P+++ L ++ S A+ D G L+ WG
Sbjct: 57 TCGVNTKGQLGH---EREG--NKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAG 111
Query: 147 KRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
GQLGL I +++ VP ++ L + I++VS G H LA DG+ F WG ++ G++G
Sbjct: 112 SDGQLGL-MTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLG 170
Query: 206 NLGKALES--SPLDSNXXXXXXXXXXXXXXXXXKAQKLVSE----GM----------EKE 249
LGK S SP A L GM EK+
Sbjct: 171 -LGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 250 KYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP-- 307
+ P + L+ +VV I+CG +H+ VL ++G + + G+ GQLG + + + P
Sbjct: 230 RESPCHVK--LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRR 287
Query: 308 -VDINFHPVS-ISSGLGHSLAICEVRSSNVT---G-GARGIVSWG 346
+++ V+ I+ G H+LA V SS + G GARG + G
Sbjct: 288 VLELMGSEVTQIACGRQHTLAF--VPSSGLIYAFGCGARGQLGTG 330
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 49/225 (21%), Positives = 90/225 (40%)
Query: 143 WGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVK-VSFGWGHALAQTEDGKLFGWGYSAD 201
WG GQ G+ ++ + +V ++ VK V+ G H++ EDG+++ G +
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 202 GRIGNL---GKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPI---- 254
G++G+ K + L + Q L S G + + +
Sbjct: 64 GQLGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQ-LFSWGAGSDGQLGLMTIE 122
Query: 255 --IWEPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD 309
+ P L++ + ++ ++CG H L L +G + G N +GQLG K+ FP
Sbjct: 123 DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKE----FPSQ 178
Query: 310 INFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
+ V G+ + + S + + WG N + QLG
Sbjct: 179 ASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLG 223
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 232 (86.7 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 63/196 (32%), Positives = 99/196 (50%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG--LPSDVTSVSAGHYHSLAVT 80
S V ++G LG T+ G+ P +V L V V+ G +HS+A+
Sbjct: 90 STEDGVVYAWGHNGYSQLGNGTTNQGLA-----PIQVCTNLLIKQVVEVACGSHHSMALA 144
Query: 81 NNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AIGDDGS 139
+G V+AWG NN Q+G G+ ++ T P++V + A G SS A+ D+G
Sbjct: 145 ADGEVFAWGYNNCGQVGSGSTANQPT---PRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
++ WG + GQLGLG + + + P RV AL + ++ G+ H LA T++G L+ WG +
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQ-LTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 200 ADGRIGNLGKALESSP 215
G++G K SP
Sbjct: 261 TYGQLGTGNKNNLLSP 276
Score = 174 (66.3 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 58/207 (28%), Positives = 96/207 (46%)
Query: 9 HNHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLP-TSLTGVGGD--AYEPTRVPGL-PS 64
H ++ + +F SA+ V+ D GL +S G G + P ++ L
Sbjct: 16 HEIASIRKACVFGTSANEALYVTDSD-EVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGK 74
Query: 65 DVTSVSAGHY-HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRV-EGLDQVNVC 122
+ S+S G H L T +G V+AWG N QLG G P +V L V
Sbjct: 75 KIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLA---PIQVCTNLLIKQVV 131
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGW 181
S A+ DG ++ WG + GQ+G G + P +V L +++V ++ G
Sbjct: 132 EVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQP-TPRKVTNCLHIKRVVGIACGQ 190
Query: 182 GHALAQTEDGKLFGWGYSADGRIGNLG 208
++A ++G+++GWGY+ +G++G LG
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LG 216
Score = 162 (62.1 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 54/193 (27%), Positives = 89/193 (46%)
Query: 13 NVLTSRIF-MRSASGTAVVSFGDGSQGALGLPT-SLTGVGGDAYEPT--RVPGLP--SDV 66
N+L ++ + S ++ DG A G G G A +PT +V V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183
Query: 67 TSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFA 126
++ G S+AV +NG V+ WG N QLG G ++ T P RV L V V
Sbjct: 184 VGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT---PVRVAALHSVCVNQIVC 240
Query: 127 SGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG-H-A 184
+ A+ D+G L+ WG + GQLG G + P+ + + E++++++ H +
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGNK-NNLLSPAHI-MVEKERVIEIAACHSAHTS 298
Query: 185 LAQTEDGKLFGWG 197
A+T+ G ++ WG
Sbjct: 299 AAKTQGGHVYMWG 311
Score = 153 (58.9 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 42/142 (29%), Positives = 75/142 (52%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA-AFASGVVSSAI 134
+L VT++ V+ +G N LG G S PK++E L + + ++ SG
Sbjct: 34 ALYVTDSDEVFVFGLNYSSCLGTGDNHSTLV---PKKLEALCGKKIKSLSYGSGPHVLLS 90
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGWGHALAQTEDGKL 193
+DG ++ WG + QLG G + + P +V L +++V+V+ G H++A DG++
Sbjct: 91 TEDGVVYAWGHNGYSQLGNGTT-NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEV 149
Query: 194 FGWGYSADGRIGNLGKALESSP 215
F WGY+ G++G+ A + +P
Sbjct: 150 FAWGYNNCGQVGSGSTANQPTP 171
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 41/124 (33%), Positives = 60/124 (48%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V +G G LGL G G+ P RV L S V + G+ H+LA+T+ G ++A
Sbjct: 202 VYGWGYNGNGQLGL-----GNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVE-GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG N QLG G ++ P + ++V AA S S+A G +++WG+
Sbjct: 257 WGANTYGQLGTG---NKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQC 313
Query: 147 KRGQ 150
RGQ
Sbjct: 314 -RGQ 316
Score = 88 (36.0 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
+ V V I CG+ H+L L G+L + G+N YGQLG ++ + P I
Sbjct: 230 LHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHI 279
Score = 87 (35.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 31/101 (30%), Positives = 46/101 (45%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN-FHPVSISS---GL 321
VV IACG S+ + NG + G N GQLG + PV + H V ++ G
Sbjct: 183 VVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGY 242
Query: 322 GHSLAICEVRSSNVTGGARGIV-SWGWNRSSQLGRMGPDNV 361
H+LA+ + G++ +WG N QLG +N+
Sbjct: 243 AHTLALTD----------EGLLYAWGANTYGQLGTGNKNNL 273
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 236 (88.1 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 62/181 (34%), Positives = 89/181 (49%)
Query: 25 SGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNG 83
S V S GD +G LG G A R+ L + V VS G HSLAV + G
Sbjct: 40 SNGQVHSCGDNGRGQLGQ----RGAPCSAQLKERIRALETLHVDLVSCGKEHSLAVCHKG 95
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
V+AWG +E QLG G E + T P +++ L+ + + S A+ + G ++ W
Sbjct: 96 RVFAWGAGSEGQLGTG--EFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSW 153
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGR 203
G + GQLGLGK P RV +L G + +V+ G H+ A + G FGWG + G+
Sbjct: 154 GSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQ 213
Query: 204 I 204
+
Sbjct: 214 L 214
Score = 205 (77.2 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 48/149 (32%), Positives = 79/149 (53%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAA 124
++ ++G HSL + +NG V + G N QLG+ A + R+ L+ ++V
Sbjct: 24 ELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKE--RIRALETLHVDLV 81
Query: 125 FASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
S A+ G ++ WG GQLG G+ ++P +++ L KI +VS G H+
Sbjct: 82 SCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHS 141
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGKALES 213
LA +E G++F WG ++DG++G LGK S
Sbjct: 142 LALSEGGQVFSWGSNSDGQLG-LGKKFPS 169
Score = 146 (56.5 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 73/280 (26%), Positives = 117/280 (41%)
Query: 111 KRVEGLDQVNVCAAFASGVVSSAIG-DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEAL 169
+RV GL V + A ASG S + +G + G + RGQLG A + R+ AL
Sbjct: 16 RRV-GLGGVELRQA-ASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRAL 73
Query: 170 AGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESS--PLD----SNXXXX 223
+ VS G H+LA G++F WG ++G++G G+ E++ P+ ++
Sbjct: 74 ETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGT-GEFKETNLIPMKIKTLNDIKIK 132
Query: 224 XXXXXXXXXXXXXKAQKLVSEGMEKE------KYMPIIWEPFLV---EGVEVVDIACGFD 274
+ ++ S G + K P P V +G+ + +A G
Sbjct: 133 QVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGA 192
Query: 275 HSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISS--GLGHSLAICEVRS 332
HS L +G G N GQL K ++ ++ P SIS+ LG C
Sbjct: 193 HSFALSLSGTSFGWGRNNAGQLALHKNNVS----GQSYKPYSISALKNLGVIYISCGYEH 248
Query: 333 SNVTGGARGIVSWGWNRSSQLGRM--GPDNVPLVVEGLEG 370
+ V + ++G N QLG + P +VEG++G
Sbjct: 249 TVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDG 288
Score = 134 (52.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 48/176 (27%), Positives = 71/176 (40%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNN 82
+ G V S+G S G LGL P RV L + V+AG HS A++ +
Sbjct: 145 SEGGQVFSWGSNSDGQLGLGKKFPSQAS----PQRVRSLDGIPLAQVAAGGAHSFALSLS 200
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWV 142
G + WGRNN QL P + L + V + + +G ++
Sbjct: 201 GTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFT 260
Query: 143 WGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT-EDGKLFGWG 197
+G + GQLG E P VE + G + ++ G H LA GK+ +G
Sbjct: 261 FGDNTYGQLG-HSPTAEKSGPQLVEGIDG-LVSQIDCGSYHTLAYVYTTGKVVSFG 314
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 217 (81.4 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 58/175 (33%), Positives = 93/175 (53%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVPGL-PSDVTSVSAGHYHSLAVTNNGAVWAWGR 90
FG + G LGL + T +PT V L P V + G H+L T G V+A G
Sbjct: 59 FGSNNWGQLGLGSKST-----VSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGG 113
Query: 91 NNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQ 150
NNE QLG G E R+T++ ++ +A ++ S+A+ +DG L++WG + GQ
Sbjct: 114 NNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSN--TSAALTEDGELFMWGDNSEGQ 171
Query: 151 LGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
+GL +++T VP +V G+ I +S G+ H+ T +G+L+ +G G++G
Sbjct: 172 IGL-ENVTNVCVPQQVTV--GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLG 223
Score = 183 (69.5 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 58/186 (31%), Positives = 96/186 (51%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVP-GLPSDVTSVSAGHYHSLAVTNNGAVWAWGR 90
+GD S+G +GL ++T V P +V G P ++ +S G+YHS VT G ++ +G
Sbjct: 164 WGDNSEGQIGLE-NVTNV----CVPQQVTVGKP--ISWISCGYYHSAFVTTEGQLYTFG- 215
Query: 91 NNEVQLGRGALESRATWND--PKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKR 148
E + G+ L ++ N P+ V G+ V A G + + + +++ +G +
Sbjct: 216 --EPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGG--HTVVLTEKAVYTFGLGQF 271
Query: 149 GQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
GQLGLG + E VP +E + +KI ++ G H T+ G ++ +G DGR G LG
Sbjct: 272 GQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFG---DGRHGKLG 328
Query: 209 KALESS 214
LE+S
Sbjct: 329 LGLENS 334
Score = 170 (64.9 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 51/146 (34%), Positives = 78/146 (53%)
Query: 64 SDV-TSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL--DQVN 120
+DV T +S G H+ VT N ++ +G NN QLG G S++T + P V+ L ++V
Sbjct: 34 NDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG---SKSTVSKPTCVKALKPEKVK 90
Query: 121 VCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGE-KIVKVSF 179
A + + S G G ++ G + GQLGLG D E + + KI ++S
Sbjct: 91 FAACGRNHTLVSTEG--GKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSA 147
Query: 180 GWGHALAQTEDGKLFGWGYSADGRIG 205
G + A TEDG+LF WG +++G+IG
Sbjct: 148 GSNTSAALTEDGELFMWGDNSEGQIG 173
Score = 142 (55.0 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 58/201 (28%), Positives = 98/201 (48%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTR---VPGLPSD--VTSVSAGHYHSL 77
S G V + G ++G LGL GD E + + S + +SAG S
Sbjct: 102 STEGGKVYAAGGNNEGQLGL--------GDTEERSTFHLISFFTSQRKIKQLSAGSNTSA 153
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVN--VCAAFASGVVSSAIG 135
A+T +G ++ WG N+E Q+G LE+ P++V ++ C + S V++
Sbjct: 154 ALTEDGELFMWGDNSEGQIG---LENVTNVCVPQQVTVGKPISWISCGYYHSAFVTT--- 207
Query: 136 DDGSLWVWGKSKRGQLGLGKDI-TEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
+G L+ +G+ + G+LGL + +P V + G K+V+V+ G GH + TE ++
Sbjct: 208 -EGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLTEKA-VY 264
Query: 195 GWGYSADGRIGNLGKAL-ESS 214
+G G++G LG L E+S
Sbjct: 265 TFGLGQFGQLG-LGTFLFETS 284
Score = 142 (55.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 48/157 (30%), Positives = 74/157 (47%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGR 90
+FG+ G LGLP L V +P VPG+P V V+ G H++ +T AV+ +G
Sbjct: 213 TFGEPECGKLGLPNQLL-VNHRMPQP--VPGIPGKVVQVACGGGHTVVLTEK-AVYTFGL 268
Query: 91 NNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSA-IGDDGSLWVWGKSKRG 149
QLG G + PK +E + + + A G +A I D G ++ +G + G
Sbjct: 269 GQFGQLGLGTFLFETSV--PKAIEHIKDQKI-SFIACGENHTALITDMGLMYTFGDGRHG 325
Query: 150 QLGLG-KDITEAIVPSRVEALAGEKIVKVSFGWGHAL 185
+LGLG ++ T +P+ + VS G H L
Sbjct: 326 KLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTL 362
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 56/216 (25%), Positives = 93/216 (43%)
Query: 131 SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTED 190
++ + + L+++G + GQLGLG T + P+ V+AL EK+ + G H L TE
Sbjct: 47 TAVVTGNNKLYMFGSNNWGQLGLGSKSTVS-KPTCVKALKPEKVKFAACGRNHTLVSTEG 105
Query: 191 GKLFGWGYSADGRIGNLGKALESSPLD------SNXXXXXXXXXXXXXXXXXKAQKLV-- 242
GK++ G + +G++G LG E S S + +L
Sbjct: 106 GKVYAAGGNNEGQLG-LGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMW 164
Query: 243 ---SEGMEKEKYMPIIWEPFLVE-GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
SEG + + + P V G + I+CG+ HS + G L + G G+LG
Sbjct: 165 GDNSEGQIGLENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGL 224
Query: 299 EKQDM--GMFPVDINFHP---VSISSGLGHSLAICE 329
Q + P + P V ++ G GH++ + E
Sbjct: 225 PNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTE 260
Score = 64 (27.6 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 258 PFLVEGV--EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
P V G+ +VV +ACG H++VL V + G +GQLG
Sbjct: 235 PQPVPGIPGKVVQVACGGGHTVVLTEKAVY-TFGLGQFGQLG 275
Score = 55 (24.4 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 269 IACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
IACG +H+ ++ G++ + G +G+LG
Sbjct: 300 IACGENHTALITDMGLMYTFGDGRHGKLG 328
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 209 (78.6 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 65/219 (29%), Positives = 105/219 (47%)
Query: 16 TSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGG----DAYEP--TRVPGLPSDVTSV 69
T+ + S G + ++G QG LG + G+ +AY P L + +
Sbjct: 175 TAHVVALSEEGL-LQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVK-IMQL 232
Query: 70 SAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGV 129
S G YH+ A+++ G V+ WG + QLG +L+S P+RV GLD V++ GV
Sbjct: 233 SCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGV 292
Query: 130 VSSAIGDDGSLWVWGKSKRGQLGLGKD------ITEA--IVPSRVEALAGEKIVK-VSFG 180
+ A+ +G+L+ WG + GQLGLG ++ ++ V L V+ V+ G
Sbjct: 293 HTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACG 352
Query: 181 WGHALAQTEDGKLFGWGYSADGRIGN--LGKALESSPLD 217
H L +G++ GWGY++ G+ N A SP+D
Sbjct: 353 HSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVD 391
Score = 174 (66.3 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 51/163 (31%), Positives = 78/163 (47%)
Query: 56 PTRVPGLPSDVTS----VSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPK 111
P + G P+ S +S G H+ AV ++G+++AWG N QLG G R PK
Sbjct: 49 PPELFGCPAGANSRWLDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGR---KHPK 105
Query: 112 RVEGLDQVNV----CAAFASGVVSSAIGDDGSL-----WVWGKSKRGQLGLGKDITEAIV 162
+V+ L V C AF + ++ +DG+L WVWG+++ L +
Sbjct: 106 KVKQLQSEFVKFVSCGAFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNL---PRLFSGAF 162
Query: 163 PSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
P A I +VS G H +A +E+G L WGY+ G++G
Sbjct: 163 P------ATTAIRQVSCGTAHVVALSEEGLLQAWGYNEQGQLG 199
Score = 165 (63.1 bits), Expect = 7.2e-16, Sum P(2) = 7.2e-16
Identities = 47/152 (30%), Positives = 73/152 (48%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGA----LESRATWNDPKRV--EGLDQV 119
+ VS G H +A++ G + AWG N + QLGRG L++ N + E + V
Sbjct: 168 IRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELV 227
Query: 120 NVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLG---LGKDITEAIVPSRVEALAGEKIVK 176
+ ++A+ D G ++ WG GQLG L E ++P RV L G + +
Sbjct: 228 KIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKE-LIPRRVVGLDGVSMKE 286
Query: 177 VSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
V+ G H A + +G L+ WG G++G LG
Sbjct: 287 VACGGVHTCALSLEGALYAWGGGQAGQLG-LG 317
Score = 107 (42.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 42/150 (28%), Positives = 69/150 (46%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGV---VS- 131
S+++ A++ WG N Q GR E PK++ ++ C A A+ +S
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRN--EQEKLLRIPKQLP--PELFGCPAGANSRWLDISC 68
Query: 132 -----SAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFG--WGHA 184
+A+ DGSL+ WG ++ GQLG G ++ P +V+ L E + VS G A
Sbjct: 69 GREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKH-PKKVKQLQSEFVKFVSCGAFCTAA 127
Query: 185 LAQTE--DG-----KLFGWGYSADGRIGNL 207
+A+ DG +L+ WG + + L
Sbjct: 128 IAEPRENDGTLSTSRLWVWGQNQGSNLPRL 157
Score = 103 (41.3 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 258 PFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF---HP 314
P LV +V +ACG H+LV R G + G N YGQ EK +P +++
Sbjct: 338 PVLVIPTDVRLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVGQV 397
Query: 315 VSISSGLGHSLAICEVRS 332
+++G GHS + + S
Sbjct: 398 RKLAAGGGHSAVLTDAFS 415
Score = 74 (31.1 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF 306
++GV + ++ACG H+ L G L + G GQLG Q G F
Sbjct: 279 LDGVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQS-GFF 323
Score = 70 (29.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 35/124 (28%), Positives = 55/124 (44%)
Query: 244 EGMEKEKYMPIIWEPFLVEGVEVVDI---ACGFDHSLVLGRNGVLLSCGSNVYGQLGREK 300
EG++ + + + FL E E+V I +CG H+ L G + + G GQLG
Sbjct: 205 EGLQAPRVINA-YAKFLDEAPELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVS 263
Query: 301 QDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGA---RG-IVSWGWNRSSQLGRM 356
G D P + GL +++ EV V A G + +WG ++ QLG +
Sbjct: 264 LQSG----DKELIPRRVV-GLD-GVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLG-L 316
Query: 357 GPDN 360
GP +
Sbjct: 317 GPQS 320
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 231 (86.4 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 63/200 (31%), Positives = 101/200 (50%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG--LPSDVTSVSAGHYHS 76
+ + + G V ++G LG T+ G+ P +V L V V+ G +HS
Sbjct: 87 VLLTTEDGV-VYAWGHNGYSQLGNGTTNQGIA-----PVQVCTNLLIKQVIEVACGSHHS 140
Query: 77 LAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AIG 135
+A+ +G ++AWG NN Q+G G+ ++ T P++V A G SS A+
Sbjct: 141 MALAADGELFAWGYNNCGQVGSGSTANQPT---PRKVTNCLHTKRVVNIACGQTSSMAVL 197
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
D G ++ WG + GQLGLG + + + P RV AL G + ++ G+ H LA T++G L+
Sbjct: 198 DSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYA 256
Query: 196 WGYSADGRIGNLGKALESSP 215
WG + G++G K SP
Sbjct: 257 WGANTYGQLGTGSKNNLLSP 276
Score = 178 (67.7 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 50/166 (30%), Positives = 78/166 (46%)
Query: 47 TGVGGDAYEPTRVPGL-PSDVTSVSAGHY-HSLAVTNNGAVWAWGRNNEVQLGRGALESR 104
TG P ++ L + S+S G H L T +G V+AWG N QLG G
Sbjct: 56 TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQG 115
Query: 105 ATWNDPKRV-EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVP 163
P +V L V S A+ DG L+ WG + GQ+G G + P
Sbjct: 116 IA---PVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQP-TP 171
Query: 164 SRV-EALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
+V L +++V ++ G ++A + G+++GWGY+ +G++G LG
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLG-LG 216
Score = 162 (62.1 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 43/142 (30%), Positives = 76/142 (53%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA-AFASGVVSSAI 134
++ VT+N V+ +G N LG G +S PK++E L + + ++ SG
Sbjct: 34 AIYVTDNDEVFVFGLNYSNCLGTGDNQSTLV---PKKLEALCGKKIKSLSYGSGPHVLLT 90
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGWGHALAQTEDGKL 193
+DG ++ WG + QLG G + I P +V L +++++V+ G H++A DG+L
Sbjct: 91 TEDGVVYAWGHNGYSQLGNGTT-NQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGEL 149
Query: 194 FGWGYSADGRIGNLGKALESSP 215
F WGY+ G++G+ A + +P
Sbjct: 150 FAWGYNNCGQVGSGSTANQPTP 171
Score = 157 (60.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 52/193 (26%), Positives = 91/193 (47%)
Query: 13 NVLTSRIF-MRSASGTAVVSFGDGSQGALGLPT-SLTGVGGDAYEPT--RVPGL--PSDV 66
N+L ++ + S ++ DG A G G G A +PT +V V
Sbjct: 124 NLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRV 183
Query: 67 TSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFA 126
+++ G S+AV ++G V+ WG N QLG G ++ T P RV L + V
Sbjct: 184 VNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT---PVRVAALHGMCVNQIVC 240
Query: 127 SGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG-H-A 184
+ A+ D+G L+ WG + GQLG G + P+++ + E++++++ H +
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGSK-NNLLSPTQI-MVEKERVIEIAACHSTHTS 298
Query: 185 LAQTEDGKLFGWG 197
A+T+ G ++ WG
Sbjct: 299 AAKTQGGHVYMWG 311
Score = 126 (49.4 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 41/124 (33%), Positives = 60/124 (48%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V +G G LGL G G+ P RV L V + G+ H+LA+T+ G ++A
Sbjct: 202 VYGWGYNGNGQLGL-----GNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYA 256
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVE-GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG N QLG G S+ P ++ ++V AA S S+A G +++WG+
Sbjct: 257 WGANTYGQLGTG---SKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQC 313
Query: 147 KRGQ 150
RGQ
Sbjct: 314 -RGQ 316
Score = 92 (37.4 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
+ G+ V I CG+ H+L L G+L + G+N YGQLG ++ + P I
Sbjct: 230 LHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI 279
Score = 80 (33.2 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 29/101 (28%), Positives = 47/101 (46%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN-FHPVSISS---GL 321
VV+IACG S+ + +G + G N GQLG + PV + H + ++ G
Sbjct: 183 VVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGY 242
Query: 322 GHSLAICEVRSSNVTGGARGIV-SWGWNRSSQLGRMGPDNV 361
H+LA+ + G++ +WG N QLG +N+
Sbjct: 243 AHTLALTD----------EGLLYAWGANTYGQLGTGSKNNL 273
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 225 (84.3 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 63/192 (32%), Positives = 90/192 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V+S G S G LG+P P + V ++AG H++A T +G V+ W
Sbjct: 122 VLSCGSNSFGQLGVPHGPRR----CVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQW 177
Query: 89 GRNNEVQLGRGALESRA-----TWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
G GR + T +P RV GL+ A S+++ D G ++VW
Sbjct: 178 G-TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVW 236
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEA--LAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD 201
G +K GQL + VP ++EA EK+ + GW H +AQTE GK+F WG AD
Sbjct: 237 GSNKHGQLA--NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWG-RAD 293
Query: 202 GRIGNLGKALES 213
G LG+ LE+
Sbjct: 294 --YGQLGRKLET 303
Score = 158 (60.7 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 50/175 (28%), Positives = 80/175 (45%)
Query: 25 SGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGL--PSDVTSVSAGHYHSLAVTNN 82
+ A+ ++G S G LGL G D P ++ P V ++ G HS VT+
Sbjct: 13 AAAALFAWGANSYGQLGL-----GHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDG 67
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWV 142
G ++ G N + QLG G E + K + G V + ++ + ++G +
Sbjct: 68 GDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIM---LTENGQVLS 124
Query: 143 WGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G + GQLG+ +VP +E L EK+V ++ G HA+A T G +F WG
Sbjct: 125 CGSNSFGQLGVPHGPRRCVVPQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWG 178
Score = 132 (51.5 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 42/125 (33%), Positives = 67/125 (53%)
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQV-NVCAAFASGVVSSAIGDDGSLWV 142
A++AWG N+ QLG G E P+++ + +V G S+ + D G L+V
Sbjct: 16 ALFAWGANSYGQLGLGHKEDVLL---PQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFV 72
Query: 143 WGKSKRGQLGLGKDITEAIVP--SRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
G +K GQLGLG TE I P + ++L G I +V+ GW + TE+G++ G ++
Sbjct: 73 CGLNKDGQLGLGH--TEDI-PYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNS 129
Query: 201 DGRIG 205
G++G
Sbjct: 130 FGQLG 134
Score = 119 (46.9 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 32/88 (36%), Positives = 45/88 (51%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMG-MFPVDINFHP---VSIS 318
G + +ACG+D +++L NG +LSCGSN +GQLG + P I H V I+
Sbjct: 100 GCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIA 159
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWG 346
+GL H A+ S V G+ S G
Sbjct: 160 AGLRH--AVAATASGIVFQWGTGLASCG 185
Score = 107 (42.7 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 131 SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVK-VSFGWGHALAQTE 189
S A +L+ WG + GQLGLG + ++P ++ + V+ ++ G GH+ T+
Sbjct: 8 SEAAPAAAALFAWGANSYGQLGLGHK-EDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD 66
Query: 190 DGKLFGWGYSADGRIGNLG 208
G LF G + DG++G LG
Sbjct: 67 GGDLFVCGLNKDGQLG-LG 84
Score = 70 (29.7 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 36/108 (33%), Positives = 45/108 (41%)
Query: 257 EPFLVEGVEVVDIAC---GFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH 313
EP V G+E C G DHS L G + GSN +GQL E + + P I H
Sbjct: 202 EPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPV-PQKIEAH 260
Query: 314 ------PVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGR 355
+I SG H +A E TG + +WG QLGR
Sbjct: 261 CFQNEKVTAIWSGWTHLVAQTE------TGK---MFTWGRADYGQLGR 299
Score = 52 (23.4 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 257 EPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
E + +V I G+ H + G + + G YGQLGR+
Sbjct: 258 EAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRK 300
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 233 (87.1 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 93/360 (25%), Positives = 157/360 (43%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGD-AYEPTRVPG-LPSDVTSVSAGHYHSLAVTNNGAVW 86
++ +G+ S G LGL G+ + EP + + V V G H++ V ++G V+
Sbjct: 1 MLCWGNASFGQLGLG----GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
G N+ QLG +SR P++V LD N+ A + A+ D G ++ WG
Sbjct: 57 TCGCNDLGQLGHE--KSR---KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 147 KRGQLGL-GKDITEAI-VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
GQLGL G + E I VP +++L+ +IV+V+ G+ H+LA ++ ++F WG + G++
Sbjct: 112 SDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 205 G-----------NLGKALESSPLDSNXXXXXXXXXXXXXXXXXK--AQKLVSEGM--EKE 249
G L K+L P K G+ E +
Sbjct: 170 GLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 250 KYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD 309
+Y+P + + + ++V I CG DH+ L + G + + G+ YGQLG + P
Sbjct: 230 RYVPNLLKSLRTQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRK 287
Query: 310 INFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--VPLVVEG 367
+ + + +A +S + I S+G + QLG N P V+G
Sbjct: 288 V----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 233 (87.1 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 93/360 (25%), Positives = 157/360 (43%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGD-AYEPTRVPG-LPSDVTSVSAGHYHSLAVTNNGAVW 86
++ +G+ S G LGL G+ + EP + + V V G H++ V ++G V+
Sbjct: 1 MLCWGNASFGQLGLG----GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
G N+ QLG +SR P++V LD N+ A + A+ D G ++ WG
Sbjct: 57 TCGCNDLGQLGHE--KSR---KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 147 KRGQLGL-GKDITEAI-VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
GQLGL G + E I VP +++L+ +IV+V+ G+ H+LA ++ ++F WG + G++
Sbjct: 112 SDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 205 G-----------NLGKALESSPLDSNXXXXXXXXXXXXXXXXXK--AQKLVSEGM--EKE 249
G L K+L P K G+ E +
Sbjct: 170 GLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 250 KYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD 309
+Y+P + + + ++V I CG DH+ L + G + + G+ YGQLG + P
Sbjct: 230 RYVPNLLKSLRTQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRK 287
Query: 310 INFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--VPLVVEG 367
+ + + +A +S + I S+G + QLG N P V+G
Sbjct: 288 V----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 233 (87.1 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 93/360 (25%), Positives = 157/360 (43%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGD-AYEPTRVPG-LPSDVTSVSAGHYHSLAVTNNGAVW 86
++ +G+ S G LGL G+ + EP + + V V G H++ V ++G V+
Sbjct: 1 MLCWGNASFGQLGLG----GIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
G N+ QLG +SR P++V LD N+ A + A+ D G ++ WG
Sbjct: 57 TCGCNDLGQLGHE--KSR---KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 147 KRGQLGL-GKDITEAI-VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
GQLGL G + E I VP +++L+ +IV+V+ G+ H+LA ++ ++F WG + G++
Sbjct: 112 SDGQLGLLGSE--ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 205 G-----------NLGKALESSPLDSNXXXXXXXXXXXXXXXXXK--AQKLVSEGM--EKE 249
G L K+L P K G+ E +
Sbjct: 170 GLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 250 KYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD 309
+Y+P + + + ++V I CG DH+ L + G + + G+ YGQLG + P
Sbjct: 230 RYVPNLLKSLRTQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRK 287
Query: 310 INFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--VPLVVEG 367
+ + + +A +S + I S+G + QLG N P V+G
Sbjct: 288 V----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 177 (67.4 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 55/175 (31%), Positives = 83/175 (47%)
Query: 42 LPTSLTGV---GGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGR 98
+P L+ V GG P R+P L ++V V+AG VT +G + W + G
Sbjct: 313 IPPPLSSVYTWGGGLSAPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW-EAPPLGAGG 371
Query: 99 GALESRAT-WNDPKRV----EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGL 153
GAL A P+ V EG V + + ++ + D G + +G G LG
Sbjct: 372 GALLPGAVEQQQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGH 431
Query: 154 GKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
G + + P+ VEAL G ++V+V+ G H LA + + +LF WG GR+G LG
Sbjct: 432 G-GLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLG-LG 484
Score = 145 (56.1 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 52/198 (26%), Positives = 86/198 (43%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
+++FG GS G LG G D +PT V L ++ V+ G H LA++ ++A
Sbjct: 418 IMTFGSGSNGCLG-----HGGLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFA 472
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WGR + +LG G ES + G + V S V+ + G + +K
Sbjct: 473 WGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNK 532
Query: 148 RG--QLGLGKD------ITEAI--VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G L LG++ + EA+ P L E ++ V G H+ A T G + +G
Sbjct: 533 LGLDHLSLGEEPALHQQVEEALNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFG 592
Query: 198 YSADGRIGNLGKALESSP 215
+ G++G + + +P
Sbjct: 593 SNQHGQLGTNARRVSRAP 610
Score = 137 (53.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 37/101 (36%), Positives = 53/101 (52%)
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALE-SRATWNDPKRVEGLDQVNVCAAFA 126
SV G HS AVT +G + +G N QLG A SRA P +V+GL + +
Sbjct: 571 SVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRA----PCQVQGLQGIKIAMVAC 626
Query: 127 SGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVE 167
+ AIG +G ++ WGK RG+LG +D +A +P V+
Sbjct: 627 GDAFTVAIGAEGEVYSWGKGARGRLGR-RD-EDAALPRPVQ 665
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 53/189 (28%), Positives = 83/189 (43%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAW 88
++G G G LGL T +++ P +VP P + V G S+ +T G A
Sbjct: 472 AWGRGDGGRLGLGTR------ESHSCPQQVPMPPGQEAQRVICGIDSSVILTVPGQALAC 525
Query: 89 GRNNEVQLGRGAL---ESRATWND--------PKRVEGLDQVNVCAAFASGVVSSAIGDD 137
G N +LG L E A P LDQ + + S+A+
Sbjct: 526 GSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPLGSAPLDQEPLLSVDLGTAHSAAVTAS 585
Query: 138 GSLWVWGKSKRGQLGLG-KDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGW 196
G + +G ++ GQLG + ++ A P +V+ L G KI V+ G +A +G+++ W
Sbjct: 586 GDCYTFGSNQHGQLGTNARRVSRA--PCQVQGLQGIKIAMVACGDAFTVAIGAEGEVYSW 643
Query: 197 GYSADGRIG 205
G A GR+G
Sbjct: 644 GKGARGRLG 652
Score = 102 (41.0 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 37/121 (30%), Positives = 57/121 (47%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP-----VD--INFHPV 315
G E + CG D S++L G L+CGSN + +LG + +G P V+ +NF P+
Sbjct: 500 GQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPL 559
Query: 316 SISSGLGH----SLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGP--DNVPLVVEGLE 369
S+ L S+ + S+ VT ++G N+ QLG P V+GL+
Sbjct: 560 G-SAPLDQEPLLSVDLGTAHSAAVTASG-DCYTFGSNQHGQLGTNARRVSRAPCQVQGLQ 617
Query: 370 G 370
G
Sbjct: 618 G 618
Score = 84 (34.6 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM-FPVDIN-FHPVSIS 318
++G+++ +ACG ++ +G G + S G G+LGR +D + PV ++ P +++
Sbjct: 616 LQGIKIAMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAALPRPVQLDETQPYTVT 675
Query: 319 S 319
S
Sbjct: 676 S 676
Score = 80 (33.2 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 31/114 (27%), Positives = 48/114 (42%)
Query: 247 EKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF 306
E + P+ P E + VD+ G HS + +G + GSN +GQLG + +
Sbjct: 552 EALNFTPLGSAPLDQEPLLSVDL--GTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRA 609
Query: 307 PVDINFHPVSISSGLGHSLAICEVRSSNVTGGARG-IVSWGWNRSSQLGRMGPD 359
P + G+ ++ C + V GA G + SWG +LGR D
Sbjct: 610 PCQVQG-----LQGIKIAMVACG-DAFTVAIGAEGEVYSWGKGARGRLGRRDED 657
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 232 (86.7 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 103/363 (28%), Positives = 162/363 (44%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VTSVSAGHYHSLAVTNNGAVW 86
++ +G S G G+ ++L G+ EP +V SD + V+ G HS+ + +G V+
Sbjct: 1 MLCWGYWSLGQPGISSNLQGI---VAEP-QVCRFVSDRSIKEVACGGNHSVFLLEDGEVY 56
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
G N + QLG E N P+++ L ++ S A+ D G L+ WG
Sbjct: 57 TCGVNTKGQLGH---EREG--NKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
GQLGL VP ++ L + I++VS G H LA DG+ F WG ++ G++G
Sbjct: 112 SDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLG- 170
Query: 207 LGKALES--SPLDSNXXXXXXXXXXXXXXXXXKAQKLVSE----GM----------EKEK 250
LGK S SP A L GM EK++
Sbjct: 171 LGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDR 230
Query: 251 YMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP--- 307
P + L+ +VV I+CG +H+ VL ++G + + G+ GQLG + + + P
Sbjct: 231 ESPCHVK--LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288
Query: 308 VDINFHPVS-ISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLV 364
+++ V+ I+ G H+LA+ V SS + I ++G QLG NV P
Sbjct: 289 LELMGSEVTQIACGRQHTLAL--VPSSGL------IYAFGCGAKGQLGTGHTCNVKCPSP 340
Query: 365 VEG 367
V+G
Sbjct: 341 VKG 343
Score = 123 (48.4 bits), Expect = 0.00029, P = 0.00029
Identities = 40/130 (30%), Positives = 65/130 (50%)
Query: 254 IIWEPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
I+ EP + V + ++ACG +HS+ L +G + +CG N GQLG E++ G P I
Sbjct: 21 IVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHERE--GNKPEQI 78
Query: 311 NF----HPVSISSGLGHSLAICEVRSSNVTGGARG-IVSWGWNRSSQLGRMGPDN---VP 362
H + ++ G HSLA+ + RG + SWG QLG M ++ VP
Sbjct: 79 GALADQHIIHVACGESHSLALSD----------RGQLFSWGAGSDGQLGLMTTEDSVAVP 128
Query: 363 LVVEGLEGES 372
+++ L ++
Sbjct: 129 RLIQKLNQQT 138
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 238 (88.8 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 90/299 (30%), Positives = 134/299 (44%)
Query: 20 FMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTS---VSAGHY-H 75
F+ A+GT V++ G+GS G LG G D + T + L V + S G H
Sbjct: 3297 FVIQANGT-VLACGEGSYGRLG-----QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 3350
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
S+A+T +G V++WG + +LG G + + P+++E L V S+ +
Sbjct: 3351 SMALTESGEVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVVQMSCGFKHSAVVT 3407
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
DG L+ +G G+LGLG + + P RV AL G +I +V+ G H LA + DG +
Sbjct: 3408 SDGKLFTFGNGDYGRLGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMV- 3465
Query: 196 WGYSADGRIGNLG---KALESSP--LD--SNXXXXXXXXXXXXXXXXXK--------AQK 240
W + DG G LG +SSP +D K +
Sbjct: 3466 WAFG-DGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 3524
Query: 241 LVS--EGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
L+ EG + P P L GV + D+A G +H+L L G + + GSN GQLG
Sbjct: 3525 LIGLPEGRARNHNRPQ-QIPVLA-GVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLG 3581
Score = 176 (67.0 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 51/171 (29%), Positives = 78/171 (45%)
Query: 38 GALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLG 97
GA G L G + P P S V G + + NG V A G + +LG
Sbjct: 3260 GA-GRHGQLAEAGRNVMVPAAAPSF-SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLG 3317
Query: 98 RGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDI 157
+G + ++G + + S S A+ + G ++ WG G+LG G
Sbjct: 3318 QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSD 3377
Query: 158 TEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
+ P ++EAL GE++V++S G+ H+ T DGKLF +G GR+G LG
Sbjct: 3378 RQRR-PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLG-LG 3426
Score = 173 (66.0 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 57/194 (29%), Positives = 97/194 (50%)
Query: 20 FMRSASGTA---VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYH 75
F SA T+ + +FG+G G LGL G + P RV L + V+ G H
Sbjct: 3400 FKHSAVVTSDGKLFTFGNGDYGRLGL-----GNTSNKKLPERVTALEGYQIGQVACGLNH 3454
Query: 76 SLAVTNNGA-VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
+LAV+ +G+ VWA+G + +LG G ++++ P++V+ L + + S A+
Sbjct: 3455 TLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS---PQKVDVLCGIGIKKVACGTQFSVAL 3511
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
DG ++ +G+ + L G+ P ++ LAG I V+ G H LA G ++
Sbjct: 3512 TKDGHVYTFGQDRLIGLPEGRARNHNR-PQQIPVLAGVVIEDVAVGAEHTLALASTGDVY 3570
Query: 195 GWGYSADGRIGNLG 208
WG +++G++G LG
Sbjct: 3571 AWGSNSEGQLG-LG 3583
Score = 69 (29.3 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 30/116 (25%), Positives = 53/116 (45%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSN-VYG-QLGREKQDMG--MFPVDINFHPVSIS 318
G+ + +ACG S+ L ++G + + G + + G GR + PV ++
Sbjct: 3495 GIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVA 3554
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEGES 372
G H+LA+ TG + +WG N QLG ++V P +V L+G++
Sbjct: 3555 VGAEHTLALAS------TGD---VYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 3601
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 176 (67.0 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 54/175 (30%), Positives = 83/175 (47%)
Query: 42 LPTSLTGV---GGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGR 98
+P L+ V GG P R+P L ++V V+AG VT +G + W + G
Sbjct: 307 IPPPLSSVYAWGGGLGTPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW-EAPPLGAGG 365
Query: 99 GALESRATWN-DPKRV----EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGL 153
G+L A P+ + EG V + ++ + D G + +G G LG
Sbjct: 366 GSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGH 425
Query: 154 GKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
G +T+ P+ VEAL G ++V+V+ G H LA + + +LF WG GR+G LG
Sbjct: 426 GS-LTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLG-LG 478
Score = 143 (55.4 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 53/191 (27%), Positives = 85/191 (44%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
+++FG GS G LG SLT D +PT V L ++ V+ G H LA++ ++A
Sbjct: 412 IMTFGSGSNGCLG-HGSLT----DISQPTIVEALLGYEMVQVACGASHVLALSTERELFA 466
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WGR + +LG G ES + G + V S ++ + G G ++
Sbjct: 467 WGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTV---PGQALACGSNR 523
Query: 148 RGQLGLGK-DITEAIVP-SRVE-----ALAG------EKIVKVSFGWGHALAQTEDGKLF 194
+LGL + E VP +VE L G E ++ + G H+ A T G +
Sbjct: 524 FNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCY 583
Query: 195 GWGYSADGRIG 205
+G + G++G
Sbjct: 584 TFGSNQHGQLG 594
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 30/86 (34%), Positives = 44/86 (51%)
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALE-SRATWNDPKRVEGLDQVNVCAAFA 126
S+ G HS AVT +G + +G N QLG SRA P +V+GL+ + +
Sbjct: 565 SIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRA----PCKVQGLEGIKMAMVAC 620
Query: 127 SGVVSSAIGDDGSLWVWGKSKRGQLG 152
+ AIG + ++ WGK RG+LG
Sbjct: 621 GDAFTVAIGAESEVYSWGKGARGRLG 646
Score = 102 (41.0 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 38/121 (31%), Positives = 56/121 (46%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSIS-SGL 321
G E + CG D S++L G L+CGSN + +LG + +G PV ++S + L
Sbjct: 494 GQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLL 553
Query: 322 GH---------SLAICEVRSSNVTGGARGIVSWGWNRSSQLG---RMGPDNVPLVVEGLE 369
G S+ + S+ VT ++G N+ QLG R G P V+GLE
Sbjct: 554 GSAPLDQEPLLSIDLGTAHSAAVTASG-DCYTFGSNQHGQLGTNTRRG-SRAPCKVQGLE 611
Query: 370 G 370
G
Sbjct: 612 G 612
Score = 98 (39.6 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM-FPVDIN-FHPVSIS 318
+EG+++ +ACG ++ +G + S G G+LGR +D G+ PV ++ HP +++
Sbjct: 610 LEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVT 669
Query: 319 S-GLGHSLAICEVRS 332
S H + VRS
Sbjct: 670 SVSCCHGNTLLAVRS 684
Score = 73 (30.8 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 25/102 (24%), Positives = 41/102 (40%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHSL 325
++ I G HS + +G + GSN +GQLG + P + G+ ++
Sbjct: 563 LLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-----LEGIKMAM 617
Query: 326 AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPD-NVPLVVE 366
C + G + SWG +LGR D +P V+
Sbjct: 618 VACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQ 659
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 176 (67.0 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 55/175 (31%), Positives = 83/175 (47%)
Query: 42 LPTSLTGV---GGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGR 98
+P L+ V GG P R+P L ++V V+AG VT +G + W + G
Sbjct: 315 IPPPLSSVYTWGGGLSAPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW-EAPPLGAGG 373
Query: 99 GALESRATWN-DPKRV----EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGL 153
GAL A P+ V EG V + + ++ + D G + +G G LG
Sbjct: 374 GALLPGAIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGH 433
Query: 154 GKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
G + + P+ VEAL G ++V+V+ G H LA + + +LF WG GR+G LG
Sbjct: 434 GS-LNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLG-LG 486
Score = 137 (53.3 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 51/201 (25%), Positives = 86/201 (42%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
+++FG GS G LG G D +PT V L ++ V+ G H LA++ ++A
Sbjct: 420 IMTFGSGSNGCLG-----HGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFA 474
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WGR + +LG G ES G + V S ++ + G G ++
Sbjct: 475 WGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTV---PGQALACGSNR 531
Query: 148 RGQLGL-----GKD------ITEAIV--PSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
+LGL G++ + EA+ P L E ++ V G H+L T G +
Sbjct: 532 FNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCY 591
Query: 195 GWGYSADGRIGNLGKALESSP 215
+G + G++G + + +P
Sbjct: 592 TFGSNQHGQLGTNARRVSRAP 612
Score = 137 (53.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 38/101 (37%), Positives = 53/101 (52%)
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALE-SRATWNDPKRVEGLDQVNVCAAFA 126
SV G HSL +T +G + +G N QLG A SRA P RV+GL + +
Sbjct: 573 SVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRA----PCRVQGLQGIKISTVAC 628
Query: 127 SGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVE 167
+ AIG +G ++ WGK RG+LG KD +A +P V+
Sbjct: 629 GDAFTVAIGAEGEVFSWGKGARGRLGR-KD-EDAGLPRPVQ 667
Score = 119 (46.9 bits), Expect = 0.00056, P = 0.00056
Identities = 54/189 (28%), Positives = 79/189 (41%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWG 89
++G G G LGL T + P VP P + V G S+ +T G A G
Sbjct: 474 AWGRGDGGRLGLGTRESHCC-----PQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACG 528
Query: 90 RNNEVQLGRGAL------------ESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDD 137
N +LG L E T+ P LDQ + + S +
Sbjct: 529 SNRFNKLGLDPLSLGEEPAPHQQVEEAVTFT-PLGSAPLDQEPLLSVDLGPAHSLLLTAS 587
Query: 138 GSLWVWGKSKRGQLGLG-KDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGW 196
G + +G ++ GQLG + ++ A P RV+ L G KI V+ G +A +G++F W
Sbjct: 588 GDCYTFGSNQHGQLGTNARRVSRA--PCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSW 645
Query: 197 GYSADGRIG 205
G A GR+G
Sbjct: 646 GKGARGRLG 654
Score = 101 (40.6 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM-FPVDIN-FHPVSIS 318
++G+++ +ACG ++ +G G + S G G+LGR+ +D G+ PV ++ HP +++
Sbjct: 618 LQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRPVQLDETHPYTVT 677
Query: 319 S-GLGHSLAICEVR 331
S H + VR
Sbjct: 678 SVSCCHGNTLLAVR 691
Score = 91 (37.1 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 34/120 (28%), Positives = 55/120 (45%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD-------INFHPV 315
G E + CG D S++L G L+CGSN + +LG + +G P + F P+
Sbjct: 502 GQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPL 561
Query: 316 SISSGLGHS--LAICEVRSSNVTGGARG-IVSWGWNRSSQLGRMGP--DNVPLVVEGLEG 370
S+ L L++ + ++ A G ++G N+ QLG P V+GL+G
Sbjct: 562 G-SAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQGLQG 620
Score = 86 (35.3 bits), Expect = 8.2e-15, Sum P(2) = 8.2e-15
Identities = 36/122 (29%), Positives = 53/122 (43%)
Query: 247 EKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF 306
E + P+ P E + VD+ G HSL+L +G + GSN +GQLG + +
Sbjct: 554 EAVTFTPLGSAPLDQEPLLSVDL--GPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRA 611
Query: 307 PVDINFHPVSISSGLGHSLAICEVRSSNVTGGARG-IVSWGWNRSSQLGRMGPD-NVPLV 364
P + G+ S C + V GA G + SWG +LGR D +P
Sbjct: 612 PCRVQG-----LQGIKISTVACG-DAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRP 665
Query: 365 VE 366
V+
Sbjct: 666 VQ 667
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 175 (66.7 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 44/146 (30%), Positives = 72/146 (49%)
Query: 71 AGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVV 130
AG HS+AVT+ G V+ +G NN QLG G E A + ++G V + A A
Sbjct: 150 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQG---VRIIQAAAGAAR 206
Query: 131 SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIV-PSRVEALAGEKIVKVSFGWGHALAQTE 189
+ I DDG ++ GK G+ G T+ + P V +L +V+ + G +
Sbjct: 207 TMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSR 266
Query: 190 DGKLFGWGYSADGRIGNLGKALESSP 215
+GK++ + + DGR+G+ +A + P
Sbjct: 267 EGKVYTFSWGNDGRLGHQTEAADVEP 292
Score = 164 (62.8 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 61/202 (30%), Positives = 87/202 (43%)
Query: 25 SGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGA 84
+G +V S G G G LG + E ++ L V V+AG +H+ V +G
Sbjct: 322 NGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRV--VAAGAWHAAVVGQDGR 379
Query: 85 V--WAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWV 142
V W WGR LG G E + PK VEGL V + + DDG ++
Sbjct: 380 VCTWGWGRYG--CLGHGNEECESV---PKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYS 434
Query: 143 WGKSKRGQLG-------LGKDITEAIVPSRVEAL--AGEKIVKVSFG----WG-HALAQT 188
+G + LG G + P+ V +L E++V++S W H A T
Sbjct: 435 FGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALT 494
Query: 189 EDGKLFGWGYSADGRIGN-LGK 209
E GKLF +G G++G LGK
Sbjct: 495 ESGKLFAFGAGDQGQLGTELGK 516
Score = 111 (44.1 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 51/205 (24%), Positives = 94/205 (45%)
Query: 24 ASGTAVVSFGDGSQGALGLPT-SLTGVGGDAYEPTRVPGLPSDVTSV-----SAGHYHSL 77
A+ T ++S DG A G + GG +P P L + + ++ + G+Y +
Sbjct: 204 AARTMLIS-DDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTA 262
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEG-LDQVNVCAAFASG---VVSSA 133
++ G V+ + N+ +LG ++ A +P+ + G L+ V V A+G +++ A
Sbjct: 263 VLSREGKVYTFSWGNDGRLGH---QTEAADVEPRPLLGPLENVPV-VQIAAGYCYLLALA 318
Query: 134 IGDDG-SLWVWGKSKRGQLGLGKDITEAI--VPSRVEALAGEKIVKVSFGWGHALAQTED 190
+G S++ G G+LG G E V + + L + V + W HA +D
Sbjct: 319 CQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAW-HAAVVGQD 377
Query: 191 GKLFGWGYSADGRIGNLGKALESSP 215
G++ WG+ G +G+ + ES P
Sbjct: 378 GRVCTWGWGRYGCLGHGNEECESVP 402
Score = 98 (39.6 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 36/119 (30%), Positives = 56/119 (47%)
Query: 261 VEGVEVVDIACGFDHSLVLG--RNGV-LLSCGSNVYGQLGREKQDMGMFP--VD----IN 311
+E V VV IA G+ + L L NG+ + S G + G+LG + +P ++ +N
Sbjct: 299 LENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILN 358
Query: 312 FHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPD--NVPLVVEGL 368
P +++G H+ V G + +WGW R LG + +VP VVEGL
Sbjct: 359 LQPRVVAAGAWHAA---------VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGL 408
Score = 73 (30.8 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 29/110 (26%), Positives = 49/110 (44%)
Query: 249 EKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPV 308
EKY P + E F + ++ +A G H+ V+G++G + + G YG LG ++ P
Sbjct: 345 EKY-PRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVP- 402
Query: 309 DINFHPVSISSGLGHSLAICEVRSSNVT----GGARGIVSWGWNRSSQLG 354
+ GL H A+ V + + T + S+G S+ LG
Sbjct: 403 -------KVVEGLSHVKAV-HVATGDYTTFVVSDDGDVYSFGCGESASLG 444
Score = 47 (21.6 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 275 HSLVLGRNGVLLSCGSNVYGQLGRE 299
H+ L +G L + G+ GQLG E
Sbjct: 489 HTFALTESGKLFAFGAGDQGQLGTE 513
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 230 (86.0 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 93/360 (25%), Positives = 156/360 (43%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGD-AYEPTRVPG-LPSDVTSVSAGHYHSLAVTNNGAVW 86
++ +G+ S G LGL G+ + EP + L + V G H++ V ++G V+
Sbjct: 1 MLCWGNASFGQLGLG----GIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVY 56
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
G N+ QLG R P+ V LD N+ A + A+ D G ++ WG +
Sbjct: 57 TCGCNDLGQLGHEKARKR-----PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLA 111
Query: 147 KRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
GQLGL E I VP +++L+ +IV+V+ G+ H+LA ++ ++F WG + G++G
Sbjct: 112 TDGQLGL-PGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLG 170
Query: 206 NLGKAL--ESSP------LDSNXXXXXXXXXXXXXXXXXKA------QKLVSEGM--EKE 249
LG ++SP L A K G+ + +
Sbjct: 171 -LGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDND 229
Query: 250 KYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD 309
+Y+P + + + +VV I CG DH+ L + G + + G+ YGQLG + P
Sbjct: 230 RYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRK 287
Query: 310 INFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--VPLVVEG 367
+ F + L + ++ + I S+G + QLG N P V+G
Sbjct: 288 V-FE---LMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKG 343
Score = 157 (60.3 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 50/193 (25%), Positives = 85/193 (44%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNG 83
+ G+ V S+G G LGL + + G+P ++AG HS +T +G
Sbjct: 153 SKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLL-GIP--FAQIAAGGAHSFVLTLSG 209
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
A++ WGRN QLG R K + V++C ++A+ +G ++ +
Sbjct: 210 AIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDH---TAALTKEGGVFTF 266
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT-EDGKLFGWGYSADG 202
G GQLG E I P +V L G + +++ G H A G+++ +G +G
Sbjct: 267 GAGGYGQLGHNSTSHE-INPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNG 325
Query: 203 RIGNLGKALESSP 215
++G + SP
Sbjct: 326 QLGTGTTSNRKSP 338
Score = 157 (60.3 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 68/247 (27%), Positives = 107/247 (43%)
Query: 143 WGKSKRGQLGLGKDITEAIV--PSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
WG + GQLGLG I E IV P + + ++I V G H + +DG ++ G +
Sbjct: 4 WGNASFGQLGLG-GIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCND 62
Query: 201 DGRIGN--LGKALES-SPLDSNXXXXXXXXXXXXXXXXXKAQK----LVSEGM----EKE 249
G++G+ K E LD+ K Q L ++G E
Sbjct: 63 LGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTE 122
Query: 250 KYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR----EKQDMGM 305
+ + + + +++V +ACG+ HSL L + + S G N YGQLG +KQ+
Sbjct: 123 ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPH 182
Query: 306 FPVDINFHPVS-ISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN---V 361
+ P + I++G HS + GA I WG N+ QLG + DN V
Sbjct: 183 VIKSLLGIPFAQIAAGGAHSFVL-------TLSGA--IFGWGRNKFGQLG-LNDDNDRYV 232
Query: 362 PLVVEGL 368
P +++ L
Sbjct: 233 PTLLKSL 239
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 180 (68.4 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 56/179 (31%), Positives = 84/179 (46%)
Query: 38 GALGLPTSLTGV---GGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEV 94
G +P L+ V GG P R+P L ++V V+AG VT +G + W +
Sbjct: 312 GRPAIPPPLSSVYAWGGGLSAPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW-EAPPL 370
Query: 95 QLGRGALESRAT-WNDPKRV----EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRG 149
G GAL A P+ V EG V + + ++ + D G + +G G
Sbjct: 371 GAGGGALLPGAVEQQQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNG 430
Query: 150 QLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
LG G + + P+ VEAL G ++V+V+ G H LA + + +LF WG GR+G LG
Sbjct: 431 CLGHGS-LNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLG-LG 487
Score = 144 (55.7 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 52/201 (25%), Positives = 89/201 (44%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
+++FG GS G LG G D +PT V L ++ V+ G H LA++ ++A
Sbjct: 421 IMTFGSGSNGCLG-----HGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFA 475
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WGR + +LG G ES + G + V S ++ + G G ++
Sbjct: 476 WGRGDGGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGIDSSMILTV---PGRALACGSNR 532
Query: 148 RGQLGLGK-DITEAIVPSRV--EALA----G------EKIVKVSFGWGHALAQTEDGKLF 194
+LGL + + E P++ EAL+ G E ++ V G H+ A T G +
Sbjct: 533 FNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCY 592
Query: 195 GWGYSADGRIGNLGKALESSP 215
+G + G++G + + +P
Sbjct: 593 TFGSNQHGQLGTNARRVSRAP 613
Score = 138 (53.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 37/119 (31%), Positives = 57/119 (47%)
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALE-SRATWNDPKRVEGLDQVNVCAAFA 126
SV G HS AVT +G + +G N QLG A SRA P +V+GL + +
Sbjct: 574 SVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRA----PCQVQGLQNIKIAMVAC 629
Query: 127 SGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHAL 185
+ A+G +G ++ WGK RG+LG + P +++ + + VS G+ L
Sbjct: 630 GDAFTVAVGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDEIHPYTVTSVSCCHGNTL 688
Score = 94 (38.1 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 21/74 (28%), Positives = 40/74 (54%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM-FPVDIN-FHPVSIS 318
++ +++ +ACG ++ +G G + S G G+LGR +D G+ PV ++ HP +++
Sbjct: 619 LQNIKIAMVACGDAFTVAVGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDEIHPYTVT 678
Query: 319 S-GLGHSLAICEVR 331
S H + VR
Sbjct: 679 SVSCCHGNTLLAVR 692
Score = 91 (37.1 bits), Expect = 8.5e-16, Sum P(2) = 8.5e-16
Identities = 33/120 (27%), Positives = 54/120 (45%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD-------INFHPV 315
G E + CG D S++L G L+CGSN + +LG ++ +G P ++F P+
Sbjct: 503 GQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPL 562
Query: 316 SISSGLGH----SLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGP--DNVPLVVEGLE 369
S+ S+ + S+ VT ++G N+ QLG P V+GL+
Sbjct: 563 G-SAPFDREPLLSVDLGTAHSAAVTASG-DCYTFGSNQHGQLGTNARRVSRAPCQVQGLQ 620
Score = 83 (34.3 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 34/123 (27%), Positives = 53/123 (43%)
Query: 247 EKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF 306
E + P+ PF E + VD+ G HS + +G + GSN +GQLG + +
Sbjct: 555 EALSFTPLGSAPFDREPLLSVDL--GTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRA 612
Query: 307 PVDIN-FHPVSISSGLGHSLAICEVRSSNVTGGARG-IVSWGWNRSSQLGRMGPD-NVPL 363
P + + I+ + C + V GA G + SWG +LGR D +P
Sbjct: 613 PCQVQGLQNIKIA------MVACG-DAFTVAVGAEGEVYSWGKGARGRLGRRDEDAGLPR 665
Query: 364 VVE 366
V+
Sbjct: 666 PVQ 668
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 234 (87.4 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 87/332 (26%), Positives = 148/332 (44%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT---SVSAGHYH 75
+F + G V S G+ + G LGL S G P ++ L S V +V +G H
Sbjct: 1813 LFAVTVEGK-VYSCGEATNGRLGLGMS----SGTVPIPRQITALSSYVVKKVAVHSGGRH 1867
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+ A+T +G V++WG ++ +LG SR + P+ +E L + S+A+
Sbjct: 1868 ATALTVDGKVFSWGEGDDGKLGHF---SRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 1924
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKL 193
G L+ WG + G+LG G + T+ + P V+ L G ++++V+ G A LA T++G +
Sbjct: 1925 SSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 1983
Query: 194 FGWGYSADGRIGNLGKA-LESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGME----K 248
F WG DG G LG+ E + N + L G+ K
Sbjct: 1984 FSWG---DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2040
Query: 249 EKYMPI-------IWEPFLVEGV---EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
Y + + +P +VEG+ ++V +A G H L + +G + + G N +GQ G
Sbjct: 2041 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGN 2100
Query: 299 EKQDMGMFPV---DINFHPVS-ISSGLGHSLA 326
+ P + ++ ++ G HS+A
Sbjct: 2101 GTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132
Score = 215 (80.7 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 77/286 (26%), Positives = 127/286 (44%)
Query: 34 DGSQGALGLPTS-LTGVGG--DAYEPTRVPGLPS---DVTSVSAGHYHSLAVTNNGAVWA 87
DG A G G+GG PT + + +V++G H LA+++ G V++
Sbjct: 2777 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 2836
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG + +LG G +R+ + P+ +E L + V A G S+ + G L+ WGK +
Sbjct: 2837 WGEAEDGKLGHG---NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 2893
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKLFGWGYSADGRIG 205
G+LG D + + P VEAL G +++ ++ G G A L T+D ++ WG G++G
Sbjct: 2894 YGRLG-HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 2952
Query: 206 NLGKALESSPL--DS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPI------- 254
G P+ DS K+ + + G K Y +
Sbjct: 2953 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDH 3010
Query: 255 IWEPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+ P V+G++ V+ IA G H + +G + + G N GQLG
Sbjct: 3011 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 3056
Score = 205 (77.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 85/317 (26%), Positives = 141/317 (44%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+L+ +G ++ WG N+ QLG +E A P E L + A+
Sbjct: 2719 TLSAGGSGTIYGWGHNHRGQLG--GIEG-AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 2775
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWG--HALAQTEDGK 192
DG L+ G G+LG+G TE++ P+ +E++ I KV+ G H LA + +G+
Sbjct: 2776 ADGKLYATGYGAGGRLGIGG--TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 2833
Query: 193 LFGWGYSADGRIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEK 248
++ WG + DG++G+ ++ P ++S A L + G K
Sbjct: 2834 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG--K 2891
Query: 249 EKYMPI-------IWEPFLVEGVE---VVDIACGFD--HSLVLGRNGVLLSCGSNVYGQL 296
+Y + +P LVE ++ V+DIACG +L L + + S G YG+L
Sbjct: 2892 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 2951
Query: 297 GREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM 356
GR D P+ I+ S++ GLG C + S + + +WG +LG
Sbjct: 2952 GRGGSDGCKVPMKID----SLT-GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3006
Query: 357 GPDNV--PLVVEGLEGE 371
D+V P V+GL+G+
Sbjct: 3007 SDDHVRRPRQVQGLQGK 3023
Score = 200 (75.5 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 52/187 (27%), Positives = 94/187 (50%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVS--AGHYHSLAV 79
+A+G + ++G G G LG S D +P V L V ++ +G +L +
Sbjct: 2881 TAAGD-LYTWGKGRYGRLGHSDS-----EDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 2934
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T++ VW+WG + +LGRG + P +++ L + V S A+ G+
Sbjct: 2935 TDDDTVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLTGLGVVKVECGSQFSVALTKSGA 2991
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
++ WGK +LG G D P +V+ L G+K++ ++ G H + TEDG+++ WG +
Sbjct: 2992 VYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 3050
Query: 200 ADGRIGN 206
+G++G+
Sbjct: 3051 DEGQLGD 3057
Score = 192 (72.6 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 56/161 (34%), Positives = 81/161 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG G G D + P ++ L V V G S+A+T +GAV+
Sbjct: 2940 VWSWGDGDYGKLG-----RG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 2993
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG+ + +LG G+ + P++V+GL V A + +DG ++ WG +
Sbjct: 2994 TWGKGDYHRLGHGS-DDHV--RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 3050
Query: 147 KRGQLGLGKDITEAIV-PSRVEALAGEKIVKVSFGWGHALA 186
GQLG G T AI P V AL G+K+ +V+ G H LA
Sbjct: 3051 DEGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTLA 3089
Score = 192 (72.6 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 81/307 (26%), Positives = 133/307 (43%)
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
V+ WG N++ QLG G S+ P E L +NV A+ +G ++ G
Sbjct: 1770 VFVWGLNDKDQLG-GLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCG 1826
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFGWGYSADG 202
++ G+LGLG +P ++ AL+ + KV+ G HA A T DGK+F WG DG
Sbjct: 1827 EATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDG 1886
Query: 203 RIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYM-----P 253
++G+ + P +++ + +L + G+ + +
Sbjct: 1887 KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNT 1946
Query: 254 IIWEPFLVE---GVEVVDIACGF-D-HSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPV 308
+P +V+ G V+ +ACG D +L L G++ S G +G+LGR + P
Sbjct: 1947 TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 2006
Query: 309 DINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSS--QLGRMGPDNV--PLV 364
+I +G G C + S + G+V W W + +LG +V P V
Sbjct: 2007 NIER-----LNGQGVCQIECGAQFSLALTKS-GVV-WTWGKGDYFRLGHGSDVHVRKPQV 2059
Query: 365 VEGLEGE 371
VEGL G+
Sbjct: 2060 VEGLRGK 2066
Score = 186 (70.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 51/161 (31%), Positives = 73/161 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V S+GDG G LG G P + L V + G SLA+T +G VW
Sbjct: 1983 VFSWGDGDFGKLG-----RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 2037
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG+ + +LG G S P+ VEGL + + A+ D G ++ WG +
Sbjct: 2038 WGKGDYFRLGHG---SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDND 2094
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT 188
GQ G G P+ V+ L G+KI +V+ G H++A T
Sbjct: 2095 HGQQGNGTTTVNR-KPTLVQGLEGQKITRVACGSSHSVAWT 2134
Score = 163 (62.4 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 54/189 (28%), Positives = 89/189 (47%)
Query: 23 SASGTAVV-SFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAV 79
SA G+ + +G +G LG G+ G + PT L + + G AV
Sbjct: 2721 SAGGSGTIYGWGHNHRGQLG------GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV 2774
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--CAAFASGVVSSAIGDD 137
T +G ++A G +LG G ES +T P +E + V + A + G A+ +
Sbjct: 2775 TADGKLYATGYGAGGRLGIGGTESVST---PTLLESIQHVFIKKVAVNSGGKHCLALSSE 2831
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG+++ G+LG G + P +E+L G ++V V+ G H+ T G L+ WG
Sbjct: 2832 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 2890
Query: 198 YSADGRIGN 206
GR+G+
Sbjct: 2891 KGRYGRLGH 2899
Score = 155 (59.6 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVC 122
+V V+ G AVT G V++ G +LG G S T P+++ L V
Sbjct: 1802 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGM--SSGTVPIPRQITALSSYVVKKV 1859
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
A + G ++A+ DG ++ WG+ G+LG + P +EAL ++I ++ G
Sbjct: 1860 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSS 1918
Query: 183 HALAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
H+ A T G+L+ WG GR+G+ + P
Sbjct: 1919 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKP 1951
Score = 86 (35.3 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 34/118 (28%), Positives = 52/118 (44%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSG 320
+ G V I CG SL L ++GV+ + G Y +LG D++ + G
Sbjct: 2011 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEG 2062
Query: 321 L-GHSL---AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
L G + A+ + VT + + +WG N Q G G V P +V+GLEG+
Sbjct: 2063 LRGKKIVHVAVGALHCLAVTDSGQ-VYAWGDNDHGQQGN-GTTTVNRKPTLVQGLEGQ 2118
Score = 79 (32.9 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 31/116 (26%), Positives = 49/116 (42%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVSIS 318
G+ VV + CG S+ L ++G + + G Y +LG D P + ++I+
Sbjct: 2970 GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 3029
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
+G H +C V +WG N QLG G N P +V L+G+
Sbjct: 3030 TGSLH--CVCCTEDGEV-------YTWGDNDEGQLGD-GTTNAIQRPRLVAALQGK 3075
Score = 43 (20.2 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 274 DHSLVLGRNGVLLSCGSNVYGQLG 297
D +L G +G + G N GQLG
Sbjct: 2717 DWTLSAGGSGTIYGWGHNHRGQLG 2740
Score = 38 (18.4 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 261 VEGVEVVDIACGFDHSL 277
++G +V +ACG H+L
Sbjct: 3072 LQGKKVNRVACGSAHTL 3088
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 234 (87.4 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 87/332 (26%), Positives = 148/332 (44%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT---SVSAGHYH 75
+F + G V S G+ + G LGL S G P ++ L S V +V +G H
Sbjct: 1813 LFAVTVEGK-VYSCGEATNGRLGLGMS----SGTVPIPRQITALSSYVVKKVAVHSGGRH 1867
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+ A+T +G V++WG ++ +LG SR + P+ +E L + S+A+
Sbjct: 1868 ATALTVDGKVFSWGEGDDGKLGHF---SRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 1924
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKL 193
G L+ WG + G+LG G + T+ + P V+ L G ++++V+ G A LA T++G +
Sbjct: 1925 SSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 1983
Query: 194 FGWGYSADGRIGNLGKA-LESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGME----K 248
F WG DG G LG+ E + N + L G+ K
Sbjct: 1984 FSWG---DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2040
Query: 249 EKYMPI-------IWEPFLVEGV---EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
Y + + +P +VEG+ ++V +A G H L + +G + + G N +GQ G
Sbjct: 2041 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGN 2100
Query: 299 EKQDMGMFPV---DINFHPVS-ISSGLGHSLA 326
+ P + ++ ++ G HS+A
Sbjct: 2101 GTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132
Score = 215 (80.7 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 77/286 (26%), Positives = 127/286 (44%)
Query: 34 DGSQGALGLPTS-LTGVGG--DAYEPTRVPGLPS---DVTSVSAGHYHSLAVTNNGAVWA 87
DG A G G+GG PT + + +V++G H LA+++ G V++
Sbjct: 2813 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 2872
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG + +LG G +R+ + P+ +E L + V A G S+ + G L+ WGK +
Sbjct: 2873 WGEAEDGKLGHG---NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 2929
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQTEDGKLFGWGYSADGRIG 205
G+LG D + + P VEAL G +++ ++ G G A L T+D ++ WG G++G
Sbjct: 2930 YGRLG-HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 2988
Query: 206 NLGKALESSPL--DS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPI------- 254
G P+ DS K+ + + G K Y +
Sbjct: 2989 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDH 3046
Query: 255 IWEPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+ P V+G++ V+ IA G H + +G + + G N GQLG
Sbjct: 3047 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 3092
Score = 205 (77.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 85/317 (26%), Positives = 141/317 (44%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+L+ +G ++ WG N+ QLG +E A P E L + A+
Sbjct: 2755 TLSAGGSGTIYGWGHNHRGQLG--GIEG-AKVKVPTPCEALATLRPVQLIGGEQTLFAVT 2811
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWG--HALAQTEDGK 192
DG L+ G G+LG+G TE++ P+ +E++ I KV+ G H LA + +G+
Sbjct: 2812 ADGKLYATGYGAGGRLGIGG--TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 2869
Query: 193 LFGWGYSADGRIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEK 248
++ WG + DG++G+ ++ P ++S A L + G K
Sbjct: 2870 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG--K 2927
Query: 249 EKYMPI-------IWEPFLVEGVE---VVDIACGFD--HSLVLGRNGVLLSCGSNVYGQL 296
+Y + +P LVE ++ V+DIACG +L L + + S G YG+L
Sbjct: 2928 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 2987
Query: 297 GREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM 356
GR D P+ I+ S++ GLG C + S + + +WG +LG
Sbjct: 2988 GRGGSDGCKVPMKID----SLT-GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3042
Query: 357 GPDNV--PLVVEGLEGE 371
D+V P V+GL+G+
Sbjct: 3043 SDDHVRRPRQVQGLQGK 3059
Score = 200 (75.5 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 52/187 (27%), Positives = 94/187 (50%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVS--AGHYHSLAV 79
+A+G + ++G G G LG S D +P V L V ++ +G +L +
Sbjct: 2917 TAAGD-LYTWGKGRYGRLGHSDS-----EDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 2970
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T++ VW+WG + +LGRG + P +++ L + V S A+ G+
Sbjct: 2971 TDDDTVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLTGLGVVKVECGSQFSVALTKSGA 3027
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
++ WGK +LG G D P +V+ L G+K++ ++ G H + TEDG+++ WG +
Sbjct: 3028 VYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 3086
Query: 200 ADGRIGN 206
+G++G+
Sbjct: 3087 DEGQLGD 3093
Score = 192 (72.6 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 56/161 (34%), Positives = 81/161 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG G G D + P ++ L V V G S+A+T +GAV+
Sbjct: 2976 VWSWGDGDYGKLG-----RG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 3029
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG+ + +LG G+ + P++V+GL V A + +DG ++ WG +
Sbjct: 3030 TWGKGDYHRLGHGS-DDHV--RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 3086
Query: 147 KRGQLGLGKDITEAIV-PSRVEALAGEKIVKVSFGWGHALA 186
GQLG G T AI P V AL G+K+ +V+ G H LA
Sbjct: 3087 DEGQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTLA 3125
Score = 192 (72.6 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 81/307 (26%), Positives = 133/307 (43%)
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
V+ WG N++ QLG G S+ P E L +NV A+ +G ++ G
Sbjct: 1770 VFVWGLNDKDQLG-GLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCG 1826
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFGWGYSADG 202
++ G+LGLG +P ++ AL+ + KV+ G HA A T DGK+F WG DG
Sbjct: 1827 EATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDG 1886
Query: 203 RIGNLGKALESSP--LDS--NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYM-----P 253
++G+ + P +++ + +L + G+ + +
Sbjct: 1887 KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNT 1946
Query: 254 IIWEPFLVE---GVEVVDIACGF-D-HSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPV 308
+P +V+ G V+ +ACG D +L L G++ S G +G+LGR + P
Sbjct: 1947 TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 2006
Query: 309 DINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSS--QLGRMGPDNV--PLV 364
+I +G G C + S + G+V W W + +LG +V P V
Sbjct: 2007 NIER-----LNGQGVCQIECGAQFSLALTKS-GVV-WTWGKGDYFRLGHGSDVHVRKPQV 2059
Query: 365 VEGLEGE 371
VEGL G+
Sbjct: 2060 VEGLRGK 2066
Score = 186 (70.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 51/161 (31%), Positives = 73/161 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
V S+GDG G LG G P + L V + G SLA+T +G VW
Sbjct: 1983 VFSWGDGDFGKLG-----RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 2037
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG+ + +LG G S P+ VEGL + + A+ D G ++ WG +
Sbjct: 2038 WGKGDYFRLGHG---SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDND 2094
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT 188
GQ G G P+ V+ L G+KI +V+ G H++A T
Sbjct: 2095 HGQQGNGTTTVNR-KPTLVQGLEGQKITRVACGSSHSVAWT 2134
Score = 163 (62.4 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 54/189 (28%), Positives = 89/189 (47%)
Query: 23 SASGTAVV-SFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPS-DVTSVSAGHYHSLAV 79
SA G+ + +G +G LG G+ G + PT L + + G AV
Sbjct: 2757 SAGGSGTIYGWGHNHRGQLG------GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAV 2810
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--CAAFASGVVSSAIGDD 137
T +G ++A G +LG G ES +T P +E + V + A + G A+ +
Sbjct: 2811 TADGKLYATGYGAGGRLGIGGTESVST---PTLLESIQHVFIKKVAVNSGGKHCLALSSE 2867
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG+++ G+LG G + P +E+L G ++V V+ G H+ T G L+ WG
Sbjct: 2868 GEVYSWGEAEDGKLGHGNR-SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWG 2926
Query: 198 YSADGRIGN 206
GR+G+
Sbjct: 2927 KGRYGRLGH 2935
Score = 155 (59.6 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVC 122
+V V+ G AVT G V++ G +LG G S T P+++ L V
Sbjct: 1802 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGM--SSGTVPIPRQITALSSYVVKKV 1859
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
A + G ++A+ DG ++ WG+ G+LG + P +EAL ++I ++ G
Sbjct: 1860 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSS 1918
Query: 183 HALAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
H+ A T G+L+ WG GR+G+ + P
Sbjct: 1919 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKP 1951
Score = 86 (35.3 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 34/118 (28%), Positives = 52/118 (44%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSG 320
+ G V I CG SL L ++GV+ + G Y +LG D++ + G
Sbjct: 2011 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS--------DVHVRKPQVVEG 2062
Query: 321 L-GHSL---AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
L G + A+ + VT + + +WG N Q G G V P +V+GLEG+
Sbjct: 2063 LRGKKIVHVAVGALHCLAVTDSGQ-VYAWGDNDHGQQGN-GTTTVNRKPTLVQGLEGQ 2118
Score = 79 (32.9 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 31/116 (26%), Positives = 49/116 (42%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVSIS 318
G+ VV + CG S+ L ++G + + G Y +LG D P + ++I+
Sbjct: 3006 GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 3065
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV---PLVVEGLEGE 371
+G H +C V +WG N QLG G N P +V L+G+
Sbjct: 3066 TGSLH--CVCCTEDGEV-------YTWGDNDEGQLGD-GTTNAIQRPRLVAALQGK 3111
Score = 43 (20.2 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 274 DHSLVLGRNGVLLSCGSNVYGQLG 297
D +L G +G + G N GQLG
Sbjct: 2753 DWTLSAGGSGTIYGWGHNHRGQLG 2776
Score = 38 (18.4 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 261 VEGVEVVDIACGFDHSL 277
++G +V +ACG H+L
Sbjct: 3108 LQGKKVNRVACGSAHTL 3124
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 226 (84.6 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 62/184 (33%), Positives = 96/184 (52%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSA-GHYHSLAVTNNGAVWAWGR 90
FG G LGL + T +PT V L + T ++ G H+L T G V+A G
Sbjct: 61 FGSNDWGQLGLGSKNT-----VRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGG 115
Query: 91 NNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQ 150
N+E QLG G E R T++ ++ AA S+A+ +DG L+VWG + GQ
Sbjct: 116 NSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAA--GSYTSAAVTEDGQLFVWGDNSEGQ 173
Query: 151 LGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKA 210
+GL D T VP +V+ G+ + +S G+ H+ T DG+L+ +G +G++G L +
Sbjct: 174 IGLA-DKTCVSVPCQVDV--GKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQ 230
Query: 211 LESS 214
L++S
Sbjct: 231 LKNS 234
Score = 199 (75.1 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 80/305 (26%), Positives = 134/305 (43%)
Query: 69 VSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASG 128
+S G H+ VT NG ++ +G N+ QLG G S+ T P V+ L A
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLG---SKNTVRKPTCVKALKPEKTKLAVCGR 98
Query: 129 VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGE-KIVKVSFGWGHALAQ 187
+ + G+++ G + GQLGLG D E + + KI +++ G + A
Sbjct: 99 NHTLVYTEKGNVYAAGGNSEGQLGLG-DTEERTTFHLISFFTNQHKIKQLAAGSYTSAAV 157
Query: 188 TEDGKLFGWGYSADGRIGNLGKALESSP--LDSNXXXXXXXXXXXXXXXXXKAQKLVSEG 245
TEDG+LF WG +++G+IG K S P +D +L + G
Sbjct: 158 TEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSISCGYYHSAFITGDGELYTFG 217
Query: 246 MEKEKYMPIIWE-------PFLVEGV--EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQL 296
+ + ++ E P V G+ +V +ACG +H++VL GV + G YGQL
Sbjct: 218 EPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETGVY-TFGLGQYGQL 276
Query: 297 GREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIV-SWGWNRSSQLGR 355
G +F + + S H++ E ++ + G++ ++G R +LG
Sbjct: 277 GHGTL---LFKTSVPKSVKHLRSHKIHNVTCGESHTAVIADTENGLMFTFGDGRHGKLG- 332
Query: 356 MGPDN 360
+G +N
Sbjct: 333 LGEEN 337
Score = 156 (60.0 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 56/185 (30%), Positives = 91/185 (49%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP-----SDVTSVSAGHYHSLAVTNNG 83
V + G S+G LGL GD E T + + ++AG Y S AVT +G
Sbjct: 110 VYAAGGNSEGQLGL--------GDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDG 161
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSA-IGDDGSLWV 142
++ WG N+E Q+G L + + P +V D ++ + G SA I DG L+
Sbjct: 162 QLFVWGDNSEGQIG---LADKTCVSVPCQV---DVGKPVSSISCGYYHSAFITGDGELYT 215
Query: 143 WGKSKRGQLGL-GKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD 201
+G+ + G+LGL + + + VP V + EK+ KV+ G H + TE G ++ +G
Sbjct: 216 FGEPENGKLGLLPEQLKNSRVPQPVLGIM-EKVNKVACGGEHTVVLTETG-VYTFGLGQY 273
Query: 202 GRIGN 206
G++G+
Sbjct: 274 GQLGH 278
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 188 (71.2 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 58/187 (31%), Positives = 88/187 (47%)
Query: 29 VVSFGDG-SQGALGLPTSLTGVGGDAYEPTRVP-GLPS----DVTSVSAGHYHSLAVTNN 82
V +G+G +G LG G D + +P L S DV +++ G H++ VT
Sbjct: 267 VFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQ 326
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWV 142
G ++WG +E +LG G ++S PK ++ L+ N+ S A+ G L+
Sbjct: 327 GESFSWGEESEGRLGHG-VDSNI--QQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYT 383
Query: 143 WGKSKRGQLGLGKDITEAIVPSRVE-ALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD 201
WGK G LG G +++ VP RV L G + ++ G H T G+LF +G D
Sbjct: 384 WGKGDFGVLGHGNEVSHW-VPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFG---D 439
Query: 202 GRIGNLG 208
G G LG
Sbjct: 440 GTFGVLG 446
Score = 152 (58.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 62/251 (24%), Positives = 108/251 (43%)
Query: 142 VWGKSKRGQLGLGKDIT-EAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
V G R ++G DI ++++P +E+ + ++ G HA+ T+ G+ F WG +
Sbjct: 278 VLGGGNR-RVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEES 336
Query: 201 DGRIGN----------LGKALESSPLD---SNXXXXXXXXXXXXXXXXXKAQ-KLVSEGM 246
+GR+G+ L AL ++ ++ K ++ G
Sbjct: 337 EGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGN 396
Query: 247 EKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF 306
E ++P FL+EG+ V IACG H+ V+ G L + G +G LG +
Sbjct: 397 EVSHWVPKRVN-FLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFI 455
Query: 307 PVDIN----FHPVSISSGLGHSLAICEVR--SSNVTGGARG-IVSWGWNRSSQLGRMG-- 357
P +++ V + G+ H+ A+ EV SS+ + + G + +WG +LG
Sbjct: 456 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKE 515
Query: 358 PDNVPLVVEGL 368
P VP V L
Sbjct: 516 PKLVPTCVAAL 526
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VTSVSAGHYHSLAVTNNGAVWAW 88
++G G G LG ++ + P RV L V+S++ G YH+ VT+ G ++ +
Sbjct: 383 TWGKGDFGVLGHGNEVSH-----WVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTF 437
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNV-CAAF-ASGVVSSAIGDD-------GS 139
G LG G +S + ++GL V C + + VV +G G
Sbjct: 438 GDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 497
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
L+ WG +G+LG G + +VP+ V AL +V+ G +A T G ++ G
Sbjct: 498 LFTWGDGDKGRLGHGNKEPK-LVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSP 556
Query: 200 ADGRIGN 206
G++GN
Sbjct: 557 VYGQLGN 563
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 48/171 (28%), Positives = 76/171 (44%)
Query: 12 VNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVS 70
V V+ + S + ++GDG +G LG G PT V L + V+
Sbjct: 481 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLG-----HGNKEPKLVPTCVAALVEPNFCQVA 535
Query: 71 AGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVV 130
GH ++A+T +G V+ G QLG S A P RVEG + A G
Sbjct: 536 CGHSLTVALTTSGHVYTMGSPVYGQLGN----SHADGKTPNRVEGKLHKSFVEEIACGAY 591
Query: 131 SSAIGDDGS-LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFG 180
A+ + ++ WGK G+LG G D+ + P+ VE+L +++ ++ G
Sbjct: 592 HVAVLTSRTEVYTWGKGSNGRLGHG-DVDDRNSPTLVESLKDKQVKSIACG 641
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 61/224 (27%), Positives = 95/224 (42%)
Query: 8 VHNHVNVLTSRIFMRS-ASG---TAVVS-------FGDGSQGALGLPTSLTGVGGDAYEP 56
V VN L I + S A G TAVV+ FGDG+ G LG G + P
Sbjct: 402 VPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLG-----HGDKKSVFIP 456
Query: 57 TRVPGLPSDVTSVSA-GHYHSLAVT------------NNGAVWAWGRNNEVQLGRGALES 103
V L T +A G +H+ AV ++G ++ WG ++ +LG G E
Sbjct: 457 REVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEP 516
Query: 104 RATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVP 163
+ P V L + N C ++ A+ G ++ G GQLG + P
Sbjct: 517 KLV---PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG--NSHADGKTP 571
Query: 164 SRVEALAGEKIVK-VSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
+RVE + V+ ++ G H T +++ WG ++GR+G+
Sbjct: 572 NRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGH 615
Score = 89 (36.4 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 36/130 (27%), Positives = 54/130 (41%)
Query: 242 VSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQ 301
+ G ++ K +P LVE +ACG ++ L +G + + GS VYGQLG
Sbjct: 509 LGHGNKEPKLVPTCVAA-LVEP-NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHA 566
Query: 302 DMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPD-- 359
D G P N + +A C V + +WG + +LG D
Sbjct: 567 D-GKTP---NRVEGKLHKSFVEEIA-CGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDR 621
Query: 360 NVPLVVEGLE 369
N P +VE L+
Sbjct: 622 NSPTLVESLK 631
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 185 (70.2 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 57/190 (30%), Positives = 87/190 (45%)
Query: 35 GSQGALGLPTSLTGV---GGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRN 91
G G+P L+ + G P R+P L ++V VSAG VT +G + W
Sbjct: 306 GGSARTGIPPPLSSIYTWGSGITTPLRLPMLNTEVVQVSAGRTQKAGVTKSGRLIMWEAP 365
Query: 92 NEVQLGRGALESRATWNDPKRV----EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
G +L P+ V EG V + + ++ + D G + +G
Sbjct: 366 PMGTAGGPSLPGATEQLQPQFVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGS 425
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNL 207
G LG G + T+ P VEAL G ++V+V+ G H LA + + ++F WG +GR+G L
Sbjct: 426 NGCLGHG-NFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLG-L 483
Query: 208 GKALE--SSP 215
G LE +SP
Sbjct: 484 G-TLECHNSP 492
Score = 146 (56.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 56/193 (29%), Positives = 89/193 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
+++FG GS G LG G D +P V L ++ V+ G H LAV+N V+A
Sbjct: 418 IMTFGSGSNGCLG-----HGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNEREVFA 472
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGD-DGSLWVWGKS 146
WGR + +LG G LE N P++V + + G+ SS + + + G +
Sbjct: 473 WGRGDNGRLGLGTLECH---NSPQQV-AVPPEHEAQRVICGIDSSMVLTVNNQILACGSN 528
Query: 147 KRGQLGLGKDITEAIVPS---RVEA-----------LAGEKIVKVSFGWGHALAQTEDGK 192
+ +LGL + I+ A PS +VE L E +V G H+ A T G+
Sbjct: 529 RCNKLGLDR-ISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQ 587
Query: 193 LFGWGYSADGRIG 205
+ +G + G++G
Sbjct: 588 CYTFGSNQHGQLG 600
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 36/120 (30%), Positives = 51/120 (42%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V G HS AVT +G + +G N QLG + + P V GL + V
Sbjct: 569 VVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRV---PHLVVGLRAMKVTVVA 625
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHAL 185
+ AIG DG + WGK RG+LG + T P ++E + V+ G+ L
Sbjct: 626 CGDAFTVAIGADGEVCTWGKGARGRLGRKDEETGMPRPVQLEETHPYVVTSVACCHGNTL 685
Score = 119 (46.9 bits), Expect = 0.00055, P = 0.00055
Identities = 51/188 (27%), Positives = 78/188 (41%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V ++G G G LGL T ++ + VP + V G S+ +T N + A
Sbjct: 470 VFAWGRGDNGRLGLGTLECH---NSPQQVAVPP-EHEAQRVICGIDSSMVLTVNNQILAC 525
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEG-----------LDQVNVCAAFASGVVSSAIGDD 137
G N +LG + S + +VE L+Q V A S+A+
Sbjct: 526 GSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTAS 585
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G + +G ++ GQLG + VP V L K+ V+ G +A DG++ WG
Sbjct: 586 GQCYTFGSNQHGQLGTNS-CRNSRVPHLVVGLRAMKVTVVACGDAFTVAIGADGEVCTWG 644
Query: 198 YSADGRIG 205
A GR+G
Sbjct: 645 KGARGRLG 652
Score = 87 (35.7 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 258 PFLVEGV---EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM-FPVDIN-F 312
P LV G+ +V +ACG ++ +G +G + + G G+LGR+ ++ GM PV +
Sbjct: 610 PHLVVGLRAMKVTVVACGDAFTVAIGADGEVCTWGKGARGRLGRKDEETGMPRPVQLEET 669
Query: 313 HPVSISS 319
HP ++S
Sbjct: 670 HPYVVTS 676
Score = 84 (34.6 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 33/116 (28%), Positives = 50/116 (43%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPV------DINFHPVSIS 318
E + CG D S+VL N +L+CGSN +LG ++ P + + S
Sbjct: 502 EAQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQS 561
Query: 319 SGLGHSLAICE----VRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--VPLVVEGL 368
+ L +C S+ VT + ++G N+ QLG N VP +V GL
Sbjct: 562 APLNQEPVVCADIGTAHSAAVTASGQ-CYTFGSNQHGQLGTNSCRNSRVPHLVVGL 616
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 180 (68.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 50/162 (30%), Positives = 78/162 (48%)
Query: 50 GGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGR----GALESRA 105
G P R+P L ++V VS G + VT +G + W + V G GA+E
Sbjct: 326 GSGISTPLRLPMLNTEVIQVSLGRTQKMGVTKSGRLITWEAPS-VGSGEPTLPGAVEQMQ 384
Query: 106 TWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGK--DITEAIVP 163
+ +EG V + + + ++ + D G + +G G LG G D+T+ P
Sbjct: 385 PQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQ---P 441
Query: 164 SRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
VEAL G ++V+VS G H LA T + ++F WG +GR+G
Sbjct: 442 KIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLG 483
Score = 152 (58.6 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 60/193 (31%), Positives = 88/193 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
+++FG GS G LG G D +P V L ++ VS G H LAVTN V++
Sbjct: 419 IMTFGSGSNGCLG-----HGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFS 473
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI-GDDGSLWVWGKS 146
WGR + +LG +S N P++V L GV S I + G +
Sbjct: 474 WGRGDNGRLGLATQDSH---NCPQQVS-LPADFEAQRVLCGVDCSMIMSTQHQILACGNN 529
Query: 147 KRGQLGLGKDITEAIVPS---RVEA-----------LAGEKIVKVSFGWGHALAQTEDGK 192
+ +LGL K ++ PS +VE L EKIV + G H++A TE G+
Sbjct: 530 RFNKLGLDK-VSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQ 588
Query: 193 LFGWGYSADGRIG 205
F +G + G++G
Sbjct: 589 CFTFGSNQHGQLG 601
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 29/87 (33%), Positives = 43/87 (49%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
+ + G HS+AVT G + +G N QLG R + P +V GL + + A
Sbjct: 570 IVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLG---CSHRRSSRVPYQVSGLQGITMAAC- 625
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLG 152
+ AIG +G ++ WGK RG+LG
Sbjct: 626 -GDAFTLAIGAEGEVYTWGKGARGRLG 651
Score = 89 (36.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 20/65 (30%), Positives = 39/65 (60%)
Query: 258 PFLVEGVEVVDIA-CGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM-FPVDIN-FHP 314
P+ V G++ + +A CG +L +G G + + G G+LGR+++D G+ PV ++ H
Sbjct: 611 PYQVSGLQGITMAACGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDFGIPKPVQLDESHA 670
Query: 315 VSISS 319
+++S
Sbjct: 671 FTVTS 675
Score = 89 (36.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 31/111 (27%), Positives = 47/111 (42%)
Query: 258 PFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSI 317
P E + +DI G HS+ + G + GSN +GQLG + P +
Sbjct: 564 PLNTEKIVYIDI--GTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQV------- 614
Query: 318 SSGL-GHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPD-NVPLVVE 366
SGL G ++A C + G + +WG +LGR D +P V+
Sbjct: 615 -SGLQGITMAACGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDFGIPKPVQ 664
Score = 79 (32.9 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 29/117 (24%), Positives = 57/117 (48%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREK----QDMGMF-PVD-INFHPVSIS 318
E + CG D S+++ +L+CG+N + +LG +K ++ F V+ ++ + S
Sbjct: 503 EAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQS 562
Query: 319 SGLG-HSLAICEVRSSN-VTGGARG-IVSWGWNRSSQLG--RMGPDNVPLVVEGLEG 370
+ L + ++ +++ V +G ++G N+ QLG VP V GL+G
Sbjct: 563 APLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQG 619
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 206 (77.6 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 63/175 (36%), Positives = 86/175 (49%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG-LPSDVT-SVSAGHYHSLAVTNNGAVW 86
V S+GDG G LG S T Y P + G L V VSAG+ HS AVT +G ++
Sbjct: 479 VFSWGDGDYGKLGHGNSST----QKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG-SLWVWGK 145
WG + +LG G SR N P V+ + V + +S + A+ DG ++W +G
Sbjct: 534 TWGEGDFGRLGHGDSNSR---NIPTLVKDISNVGEVSCGSSHTI--ALSKDGRTVWSFGG 588
Query: 146 SKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
G+LG G D P +EAL G I KV G +LA T G+++ WG A
Sbjct: 589 GDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Score = 201 (75.8 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 59/208 (28%), Positives = 101/208 (48%)
Query: 2 RLLKSVVHNHVNVLTSRIFMRSASGTA---VVSFGDGSQGALGLPTSLTGVGGDAYEPTR 58
+L++ + V V S + SA+ T + ++G+G G LG G PT
Sbjct: 502 KLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG-----HGDSNSRNIPTL 556
Query: 59 VPGLPSDVTSVSAGHYHSLAVTNNG-AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLD 117
V + S+V VS G H++A++ +G VW++G + +LG G ++ + PK +E L
Sbjct: 557 VKDI-SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHG--DTNRVYK-PKVIEALQ 612
Query: 118 QVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
+ + A S A+ G ++ WG LG G A+ P +E LA +IV +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDI 670
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRIG 205
S G H L+ + D +++ WG ++ G+ G
Sbjct: 671 SIGDSHCLSLSHDNEVYAWGNNSMGQCG 698
Score = 192 (72.6 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 59/191 (30%), Positives = 101/191 (52%)
Query: 20 FMRSASGTAVVSFGDGSQGALGLPTS--LTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSL 77
F+ S G+ V + G GS G LGL S + + +EP R V+S H+L
Sbjct: 416 FVISTDGS-VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSI---KKVSSSKGSDGHTL 471
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVV-SSAIGD 136
A T G V++WG + +LG G + +T PK ++G Q V ++G S+A+ +
Sbjct: 472 AFTTEGEVFSWGDGDYGKLGHG---NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 137 DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGK-LFG 195
DG L+ WG+ G+LG G D +P+ V+ ++ + +VS G H +A ++DG+ ++
Sbjct: 529 DGELYTWGEGDFGRLGHG-DSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWS 585
Query: 196 WGYSADGRIGN 206
+G +G++G+
Sbjct: 586 FGGGDNGKLGH 596
Score = 183 (69.5 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 60/199 (30%), Positives = 85/199 (42%)
Query: 3 LLKSVVH-NHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG 61
L+K + + V+ +S S G V SFG G G LG G Y+P +
Sbjct: 556 LVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG-----HGDTNRVYKPKVIEA 610
Query: 62 LPSD-VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVN 120
L + V AG SLA+T+ G V+AWG LG G+ S AT PK +E L
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGS--SEATALRPKLIEELAATR 666
Query: 121 VCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFG 180
+ ++ D ++ WG + GQ G G P +V L G I ++S G
Sbjct: 667 IVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726
Query: 181 WGHALAQT---EDGKLFGW 196
H+LA T D ++ W
Sbjct: 727 TSHSLAWTALPRDRQVVAW 745
Score = 175 (66.7 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 45/153 (29%), Positives = 77/153 (50%)
Query: 55 EPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
+P P SD ++ AG Y + ++ +G+V A G+ + +LG G +++T
Sbjct: 395 QPKLAPSF-SDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEP 453
Query: 115 GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA-LAGEK 173
V ++ S + A +G ++ WG G+LG G T+ P ++ L G+
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKV 512
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
+V VS G+ H+ A TEDG+L+ WG GR+G+
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Score = 123 (48.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 43/138 (31%), Positives = 56/138 (40%)
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG 138
V+ V+ WG N+ QL G E PK A + I DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKIL---QPKLAPSFSDAQTIEA--GQYCTFVISTDG 422
Query: 139 SLWVWGKSKRGQLGLGKDITEAIVPSRV-EALAGEKIVKVSFGW-GHALAQTEDGKLFGW 196
S+ GK G+LGLG ++ + E K V S G GH LA T +G++F W
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 197 GYSADGRIGNLGKALESS 214
G DG G LG S+
Sbjct: 483 G---DGDYGKLGHGNSST 497
Score = 99 (39.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 36/136 (26%), Positives = 63/136 (46%)
Query: 240 KLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
KL +KY +I P ++G VV ++ G+ HS + +G L + G +G+LG
Sbjct: 489 KLGHGNSSTQKYPKLIQGP--LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 300 KQDMGMFPV---DINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM 356
+ P DI+ + +S G H++A+ + R + S+G + +LG
Sbjct: 547 DSNSRNIPTLVKDIS-NVGEVSCGSSHTIALSK--------DGRTVWSFGGGDNGKLGHG 597
Query: 357 GPDNV--PLVVEGLEG 370
+ V P V+E L+G
Sbjct: 598 DTNRVYKPKVIEALQG 613
Score = 65 (27.9 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 25/81 (30%), Positives = 37/81 (45%)
Query: 258 PFLVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG---------REKQDMGM 305
P L+E +VDI+ G H L L + + + G+N GQ G + K+ G+
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGL 715
Query: 306 FPVDINFHPVSISSGLGHSLA 326
+ I IS+G HSLA
Sbjct: 716 DGIAIQ----QISAGTSHSLA 732
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 188 (71.2 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 55/181 (30%), Positives = 95/181 (52%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V++ G G G LGL S+ + +P VP L DV AG H++ ++ +G V+++
Sbjct: 37 VLTLGQGDVGQLGLGESVL----ERKKPALVP-LLQDVVQAEAGGMHTVCLSQSGQVYSF 91
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG--KS 146
G N+E LGR + P +VE L Q V A ++A+ +DG +++WG +
Sbjct: 92 GCNDEGALGRDT-SVEGSEMVPGKVE-L-QEKVVQVSAGDSHTAALTEDGRVFLWGSFRD 148
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
G +GL + + +++VP +V+ ++VKV+ G H + T DG L+ G G++G
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQL--DTQVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGR 206
Query: 207 L 207
+
Sbjct: 207 V 207
Score = 134 (52.2 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 46/131 (35%), Positives = 64/131 (48%)
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T G V G+ + QLG G ES P V L +V A A G+ + + G
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG--ESVLERKKPALVPLLQ--DVVQAEAGGMHTVCLSQSGQ 87
Query: 140 LWVWGKSKRGQLGLGKDITEA-IVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGY 198
++ +G + G LG + + +VP +VE EK+V+VS G H A TEDG++F WG
Sbjct: 88 VYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKVVQVSAGDSHTAALTEDGRVFLWGS 145
Query: 199 SAD--GRIGNL 207
D G IG L
Sbjct: 146 FRDNNGVIGLL 156
Score = 127 (49.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 54/214 (25%), Positives = 94/214 (43%)
Query: 19 IFMRSASGTAVVSFGDGSQGALG-LPTSLTGVGG-DAYEPTRVP--------GLPSDVTS 68
+ M + G + + G G QG LG +P GG E VP G V
Sbjct: 184 LVMLTTDGD-LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRF 242
Query: 69 VSA--GHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL-DQVNVCAAF 125
A G Y + A++ G V+ +G +N QLG S P+ + + F
Sbjct: 243 QDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFI---PQNLTSFKNSTKSWVGF 299
Query: 126 ASGVVSSAIGD-DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
+ G + D +G + G+++ G+LGLG+ E +P+ + L V G+A
Sbjct: 300 SGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYA 359
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGKALES-SPLD 217
+++ DG++F WG + ++G G+ ++ SP++
Sbjct: 360 VSK--DGRVFAWGMGTNYQLGT-GQEDDAWSPVE 390
Score = 68 (29.0 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 20/84 (23%), Positives = 42/84 (50%)
Query: 258 PFLVEGVEVVD-IACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI------ 310
P L+ + VV +ACG + ++G + + G QLG ++D PV++
Sbjct: 338 PTLISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQEDDAWSPVEMTGKQLE 397
Query: 311 NFHPVSISSGLGHSLAICEVRSSN 334
N +++SSG H++ + + ++ +
Sbjct: 398 NREVLTVSSGGQHTVLLVKDKTQS 421
Score = 62 (26.9 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 29/109 (26%), Positives = 46/109 (42%)
Query: 267 VDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR-EKQDMGMFPVDINFHPVSISSGLGHSL 325
V + G H++ + G S G YG+LG E + P I+ PV S G S+
Sbjct: 297 VGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASV 356
Query: 326 AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEGES 372
V+ R + +WG + QLG D+ P+ + G + E+
Sbjct: 357 GYA------VSKDGR-VFAWGMGTNYQLGTGQEDDAWSPVEMTGKQLEN 398
Score = 50 (22.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 16/61 (26%), Positives = 23/61 (37%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGH 323
V D CG + + R G + G + Y QLG P ++ S S +G
Sbjct: 240 VRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGF 299
Query: 324 S 324
S
Sbjct: 300 S 300
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 170 (64.9 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 53/179 (29%), Positives = 82/179 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPT--RVPGLPSDVTSVSAGHYHSLAVTNNGAVW 86
V S+G G+ G LG T L D P + LPS ++ ++ G H +A+T+ G V+
Sbjct: 17 VWSWGAGTDGQLGT-TKLQ----DELLPQLLSLTSLPS-ISMLACGGAHVIALTSGGKVF 70
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WGR + QLG G + + PK V D + A A S + D G ++ G
Sbjct: 71 TWGRGSSGQLGHGDILNITL---PKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNG 127
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
GQLG G D P++V + + V+ G H+L ++ G+G G++G
Sbjct: 128 SFGQLGHG-DTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLG 185
Score = 158 (60.7 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 62/258 (24%), Positives = 103/258 (39%)
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
VW+WG + QLG L+ + L +++ A + V++ G G ++ WG
Sbjct: 17 VWSWGAGTDGQLGTTKLQDELL-PQLLSLTSLPSISMLACGGAHVIALTSG--GKVFTWG 73
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
+ GQLG G DI +P V I + + GW H+ ++ G +F G + G++
Sbjct: 74 RGSSGQLGHG-DILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQL 132
Query: 205 GNLGKALE-SSPLD----SNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIWE-- 257
G+ G L S+P +N ++ G K + +
Sbjct: 133 GH-GDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRI 191
Query: 258 -----PFLVEG---VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD 309
P +V G VEVV I+ DHS + +G S G G G + P
Sbjct: 192 KSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCG--GPDVHAPQSLPSP 249
Query: 310 INFHPVSISSGLGHSLAI 327
++F V++ G H+L +
Sbjct: 250 LSFREVAV--GWNHALLL 265
Score = 125 (49.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 52/197 (26%), Positives = 91/197 (46%)
Query: 25 SGTAVVSFGDGSQGALGLPTS-LTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNN 82
+G V FG G +G LG + + V P V GL +V +SA HS A++ +
Sbjct: 169 AGNQVCGFGSGKRGQLGFSSDRIKSVN----LPCVVSGLKDVEVVRISANGDHSAAISAD 224
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWV 142
G ++WGR G + A + P + + V + ++ + DG ++
Sbjct: 225 GQFFSWGRGF-----CGGPDVHAPQSLPSPLSFRE---VAVGWNHALLLTV---DGEVFK 273
Query: 143 WGKSKRGQ---LGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
G + Q L D +EA+ +V G K+++++ G H+ A TE+G++ WG+
Sbjct: 274 LGSTLNKQPEKQQLQIDSSEALF-EKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWG 332
Query: 200 ADGRIGNLGKALE-SSP 215
G++G LG + +SP
Sbjct: 333 EHGQLG-LGNTNDQTSP 348
Score = 117 (46.2 bits), Expect = 0.00039, P = 0.00039
Identities = 49/168 (29%), Positives = 74/168 (44%)
Query: 23 SASG--TAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVT 80
SA+G +A +S DG + G G G D + P +P P V+ G H+L +T
Sbjct: 212 SANGDHSAAIS-ADGQFFSWG--RGFCG-GPDVHAPQSLPS-PLSFREVAVGWNHALLLT 266
Query: 81 NNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSL 140
+G V+ G Q + L+ ++ ++V D V V A S+A+ ++G +
Sbjct: 267 VDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEV 326
Query: 141 WVWGKSKRGQLGLGK--DITEAIVPSRVEALAGEKIVKVSFGWGHALA 186
WG + GQLGLG D T + S K +KV G G A
Sbjct: 327 KTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIKVYCGSGFTYA 374
Score = 113 (44.8 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
++ +W WG GQLG K + + ++P + + I ++ G H +A T GK+F
Sbjct: 13 EEEQVWSWGAGTDGQLGTTK-LQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFT 71
Query: 196 WGYSADGRIGN 206
WG + G++G+
Sbjct: 72 WGRGSSGQLGH 82
Score = 92 (37.4 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 29/109 (26%), Positives = 49/109 (44%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN-FHPVSISSGLGHS 324
+ A G+ HS + +G + +CG+ +GQLG P ++ F+ S+
Sbjct: 102 ITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVK------ 155
Query: 325 LAICEVRSSNVTGGARGIVSWGWNRSSQLG----RMGPDNVPLVVEGLE 369
+ C +R S V + +G + QLG R+ N+P VV GL+
Sbjct: 156 MVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLK 204
Score = 84 (34.6 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 268 DIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLG-HSLA 326
++A G++H+L+L +G + GS + Q EKQ + + + F V G+ +A
Sbjct: 254 EVAVGWNHALLLTVDGEVFKLGSTLNKQ--PEKQQLQIDSSEALFEKVPDFDGVKVMQIA 311
Query: 327 ICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN 360
S+ VT + +WGW QLG +G N
Sbjct: 312 AGAEHSAAVTENGE-VKTWGWGEHGQLG-LGNTN 343
Score = 74 (31.1 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 262 EGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+GV+V+ IA G +HS + NG + + G +GQLG
Sbjct: 303 DGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLG 338
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 192 (72.6 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 53/181 (29%), Positives = 96/181 (53%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V++ G G G LGL ++ + +P VP +P D+ AG H++ ++ +G V+++
Sbjct: 37 VLTLGQGDVGQLGLGENVM----ERKKPALVP-IPEDIVQAEAGGMHTVCLSKSGQVYSF 91
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG--KS 146
G N+E LGR + P +VE L Q V A ++A+ +DG +++WG +
Sbjct: 92 GCNDEGALGRDT-SVEGSEMVPGKVE-L-QEKVVQVSAGDSHTAALTEDGRVFLWGSFRD 148
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
G +GL + + +++VP +V+ +VKV+ G H + T DG+L+ G G++G
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQL--SMPVVKVASGNDHLVMLTADGELYTLGSGEQGQLGR 206
Query: 207 L 207
+
Sbjct: 207 V 207
Score = 151 (58.2 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 57/214 (26%), Positives = 97/214 (45%)
Query: 19 IFMRSASGTAVVSFGDGSQGALG-LPTSLTGVGG-DAYEPTRVPGLPSDVTSVSAGH--- 73
+ M +A G + + G G QG LG +P GG E VP + S GH
Sbjct: 184 LVMLTADGE-LYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRF 242
Query: 74 -------YHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL-DQVNVCAAF 125
Y + A+++ G V+ +G +N QLG ES P+ + + F
Sbjct: 243 QDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFV---PQNLTSFKNSTKSWVRF 299
Query: 126 ASGVVSSAIGD-DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
+ G + D +G + G+++ G+LGLG+ E VP+ + L V G+A
Sbjct: 300 SGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPAVSSVACGASVGYA 359
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGKALES-SPLD 217
+ T+DG++F WG + ++G G+ ++ SP++
Sbjct: 360 V--TKDGRVFAWGMGTNYQLGT-GQEEDAWSPVE 390
Score = 126 (49.4 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 44/136 (32%), Positives = 66/136 (48%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
H T G V G+ + QLG G E+ P V + + ++ A A G+ + +
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLG--ENVMERKKPALVP-IPE-DIVQAEAGGMHTVCL 82
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEA-IVPSRVEALAGEKIVKVSFGWGHALAQTEDGKL 193
G ++ +G + G LG + + +VP +VE EK+V+VS G H A TEDG++
Sbjct: 83 SKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKVVQVSAGDSHTAALTEDGRV 140
Query: 194 FGWGYSAD--GRIGNL 207
F WG D G IG L
Sbjct: 141 FLWGSFRDNNGVIGLL 156
Score = 58 (25.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 258 PFLVEGVEVVD-IACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI------ 310
P L+ + V +ACG + ++G + + G QLG +++ PV++
Sbjct: 338 PTLISRLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLE 397
Query: 311 NFHPVSISSGLGHSLAI 327
N +S+SSG H++ +
Sbjct: 398 NRMVLSVSSGGQHTVLL 414
Score = 56 (24.8 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 24/84 (28%), Positives = 34/84 (40%)
Query: 272 GFDHSLVLGRNGVLLSCGSNVYGQLGR-EKQDMGMFPVDINFHPVSISSGLGHSLAICEV 330
G H++ + G S G YG+LG E + P I+ P S G S+
Sbjct: 302 GQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPAVSSVACGASVGYA-- 359
Query: 331 RSSNVTGGARGIVSWGWNRSSQLG 354
VT R + +WG + QLG
Sbjct: 360 ----VTKDGR-VFAWGMGTNYQLG 378
Score = 38 (18.4 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
V D CG + + G + G + Y QLG
Sbjct: 240 VRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLG 273
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 216 (81.1 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 60/199 (30%), Positives = 97/199 (48%)
Query: 21 MRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVT 80
+ G + ++G G LG+ T + + G+P + +SAG HS+A++
Sbjct: 150 LSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVE-HLSGVP--LVQISAGKAHSMALS 206
Query: 81 NNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSL 140
+G +++WGRN+ QLG G + P +E LD V G ++ + DG +
Sbjct: 207 MSGNIYSWGRNDLGQLGLGHTNGE---DFPSLIEALDNQKVEFLACGGSHTALLTKDGLV 263
Query: 141 WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFG--WGHALAQTED-GKLFGWG 197
+ +G K GQLG E + P V LAG ++ +V+ G W H LA D GK+F +G
Sbjct: 264 FTFGAGKYGQLGHNSTQNE-LRPRLVTELAGNRVTQVACGSRW-HTLAYVSDLGKVFSFG 321
Query: 198 YSADGRIGNLGKALESSPL 216
+G++GN G + PL
Sbjct: 322 SGKEGQLGNGGTHNQLIPL 340
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 51/152 (33%), Positives = 79/152 (51%)
Query: 66 VTSVSAGHYHSLAVTNN--GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA 123
+ ++ G YHSLA++ G ++AWG+N QLG G L + P+ VE L V +
Sbjct: 137 IIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIP--TPQLVEHLSGVPLVQ 194
Query: 124 AFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGH 183
A S A+ G+++ WG++ GQLGLG E PS +EAL +K+ ++ G H
Sbjct: 195 ISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDF-PSLIEALDNQKVEFLACGGSH 253
Query: 184 ALAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
T+DG +F +G G++G+ E P
Sbjct: 254 TALLTKDGLVFTFGAGKYGQLGHNSTQNELRP 285
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 169 (64.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 58/185 (31%), Positives = 82/185 (44%)
Query: 26 GTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAV 85
G V S G+ S G G + +++ R+ V V+ G HSL +T+ G V
Sbjct: 192 GEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDQGEV 251
Query: 86 WAWGRNNEVQLGRGALESRATWNDPKRVEG-LDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
++ G + Q G G +T P ++ G L VNV G A+ DG L+ WG
Sbjct: 252 YSCGWGADGQTGLGHYNITST---PTKLGGDLAGVNVVQVATYGDCCLAVSADGGLFGWG 308
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFGWGYSADG 202
S+ QL D T+ VP R +G VK + G G A+ E G +F WGY G
Sbjct: 309 NSEYLQLASVTDSTQVNVP-RCLPFSGVGQVKQAACGGTGCAVLNGE-GHVFVWGYGILG 366
Query: 203 RIGNL 207
+ NL
Sbjct: 367 KGPNL 371
Score = 154 (59.3 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 53/155 (34%), Positives = 77/155 (49%)
Query: 55 EPTRVPGLPSD------VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWN 108
EP+ VP LP D V VS G HSL +T+ V++ G N+ Q GR +E+ ++
Sbjct: 160 EPSPVP-LPLDRPQETRVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEI-YS 217
Query: 109 DPKRVEGLDQVN-VCAAFASGVVSSA-IGDDGSLWVWGKSKRGQLGLGK-DITEAIVPSR 165
+ RV + + A G S + D G ++ G GQ GLG +IT P++
Sbjct: 218 ESHRVHRMQDFDGQVVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITST--PTK 275
Query: 166 VEA-LAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+ LAG +V+V+ LA + DG LFGWG S
Sbjct: 276 LGGDLAGVNVVQVATYGDCCLAVSADGGLFGWGNS 310
Score = 140 (54.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 53/193 (27%), Positives = 87/193 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHS--LAVTNNGAVW 86
V S G G+ G GL G PT++ G + V V Y LAV+ +G ++
Sbjct: 251 VYSCGWGADGQTGL-----GHYNITSTPTKLGGDLAGVNVVQVATYGDCCLAVSADGGLF 305
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRV--EGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
WG + +QL ++ N P+ + G+ QV A +G + + +G ++VWG
Sbjct: 306 GWGNSEYLQLA--SVTDSTQVNVPRCLPFSGVGQVKQAACGGTGC--AVLNGEGHVFVWG 361
Query: 145 KSKRGQLGLGKDITEAIVPSRV--------EALAGEKIVKVSFGWGHALAQTEDGKLFGW 196
G LG G ++ E +P + E G ++ ++ G H A T G+LF W
Sbjct: 362 Y---GILGKGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGLSHFAALTNRGELFVW 418
Query: 197 GYSADGRIGNLGK 209
G + G +G +G+
Sbjct: 419 GKNIRGCLG-IGR 430
Score = 109 (43.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 60/222 (27%), Positives = 98/222 (44%)
Query: 22 RSASGTAVVSFGDGSQGALGLPTS-LTGVGGD---AYEPTR----VP---GLPSDVTSVS 70
R+ + +G GALG+PT L G G P R VP L ++S +
Sbjct: 54 RATRADRIFVWGFSFSGALGVPTFVLPGSGPQPRAGSRPRRRIQPVPYRLELDQKISSAA 113
Query: 71 AGHYHSLAVTNNG---AVWAWGRNNEVQLG--RGALESRATWN---DPKRVE-GLD--QV 119
G+ +L + VW G N + QLG R + + +P V LD Q
Sbjct: 114 CGYGFTLLSSKTKDITKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQE 173
Query: 120 NVCAAFASGVVSSAIGDDGS-LWVWGKSKRGQLG---LGKDI-TEAIVPSRVEALAGEKI 174
+ G S + DG ++ G + GQ G + +I +E+ R++ G+ +
Sbjct: 174 TRVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQ-V 232
Query: 175 VKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKA-LESSP 215
V+V+ G H+L T+ G+++ G+ ADG+ G LG + S+P
Sbjct: 233 VQVACGQDHSLFLTDQGEVYSCGWGADGQTG-LGHYNITSTP 273
Score = 86 (35.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP--VDINFHPVSISSG 320
GV+V I CG H L G L G N+ G LG + + FP V + P+ ++ G
Sbjct: 393 GVQVSRIRCGLSHFAALTNRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEPMDVACG 452
Query: 321 LGHSLAI 327
+ H + +
Sbjct: 453 VDHMVTL 459
Score = 61 (26.5 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 245 GMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRN 282
G +++Y P W + G E +D+ACG DH + L R+
Sbjct: 429 GRLEDQYFP--WR-VTMPG-EPMDVACGVDHMVTLARS 462
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 181 (68.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 66/223 (29%), Positives = 97/223 (43%)
Query: 8 VHNHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DV 66
VH H+ + S G V ++G+ S G LG G+G D P + L + +
Sbjct: 274 VH-HIACGVKHAALVSRQGE-VFTWGEASGGRLG-----HGMGKDVTGPQLIESLAATSI 326
Query: 67 TSVSAGHYHSLAVTNNGAVWAWG--RNNEVQLGRGALESRATWNDPKRVEG-LDQVNVCA 123
V+ G +H+ AVT G ++ WG +N LG G S W PKR+ G L+ + + +
Sbjct: 327 DFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSH--WI-PKRISGPLEGLQIAS 383
Query: 124 AFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGH 183
++ I G L+ +G G LG G D P VE+L+G + + V+ G H
Sbjct: 384 VSCGPWHTALITSTGQLFTFGDGTFGVLGHG-DKETVFYPREVESLSGLRTIAVACGVWH 442
Query: 184 ALAQTE-----------DGKLFGWGYSADGRIGNLGKALESSP 215
A A E GKLF WG R+G+ K P
Sbjct: 443 AAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKP 485
Score = 156 (60.0 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 53/191 (27%), Positives = 90/191 (47%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDA--YEPTRVPGLPSD---VTSVSAGHYHSLAVTNNG 83
+ ++GDG+ A L G G D + P R+ G P + + SVS G +H+ +T+ G
Sbjct: 345 IYTWGDGTHNA-----GLLGHGTDVSHWIPKRISG-PLEGLQIASVSCGPWHTALITSTG 398
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV-CAAF-ASGVV------SSAIG 135
++ +G LG G E+ + + + GL + V C + A+ +V SS+
Sbjct: 399 QLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSV 458
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
G L+ WG + +LG G D + P+ V AL +V+ G + T GK++
Sbjct: 459 SSGKLFTWGDGDKSRLGHG-DKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYT 517
Query: 196 WGYSADGRIGN 206
G + G++GN
Sbjct: 518 MGSTVYGQLGN 528
Score = 146 (56.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 45/147 (30%), Positives = 67/147 (45%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAA 124
DV ++ G H+ V+ G V+ WG + +LG G + T P+ +E L ++
Sbjct: 273 DVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHG-MGKDVT--GPQLIESLAATSIDFV 329
Query: 125 FASGVVSSAIGDDGSLWVWGKSKR--GQLGLGKDITEAIVPSRVEA-LAGEKIVKVSFGW 181
+ A+ G ++ WG G LG G D++ I P R+ L G +I VS G
Sbjct: 330 ACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWI-PKRISGPLEGLQIASVSCGP 388
Query: 182 GHALAQTEDGKLFGWGYSADGRIGNLG 208
H T G+LF +G DG G LG
Sbjct: 389 WHTALITSTGQLFTFG---DGTFGVLG 412
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 54/238 (22%), Positives = 107/238 (44%)
Query: 143 WGKSKR-GQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD 201
+G K G LG D+ ++P +E+ + ++ G HA + G++F WG ++
Sbjct: 245 FGADKNIGYLGSRSDV---LIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASG 301
Query: 202 GRIGN-LGK---------ALESSPLDS------NXXXXXXXXXXXXXXXXXKAQKLVSEG 245
GR+G+ +GK +L ++ +D + L+ G
Sbjct: 302 GRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHG 361
Query: 246 MEKEKYMPI-IWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMG 304
+ ++P I P +EG+++ ++CG H+ ++ G L + G +G LG ++
Sbjct: 362 TDVSHWIPKRISGP--LEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETV 419
Query: 305 MFPVDIN----FHPVSISSGLGHSLAICEV----RSSNVTGGARGIVSWGWNRSSQLG 354
+P ++ ++++ G+ H+ AI EV SS+V+ G + +WG S+LG
Sbjct: 420 FYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGK--LFTWGDGDKSRLG 475
Score = 137 (53.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 64/209 (30%), Positives = 93/209 (44%)
Query: 20 FMRSASGTAVVSFGDGSQGALGLPTSLT-GVGGDAYEPTRVPGLPSDVTSVSAGHYHSLA 78
F R++ VS + S A P L G G DA+ RV V+SV + H A
Sbjct: 171 FPRTSRTENSVS-SERSHVASDSPNMLVRGTGSDAF---RV-----SVSSVQSSSSHGSA 221
Query: 79 VTNN---GAVWAWGR---NNEVQLGR----GALESRATWNDPKRVEGLDQVNVCAAFASG 128
+ G V+ WG N + G G L SR+ PK +E ++V A G
Sbjct: 222 PDDCDALGDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDV-HHIACG 280
Query: 129 VVSSA-IGDDGSLWVWGKSKRGQLG--LGKDITEAIVPSRVEALAGEKIVKVSFGWGHAL 185
V +A + G ++ WG++ G+LG +GKD+T P +E+LA I V+ G H
Sbjct: 281 VKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTG---PQLIESLAATSIDFVACGEFHTC 337
Query: 186 AQTEDGKLFGWGYSADGRIGNLGKALESS 214
A T G+++ WG G LG + S
Sbjct: 338 AVTMTGEIYTWG-DGTHNAGLLGHGTDVS 365
Score = 83 (34.3 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 29/105 (27%), Positives = 47/105 (44%)
Query: 269 IACGFDHSLVLG--RNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHSLA 326
+ACG HSL +G +G + + GS VYGQLG D G P + ++ +A
Sbjct: 499 VACG--HSLTVGLTTSGKVYTMGSTVYGQLGNPNAD-GKLPCLVED---KLTKDCVEEIA 552
Query: 327 ICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--VPLVVEGLE 369
C V + +WG + +LG ++ P +V+ L+
Sbjct: 553 -CGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALK 596
Score = 62 (26.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 24/81 (29%), Positives = 35/81 (43%)
Query: 252 MPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP--VD 309
+P + E L + V +IACG H VL + + G G+LG + P VD
Sbjct: 535 LPCLVEDKLTKDC-VEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVD 593
Query: 310 I--NFHPVSISSGLGHSLAIC 328
H +I+ G + AIC
Sbjct: 594 ALKERHVKNIACGSNFTAAIC 614
Score = 39 (18.8 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 314 PVSISSGLGHSLAICE-VRSSN 334
P+ ++ GLG S +I E ++ +N
Sbjct: 799 PIPLNVGLGFSTSIAESLKKTN 820
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 189 (71.6 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 56/181 (30%), Positives = 95/181 (52%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V++ G G G LGL S+ + +P VP L DV AG H++ ++ +G V+++
Sbjct: 37 VLTLGQGDVGQLGLGESVL----ERKKPALVP-LLQDVVQAEAGGMHTVCLSQSGQVYSF 91
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG--KS 146
G N+E LGR + P +VE L Q V A ++A+ +DG +++WG +
Sbjct: 92 GCNDEGALGRDT-SVEGSEMVPGKVE-L-QEKVVQVSAGDSHTAALTEDGRVFLWGSFRD 148
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
G +GL + + +++VP +V+ A +VKV+ G H + T DG L+ G G++G
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQLDA--PVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGR 206
Query: 207 L 207
+
Sbjct: 207 V 207
Score = 134 (52.2 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 46/131 (35%), Positives = 64/131 (48%)
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T G V G+ + QLG G ES P V L +V A A G+ + + G
Sbjct: 32 TEPGLVLTLGQGDVGQLGLG--ESVLERKKPALVPLLQ--DVVQAEAGGMHTVCLSQSGQ 87
Query: 140 LWVWGKSKRGQLGLGKDITEA-IVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGY 198
++ +G + G LG + + +VP +VE EK+V+VS G H A TEDG++F WG
Sbjct: 88 VYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKVVQVSAGDSHTAALTEDGRVFLWGS 145
Query: 199 SAD--GRIGNL 207
D G IG L
Sbjct: 146 FRDNNGVIGLL 156
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 37/149 (24%), Positives = 72/149 (48%)
Query: 72 GHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL-DQVNVCAAFASGVV 130
G Y + A++ G V+ +G +N QLG S P+ + + F+ G
Sbjct: 248 GAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFI---PQNLTSFKNSTKSWVGFSGGQH 304
Query: 131 SSAIGD-DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTE 189
+ D +G + G+++ G+LGLG+ E +P+ + L V G+A+++
Sbjct: 305 HTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSK-- 362
Query: 190 DGKLFGWGYSADGRIGNLGKALES-SPLD 217
DG++F WG + ++G G+ ++ SP++
Sbjct: 363 DGRVFAWGMGTNYQLGT-GQDEDAWSPVE 390
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 44/167 (26%), Positives = 71/167 (42%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTS---VSAGHYHSLAVTNNGAV 85
V FG + LG P + G + P + + S S G +H++ + + G
Sbjct: 261 VYGFGLSNYHQLGTPGT-----GSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKA 315
Query: 86 WAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGK 145
++ GR +LG G E + P + L V+ A AS V A+ DG ++ WG
Sbjct: 316 YSLGRAEYGRLGLG--EGAEEKSIPTLISRLPVVSSVACGAS--VGYAVSKDGRVFAWGM 371
Query: 146 SKRGQLGLGKDITEAIVPSRV--EALAGEKIVKVSFGWGHALAQTED 190
QLG G+D +A P + + L ++ VS G H + +D
Sbjct: 372 GTNYQLGTGQD-EDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
Score = 105 (42.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 50/201 (24%), Positives = 83/201 (41%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGR 90
SF D + G +GL + + P +V L + V V++G+ H + +TN+G ++ G
Sbjct: 145 SFRDNN-GVIGLLEPMK----KSMVPVQVQ-LDAPVVKVASGNDHLVMLTNDGDLYTLGC 198
Query: 91 NNEVQLGR--------GALESRATWNDPKRV----EGL-DQVNVCAAFASGVVSSAIGDD 137
+ QLGR G + P+ V G +V AF + AI +
Sbjct: 199 GEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISRE 258
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG--HALAQTEDGKLFG 195
G ++ +G S QLG +P + + V F G H + +GK +
Sbjct: 259 GHVYGFGLSNYHQLGT-PGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYS 317
Query: 196 WGYSADGRIGNLGKALESSPL 216
G + GR+G LG+ E +
Sbjct: 318 LGRAEYGRLG-LGEGAEEKSI 337
Score = 60 (26.2 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 27/94 (28%), Positives = 39/94 (41%)
Query: 267 VDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR-EKQDMGMFPVDINFHPVSISSGLGHSL 325
V + G H++ + G S G YG+LG E + P I+ PV S G S+
Sbjct: 297 VGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASV 356
Query: 326 AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPD 359
V+ R + +WG + QLG G D
Sbjct: 357 GYA------VSKDGR-VFAWGMGTNYQLGT-GQD 382
Score = 58 (25.5 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 258 PFLVEGVEVVD-IACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI------ 310
P L+ + VV +ACG + ++G + + G QLG + + PV++
Sbjct: 338 PTLISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLE 397
Query: 311 NFHPVSISSGLGHSLAI 327
N +++SSG H++ +
Sbjct: 398 NRVVLTVSSGGQHTVLL 414
Score = 50 (22.7 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 16/61 (26%), Positives = 23/61 (37%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGH 323
V D CG + + R G + G + Y QLG P ++ S S +G
Sbjct: 240 VRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGF 299
Query: 324 S 324
S
Sbjct: 300 S 300
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 174 (66.3 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 62/195 (31%), Positives = 90/195 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP--SDVTSVSAGHYHSLAVTNNGAVW 86
+ ++G+ S G LG G+G D + P V L S V V+ G +H+ AVT G ++
Sbjct: 302 IFTWGEESGGRLG-----HGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELY 356
Query: 87 AWG--RNNEVQLGRGALESRATWNDPKRVEG-LDQVNVCAAFASGVVSSAIGDDGSLWVW 143
WG +N LG G+ S W PKR+ G L+ ++V + ++ I G L+ +
Sbjct: 357 TWGDGTHNVGLLGHGSDISH--WI-PKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTF 413
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTE------------DG 191
G G LG G D P VE+L+G + + VS G H A E G
Sbjct: 414 GDGTFGVLGHG-DKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSG 472
Query: 192 KLFGWGYSADGRIGN 206
KLF WG R+G+
Sbjct: 473 KLFTWGDGDKNRLGH 487
Score = 150 (57.9 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 48/148 (32%), Positives = 69/148 (46%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAA 124
DV ++ G H+ VT G ++ WG + +LG G + ++ P+ VE L +
Sbjct: 282 DVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGI--GKDVFH-PRLVESLTATSSVDF 338
Query: 125 FASGVVSS-AIGDDGSLWVWGKSKR--GQLGLGKDITEAIVPSRVE-ALAGEKIVKVSFG 180
A G + A+ G L+ WG G LG G DI+ I P R+ +L G + VS G
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWI-PKRIAGSLEGLHVASVSCG 397
Query: 181 WGHALAQTEDGKLFGWGYSADGRIGNLG 208
H T G+LF +G DG G LG
Sbjct: 398 PWHTALITSYGRLFTFG---DGTFGVLG 422
Score = 146 (56.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 52/190 (27%), Positives = 86/190 (45%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDA--YEPTRVPG-LPS-DVTSVSAGHYHSLAVTNNGAVW 86
++GDG+ L G G D + P R+ G L V SVS G +H+ +T+ G ++
Sbjct: 357 TWGDGTHNV-----GLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLF 411
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV-CAAFASGVV--------SSAIGDD 137
+G LG G E+ + + + GL + V C + + V +S+
Sbjct: 412 TFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSS 471
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G L+ WG + +LG G D + P+ V AL K++ G + T G++F G
Sbjct: 472 GKLFTWGDGDKNRLGHG-DKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMG 530
Query: 198 YSADGRIGNL 207
+ G++GNL
Sbjct: 531 STVYGQLGNL 540
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 53/190 (27%), Positives = 84/190 (44%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT-SVSAGHYHSLAVT--------- 80
+FGDG+ G LG T P V L T +VS G +H+ AV
Sbjct: 412 TFGDGTFGVLGHGDKET-----VQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNS 466
Query: 81 ---NNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDD 137
++G ++ WG ++ +LG G + R P V L N ++ +
Sbjct: 467 SSVSSGKLFTWGDGDKNRLGHGDKDPRLK---PTCVPALIDYNFHKIACGHSLTVGLTTS 523
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVE-ALAGEKIVKVSFGWGHALAQTEDGKLFGW 196
G ++ G + GQLG + T+ +P VE LA E + ++S G H A T +++ W
Sbjct: 524 GQVFTMGSTVYGQLGNLQ--TDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTW 581
Query: 197 GYSADGRIGN 206
G A+GR+G+
Sbjct: 582 GKGANGRLGH 591
Score = 130 (50.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 44/178 (24%), Positives = 81/178 (45%)
Query: 12 VNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVS 70
V ++ ++ S S + ++GDG + LG G +PT VP L + ++
Sbjct: 457 VEIIVTQSNSSSVSSGKLFTWGDGDKNRLG-----HGDKDPRLKPTCVPALIDYNFHKIA 511
Query: 71 AGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATW--NDPKRVEGLDQVNVCAAFASG 128
GH ++ +T +G V+ G QLG + + D E +++++ C A+
Sbjct: 512 CGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEIS-CGAYHVA 570
Query: 129 VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALA 186
++S ++ WGK G+LG G D+ + VP+ VEAL + ++ G + A
Sbjct: 571 ALTSR----NEVYTWGKGANGRLGHG-DLEDRKVPTIVEALKDRHVKYIACGSNYTAA 623
Score = 114 (45.2 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 30/119 (25%), Positives = 60/119 (50%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN----FHPVS 316
+EG+ V ++CG H+ ++ G L + G +G LG ++ +P ++ ++
Sbjct: 386 LEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIA 445
Query: 317 ISSGLGHSLAICE--VRSSNVTGGARG-IVSWGWNRSSQLG------RMGPDNVPLVVE 366
+S G+ H+ A+ E V SN + + G + +WG ++LG R+ P VP +++
Sbjct: 446 VSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALID 504
Score = 104 (41.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 33/117 (28%), Positives = 60/117 (51%)
Query: 108 NDPKRVEGLD--QVNVCAAFASGVVSSAIGDD---GSLWVWGK---SKRGQLGLGKDI-- 157
N +V G D +V+V +A +S SA D G +++WG+ ++G+ K+
Sbjct: 203 NMQTKVSGSDGFRVSVSSAQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASY 262
Query: 158 ----TEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN-LGK 209
T+ +VP +E+ + +++ G HA T G++F WG + GR+G+ +GK
Sbjct: 263 LTTRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGK 319
Score = 90 (36.7 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 37/110 (33%), Positives = 51/110 (46%)
Query: 269 IACGFDHSLVLG--RNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVS-----ISSGL 321
IACG HSL +G +G + + GS VYGQLG + D G P + S IS G
Sbjct: 510 IACG--HSLTVGLTTSGQVFTMGSTVYGQLGNLQTD-GKLPCLVEDKLASEFVEEISCGA 566
Query: 322 GHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGR--MGPDNVPLVVEGLE 369
H A+ S N + +WG + +LG + VP +VE L+
Sbjct: 567 YHVAALT---SRNE------VYTWGKGANGRLGHGDLEDRKVPTIVEALK 607
Score = 54 (24.1 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 22/88 (25%), Positives = 37/88 (42%)
Query: 246 MEKEKYMPIIWEPFLV-EGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMG 304
++ + +P + E L E VE +I+CG H L + + G G+LG +
Sbjct: 540 LQTDGKLPCLVEDKLASEFVE--EISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDR 597
Query: 305 MFPVDINF----HPVSISSGLGHSLAIC 328
P + H I+ G ++ AIC
Sbjct: 598 KVPTIVEALKDRHVKYIACGSNYTAAIC 625
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 173 (66.0 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 59/187 (31%), Positives = 85/187 (45%)
Query: 26 GTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAV 85
G V S G+ S G G + ++++ R+ V V+ G HSL +T+ G V
Sbjct: 198 GEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQVVQVACGQDHSLFLTDKGEV 257
Query: 86 WA--WGRNNEVQLGRGALESRATWNDPKRVEG-LDQVNVCAAFASGVVSSAIGDDGSLWV 142
++ WG + + LG + S P ++ G L VNV G A+ DGSL+
Sbjct: 258 YSCGWGADGQTGLGHYNITSA-----PTKLGGDLAGVNVVQVATYGDCCLAVSADGSLFG 312
Query: 143 WGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFGWGYSA 200
WG S+ QL D T+ VP R +G VK + G G A+ E G +F WGY
Sbjct: 313 WGNSEYLQLASVTDSTQVNVP-RCLPFSGVGQVKQAACGGTGCAVLNGE-GHVFVWGYGI 370
Query: 201 DGRIGNL 207
G+ NL
Sbjct: 371 LGKGPNL 377
Score = 153 (58.9 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 54/155 (34%), Positives = 76/155 (49%)
Query: 55 EPTRVPGLP------SDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWN 108
EP+ VP LP + V VS G HSL +T+ V++ G N+ Q GR +E+
Sbjct: 166 EPSPVP-LPLHRPQETQVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSE 224
Query: 109 DPK--RVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGK-DITEAIVPSR 165
K R++ D V A S + D G ++ G GQ GLG +IT A P++
Sbjct: 225 SHKVHRMQDFDGQVVQVACGQDH-SLFLTDKGEVYSCGWGADGQTGLGHYNITSA--PTK 281
Query: 166 VEA-LAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+ LAG +V+V+ LA + DG LFGWG S
Sbjct: 282 LGGDLAGVNVVQVATYGDCCLAVSADGSLFGWGNS 316
Score = 140 (54.3 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 54/193 (27%), Positives = 90/193 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHS--LAVTNNGAVW 86
V S G G+ G GL G PT++ G + V V Y LAV+ +G+++
Sbjct: 257 VYSCGWGADGQTGL-----GHYNITSAPTKLGGDLAGVNVVQVATYGDCCLAVSADGSLF 311
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRV--EGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
WG + +QL ++ N P+ + G+ QV A +G + + +G ++VWG
Sbjct: 312 GWGNSEYLQLA--SVTDSTQVNVPRCLPFSGVGQVKQAACGGTGC--AVLNGEGHVFVWG 367
Query: 145 KSKRGQLGLGKDITEAIVPSRVE-ALAG------E-KIVKVSFGWGHALAQTEDGKLFGW 196
G LG G ++ E +P + L G E ++ ++ G H A T+ G+LF W
Sbjct: 368 Y---GILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAALTDRGELFVW 424
Query: 197 GYSADGRIGNLGK 209
G + G +G +G+
Sbjct: 425 GKNIRGCLG-IGR 436
Score = 99 (39.9 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 30/107 (28%), Positives = 48/107 (44%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHS 324
+V+ ++CG HSLVL + S G+N YGQ GR+ + ++ H + G
Sbjct: 181 QVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQVVQ 240
Query: 325 LAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNVPLVVEGLEGE 371
+A + S +T + S GW Q G +G N+ L G+
Sbjct: 241 VACGQDHSLFLTDKGE-VYSCGWGADGQTG-LGHYNITSAPTKLGGD 285
Score = 80 (33.2 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP--VDINFHPVSISSGL 321
V V I CG H L G L G N+ G LG + + FP V + PV ++ G+
Sbjct: 400 VRVSRIRCGLSHFAALTDRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEPVDVACGV 459
Query: 322 GHSLAICE 329
H + + +
Sbjct: 460 DHMVTLAK 467
Score = 62 (26.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 245 GMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGV 284
G +++Y P W + G E VD+ACG DH + L ++ V
Sbjct: 435 GRLEDQYFP--WR-VTMPG-EPVDVACGVDHMVTLAKSFV 470
Score = 58 (25.5 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 25/90 (27%), Positives = 37/90 (41%)
Query: 22 RSASGTAVVSFGDGSQGALGLPTSLTGVGGD----AYEPTR----VP---GLPSDVTSVS 70
R+A + +G GALG+PT + G P R VP L ++S +
Sbjct: 60 RAARADRIFVWGFSFSGALGVPTFVLPSSGPHPHAGLRPRRRIQCVPYRLELDQKISSAA 119
Query: 71 AGHYHSLAVTNNG---AVWAWGRNNEVQLG 97
G+ +L + VW G N + QLG
Sbjct: 120 CGYGFTLLSSKTRDVTKVWGMGLNKDSQLG 149
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 214 (80.4 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 55/174 (31%), Positives = 91/174 (52%)
Query: 35 GSQGALGLPTSLTGVGGDAYEPTR-VPGLPSD-VTSVSAGHYHSLAVTNNGAVWAWGRNN 92
G GA+ L + D Y R + GL + V ++ G HS+A++N+G ++ WG N
Sbjct: 87 GEDGAVLLADGGKVLLMDKYTVCRPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENA 146
Query: 93 EVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLG 152
QLG + +A P+ ++ L + V A G S + G ++ WG + GQLG
Sbjct: 147 HGQLG--LRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLG 204
Query: 153 LGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
LG D T+ VP+ V++L+G+K V +S G H ++ G +F +G G++G+
Sbjct: 205 LG-DTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGH 257
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 49/186 (26%), Positives = 86/186 (46%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRN 91
+G+ + G LGL + + + + G+P V +SAG HS ++ +G V+ WG N
Sbjct: 142 WGENAHGQLGLRKEQALIQSPQHLQS-LCGIP--VAQISAGGNHSFVLSLSGVVFGWGSN 198
Query: 92 NEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQL 151
+ QLG G R K + G V++ G ++ + G+++ +G GQL
Sbjct: 199 SAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCG---GEHTATLSKGGTVFTFGSGGFGQL 255
Query: 152 GLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTE-DGKLFGWGYSADGRIGNLGKA 210
G + + P V L G K+ +V+ G H L +++ +G G++GN +
Sbjct: 256 G-HNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQV 314
Query: 211 LESSPL 216
+S PL
Sbjct: 315 KQSVPL 320
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 34/98 (34%), Positives = 58/98 (59%)
Query: 113 VEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIV--PSRVEALA 170
++GLD V S A+ +DG L+VWG++ GQLGL K+ +A++ P +++L
Sbjct: 112 LKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKE--QALIQSPQHLQSLC 169
Query: 171 GEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
G + ++S G H+ + G +FGWG ++ G++G LG
Sbjct: 170 GIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLG-LG 206
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 40/119 (33%), Positives = 62/119 (52%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG-REKQDMGMFPVDINFH---PVS 316
++ +V+ IACG HS+ L +G L G N +GQLG R++Q + P + PV+
Sbjct: 115 LDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVA 174
Query: 317 -ISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN---VPLVVEGLEGE 371
IS+G HS + +++G G WG N + QLG +G VP +V+ L G+
Sbjct: 175 QISAGGNHSFVL------SLSGVVFG---WGSNSAGQLG-LGDTTDRFVPTIVKSLSGK 223
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 58/222 (26%), Positives = 97/222 (43%)
Query: 166 VEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG-NLGKALESSP--LDS---- 218
++ L K+++++ G H++A + DG+LF WG +A G++G +AL SP L S
Sbjct: 112 LKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGI 171
Query: 219 ---------NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDI 269
N A +L G ++++P I + + G + V I
Sbjct: 172 PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQL-GLGDTTDRFVPTIVKS--LSGKKTVSI 228
Query: 270 ACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP---VDINFHPVS-ISSGLGHSL 325
+CG +H+ L + G + + GS +GQLG P ++ VS ++ G H+L
Sbjct: 229 SCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTL 288
Query: 326 AICEVRSSNVTGGARGIVSWGWNRSSQLGR--MGPDNVPLVV 365
+ V +N I S+G QLG +VPL V
Sbjct: 289 VL--VALTN------RIYSFGCGMQGQLGNGEQVKQSVPLPV 322
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 187 (70.9 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 54/181 (29%), Positives = 94/181 (51%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V++ G G G LGL ++ + +P V +P DV AG H++ ++ +G V+++
Sbjct: 37 VLTLGQGDVGQLGLGENVM----ERKKPALV-SIPEDVVQAEAGGMHTVCLSKSGQVYSF 91
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG--KS 146
G N+E LGR + P +VE L Q V A ++A+ DDG +++WG +
Sbjct: 92 GCNDEGALGRDT-SVEGSEMVPGKVE-L-QEKVVQVSAGDSHTAALTDDGRVFLWGSFRD 148
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
G +GL + + +++VP +V+ +VKV+ G H + T DG L+ G G++G
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR 206
Query: 207 L 207
+
Sbjct: 207 V 207
Score = 147 (56.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 56/214 (26%), Positives = 97/214 (45%)
Query: 19 IFMRSASGTAVVSFGDGSQGALG-LPTSLTGVGG-DAYEPTRVPGLPSDVTSVSAGH--- 73
+ M +A G + + G G QG LG +P GG E VP + S GH
Sbjct: 184 LVMLTADGD-LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRF 242
Query: 74 -------YHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL-DQVNVCAAF 125
Y + A+++ G V+ +G +N QLG ES P+ + + F
Sbjct: 243 QDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFI---PQNLTSFKNSTKSWVGF 299
Query: 126 ASGVVSSAIGD-DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
+ G + D +G + G+++ G+LGLG+ E +P+ + L V G+A
Sbjct: 300 SGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYA 359
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGKALES-SPLD 217
+ T+DG++F WG + ++G G+ ++ SP++
Sbjct: 360 V--TKDGRVFAWGMGTNYQLGT-GQDEDAWSPVE 390
Score = 60 (26.2 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 27/94 (28%), Positives = 38/94 (40%)
Query: 267 VDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR-EKQDMGMFPVDINFHPVSISSGLGHSL 325
V + G H++ + G S G YG+LG E + P I+ P S G S+
Sbjct: 297 VGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASV 356
Query: 326 AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPD 359
VT R + +WG + QLG G D
Sbjct: 357 GYA------VTKDGR-VFAWGMGTNYQLGT-GQD 382
Score = 55 (24.4 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 19/77 (24%), Positives = 36/77 (46%)
Query: 258 PFLVEGVEVVD-IACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI------ 310
P L+ + V +ACG + ++G + + G QLG + + PV++
Sbjct: 338 PTLISRLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLE 397
Query: 311 NFHPVSISSGLGHSLAI 327
N +S+SSG H++ +
Sbjct: 398 NRVVLSVSSGGQHTVLL 414
Score = 48 (22.0 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGH 323
V D CG + + G + G + Y QLG + P ++ S S +G
Sbjct: 240 VRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGF 299
Query: 324 S 324
S
Sbjct: 300 S 300
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 187 (70.9 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 54/181 (29%), Positives = 94/181 (51%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V++ G G G LGL ++ + +P V +P DV AG H++ ++ +G V+++
Sbjct: 37 VLTLGQGDVGQLGLGENVM----ERKKPALV-SIPEDVVQAEAGGMHTVCLSKSGQVYSF 91
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG--KS 146
G N+E LGR + P +VE L Q V A ++A+ DDG +++WG +
Sbjct: 92 GCNDEGALGRDT-SVEGSEMVPGKVE-L-QEKVVQVSAGDSHTAALTDDGRVFLWGSFRD 148
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
G +GL + + +++VP +V+ +VKV+ G H + T DG L+ G G++G
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR 206
Query: 207 L 207
+
Sbjct: 207 V 207
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 211 (79.3 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 48/147 (32%), Positives = 81/147 (55%)
Query: 61 GLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQV 119
GL + V ++ G HS+A+TN+G ++ WG N QLG + +A P+ ++ L +
Sbjct: 112 GLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLG--LRKEQAGTQSPQHLQSLCGI 169
Query: 120 NVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSF 179
V A G S + G ++ WG + GQLGLG D T+ +P+ V++L+G+K V +S
Sbjct: 170 PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLG-DTTDRFIPTIVKSLSGKKTVSISC 228
Query: 180 GWGHALAQTEDGKLFGWGYSADGRIGN 206
G H ++ G +F +G G++G+
Sbjct: 229 GGEHTATLSKGGTVFTFGSGGFGQLGH 255
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 32/96 (33%), Positives = 54/96 (56%)
Query: 113 VEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGE 172
++GL+ V S A+ +DG L+VWG++ GQLGL K+ P +++L G
Sbjct: 110 LKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGI 169
Query: 173 KIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
+ ++S G H+ + G +FGWG ++ G++G LG
Sbjct: 170 PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLG-LG 204
Score = 124 (48.7 bits), Expect = 0.00025, P = 0.00025
Identities = 40/119 (33%), Positives = 59/119 (49%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMG-MFPVDINFH---PVS 316
+E +V+ IACG HS+ L +G L G N GQLG K+ G P + PV+
Sbjct: 113 LENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVA 172
Query: 317 -ISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN---VPLVVEGLEGE 371
IS+G HS + +++G G WG N + QLG +G +P +V+ L G+
Sbjct: 173 QISAGGNHSFVL------SLSGVVFG---WGSNSAGQLG-LGDTTDRFIPTIVKSLSGK 221
Score = 122 (48.0 bits), Expect = 0.00041, P = 0.00041
Identities = 58/222 (26%), Positives = 96/222 (43%)
Query: 166 VEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG-NLGKALESSP--LDS---- 218
++ L ++++++ G H++A T DG+LF WG +A G++G +A SP L S
Sbjct: 110 LKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGI 169
Query: 219 ---------NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDI 269
N A +L G ++++P I + + G + V I
Sbjct: 170 PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQL-GLGDTTDRFIPTIVKS--LSGKKTVSI 226
Query: 270 ACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP---VDINFHPVS-ISSGLGHSL 325
+CG +H+ L + G + + GS +GQLG P ++ VS ++ G H+L
Sbjct: 227 SCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTL 286
Query: 326 AICEVRSSNVTGGARGIVSWGWNRSSQLGR--MGPDNVPLVV 365
+ SSN I S+G QLG +VPL V
Sbjct: 287 VFED--SSNQ------IYSFGCGMQGQLGNGEQVKQSVPLPV 320
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 184 (69.8 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 55/181 (30%), Positives = 93/181 (51%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V++ G G G LGL S+ + +P VP L DV AG H++ + +G V+++
Sbjct: 37 VLTLGQGDVGQLGLGESVL----ERKKPALVP-LLQDVVQAEAGGMHTVCLNQSGQVYSF 91
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG--KS 146
G N+E LGR + P +VE L Q V A ++A+ +DG +++WG +
Sbjct: 92 GCNDEGALGRDT-SVEGSEMVPGKVE-L-QEKVVQVSAGDSHTAALTEDGRVFLWGSFRD 148
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
G +GL + + +++VP +V+ +VKV+ G H + T DG L+ G G++G
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQL--DMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGR 206
Query: 207 L 207
+
Sbjct: 207 V 207
Score = 135 (52.6 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 47/136 (34%), Positives = 65/136 (47%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
H T G V G+ + QLG G ES P V L +V A A G+ + +
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLG--ESVLERKKPALVPLLQ--DVVQAEAGGMHTVCL 82
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEA-IVPSRVEALAGEKIVKVSFGWGHALAQTEDGKL 193
G ++ +G + G LG + + +VP +VE EK+V+VS G H A TEDG++
Sbjct: 83 NQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKVVQVSAGDSHTAALTEDGRV 140
Query: 194 FGWGYSAD--GRIGNL 207
F WG D G IG L
Sbjct: 141 FLWGSFRDNNGVIGLL 156
Score = 125 (49.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 54/214 (25%), Positives = 95/214 (44%)
Query: 19 IFMRSASGTAVVSFGDGSQGALG-LPTSLTGVGG-DAYEPTRVP--------GLPSDVTS 68
+ M + G + + G G QG LG +P GG E VP G V
Sbjct: 184 LVMLTTDGD-LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRF 242
Query: 69 VSA--GHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL-DQVNVCAAF 125
A G Y + A++ G V+ +G +N QLG A+ P+ + + F
Sbjct: 243 QDAFCGAYLTFAISREGHVYGFGLSNYHQLGT---PGTASCFIPQNLTSFKNSTKSWVGF 299
Query: 126 ASGVVSSAIGD-DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
+ G + D +G + G+++ G+LGLG+ E +P+ + L V G+A
Sbjct: 300 SGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYA 359
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGKALES-SPLD 217
+++ DG++F WG + ++G G+ ++ SP++
Sbjct: 360 VSK--DGRVFAWGMGTNYQLGT-GQDEDAWSPVE 390
Score = 61 (26.5 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 27/94 (28%), Positives = 39/94 (41%)
Query: 267 VDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR-EKQDMGMFPVDINFHPVSISSGLGHSL 325
V + G H++ + G S G YG+LG E + P I+ PV S G S+
Sbjct: 297 VGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASV 356
Query: 326 AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPD 359
V+ R + +WG + QLG G D
Sbjct: 357 GYA------VSKDGR-VFAWGMGTNYQLGT-GQD 382
Score = 58 (25.5 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 258 PFLVEGVEVVD-IACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI------ 310
P L+ + VV +ACG + ++G + + G QLG + + PV++
Sbjct: 338 PTLISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLE 397
Query: 311 NFHPVSISSGLGHSLAI 327
N +++SSG H++ +
Sbjct: 398 NRVVLTVSSGGQHTVLL 414
Score = 47 (21.6 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 16/61 (26%), Positives = 23/61 (37%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGH 323
V D CG + + R G + G + Y QLG P ++ S S +G
Sbjct: 240 VRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGF 299
Query: 324 S 324
S
Sbjct: 300 S 300
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 213 (80.0 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 57/187 (30%), Positives = 88/187 (47%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWAWG 89
+FG G G LGL + P V L + +S+G HSL +TN G V+++G
Sbjct: 361 TFGRGDHGRLGLGEQSLLMQST---PKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFG 417
Query: 90 RNNEVQLGRGALESRAT------WNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
RN++ QLG G ++ T W + + +N+ A G S AI D+ + W
Sbjct: 418 RNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAW 477
Query: 144 GKSKRGQLGLGKDIT-----EAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGY 198
G+S G LG D+ ++ S + K + VS G+ H +A + DG L+ WG
Sbjct: 478 GRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGC 537
Query: 199 SADGRIG 205
+A R+G
Sbjct: 538 NAGQRLG 544
Score = 103 (41.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 114 EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGE- 172
E +Q + + SS I D G+L+ +G G+LG G ++ P VE +
Sbjct: 183 EMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHG-NLESYSSPKLVEFFQTKP 241
Query: 173 --KIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESS 214
++V ++ G H+LA T GK++ WG + ++G LG SS
Sbjct: 242 SLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLG-LGNGSSSS 284
Score = 100 (40.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 51/190 (26%), Positives = 89/190 (46%)
Query: 31 SFGDGSQGALGLPT--SLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
+FGDG G LG S + + T+ P L V S++ G HSLA+T G V++W
Sbjct: 211 TFGDGLLGKLGHGNLESYSSPKLVEFFQTK-PSLR--VVSIANGGKHSLALTICGKVYSW 267
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKR 148
G N+ QLG G S + ++ P+ + ++ + +S ++ + +
Sbjct: 268 GGNDSCQLGLGNGSSSSYYSLPQLINF--NISYNNNNNNNNNNSTNNNNNNN---NDGAQ 322
Query: 149 GQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
Q L ++ + +++ KIVK+S G + T+ G LF +G GR+G LG
Sbjct: 323 QQFSLSQNSSSN--NNKI------KIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLG-LG 373
Query: 209 KA---LESSP 215
+ ++S+P
Sbjct: 374 EQSLLMQSTP 383
Score = 96 (38.9 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLD---QVNVC 122
+ +S G HS +T+ G ++ +G +LG G LES ++ PK VE + V
Sbjct: 190 IVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLES---YSSPKLVEFFQTKPSLRVV 246
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLG 154
+ G S A+ G ++ WG + QLGLG
Sbjct: 247 SIANGGKHSLALTICGKVYSWGGNDSCQLGLG 278
Score = 85 (35.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 30/98 (30%), Positives = 51/98 (52%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPV-----DINFH-PVSI 317
+++V ++CG + S V+ G+L + G +G+LG +Q + M + H + +
Sbjct: 338 IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDM 397
Query: 318 SSGLGHSLAICEVRSSNVTGGARGIV-SWGWNRSSQLG 354
SSG GHSL + +N +G+V S+G N QLG
Sbjct: 398 SSGGGHSLVL-----TN-----KGLVFSFGRNDQGQLG 425
Score = 79 (32.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 258 PFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
P LV+ ++ ++D++ G HSLVL G++ S G N GQLG
Sbjct: 383 PKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLG 425
Score = 78 (32.5 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 28/107 (26%), Positives = 47/107 (43%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMG--MFPVDINFHPV------ 315
+ ++ ++ G HS+ + N + G + YG LG G PV IN + V
Sbjct: 453 INIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVK 512
Query: 316 --SISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN 360
+SSG H++A+ ++ G + SWG N +LG +N
Sbjct: 513 FIDVSSGFQHNVAM------SIDGS---LYSWGCNAGQRLGFKSDEN 550
Score = 75 (31.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 15/64 (23%), Positives = 36/64 (56%)
Query: 246 MEKEKYMPIIWEP--FLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDM 303
++ ++ +P++ +V+ V+ +D++ GF H++ + +G L S G N +LG + +
Sbjct: 491 VQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDEN 550
Query: 304 GMFP 307
+ P
Sbjct: 551 QLTP 554
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 209 (78.6 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 50/144 (34%), Positives = 81/144 (56%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAA 124
++ ++ G YHSLA++ G ++AWG+N + QLG G + A+ + P+ VE L V +
Sbjct: 149 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIF--ASTSTPEIVENLSGVPLVQI 206
Query: 125 FASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
A S A+ G+++ WG++ GQLGLG + PS +EAL +K+ ++ G H
Sbjct: 207 SAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKES-PSCIEALDDQKVEFLACGGCHT 265
Query: 185 LAQTEDGKLFGWGYSADGRIGNLG 208
T+ G +F +G DG+ G LG
Sbjct: 266 ALLTKSGLVFTFG---DGKYGQLG 286
Score = 205 (77.2 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 54/186 (29%), Positives = 91/186 (48%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNG 83
+ G + ++G G LG+ + G+P + +SAG HS+A++ +G
Sbjct: 164 SKGGELFAWGQNLDGQLGVGRIFASTSTPEIVEN-LSGVP--LVQISAGEAHSMALSMSG 220
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
V++WGRN+ QLG G ++ + P +E LD V G ++ + G ++ +
Sbjct: 221 NVYSWGRNDCGQLGLGHTYNKES---PSCIEALDDQKVEFLACGGCHTALLTKSGLVFTF 277
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTED-GKLFGWGYSADG 202
G K GQLG E + P V L G ++ +++ G H LA D GK+F +G +G
Sbjct: 278 GDGKYGQLGHNSTQNE-LRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEG 336
Query: 203 RIGNLG 208
++GN G
Sbjct: 337 QLGNGG 342
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 32/101 (31%), Positives = 53/101 (52%)
Query: 116 LDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIV 175
L + N+ S A+ G L+ WG++ GQLG+G+ P VE L+G +V
Sbjct: 145 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLV 204
Query: 176 KVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKAL-ESSP 215
++S G H++A + G ++ WG + G++G LG + SP
Sbjct: 205 QISAGEAHSMALSMSGNVYSWGRNDCGQLG-LGHTYNKESP 244
Score = 119 (46.9 bits), Expect = 0.00084, P = 0.00083
Identities = 58/233 (24%), Positives = 103/233 (44%)
Query: 160 AIVPSRVEALAGEK-IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGK--ALESSP- 215
+I +R + + EK I++++ G H+LA ++ G+LF WG + DG++G +G+ A S+P
Sbjct: 135 SIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLG-VGRIFASTSTPE 193
Query: 216 LDSNXXXX---XXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIW-----EPFLVEGVE-- 265
+ N + + S G + + P +E ++
Sbjct: 194 IVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQ 253
Query: 266 -VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP--VD--INFHPVSISSG 320
V +ACG H+ +L ++G++ + G YGQLG + P V + I+ G
Sbjct: 254 KVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACG 313
Query: 321 LGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--VPLVVEGLEGE 371
H+LA + TG + S+G + QLG G N +P ++ L E
Sbjct: 314 RQHTLAYV-----SDTGK---VFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSE 358
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 209 (78.6 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 51/153 (33%), Positives = 82/153 (53%)
Query: 55 EPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRV 113
E + + GL + V ++ G HS+A+TN+G ++ WG N QLG + +A P+ +
Sbjct: 108 ECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLG--LRKEQAGTQSPRHL 165
Query: 114 EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEK 173
+ L + V A G S + G ++ WG + GQLGLG D T+ VP+ V +L +K
Sbjct: 166 QSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLG-DTTDRFVPTVVNSLKRKK 224
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
IV +S G H A + G +F +G G++G+
Sbjct: 225 IVSISCGGEHTAALAKGGTVFTFGSGGFGQLGH 257
Score = 186 (70.5 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 54/186 (29%), Positives = 87/186 (46%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRN 91
+G+ + G LGL G + + + G+P V +SAG HS ++ +G V+ WG N
Sbjct: 142 WGENALGQLGLRKEQAGTQSPRHLQS-LCGIP--VAQISAGGNHSFVLSLSGVVFGWGGN 198
Query: 92 NEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQL 151
+ QLG G R P V L + + + G ++A+ G+++ +G GQL
Sbjct: 199 SAGQLGLGDTTDRFV---PTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQL 255
Query: 152 GLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKL-FGWGYSADGRIGNLGKA 210
G + P V L G K+ +V+ G H L T KL + +G G++GN +
Sbjct: 256 G-HNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQV 314
Query: 211 LESSPL 216
+S PL
Sbjct: 315 KQSVPL 320
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 35/112 (31%), Positives = 61/112 (54%)
Query: 97 GRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKD 156
G+ + ++T P ++GL+ V S A+ +DG L+VWG++ GQLGL K+
Sbjct: 98 GKVLIMDKSTECSP--LKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKE 155
Query: 157 ITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
P +++L G + ++S G H+ + G +FGWG ++ G++G LG
Sbjct: 156 QAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLG-LG 206
Score = 120 (47.3 bits), Expect = 0.00068, P = 0.00068
Identities = 55/224 (24%), Positives = 97/224 (43%)
Query: 164 SRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG-NLGKALESSP--LDS-- 218
S ++ L ++++++ G H++A T DG+LF WG +A G++G +A SP L S
Sbjct: 110 SPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLC 169
Query: 219 -----------NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVV 267
N A +L G ++++P + ++ ++V
Sbjct: 170 GIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQL-GLGDTTDRFVPTVVNS--LKRKKIV 226
Query: 268 DIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHSLA- 326
I+CG +H+ L + G + + GS +GQLG F + HP ++ G ++
Sbjct: 227 SISCGGEHTAALAKGGTVFTFGSGGFGQLGHNS-----FKDE--HHPRLVAELWGSKVSQ 279
Query: 327 -ICEVRSSNV-TGGARGIVSWGWNRSSQLGR--MGPDNVPLVVE 366
C + V T + I S+G QLG +VPL V+
Sbjct: 280 VTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLPVD 323
Score = 119 (46.9 bits), Expect = 0.00087, P = 0.00087
Identities = 41/117 (35%), Positives = 57/117 (48%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMG-MFPVDINFH---PVS 316
+E +V+ IACG HS+ L +G L G N GQLG K+ G P + PV+
Sbjct: 115 LENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVA 174
Query: 317 -ISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN---VPLVVEGLE 369
IS+G HS + +++G G WG N + QLG +G VP VV L+
Sbjct: 175 QISAGGNHSFVL------SLSGVVFG---WGGNSAGQLG-LGDTTDRFVPTVVNSLK 221
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 209 (78.6 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 45/141 (31%), Positives = 77/141 (54%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V ++ G HS+A++N+G ++ WG N QLG + +A P+ ++ L ++ V
Sbjct: 117 VIQIACGDQHSMALSNDGQLFVWGENTHGQLG--LRKEQAGTQSPQHLQSLCEIPVAQIS 174
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHAL 185
A G S + G ++ WG + GQLGLG D + VP+ V++L G+K V +S G H
Sbjct: 175 AGGNHSFVLSLSGVVFGWGSNSAGQLGLG-DTKDRFVPTIVKSLCGKKTVSISCGGEHTA 233
Query: 186 AQTEDGKLFGWGYSADGRIGN 206
++ G +F +G G++G+
Sbjct: 234 TLSKGGTVFTFGSGGFGQLGH 254
Score = 171 (65.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 52/187 (27%), Positives = 84/187 (44%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGR 90
+G+ + G LGL G P + L V +SAG HS ++ +G V+ WG
Sbjct: 139 WGENTHGQLGLRKEQAGT----QSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGS 194
Query: 91 NNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQ 150
N+ QLG G + R P V+ L + G ++ + G+++ +G GQ
Sbjct: 195 NSAGQLGLGDTKDRFV---PTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQ 251
Query: 151 LGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKL-FGWGYSADGRIGNLGK 209
LG + + P + L G K+ +V+ G H L E KL + +G G++GN +
Sbjct: 252 LG-HNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQ 310
Query: 210 ALESSPL 216
+S PL
Sbjct: 311 VKQSVPL 317
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 131 SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTED 190
S A+ +DG L+VWG++ GQLGL K+ P +++L + ++S G H+ +
Sbjct: 127 SMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLSLS 186
Query: 191 GKLFGWGYSADGRIGNLG 208
G +FGWG ++ G++G LG
Sbjct: 187 GVVFGWGSNSAGQLG-LG 203
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 41/119 (34%), Positives = 60/119 (50%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMG-MFPVDINFH---PVS 316
+E +V+ IACG HS+ L +G L G N +GQLG K+ G P + PV+
Sbjct: 112 LENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVA 171
Query: 317 -ISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN---VPLVVEGLEGE 371
IS+G HS + +++G G WG N + QLG +G VP +V+ L G+
Sbjct: 172 QISAGGNHSFVL------SLSGVVFG---WGSNSAGQLG-LGDTKDRFVPTIVKSLCGK 220
Score = 122 (48.0 bits), Expect = 0.00041, P = 0.00041
Identities = 57/222 (25%), Positives = 96/222 (43%)
Query: 166 VEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG-NLGKALESSP--LDS---- 218
+++L ++++++ G H++A + DG+LF WG + G++G +A SP L S
Sbjct: 109 LKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEI 168
Query: 219 ---------NXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDI 269
N A +L G K++++P I + G + V I
Sbjct: 169 PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQL-GLGDTKDRFVPTIVKSLC--GKKTVSI 225
Query: 270 ACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP---VDINFHPVS-ISSGLGHSL 325
+CG +H+ L + G + + GS +GQLG P ++ VS ++ G H+L
Sbjct: 226 SCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTL 285
Query: 326 AICEVRSSNVTGGARGIVSWGWNRSSQLGR--MGPDNVPLVV 365
E SS + I S+G QLG +VPL V
Sbjct: 286 VFEE--SSKL------IYSFGCGMQGQLGNGEQVKQSVPLPV 319
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 165 (63.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 53/182 (29%), Positives = 83/182 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWA- 87
V + G+ S G G + +++ ++ S V V G HSL T GAV+A
Sbjct: 186 VFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDSRVVQVVCGQDHSLFRTKKGAVFAC 245
Query: 88 -WGRNNEVQLGRGALESRATWNDPKRVEG-LDQVNVCAAFASGVVSSAIGDDGSLWVWGK 145
WG + + LG + S P ++ G + VN+ + G A+ D+G L+ WG
Sbjct: 246 GWGADGQTGLGHYNITSV-----PTKLGGDIAGVNIVQVSSYGDCCLAVSDEGDLFGWGN 300
Query: 146 SKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
S+ QL + T+ VP + G KI + + G + TE+G +F WGY G+
Sbjct: 301 SEYLQLASVTETTQVNVPRHLPFKIG-KIKEAACGGTGNIVLTEEGAVFVWGYGILGKGP 359
Query: 206 NL 207
NL
Sbjct: 360 NL 361
Score = 151 (58.2 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 56/200 (28%), Positives = 97/200 (48%)
Query: 22 RSASGTAVVSFGDGSQGALGLPT-SLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHS--LA 78
R+ G AV + G G+ G GL ++T V PT++ G + V V Y LA
Sbjct: 236 RTKKG-AVFACGWGADGQTGLGHYNITSV------PTKLGGDIAGVNIVQVSSYGDCCLA 288
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE-GLDQVNVCAAFASGVVSSAIGDD 137
V++ G ++ WG + +QL ++ N P+ + + ++ A +G + + ++
Sbjct: 289 VSDEGDLFGWGNSEYLQLA--SVTETTQVNVPRHLPFKIGKIKEAACGGTGNI--VLTEE 344
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVE-ALAG-------EKIVKVSFGWGHALAQTE 189
G+++VWG G LG G ++TE VP + +L G ++ +V G H A T
Sbjct: 345 GAVFVWGY---GILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFAALTN 401
Query: 190 DGKLFGWGYSADGRIGNLGK 209
G+LF WG + G +G +G+
Sbjct: 402 RGELFVWGKNLRGCLG-IGR 420
Score = 148 (57.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 61/192 (31%), Positives = 88/192 (45%)
Query: 27 TAVVSFGDGSQGALGLPTSLTG-VGGDAY--EPTRVPGLPSD------VTSVSAGHYHSL 77
T V G LG S+ G Y EP+ +P LP + V VS G HSL
Sbjct: 120 TKVWGMGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIP-LPLEKPQKTRVLQVSCGRAHSL 178
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDD 137
+T++ V+ G N+ Q GR +E +++ + L+ F S VV G D
Sbjct: 179 VLTDSEGVFTMGNNSYGQCGRKVVEDEI-YSESHLIHQLND------FDSRVVQVVCGQD 231
Query: 138 --------GSLWVWGKSKRGQLGLGK-DITEAIVPSRVEA-LAGEKIVKVSFGWGHALAQ 187
G+++ G GQ GLG +IT VP+++ +AG IV+VS LA
Sbjct: 232 HSLFRTKKGAVFACGWGADGQTGLGHYNITS--VPTKLGGDIAGVNIVQVSSYGDCCLAV 289
Query: 188 TEDGKLFGWGYS 199
+++G LFGWG S
Sbjct: 290 SDEGDLFGWGNS 301
Score = 96 (38.9 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 40/159 (25%), Positives = 68/159 (42%)
Query: 66 VTSVSAGHYHSLAVTNNG---AVWAWGRNNEVQLG-RGALESRATWND--------PKRV 113
+TS + G+ +L +N VW G N + QLG + ++ R + P +
Sbjct: 100 ITSAACGYGFTLLSSNTTDITKVWGMGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIPLPL 159
Query: 114 EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSR--VEALAG 171
E + V S + D ++ G + GQ G K + + I + L
Sbjct: 160 EKPQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGR-KVVEDEIYSESHLIHQLND 218
Query: 172 --EKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
++V+V G H+L +T+ G +F G+ ADG+ G LG
Sbjct: 219 FDSRVVQVVCGQDHSLFRTKKGAVFACGWGADGQTG-LG 256
Score = 81 (33.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 256 WEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP--VDINFH 313
W F + V V + CG H L G L G N+ G LG + + FP V I
Sbjct: 377 WSDFSSD-VRVARVRCGLSHFAALTNRGELFVWGKNLRGCLGIGRMEDQYFPWRVTIPGE 435
Query: 314 PVSISSGLGHSLAI 327
V ++ G+ H +++
Sbjct: 436 VVDVACGVDHMVSM 449
Score = 45 (20.9 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 258 PFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
PF + G ++ + ACG ++VL G + G YG LG+
Sbjct: 322 PFKI-G-KIKEAACGGTGNIVLTEEGAVFVWG---YGILGK 357
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 163 (62.4 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 51/182 (28%), Positives = 78/182 (42%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWA- 87
V S G+ S G G + +++ R+ V V+ G HSL +T+ G V++
Sbjct: 195 VFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSC 254
Query: 88 -WGRNNEVQLGRGALESRATWNDPKRVEG-LDQVNVCAAFASGVVSSAIGDDGSLWVWGK 145
WG + + LG + S P ++ G L VNV G A+ DG L+ WG
Sbjct: 255 GWGADGQTGLGHYNITS-----SPTKLGGDLAGVNVIQVATYGDCCLAVSADGGLFGWGN 309
Query: 146 SKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
S+ QL D T+ VP + K+ + + G +G +F WGY G+
Sbjct: 310 SEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGP 369
Query: 206 NL 207
NL
Sbjct: 370 NL 371
Score = 138 (53.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 53/193 (27%), Positives = 88/193 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHS--LAVTNNGAVW 86
V S G G+ G GL G PT++ G + V + Y LAV+ +G ++
Sbjct: 251 VYSCGWGADGQTGL-----GHYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVSADGGLF 305
Query: 87 AWGRNNEVQLGRGALESRATWNDPK--RVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
WG + +QL ++ N P+ G+ +V A +G + + +G ++VWG
Sbjct: 306 GWGNSEYLQLA--SVTDSTQVNVPRCLHFSGVGKVRQAACGGTGC--AVLNGEGHVFVWG 361
Query: 145 KSKRGQLGLGKDITEAIVPSRVE-ALAG------E-KIVKVSFGWGHALAQTEDGKLFGW 196
G LG G ++ E+ VP + L G E ++ ++ G H A T G+LF W
Sbjct: 362 Y---GILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVW 418
Query: 197 GYSADGRIGNLGK 209
G + G +G +G+
Sbjct: 419 GKNIRGCLG-IGR 430
Score = 99 (39.9 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 266 VVDIACGFDHSLVL-GRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHS 324
V+ ++CG HSLVL R GV S G+N YGQ GR+ + ++ H + G
Sbjct: 176 VLQVSCGRAHSLVLTDREGVF-SMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQ 234
Query: 325 LAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV 361
+A + S +T + S GW Q G +G N+
Sbjct: 235 VACGQDHSLFLTDKGE-VYSCGWGADGQTG-LGHYNI 269
Score = 97 (39.2 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 46/177 (25%), Positives = 80/177 (45%)
Query: 56 PTRVPGLPSDVTSVSAGHYHSLAVTNNG---AVWAWGRNNEVQLG--RGALESRATWN-- 108
P R+ L ++S + G+ +L + VW G N + QLG R + +
Sbjct: 100 PYRLE-LDQKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYV 158
Query: 109 -DPKRVE-GLD---QVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLG---LGKDI-TE 159
+P V LD + V S + D ++ G + GQ G + +I +E
Sbjct: 159 LEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSE 218
Query: 160 AIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKA-LESSP 215
+ R++ G+ +V+V+ G H+L T+ G+++ G+ ADG+ G LG + SSP
Sbjct: 219 SHRVHRMQDFDGQ-VVQVACGQDHSLFLTDKGEVYSCGWGADGQTG-LGHYNITSSP 273
Score = 83 (34.3 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 20/68 (29%), Positives = 32/68 (47%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP--VDINFHPVSISSGL 321
++V I CG H L G L G N+ G LG + + FP V + PV ++ G+
Sbjct: 394 IQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEPVDVACGV 453
Query: 322 GHSLAICE 329
H + + +
Sbjct: 454 DHMVTLAK 461
Score = 61 (26.5 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 245 GMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRN 282
G +++Y P W + G E VD+ACG DH + L ++
Sbjct: 429 GRLEDQYFP--WR-VTMPG-EPVDVACGVDHMVTLAKS 462
Score = 60 (26.2 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 27/90 (30%), Positives = 40/90 (44%)
Query: 22 RSASGTAVVSFGDGSQGALGLPTSL---TGVGGDA-YEPTR----VP---GLPSDVTSVS 70
R+A V +G GALG+P+ + +G G A P R VP L ++S +
Sbjct: 54 RAARADRVFVWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYRLELDQKISSAA 113
Query: 71 AGHYHSLAVTNNG---AVWAWGRNNEVQLG 97
G+ +L + VW G N + QLG
Sbjct: 114 CGYGFTLLSSKTADVTKVWGMGLNKDSQLG 143
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 161 (61.7 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 51/182 (28%), Positives = 79/182 (43%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V S G+ + G G V ++++ R+ V V G HSL +T+ G V++
Sbjct: 192 VFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVVQVVCGQDHSLFLTDKGEVYSC 251
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEG-LDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
G + Q G G +T P ++ G L V V G A+ DG ++ WG S+
Sbjct: 252 GWGADGQTGLGHYNITST---PSKLGGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSE 308
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNL 207
QL D T+ VP + K+ +V+ G E+G +F WGY G+ NL
Sbjct: 309 YLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAILNEEGHVFVWGYGILGKGPNL 368
Query: 208 GK 209
+
Sbjct: 369 SE 370
Score = 146 (56.5 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 51/155 (32%), Positives = 73/155 (47%)
Query: 55 EPTRVPGLPSD------VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWN 108
EP+ VP LP D V VS G HSL +T+ V++ G N Q GR +E ++
Sbjct: 157 EPSPVP-LPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEV-YS 214
Query: 109 DPKRVEGLDQVN--VCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGK-DITEAIVPSR 165
+ +V + V S + D G ++ G GQ GLG +IT PS+
Sbjct: 215 ESHKVHRMQDFEGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITST--PSK 272
Query: 166 VEA-LAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+ LAG +V+V+ LA + DG +FGWG S
Sbjct: 273 LGGDLAGVTVVQVATYGDCCLALSADGGVFGWGNS 307
Score = 139 (54.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 54/193 (27%), Positives = 91/193 (47%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHS--LAVTNNGAVW 86
V S G G+ G GL G P+++ G + VT V Y LA++ +G V+
Sbjct: 248 VYSCGWGADGQTGL-----GHYNITSTPSKLGGDLAGVTVVQVATYGDCCLALSADGGVF 302
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRV--EGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
WG + +QL ++ N P+ + G+ +V A +G + + ++G ++VWG
Sbjct: 303 GWGNSEYLQLA--SVTDSTQVNVPRCLPFSGVGKVKQVACGGTGC--AILNEEGHVFVWG 358
Query: 145 KSKRGQLGLGKDITEAIVPSRVE-ALAG------E-KIVKVSFGWGHALAQTEDGKLFGW 196
G LG G +++E +P + L G E K+ ++ G H A T G+LF W
Sbjct: 359 Y---GILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFAALTNKGELFVW 415
Query: 197 GYSADGRIGNLGK 209
G + G +G +G+
Sbjct: 416 GKNIRGCLG-IGR 427
Score = 85 (35.0 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP--VDINFHPVSISSGL 321
V+V I CG H L G L G N+ G LG + + FP V + PV ++ G+
Sbjct: 391 VKVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEPVDVACGV 450
Query: 322 GHSLAICE 329
H + + +
Sbjct: 451 DHMVTLAK 458
Score = 84 (34.6 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 239 QKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+K+V + + E + + F EG +VV + CG DHSL L G + SCG GQ G
Sbjct: 205 RKVVEDEVYSESHKVHRMQDF--EG-QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTG 260
Score = 79 (32.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 110 PKRVEGLDQVNVCAAFASG--VVSSAIGDDGSLWVWGKSKRGQLGLG---KDITEAI--- 161
P R+E LD AA G ++SS D +W G +K QLG KD T
Sbjct: 97 PYRLE-LDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYV 155
Query: 162 -----VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
VP ++ K+++VS G H+L T+ +F G +A G+ G
Sbjct: 156 LEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCG 204
Score = 61 (26.5 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 245 GMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRN 282
G +++Y P W + G E VD+ACG DH + L ++
Sbjct: 426 GRLEDQYFP--WR-VTMPG-EPVDVACGVDHMVTLAKS 459
Score = 43 (20.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 27/101 (26%), Positives = 39/101 (38%)
Query: 258 PFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMG---MFPVDI---- 310
PF G +V +ACG +L G + G + G+ G + M P +
Sbjct: 328 PFSGVG-KVKQVACGGTGCAILNEEGHVFVWGYGILGK-GPNLSETALPEMIPPTLFGLT 385
Query: 311 NFHP-VSISS---GLGHSLAICEVRSSNVTG-GARGIVSWG 346
F+P V +S GL H A+ V G RG + G
Sbjct: 386 EFNPEVKVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIG 426
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 187 (70.9 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 54/181 (29%), Positives = 94/181 (51%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V++ G G G LGL ++ + +P V +P DV AG H++ ++ +G V+++
Sbjct: 37 VLTLGQGDVGQLGLGENVM----ERKKPALV-SIPEDVVQAEAGGMHTVCLSKSGQVYSF 91
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG--KS 146
G N+E LGR + P +VE L Q V A ++A+ DDG +++WG +
Sbjct: 92 GCNDEGALGRDT-SVEGSEMVPGKVE-L-QEKVVQVSAGDSHTAALTDDGRVFLWGSFRD 148
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
G +GL + + +++VP +V+ +VKV+ G H + T DG L+ G G++G
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR 206
Query: 207 L 207
+
Sbjct: 207 V 207
Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 65/205 (31%), Positives = 94/205 (45%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNN 82
S SG V SFG +GALG TS V G P +V L V VSAG H+ A+T++
Sbjct: 83 SKSGQ-VYSFGCNDEGALGRDTS---VEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDD 137
Query: 83 GAVWAWG--RNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVCAAFASGVVSSAIGDDG 138
G V+ WG R+N +G LE P +V+ LD V V + V+ +A DG
Sbjct: 138 GRVFLWGSFRDNNGVIG--LLEPMKKSMVPVQVQ-LDVPVVKVASGNDHLVMLTA---DG 191
Query: 139 SLWVWGKSKRGQLGL---------GKD-ITEAIVPSRV----EALAGEKIVKVSF-GWGH 183
L+ G ++GQLG G+ + +VP V G + +F G
Sbjct: 192 DLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYF 251
Query: 184 ALAQTEDGKLFGWGYSADGRIGNLG 208
A + +G ++G+G S ++G G
Sbjct: 252 TFAISHEGHVYGFGLSNYHQLGTPG 276
Score = 39 (18.8 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
V D CG + + G + G + Y QLG
Sbjct: 240 VRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 273
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 183 (69.5 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 55/180 (30%), Positives = 85/180 (47%)
Query: 36 SQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQ 95
S G LG S EPT++ LP ++ ++ G H +A+T G V+ WG + Q
Sbjct: 204 SDGVLGYSDSQKRTA----EPTQMR-LP-EICQLATGTDHIIALTTTGKVYTWGNGQQFQ 257
Query: 96 LGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGK 155
LGR LE R + L N+ + A S AI + G ++ WG + Q G+
Sbjct: 258 LGRRMLERRRLQGLTPQPLALK--NIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEV 315
Query: 156 DITE--AIV--PSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKAL 211
+ E A++ P+ V+AL G + ++ G H LA EDG++ WG ++G AL
Sbjct: 316 EDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNAL 375
Score = 181 (68.8 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 60/204 (29%), Positives = 93/204 (45%)
Query: 16 TSRIFMRSASGTAVVSFGDGSQGALGLPT-SLTGVGGDAYEPTRVPGLPSDVTSVSAGHY 74
T I + +G V ++G+G Q LG + G +P + ++ SV AG Y
Sbjct: 235 TDHIIALTTTGK-VYTWGNGQQFQLGRRMLERRRLQGLTPQPLAL----KNIISVGAGSY 289
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGAL--ESRATWNDPKRVEGLDQVNVCAAFASGVVSS 132
HS A+ N G V+AWG N Q G E A P V+ L+ NV + +
Sbjct: 290 HSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTL 349
Query: 133 AIGDDGSLWVWGKSKRGQLGLGKD-ITEAIVP---------SRVEALAG-EKIVKVSFGW 181
A+ +DG + WG+ R QLG+ + + E +V S + G +++V G
Sbjct: 350 ALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGT 409
Query: 182 GHALAQTEDGKLFGWGYSADGRIG 205
H LA T DGK++ WG + + +G
Sbjct: 410 HHNLAVTSDGKVYSWGSAENYEVG 433
Score = 174 (66.3 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 55/193 (28%), Positives = 88/193 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD---VTSVSAGHYHSLAVTNNGAV 85
V FG GS LG+ V Y P P L +D V ++ G HS A++++G V
Sbjct: 73 VYVFGSGSMNELGMGEEEMDV---VYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRV 129
Query: 86 WAWGRNNEVQLGRGALESR-----ATWND-----PKRVEG-LDQVNVCAAFASGVVSSAI 134
+ WG N++ LGR + + ND P +VEG L + V S +++AI
Sbjct: 130 YTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAI 189
Query: 135 GDDGSLWVWG--KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGK 192
D+G + WG + G LG P+++ +I +++ G H +A T GK
Sbjct: 190 TDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRL---PEICQLATGTDHIIALTTTGK 246
Query: 193 LFGWGYSADGRIG 205
++ WG ++G
Sbjct: 247 VYTWGNGQQFQLG 259
Score = 127 (49.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 39/141 (27%), Positives = 70/141 (49%)
Query: 55 EPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLG--RGALESRATWND-- 109
+PT V L +V S++ G +H+LA+ +G V AWGR++ QLG AL ++
Sbjct: 326 KPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKG 385
Query: 110 -------PKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIV 162
P + GL NV + A+ DG ++ WG ++ ++G G + + V
Sbjct: 386 NNYYLSTPTIIPGL--TNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAV 443
Query: 163 PSRVEALAGEKI-VKVSFGWG 182
P+ V + A +++ ++V+ G
Sbjct: 444 PTLVRSKAIKEVAIRVAGAGG 464
Score = 96 (38.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 20/74 (27%), Positives = 43/74 (58%)
Query: 139 SLWVWGKSKRGQLGLGKDITEAIVPSRVEA-LAGEKI--VKVSFGWGHALAQTEDGKLFG 195
+++V+G +LG+G++ + + R+ L+ +K+ V ++ G H+ A + DG+++
Sbjct: 72 NVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYT 131
Query: 196 WGYSADGRIGNLGK 209
WG + D +G L K
Sbjct: 132 WGVNDDYALGRLTK 145
Score = 79 (32.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 36/127 (28%), Positives = 58/127 (45%)
Query: 257 EPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR---EKQDM-GMFPVDINF 312
EP + E+ +A G DH + L G + + G+ QLGR E++ + G+ P +
Sbjct: 219 EPTQMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLAL 278
Query: 313 -HPVSISSGLGHSLAICEVRSSNVTGGARG-IVSWGWNRSSQLGRMGPDNV-------PL 363
+ +S+ +G HS AI N +G + +WG N + Q G D P
Sbjct: 279 KNIISVGAGSYHSFAI-----DN-----KGRVYAWGLNITRQCGIEVEDEEEGAVITKPT 328
Query: 364 VVEGLEG 370
+V+ LEG
Sbjct: 329 LVDALEG 335
Score = 61 (26.5 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 258 PFLVEGV-EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQD 302
P ++ G+ V+ + CG H+L + +G + S GS ++G+ D
Sbjct: 393 PTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDND 438
Score = 61 (26.5 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 246 MEKEKYMPIIWEPFLV---EGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+E E+ +I +P LV EG V I G H+L L +G +L+ G + QLG
Sbjct: 315 VEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLG 369
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 158 (60.7 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 53/187 (28%), Positives = 81/187 (43%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V S G+ S G G V ++++ R+ V V G HSL +T+ G V++
Sbjct: 192 VFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSC 251
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEG-LDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
G + Q G G +T P ++ G L V V G A+ DG ++ WG S+
Sbjct: 252 GWGADGQTGLGHYNITST---PSKLGGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSE 308
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNL 207
QL D T+ VP + K+ +V+ G +G +F WGY G +G
Sbjct: 309 YLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVWGY---GILGKG 365
Query: 208 GKALESS 214
K LE++
Sbjct: 366 PKLLETA 372
Score = 150 (57.9 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 53/155 (34%), Positives = 73/155 (47%)
Query: 55 EPTRVPGLPSD------VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWN 108
EP+ VP LP D V VS G HSL +T+ V++ G N+ Q GR +E
Sbjct: 157 EPSPVP-LPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSE 215
Query: 109 DPK--RVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGK-DITEAIVPSR 165
K R++ D V S + D G ++ G GQ GLG +IT PS+
Sbjct: 216 SHKVHRMQDFDG-QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITST--PSK 272
Query: 166 VEA-LAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+ LAG +V+V+ LA + DG +FGWG S
Sbjct: 273 LGGDLAGVTVVQVATYGDCCLALSADGGVFGWGNS 307
Score = 130 (50.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 53/193 (27%), Positives = 88/193 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHS--LAVTNNGAVW 86
V S G G+ G GL G P+++ G + VT V Y LA++ +G V+
Sbjct: 248 VYSCGWGADGQTGL-----GHYNITSTPSKLGGDLAGVTVVQVATYGDCCLALSADGGVF 302
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRV--EGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
WG + +QL ++ N P+ + G+ +V A +G + + +G ++VWG
Sbjct: 303 GWGNSEYLQLA--SVTDSTQVNVPRCLPFSGVGKVKQVACGGTGC--AVLNAEGHVFVWG 358
Query: 145 KSKRGQLGLGKDITEAIVPSRVE-ALAG------E-KIVKVSFGWGHALAQTEDGKLFGW 196
G LG G + E +P + L G E ++ ++ G H A T G+LF W
Sbjct: 359 Y---GILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVW 415
Query: 197 GYSADGRIGNLGK 209
G + G +G +G+
Sbjct: 416 GKNIRGCLG-IGR 427
Score = 86 (35.3 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP--VDINFHPVSISSGL 321
V+V I CG H L G L G N+ G LG + + FP V + PV ++ G+
Sbjct: 391 VQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEPVDVACGV 450
Query: 322 GHSLAICE 329
H + + +
Sbjct: 451 DHMVTLAK 458
Score = 76 (31.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 33/109 (30%), Positives = 49/109 (44%)
Query: 110 PKRVEGLDQVNVCAAFASG--VVSSAIGDDGSLWVWGKSKRGQLGLG---KDITEAI--- 161
P R+E LD AA G ++SS D +W G +K QLG KD T
Sbjct: 97 PYRLE-LDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYV 155
Query: 162 -----VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
VP ++ K+++VS G H+L T+ +F G ++ G+ G
Sbjct: 156 LEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCG 204
Score = 61 (26.5 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 245 GMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRN 282
G +++Y P W + G E VD+ACG DH + L ++
Sbjct: 426 GRLEDQYFP--WR-VTMPG-EPVDVACGVDHMVTLAKS 459
Score = 43 (20.2 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 28/100 (28%), Positives = 39/100 (39%)
Query: 258 PFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR--EKQDMGMFPVDI----N 311
PF G +V +ACG VL G + G + G+ + E M P +
Sbjct: 328 PFSGVG-KVKQVACGGTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTE 386
Query: 312 FHP-VSISS---GLGHSLAICEVRSSNVTG-GARGIVSWG 346
F+P V +S GL H A+ V G RG + G
Sbjct: 387 FNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIG 426
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 187 (70.9 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 54/181 (29%), Positives = 94/181 (51%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V++ G G G LGL ++ + +P V +P DV AG H++ ++ +G V+++
Sbjct: 54 VLTLGQGDVGQLGLGENVM----ERKKPALV-SIPEDVVQAEAGGMHTVCLSKSGQVYSF 108
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG--KS 146
G N+E LGR + P +VE L Q V A ++A+ DDG +++WG +
Sbjct: 109 GCNDEGALGRDT-SVEGSEMVPGKVE-L-QEKVVQVSAGDSHTAALTDDGRVFLWGSFRD 165
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
G +GL + + +++VP +V+ +VKV+ G H + T DG L+ G G++G
Sbjct: 166 NNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR 223
Query: 207 L 207
+
Sbjct: 224 V 224
Score = 48 (22.0 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGH 323
V D CG + + G + G + Y QLG + P ++ S S +G
Sbjct: 257 VRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGF 316
Query: 324 S 324
S
Sbjct: 317 S 317
Score = 44 (20.5 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 17/59 (28%), Positives = 24/59 (40%)
Query: 267 VDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR-EKQDMGMFPVDINFHPVSISSGLGHS 324
V + G H++ + G S G YG+LG E + P I+ P S G S
Sbjct: 314 VGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGAS 372
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 167 (63.8 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 50/183 (27%), Positives = 89/183 (48%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V+ G G G LGL + + +P V LP + AG H++ +++ G V+ +
Sbjct: 37 VLVLGQGDVGQLGLGEDVM----ERKKPALVT-LPEGIVQAVAGGMHTVCLSDTGNVYTF 91
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG--KS 146
G N+E LGR E + P +V+ L + + A S+A+ +DG ++VWG +
Sbjct: 92 GCNDEGALGRDTSEEGSE-TVPAKVD-LGE-KIIQVSAGDSHSAALTEDGGVYVWGSFRD 148
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
G +GL + + + VP +V + +VK+ G H + T G+L+ G G++G
Sbjct: 149 NNGVIGLLEPMKKCTVPVKVPI--DKPVVKIVSGNDHLVMLTAHGELYTSGCGEQGQLGR 206
Query: 207 LGK 209
+ +
Sbjct: 207 VAE 209
Score = 155 (59.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 58/210 (27%), Positives = 95/210 (45%)
Query: 19 IFMRSASGTAVVSFGDGSQGALG-LPTSLTGVGGDA-----YEPTRVPGLPSD---VTSV 69
+ M +A G S G G QG LG + GG EP V P T V
Sbjct: 184 LVMLTAHGELYTS-GCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTDV 242
Query: 70 SAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL-DQVNVCAAFASG 128
G Y + AV+ G V+ +G +N QLG +S T P ++ + F+ G
Sbjct: 243 FCGAYFTFAVSKEGHVYGFGLSNYHQLGT---QSTNTCFVPVKLSSFKNSTTSWVGFSGG 299
Query: 129 VVSS-AIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQ 187
+ + +G + G+++ G+LGLGKD+ E P+ V ++ ++V + G + A
Sbjct: 300 QHHTLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSEPTVVPGISDVQVV--ACGASVSYAV 357
Query: 188 TEDGKLFGWGYSADGRIGNLGKALESSPLD 217
T+ G +F WG + ++G + E SP++
Sbjct: 358 TKQGSVFSWGMGTNLQLGTGEEEDEWSPVE 387
Score = 134 (52.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 51/156 (32%), Positives = 73/156 (46%)
Query: 58 RVPGLPSDVTSVSAGHY-HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL 116
R PSD T H G V G+ + QLG G E P V L
Sbjct: 9 RQTAAPSDSTVAKKLKVSHISHGQEKGLVLVLGQGDVGQLGLG--EDVMERKKPALVT-L 65
Query: 117 DQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEA---IVPSRVEALAGEK 173
+ + A A G+ + + D G+++ +G + G LG+D +E VP++V+ GEK
Sbjct: 66 PE-GIVQAVAGGMHTVCLSDTGNVYTFGCNDEG--ALGRDTSEEGSETVPAKVDL--GEK 120
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSAD--GRIGNL 207
I++VS G H+ A TEDG ++ WG D G IG L
Sbjct: 121 IIQVSAGDSHSAALTEDGGVYVWGSFRDNNGVIGLL 156
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 40/107 (37%), Positives = 54/107 (50%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNN 82
++ G A S G G LGL + G+ EPT VPG+ SDV V+ G S AVT
Sbjct: 307 NSEGKAY-SLGRAEYGRLGLGKDV----GEKSEPTVVPGI-SDVQVVACGASVSYAVTKQ 360
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVN-VCAAFASG 128
G+V++WG +QLG G E W+ P + G N V + +SG
Sbjct: 361 GSVFSWGMGTNLQLGTG--EEEDEWS-PVEMTGKQLENRVVLSVSSG 404
Score = 119 (46.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 57/193 (29%), Positives = 88/193 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V +FG +GALG TS G P +V L + VSAG HS A+T +G V+ W
Sbjct: 88 VYTFGCNDEGALGRDTSEEG---SETVPAKVD-LGEKIIQVSAGDSHSAALTEDGGVYVW 143
Query: 89 G--RNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVCAAFASGVVSSAIGDDGSLWVWG 144
G R+N +G LE P +V +D+ V + + V+ +A G+ L+ G
Sbjct: 144 GSFRDNNGVIG--LLEPMKKCTVPVKVP-IDKPVVKIVSGNDHLVMLTAHGE---LYTSG 197
Query: 145 KSKRGQLGL---------G-KDITEAIVPSRVEALAGEKIV--KVSFGWGHALAQTEDGK 192
++GQLG G K + + P V K+V V G A +++G
Sbjct: 198 CGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTDVFCGAYFTFAVSKEGH 257
Query: 193 LFGWGYSADGRIG 205
++G+G S ++G
Sbjct: 258 VYGFGLSNYHQLG 270
Score = 73 (30.8 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 27/106 (25%), Positives = 45/106 (42%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGH 323
V D+ CG + + + G + G + Y QLG + + PV ++ S +S +G
Sbjct: 237 VVFTDVFCGAYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGF 296
Query: 324 SLAICEVRSSNVTGGARGIVSWGWNRSSQLGR-MGPDNVPLVVEGL 368
S N G A + + R LG+ +G + P VV G+
Sbjct: 297 SGGQHHTLCLNSEGKAYSLGRAEYGRLG-LGKDVGEKSEPTVVPGI 341
Score = 71 (30.1 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 257 EPFLVEGVEVVDI-ACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI----- 310
EP +V G+ V + ACG S + + G + S G QLG +++ PV++
Sbjct: 334 EPTVVPGISDVQVVACGASVSYAVTKQGSVFSWGMGTNLQLGTGEEEDEWSPVEMTGKQL 393
Query: 311 -NFHPVSISSGLGHSLAI 327
N +S+SSG H++ +
Sbjct: 394 ENRVVLSVSSGGQHTVLL 411
Score = 67 (28.6 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 26/104 (25%), Positives = 37/104 (35%)
Query: 251 YMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
++P+ F V + G H+L L G S G YG+LG K D+G
Sbjct: 278 FVPVKLSSFKNSTTSWVGFSGGQHHTLCLNSEGKAYSLGRAEYGRLGLGK-DVGE----- 331
Query: 311 NFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
P + + C S + SWG + QLG
Sbjct: 332 KSEPTVVPGISDVQVVACGASVSYAVTKQGSVFSWGMGTNLQLG 375
Score = 64 (27.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
VV I G DH ++L +G L + G GQLGR
Sbjct: 174 VVKIVSGNDHLVMLTAHGELYTSGCGEQGQLGR 206
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 203 (76.5 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 85/297 (28%), Positives = 124/297 (41%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP-SDVTSVSAGHYHSLAVTNNGAVWAWG 89
S+G+ S G LG GV P + S V G +H+ AVT +G ++AWG
Sbjct: 322 SWGEESGGRLG-----HGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWG 376
Query: 90 R--NNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSA-IGDDGSLWVWGKS 146
+N LG G+ S W P R+ G + A + G +A + +G L+ +G
Sbjct: 377 DGDHNAGLLGLGSGASH--WK-PVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDG 433
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALA-------QTEDGKLFGWGYS 199
G LG G I+ I P VEAL G + +K + G H+ A T GKLF WG
Sbjct: 434 TFGALGHGDRISTNI-PREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDG 492
Query: 200 ADGRIGNLG---KALES--SPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPI 254
DGR+G+ + + S + LD+ Q + + G + I
Sbjct: 493 DDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQ-VYAMGTADPSH-DI 550
Query: 255 IWEPFLVEG----VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP 307
+ P +EG V ++ACGF H VL + + G GQLG + P
Sbjct: 551 VRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMP 607
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 51/183 (27%), Positives = 80/183 (43%)
Query: 31 SFGDGSQGA-LGLPTSLTGVGGDAYEPTRVPG-LPSDVTSVSAGHYHSLAVTNNGAVWAW 88
S GDG G + S + + D++ P + + D S+S G +++ VT G +++W
Sbjct: 264 SIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSW 323
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKR 148
G + +LG G PK ++ + V A + A+ G L+ WG
Sbjct: 324 GEESGGRLGHGVCSYVP---HPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDH 380
Query: 149 --GQLGLGKDITEAIVPSRVEA-LAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
G LGLG + P R+ + G + +S G H T +GKLF +G DG G
Sbjct: 381 NAGLLGLGSGASHW-KPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFG---DGTFG 436
Query: 206 NLG 208
LG
Sbjct: 437 ALG 439
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 194 (73.4 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 51/162 (31%), Positives = 88/162 (54%)
Query: 49 VGGDAYEPTRVPGLPSDV--TSVSAGHY--HSLAVTNNGAVWAWGRNNEVQLGRGALESR 104
+G + + P R G SDV + V +G HSL +T G +W+WGRN++ QLG G +
Sbjct: 105 LGQNLWGPHRY-GCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRL 163
Query: 105 ATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPS 164
PK +EGL + + AA + A+ ++G+++ +G++K GQLG G + P+
Sbjct: 164 EA---PKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPA 220
Query: 165 RVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
++ G+ IVKV+ G ++ G L+ +G G++G+
Sbjct: 221 TIQ-YNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGH 261
Score = 44 (20.5 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCG-SNVYGQLG 297
G ++ +ACG S+++ + +S G S +G+LG
Sbjct: 402 GWKIRSLACG-KSSIIVAADDSTISWGPSPTFGELG 436
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 184 (69.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 61/192 (31%), Positives = 88/192 (45%)
Query: 28 AVVSFGDGSQGALGLPT-SLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVW 86
AV+S+G G Q LG + G +P R GLP + + AG +HS AV +G V+
Sbjct: 304 AVLSWGSGQQNQLGRRIIERNKLNG--LQP-REFGLPKGIVHIGAGAFHSFAVHQSGKVF 360
Query: 87 AWGRNN--EVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
AWG N+ E + A +S A P V+ L + NV S A DG VWG
Sbjct: 361 AWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQICGGAHHSIAATQDGECLVWG 420
Query: 145 KSKRGQLGLGKDIT--EAIVPSR-------VE--ALAGEKIVKVSFGWGHALAQTEDGKL 193
+ Q GL D +A++ +E A+ G K V+ G H++A G+
Sbjct: 421 RLDGYQTGLKIDTLPDDAVIKDERDRPRILIEPTAVPGIKAKAVAAGSDHSIAIDTSGRP 480
Query: 194 FGWGYSADGRIG 205
+ WG+SA + G
Sbjct: 481 WSWGFSATYQTG 492
Score = 164 (62.8 bits), Expect = 4.9e-13, Sum P(3) = 4.9e-13
Identities = 48/167 (28%), Positives = 81/167 (48%)
Query: 56 PTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEG 115
P +P L + + G H LA+ + GAV +WG + QLGR +E R G
Sbjct: 277 PKLLPDLKK-IKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFG 335
Query: 116 LDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGK---DITEAIV-PSRVEALAG 171
L + + A S A+ G ++ WG + G+ G+ + D AIV P+ V++L+
Sbjct: 336 LPK-GIVHIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSK 394
Query: 172 EKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDS 218
+ + ++ G H++A T+DG+ WG DG G +++ P D+
Sbjct: 395 KNVTQICGGAHHSIAATQDGECLVWG-RLDGY--QTGLKIDTLPDDA 438
Score = 145 (56.1 bits), Expect = 8.6e-11, Sum P(3) = 8.6e-11
Identities = 46/159 (28%), Positives = 74/159 (46%)
Query: 56 PTRVPG--LPSD--VTSVSAGHYHSLAVTNNGAVWAWG--RNNEVQLGRGALESRATWND 109
PT +P P + V+AG S A+T+ G V+ WG R+N+ LG A T
Sbjct: 219 PTAIPSSAFPHGTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQT--T 276
Query: 110 PKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLG---LGKDITEAIVPSRV 166
PK + L ++ + V+ A+ D G++ WG ++ QLG + ++ + P
Sbjct: 277 PKLLPDLKKIKHLVCGDNHVL--ALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREF 334
Query: 167 EALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
G IV + G H+ A + GK+F WG ++ G G
Sbjct: 335 GLPKG--IVHIGAGAFHSFAVHQSGKVFAWGLNSFGETG 371
Score = 96 (38.9 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 26/69 (37%), Positives = 35/69 (50%)
Query: 33 GDGSQGALGLPTSLTGVGGDAYEPTRVPGL-PSDV--TSVSAGHYHSLAVTNNGAVWAWG 89
G+GS G LGL + D P P L P DV V+ G H +A+T++ V WG
Sbjct: 116 GEGSSGELGLGVGKNVI--DVKRPRLNPHLLPDDVGVVQVAVGGMHCVALTHDNKVLTWG 173
Query: 90 RNNEVQLGR 98
N++ LGR
Sbjct: 174 VNDQGALGR 182
Score = 90 (36.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 129 VVSSAIGDDGSLWVWGKSKRGQLGLG--KDITEAIVPSRVEALAGEKI--VKVSFGWGHA 184
V+++A +++V G+ G+LGLG K++ + P L + + V+V+ G H
Sbjct: 101 VINNAPTAKLNVYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAVGGMHC 160
Query: 185 LAQTEDGKLFGWGYSADGRIG 205
+A T D K+ WG + G +G
Sbjct: 161 VALTHDNKVLTWGVNDQGALG 181
Score = 85 (35.0 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 28/100 (28%), Positives = 45/100 (45%)
Query: 121 VCAAFASGVVSS-AIGDDGSLWVWG--KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
V A+G SS A+ D+G ++ WG +S G LG P + L +KI +
Sbjct: 232 VIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDL--KKIKHL 289
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLD 217
G H LA + G + WG ++G + +E + L+
Sbjct: 290 VCGDNHVLALNDKGAVLSWGSGQQNQLGR--RIIERNKLN 327
Score = 80 (33.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR---EKQDM-GMFPVDINFHP--VSIS 318
++ + CG +H L L G +LS GS QLGR E+ + G+ P + V I
Sbjct: 285 KIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGLPKGIVHIG 344
Query: 319 SGLGHSLAI 327
+G HS A+
Sbjct: 345 AGAFHSFAV 353
Score = 74 (31.1 bits), Expect = 4.9e-13, Sum P(3) = 4.9e-13
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 246 MEKEKYMP-IIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQD 302
++ E+ P I+ EP V G++ +A G DHS+ + +G S G + Q G+ QD
Sbjct: 440 IKDERDRPRILIEPTAVPGIKAKAVAAGSDHSIAIDTSGRPWSWGFSATYQTGQGTQD 497
Score = 41 (19.5 bits), Expect = 4.9e-13, Sum P(3) = 4.9e-13
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 29 VVSFGDGSQGALGLPTSLTG 48
V+++G QGALG T+ G
Sbjct: 169 VLTWGVNDQGALGRDTTWEG 188
Score = 41 (19.5 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 316 SISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNVPL--VVEG--LEGE 371
++++G HS+AI T G SWG++ + Q G+ D+V + V+E + G+
Sbjct: 463 AVAAGSDHSIAID-------TSGRPW--SWGFSATYQTGQGTQDDVEVATVIENTAVRGK 513
Query: 372 S 372
S
Sbjct: 514 S 514
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 187 (70.9 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 54/181 (29%), Positives = 94/181 (51%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V++ G G G LGL ++ + +P V +P DV AG H++ ++ +G V+++
Sbjct: 37 VLTLGQGDVGQLGLGENVM----ERKKPALV-SIPEDVVQAEAGGMHTVCLSKSGQVYSF 91
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG--KS 146
G N+E LGR + P +VE L Q V A ++A+ DDG +++WG +
Sbjct: 92 GCNDEGALGRDT-SVEGSEMVPGKVE-L-QEKVVQVSAGDSHTAALTDDGRVFLWGSFRD 148
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
G +GL + + +++VP +V+ +VKV+ G H + T DG L+ G G++G
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR 206
Query: 207 L 207
+
Sbjct: 207 V 207
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 179 (68.1 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 51/181 (28%), Positives = 94/181 (51%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V++ G G G LGL ++ + +P V +P D+ AG H++ ++ +G V+++
Sbjct: 37 VLTLGQGDVGQLGLGENVM----ERKKPALV-SIPEDIVQAEAGGMHTVCLSKSGQVYSF 91
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG--KS 146
G N+E LGR + P +V+ L Q V A ++A+ +DG +++WG +
Sbjct: 92 GCNDEGALGRDT-SVEGSEMVPGKVD-L-QEKVIQVSAGDSHTAALTEDGRVFLWGSFRD 148
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
G +GL + + +++VP +V+ +VKV+ G H + T DG L+ G G++G
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQLSV--PVVKVASGNDHLVMLTVDGDLYTLGSGEQGQLGR 206
Query: 207 L 207
+
Sbjct: 207 V 207
Score = 145 (56.1 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 56/214 (26%), Positives = 96/214 (44%)
Query: 19 IFMRSASGTAVVSFGDGSQGALG-LPTSLTGVGG-DAYEPTRVPGLPSDVTSVSAGH--- 73
+ M + G + + G G QG LG +P GG E VP + S GH
Sbjct: 184 LVMLTVDGD-LYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRF 242
Query: 74 -------YHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL-DQVNVCAAF 125
Y + A+++ G V+ +G +N QLG ES P+ + + F
Sbjct: 243 QDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFV---PQNLTSFKNSTKSWVGF 299
Query: 126 ASGVVSSAIGD-DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
+ G + D +G + G+++ G+LGLG+ E VP+ + L V G+A
Sbjct: 300 SGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIPRLPTVSSVACGASVGYA 359
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGKALES-SPLD 217
+ T+DG++F WG + ++G G+ ++ SP++
Sbjct: 360 V--TKDGRVFAWGMGTNYQLGT-GQDEDAWSPVE 390
Score = 123 (48.4 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 41/131 (31%), Positives = 65/131 (49%)
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T G V G+ + QLG G E+ P V + + ++ A A G+ + + G
Sbjct: 32 TEPGVVLTLGQGDVGQLGLG--ENVMERKKPALVS-IPE-DIVQAEAGGMHTVCLSKSGQ 87
Query: 140 LWVWGKSKRGQLGLGKDITEA-IVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGY 198
++ +G + G LG + + +VP +V+ EK+++VS G H A TEDG++F WG
Sbjct: 88 VYSFGCNDEGALGRDTSVEGSEMVPGKVDLQ--EKVIQVSAGDSHTAALTEDGRVFLWGS 145
Query: 199 SAD--GRIGNL 207
D G IG L
Sbjct: 146 FRDNNGVIGLL 156
Score = 56 (24.8 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 27/94 (28%), Positives = 37/94 (39%)
Query: 267 VDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR-EKQDMGMFPVDINFHPVSISSGLGHSL 325
V + G H++ + G S G YG+LG E + P I P S G S+
Sbjct: 297 VGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIPRLPTVSSVACGASV 356
Query: 326 AICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPD 359
VT R + +WG + QLG G D
Sbjct: 357 GYA------VTKDGR-VFAWGMGTNYQLGT-GQD 382
Score = 53 (23.7 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 242 VSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQ 301
+ EG E EK +P + P L V +ACG + ++G + + G QLG +
Sbjct: 328 LGEGAE-EKSVPTLI-PRLPT---VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQD 382
Query: 302 DMGMFPVDI------NFHPVSISSGLGHSLAI 327
+ PV++ N +++SSG H++ +
Sbjct: 383 EDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
Score = 49 (22.3 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 15/61 (24%), Positives = 24/61 (39%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGH 323
V D CG + + G + G + Y QLG + + P ++ S S +G
Sbjct: 240 VRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFVPQNLTSFKNSTKSWVGF 299
Query: 324 S 324
S
Sbjct: 300 S 300
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 153 (58.9 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 54/182 (29%), Positives = 81/182 (44%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V S G+ + G G + ++++ R+ V V G HSL +T+ G V++
Sbjct: 196 VFSMGNNAYGQCGRNVVENEIYSESHKVNRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSC 255
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEG-LDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
G + Q G G + + P ++ G L VNV G A+ +G L+ WG S+
Sbjct: 256 GWGADGQTGLGHYDITSV---PTKLGGDLAGVNVVQVATYGDCCLAVSAEGGLFGWGNSE 312
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFGWGYSADGRIG 205
QL D T+ VP R +G VK + G G A+ E G +F WGY G+
Sbjct: 313 YLQLASVTDSTQVNVP-RCLPFSGVGKVKQAACGGTGCAVLNGE-GHVFVWGYGILGKGP 370
Query: 206 NL 207
NL
Sbjct: 371 NL 372
Score = 149 (57.5 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 54/155 (34%), Positives = 74/155 (47%)
Query: 55 EPTRVPGLPSD------VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWN 108
EP+ VP LP D V VS G HSL +T+ V++ G N Q GR +E+
Sbjct: 161 EPSPVP-LPLDRPQETRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSE 219
Query: 109 DPK--RVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGK-DITEAIVPSR 165
K R++ D V S + D G ++ G GQ GLG DIT VP++
Sbjct: 220 SHKVNRMQDFDG-QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITS--VPTK 276
Query: 166 VEA-LAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+ LAG +V+V+ LA + +G LFGWG S
Sbjct: 277 LGGDLAGVNVVQVATYGDCCLAVSAEGGLFGWGNS 311
Score = 130 (50.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 53/194 (27%), Positives = 87/194 (44%)
Query: 29 VVSFGDGSQGALGLPT-SLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHS--LAVTNNGAV 85
V S G G+ G GL +T V PT++ G + V V Y LAV+ G +
Sbjct: 252 VYSCGWGADGQTGLGHYDITSV------PTKLGGDLAGVNVVQVATYGDCCLAVSAEGGL 305
Query: 86 WAWGRNNEVQLGRGALESRATWNDPKRV--EGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
+ WG + +QL ++ N P+ + G+ +V A +G + + +G ++VW
Sbjct: 306 FGWGNSEYLQLA--SVTDSTQVNVPRCLPFSGVGKVKQAACGGTGC--AVLNGEGHVFVW 361
Query: 144 GKSKRGQLGLGKDITEA----IVPSRVEALA----GEKIVKVSFGWGHALAQTEDGKLFG 195
G G LG G ++ E ++P + L G + + G H A T G+LF
Sbjct: 362 GY---GILGKGPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLSHFAALTSKGELFV 418
Query: 196 WGYSADGRIGNLGK 209
WG + G +G +G+
Sbjct: 419 WGKNIRGCLG-IGR 431
Score = 86 (35.3 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP--VDINFHPVSISSG 320
GV V I CG H L G L G N+ G LG + + FP V + PV ++ G
Sbjct: 394 GVHVSHIWCGLSHFAALTSKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEPVDVACG 453
Query: 321 LGHSLAICE 329
+ H + + +
Sbjct: 454 VDHMVTLAK 462
Score = 84 (34.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 18/46 (39%), Positives = 23/46 (50%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
+VV + CG DHSL L G + SCG GQ G D+ P +
Sbjct: 232 QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPTKL 277
Score = 77 (32.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 34/109 (31%), Positives = 50/109 (45%)
Query: 110 PKRVEGLDQVNVCAAFASG--VVSSAIGDDGSLWVWGKSKRGQLGLG---KDITEAI--- 161
P R+E LDQ AA G ++SS D +W G +K QLG KD T
Sbjct: 101 PYRLE-LDQKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSHKDKTRGYEYV 159
Query: 162 -----VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
VP ++ ++++VS G H+L T+ +F G +A G+ G
Sbjct: 160 LEPSPVPLPLDRPQETRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCG 208
Score = 62 (26.9 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 245 GMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGV 284
G +++Y P W + G E VD+ACG DH + L ++ V
Sbjct: 430 GRLEDQYFP--WR-VTMPG-EPVDVACGVDHMVTLAKSFV 465
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 172 (65.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 50/167 (29%), Positives = 74/167 (44%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V+S G S G LG+P P + V ++AG H++A T +G V+ W
Sbjct: 8 VLSCGSNSFGQLGVPHGPRR----CVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQW 63
Query: 89 GRNNEVQLGRGALESRA-----TWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
G GR + T +P RV GL+ A S+++ D G ++VW
Sbjct: 64 G-TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVW 122
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEA--LAGEKIVKVSFGWGHALAQT 188
G +K GQL + VP ++EA EK+ + GW H +AQT
Sbjct: 123 GSNKHGQLA--NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQT 167
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 139 (54.0 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 36/123 (29%), Positives = 65/123 (52%)
Query: 48 GVG-GDAY--EPTRVPGL-PSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEV-QLGRGALE 102
GV GD + EP VP L ++ +S G H+L ++++G +++WG +N QLG G +
Sbjct: 18 GVNQGDKHIIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHG--D 75
Query: 103 SRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG------DDGSLWVWGKSKRGQLGLGKD 156
S+ + PK ++ + + + VS+ + D GS++ WG + GQL LG+
Sbjct: 76 SKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALGQP 135
Query: 157 ITE 159
+ +
Sbjct: 136 VNK 138
Score = 136 (52.9 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 97 GRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKR-GQLGLGK 155
GRG + +P V L++ N+ + + D G L+ WG S GQLG G
Sbjct: 16 GRGVNQGDKHIIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGD 75
Query: 156 DITEAIVP------SRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGK 209
+ P S ++AL+G+ +++VS G T+ G ++ WG + +G++ LG+
Sbjct: 76 SKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLA-LGQ 134
Query: 210 ALESSPLDSN 219
+ + ++N
Sbjct: 135 PVNKNEKENN 144
Score = 112 (44.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 46/188 (24%), Positives = 85/188 (45%)
Query: 34 DGSQGA-LGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNN 92
+ +GA LG +S T ++ T P+ ++S S+ S A TNN +
Sbjct: 281 NNKRGATLGSLSSSTTTSNNSTPNTTANNSPNLLSSSSSS---SSAATNNELKFKQTTPT 337
Query: 93 EVQLGRGALESR---ATWNDPKRVEGLDQVNVCAAFASGVVSS---AIGDDGSLWVWGKS 146
+V G+ ++ N+ ++ DQ+N S+ A+ D ++ WG +
Sbjct: 338 KVLSFGGSNDNNFLGGVINNELQMM-TDQMNSIKIIQISCGSNHILALSDQYHVYSWGSA 396
Query: 147 KRGQLGLGKDITEAIV-------PSRVEALA--GEKIVKVSFGWGHALAQTEDGKLFGWG 197
+ G+LG G+D + P ++++L G ++ VS G+ H +A T D + WG
Sbjct: 397 EHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSGILTWG 456
Query: 198 YSADGRIG 205
+DG++G
Sbjct: 457 KGSDGQLG 464
Score = 89 (36.4 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 36/147 (24%), Positives = 67/147 (45%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAY---EPTRVPGLPSD---VTSVSAGHYHSLAVTNN 82
V S+G G LG + V + P ++ L V SVS+G+ H +A+T +
Sbjct: 390 VYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLD 449
Query: 83 GAVWAWGRNNEVQLGRGALESRATWN--DPKRVEGLDQ--VNVCAAFASGVVSSAIGDDG 138
+ WG+ ++ QLG G W+ + KRV ++ V +C + + + +
Sbjct: 450 SGILTWGKGSDGQLGTGFRHD--IWSPFEIKRVIDKNEKIVQICCGYFNSFFITL--EKR 505
Query: 139 SLWVWGKSKRGQLGLGKDITEAIVPSR 165
L+ +G S + LGK + ++P++
Sbjct: 506 ELYQFGWS----IPLGKS-DDILIPTK 527
Score = 80 (33.2 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 24/78 (30%), Positives = 35/78 (44%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG----REKQDMGMF-------PVDINFHP 314
+ I+ G+ H+L+L NG LS G +GQLG D F P + +
Sbjct: 566 IKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYFV 625
Query: 315 VSISSGLGHSLAICEVRS 332
S+ G HS+AI R+
Sbjct: 626 ESVQCGRWHSVAIVSNRN 643
Score = 77 (32.2 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 28/100 (28%), Positives = 44/100 (44%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR--EKQDMGMFPVDINFHPVSIS 318
+ ++++ I+CG +H L L + S GS +G+LG + + P IN P I
Sbjct: 366 MNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWIN-SPKKIK 424
Query: 319 SGLGHSLAICEVRSSNVTGGA----RGIVSWGWNRSSQLG 354
S + + V S A GI++WG QLG
Sbjct: 425 SLQEKGVTVISVSSGYSHCMALTLDSGILTWGKGSDGQLG 464
Score = 68 (29.0 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 173 KIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
KI+++S G H LA ++ ++ WG + G++G+
Sbjct: 370 KIIQISCGSNHILALSDQYHVYSWGSAEHGKLGH 403
Score = 67 (28.6 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 26/81 (32%), Positives = 38/81 (46%)
Query: 23 SASGTAVVSFGDG-SQGALGLPTSLTGVGG--DAYEPTRVPGLPSD-VTSVSAGHYHSLA 78
S SG + S+G S G LG S G + + + + L D V VS G +
Sbjct: 54 SDSGD-LYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFV 112
Query: 79 VTNNGAVWAWGRNNEVQLGRG 99
+T+ G+++ WG N E QL G
Sbjct: 113 LTDQGSIYNWGSNIEGQLALG 133
Score = 64 (27.6 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 173 KIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSN 219
+I ++S G+ H L E+G+ G G G LG L+ S +D +
Sbjct: 565 RIKQISSGYSHTLILNENGECLSIG---QGEFGQLGIPLDHSSIDKD 608
Score = 48 (22.0 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 243 SEGMEKEKYMPIIWEPFLVEGV-----EVVDIACGFDHSLVL 279
S+G + IW PF ++ V ++V I CG+ +S +
Sbjct: 459 SDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYFNSFFI 500
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 149 (57.5 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 39/116 (33%), Positives = 65/116 (56%)
Query: 98 RGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS---AIGDDGSLWVWGKSKRGQLGLG 154
+GA+E P R+ L VN+ A+G S A+ +G + WG++++GQLG G
Sbjct: 37 KGAMEGNLV--SPTRLRPLVGVNI-RFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHG 93
Query: 155 KDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKA 210
D+ + P+ V L+ KIVK + G H + ++DG+ G+G++ G++G LG A
Sbjct: 94 -DMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLG-LGSA 147
Score = 146 (56.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 49/178 (27%), Positives = 86/178 (48%)
Query: 51 GDAYEPTRV-PGLPSDVTSVSAG--HYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATW 107
G+ PTR+ P + ++ V+ G +H +A+ G + WGRN + QLG G + R
Sbjct: 42 GNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQR--- 98
Query: 108 NDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLG--KD--ITEAIVP 163
+ P V GL + + A A + + DDG +G +K GQLGLG K+ ++ +
Sbjct: 99 DRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVES 158
Query: 164 SRVEALAGEKIVKVSFGWGHA--LAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSN 219
+ + + +++ V+ G L+ TE + G G++G+ G E + DS+
Sbjct: 159 TPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGH-GTDNEFNMKDSS 215
Score = 134 (52.2 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 53/201 (26%), Positives = 86/201 (42%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGD-----AYE----PTRVPGLPSD-VTS 68
+++ S G ++++ G G LG T D AYE P + L + +
Sbjct: 180 VWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVK 239
Query: 69 VSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC---AAF 125
V+ G H++AV NG V+ WG +LG E + W P+R++ + NV A
Sbjct: 240 VACGTNHTVAVDKNGYVYTWGFGGYGRLGHR--EQKDEWA-PRRIDVFQRNNVLPPNAIL 296
Query: 126 ASGVVSSAI-GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
++G +SA G L++WGK K G D + P + L+G + + G H
Sbjct: 297 SAGSANSACTAGGGQLYMWGKIKNN----GDDW---MYPKPMMDLSGWNLRWMDSGSMHH 349
Query: 185 LAQTEDGKLFGWGYSADGRIG 205
D WG++ G +G
Sbjct: 350 FVGA-DSSCISWGHAQYGELG 369
Score = 113 (44.8 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 86 WAWGRNNEVQLG--RGALESRATWNDPKRVEGLDQV-NV-CAAFASGVVSSAIGDDGSLW 141
+ W + ++ LG + S + P D+V NV C A + +SS G S+
Sbjct: 134 FGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEG--ASIL 191
Query: 142 VWGKSKRGQLGLGKD----ITEAIV---------PSRVEALAGEKIVKVSFGWGHALAQT 188
G + GQLG G D + ++ V P + +LAGE IVKV+ G H +A
Sbjct: 192 TAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVD 251
Query: 189 EDGKLFGWGYSADGRIGNLGKALESSP 215
++G ++ WG+ GR+G+ + E +P
Sbjct: 252 KNGYVYTWGFGGYGRLGHREQKDEWAP 278
Score = 86 (35.3 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG-REKQD 302
G +V +ACG +H++ + +NG + + G YG+LG RE++D
Sbjct: 234 GETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKD 274
Score = 64 (27.6 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 10/20 (50%), Positives = 17/20 (85%)
Query: 260 LVEGVEVVDIACGFDHSLVL 279
++EG+ V+ +ACGF HS+V+
Sbjct: 386 MLEGMHVMGVACGFCHSMVI 405
Score = 51 (23.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 272 GFDHSLVLGRNGVLLSCGSNVYGQLGR----EKQDMGMFPVDI--NFHPVSISSGLGHSL 325
G H V G + +S G YG+LG +K VD+ H + ++ G HS+
Sbjct: 345 GSMHHFV-GADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSM 403
Query: 326 AICE 329
I +
Sbjct: 404 VIVD 407
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 186 (70.5 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 44/133 (33%), Positives = 76/133 (57%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
HSL +T G +W+WGRN + QLG G +++ P+ +EGL + +A + A+
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHG--DTKRV-EAPRLIEGLSHEVIVSAACGRNHTLAL 217
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALA-GEKIVKVSFGWGHALAQTEDGKL 193
+ GS++ +G++K GQLGLG T+A VPS + + G+ I K++ G ++ G L
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQ-TDA-VPSPAQIMYNGQPITKMACGAEFSMIMDCKGNL 275
Query: 194 FGWGYSADGRIGN 206
+ +G G++G+
Sbjct: 276 YSFGCPEYGQLGH 288
Score = 104 (41.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/103 (33%), Positives = 50/103 (48%)
Query: 56 PTRVPGLPSDV-TSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P + GL +V S + G H+LA+T G+V+A+G N QLG G ++ A P +
Sbjct: 193 PRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGN-QTDAV---PSPAQ 248
Query: 115 GLDQVNVCAAFASGVVSSAIGD-DGSLWVWGKSKRGQLGLGKD 156
+ A G S I D G+L+ +G + GQLG D
Sbjct: 249 IMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSD 291
Score = 63 (27.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/150 (22%), Positives = 55/150 (36%)
Query: 143 WGKSKRGQLGLGKDITEAIVPSRVEAL--AGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
WG G+LG + E +VP V+ G ++ G+ + A +E G LF WG +
Sbjct: 354 WGFGGYGRLGHAEQKDE-MVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWGATN 412
Query: 201 DGRIGNL-GKALES-------SPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYM 252
R + KA++ S + G K K
Sbjct: 413 TSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSS 472
Query: 253 PIIWEPFLVEGVEVVDIACGFDHSLVLGRN 282
E ++G+ +A G+ HSLV+ R+
Sbjct: 473 TAAQEVKTLDGIFSEQVAMGYSHSLVIARD 502
Score = 43 (20.2 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 19/77 (24%), Positives = 31/77 (40%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCG-SNVYGQLG----REKQDMGMFPVDI--NFHPV 315
G + +ACG S+++ + +S G S +G+LG + K V
Sbjct: 429 GWRIRSLACG-KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSE 487
Query: 316 SISSGLGHSLAICEVRS 332
++ G HSL I S
Sbjct: 488 QVAMGYSHSLVIARDES 504
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 171 (65.3 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 56/193 (29%), Positives = 94/193 (48%)
Query: 22 RSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTR---VPGLPSDVTSVSAGHYHSLA 78
R+ G +V G+G G LGL G D E R V G+P D +SAG H+L
Sbjct: 38 RTVLGNVLVC-GNGDVGQLGL-------GEDILERKRLSPVAGIP-DAVDISAGGMHNLV 88
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG 138
+T +G ++++G N+E LGR E + + P ++ L +C + A S+ + +DG
Sbjct: 89 LTKSGDIYSFGCNDEGALGRDTSEDGSE-SKPDLID-LPGKALCIS-AGDSHSACLLEDG 145
Query: 139 SLWVWG--KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGW 196
++ WG + G +GL D + P ++ + G ++ G H + T GK+F
Sbjct: 146 RVFAWGSFRDSHGNMGLTIDGNKR-TP--IDLMEGTVCCSIASGADHLVILTTAGKVFTV 202
Query: 197 GYSADGRIGNLGK 209
G + G++G L +
Sbjct: 203 GCAEQGQLGRLSE 215
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 55/187 (29%), Positives = 86/187 (45%)
Query: 29 VVSFGDGSQGALGLPT--SLTGVG--G--DAYEPTR-VPGLPSDVTSVSAGHYHS-LAVT 80
V + G QG LG + S++G G G D PT+ + ++ A +Y + + +
Sbjct: 199 VFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRES 258
Query: 81 NNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSL 140
+WA G NN QL + + P + E D ++ V+ + D
Sbjct: 259 QTQVIWATGLNNFKQLAHET-KGKEFALTPIKTELKDIRHIAGGQHHTVILTT---DLKC 314
Query: 141 WVWGKSKRGQLGLG--KDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGY 198
V G+ + G+LGLG KD+ E P+ V+ L EKIV V G + A T DGKL+ WG
Sbjct: 315 SVVGRPEYGRLGLGDVKDVVEK--PTIVKKLT-EKIVSVGCGEVCSYAVTIDGKLYSWGS 371
Query: 199 SADGRIG 205
+ ++G
Sbjct: 372 GVNNQLG 378
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 48/174 (27%), Positives = 76/174 (43%)
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAG-EKIVKVSFGWGHALAQTEDGKLFGW 196
G++ V G GQLGLG+DI E R+ +AG V +S G H L T+ G ++ +
Sbjct: 42 GNVLVCGNGDVGQLGLGEDILER---KRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSF 98
Query: 197 GYSADGRIGN--LGKALESSP--LDSNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKY- 251
G + +G +G ES P +D + ++ + G ++ +
Sbjct: 99 GCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHG 158
Query: 252 -MPIIWE-----PF-LVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
M + + P L+EG IA G DH ++L G + + G GQLGR
Sbjct: 159 NMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGR 212
Score = 60 (26.2 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 31/125 (24%), Positives = 56/125 (44%)
Query: 254 IIWEPFLVEGV--EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI- 310
++ +P +V+ + ++V + CG S + +G L S GS V QLG D + P+ +
Sbjct: 333 VVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVV 392
Query: 311 --NF---HPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGP-DNVPLV 364
N H + S G H++ + + + VS G + S+ + P DNV
Sbjct: 393 SKNTQGKHMLLASGGGQHAIFLVKADKQDQKENVPVKVS-GSSSISKKDKTPPQDNVDKE 451
Query: 365 VEGLE 369
E ++
Sbjct: 452 AENVD 456
Score = 59 (25.8 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 33/112 (29%), Positives = 51/112 (45%)
Query: 258 PFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR-EKQDMGMFPVDIN-FHPV 315
P E ++ IA G H+++L + G YG+LG + +D+ P +
Sbjct: 287 PIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEK 346
Query: 316 SISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG-RMGPDNV-PLVV 365
+S G G EV S VT + + SWG ++QLG G D + P+VV
Sbjct: 347 IVSVGCG------EVCSYAVTIDGK-LYSWGSGVNNQLGVGDGDDELEPIVV 391
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 183 (69.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 44/133 (33%), Positives = 74/133 (55%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
HSL +T G +W+WGRN + QLG G +++ P+ +E L + A + A+
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHG--DTKRV-EAPRLIEALSHEAIVLAACGRNHTLAL 215
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALA-GEKIVKVSFGWGHALAQTEDGKL 193
D GS++ +G++K GQLGLG T+A VPS + + G+ I K++ G ++ G L
Sbjct: 216 TDTGSVFAFGENKMGQLGLGNQ-TDA-VPSPAQIMYNGQPITKMACGAEFSMLMDCKGNL 273
Query: 194 FGWGYSADGRIGN 206
+ +G G++G+
Sbjct: 274 YSFGCPEYGQLGH 286
Score = 43 (20.2 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 19/77 (24%), Positives = 31/77 (40%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCG-SNVYGQLG----REKQDMGMFPVDI--NFHPV 315
G + +ACG S+++ + +S G S +G+LG + K V
Sbjct: 427 GWRIRSLACG-KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSE 485
Query: 316 SISSGLGHSLAICEVRS 332
++ G HSL I S
Sbjct: 486 QVAMGYSHSLVIARDES 502
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 144 (55.7 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 43/164 (26%), Positives = 72/164 (43%)
Query: 50 GGDAYEPTRVPGLPSDVTS--VSAGHYHSLAVTNNGAVWAW-----GRNNEVQLGRGALE 102
GG P ++ + S ++ V AG+ H VT ++ W G QLG G
Sbjct: 363 GGGKSTPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG--- 419
Query: 103 SRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDI-TEAI 161
RA++ PK VE L + + I D+G L+ +G G +G+ K +E +
Sbjct: 420 DRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVL 479
Query: 162 VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
P +++ + +VS G H T + +++ WG GR+G
Sbjct: 480 EPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLG 523
Score = 140 (54.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 57/207 (27%), Positives = 90/207 (43%)
Query: 10 NHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS--DVT 67
NHV VLT R+ V ++G G G LGL + D Y P +V +P ++
Sbjct: 500 NHVAVLT-----RNRE---VYTWGCGEYGRLGLDSE-----EDHYTPQKVD-VPKTLNIV 545
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALES----RATWNDPKRVEGLDQVNVCA 123
SV G + +T G V A G N +LG S T+ + L +
Sbjct: 546 SVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLS 605
Query: 124 AFASGVVS------SAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
+ +S ++I + G L +G +K GQLG+G + L G+++++V
Sbjct: 606 FYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAGPLGGKQVIRV 665
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRI 204
S G +A T+D +F WG +GR+
Sbjct: 666 SCGDEFTIAATDDNHIFAWGNGGNGRL 692
Score = 94 (38.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 32/116 (27%), Positives = 58/116 (50%)
Query: 247 EKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF 306
E++ Y P + + + + +V + CG D + +L + G +L+CG N + +LG + G+
Sbjct: 527 EEDHYTP--QKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGII 584
Query: 307 PVDINFH-PVSISSGLGHSLAICEVR--SSNVTGGA----RG-IVSWGWNRSSQLG 354
D P + S L L+ ++R S T A RG ++++G N+ QLG
Sbjct: 585 NHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLG 640
Score = 87 (35.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 34/108 (31%), Positives = 47/108 (43%)
Query: 115 GLDQVNVCAAFASGVVSSAIGDDGSLWVW-----GKSKRGQLGLGKDITEAIVPSRVEAL 169
G VCA V + + L+ W G GQLG G D P VE L
Sbjct: 378 GCSARQVCAGNTHFAVVTV---EKELYTWVNMQGGTKLHGQLGHG-DRASYRQPKHVEKL 433
Query: 170 AGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLD 217
G+ I +VS G + T++G+L+ +G G IG + KA S L+
Sbjct: 434 QGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIG-IDKAYGSEVLE 480
Score = 38 (18.4 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 7/34 (20%), Positives = 19/34 (55%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQL 296
G +V+ ++CG + ++ + + + G+ G+L
Sbjct: 659 GKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 692
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 163 (62.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 51/162 (31%), Positives = 80/162 (49%)
Query: 28 AVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVW 86
A+++FG G G G G D PT V L + V+AG +H+ +++G V+
Sbjct: 331 ALLTFGWGLYGQCG-----QGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVY 385
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEG--LDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
A+G N QLG G ++ PK +E L+ VNV ++ I D+G ++ WG
Sbjct: 386 AFGGNQFGQLGTGCDQAETL---PKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWG 442
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVK-VSFGWGHAL 185
+K GQLG+G D+ + P+ V + K ++ GW H L
Sbjct: 443 WNKYGQLGIG-DVIDRNAPAEVRIK--DCFPKNIACGWWHTL 481
Score = 156 (60.0 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 46/160 (28%), Positives = 85/160 (53%)
Query: 62 LPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV 121
L S V ++ G HS +T+ GA+ +G Q G+G+ + + P V L + +
Sbjct: 309 LGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELS---PTCVSSLLGIRI 365
Query: 122 CAAFASGVV-SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKI-VK-VS 178
A+G+ ++ DG ++ +G ++ GQLG G D E + P +EA E + VK +S
Sbjct: 366 -EEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETL-PKLLEAPNLENVNVKTIS 423
Query: 179 FGWGHALAQTEDGKLFGWGYSADGRIGNLGKALE-SSPLD 217
G H T++G++F WG++ G++G +G ++ ++P +
Sbjct: 424 CGARHTAVITDEGRVFCWGWNKYGQLG-IGDVIDRNAPAE 462
Score = 140 (54.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 60/214 (28%), Positives = 98/214 (45%)
Query: 21 MRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAV 79
M +A ++++G S LG +G G+ EP +P P V AG H +AV
Sbjct: 77 MATAESGKLITWG--STDDLGQSYVTSGKHGETPEPFPLP--PEVCVQKAEAGWAHCVAV 132
Query: 80 TNNGAVWAWGRNNEVQLGR--GALESRATWNDPKRVE-GLDQVNVCAAF--ASGVVSSAI 134
T N V+ WG + GR G ++ + + + +QV+ + +SG SS +
Sbjct: 133 TENQQVYTWGWRECIPTGRVFGQVDGDSC---ERNISFSTEQVSSSSQGKKSSGGTSSQV 189
Query: 135 GDDGSLWVWGK-SKRGQLGLGKDITE----------AIVPSRVEALAGEKIVKVSFGWGH 183
G G+ +K+ ++ K E + +P V G +IV V+ G H
Sbjct: 190 EGRGG----GEPTKKRRISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRH 245
Query: 184 ALAQTEDGKLFGWGYSADGRIGNLGKA--LESSP 215
LA ++ G+++GWGY +G++G LG L SSP
Sbjct: 246 TLALSDIGQVWGWGYGGEGQLG-LGSRVRLVSSP 278
Score = 90 (36.7 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 38/113 (33%), Positives = 52/113 (46%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSG 320
V G V IACG HS V+ G LL+ G +YGQ G+ D D P +SS
Sbjct: 308 VLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTD------D-ELSPTCVSSL 360
Query: 321 LGHSLAICEVRSS---NVTGGARG-IVSWGWNRSSQLGRMGPDNVPLVVEGLE 369
LG + I EV + + G + ++G N+ QLG G D + + LE
Sbjct: 361 LG--IRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGT-GCDQAETLPKLLE 410
Score = 89 (36.4 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 24/95 (25%), Positives = 40/95 (42%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI---NFHPVSISS 319
G+ + ++A G H+ +G + + G N +GQLG P + N V++ +
Sbjct: 362 GIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKT 421
Query: 320 GLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
C R + V + WGWN+ QLG
Sbjct: 422 ------ISCGARHTAVITDEGRVFCWGWNKYGQLG 450
Score = 80 (33.2 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 19/77 (24%), Positives = 33/77 (42%)
Query: 119 VNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVS 178
V + + A G + A+ D G +W WG GQLGLG + P + + K +
Sbjct: 234 VRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKAT 293
Query: 179 FGWGHALAQTEDGKLFG 195
+ + + G++ G
Sbjct: 294 SSGVNMSSVVQCGRVLG 310
Score = 46 (21.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 8/14 (57%), Positives = 13/14 (92%)
Query: 268 DIACGFDHSLVLGR 281
+IACG+ H+L+LG+
Sbjct: 472 NIACGWWHTLLLGQ 485
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 132 (51.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 51/178 (28%), Positives = 76/178 (42%)
Query: 43 PTSLTGVGGDAYEPTRVPGLP---SDVTSVSAGHYHSLAVTNNGAVWAWGR--NNEVQLG 97
P + G G R GLP ++V V+AG VT + A + LG
Sbjct: 294 PPLVPGSTGSRTSSARCRGLPMLNTEVVQVAAGRTQKAGVTRCLPLPAPSPVPSQAPPLG 353
Query: 98 RGA---LESRATWNDPKRV----EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQ 150
G L P+ V EG V + + ++ + D G + +G G
Sbjct: 354 AGGGALLPGAIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGC 413
Query: 151 LGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
LG G + + P+ VEAL G ++V+V+ G H LA + + +LF WG GR+G LG
Sbjct: 414 LGHGS-LNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLG-LG 469
Score = 115 (45.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 49/187 (26%), Positives = 79/187 (42%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
+++FG GS G LG G D +PT V L ++ V+ G H LA++ ++A
Sbjct: 403 IMTFGSGSNGCLG-----HGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFA 457
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WGR + +LG G ES G + V S ++ + G G ++
Sbjct: 458 WGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTV---PGQALACGSNR 514
Query: 148 RGQLGL-----GKD------ITEAIV--PSRVEALAGEKIVKVSFGWGHALAQTE-DGKL 193
+LGL G++ + EA+ P L E ++ V G H+ A T G
Sbjct: 515 FNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDC 574
Query: 194 FGWGYSA 200
+ +G +A
Sbjct: 575 YTFGSNA 581
Score = 102 (41.0 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM-FPVDIN-FHPVSIS 318
++G+++ +ACG ++ +G G + S G G+LGR+ +D G+ PV ++ HP +++
Sbjct: 594 LQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRPVQLDETHPYTVT 653
Query: 319 S-GLGHSLAICEVRSSNVTG 337
S H + VR G
Sbjct: 654 SVSCCHGNTLLAVRRPEWVG 673
Score = 87 (35.7 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD-------INFHPV 315
G E + CG D S++L G L+CGSN + +LG + +G P + F P+
Sbjct: 485 GQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPL 544
Query: 316 SISSGLGH----SLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNVPLVVEGLEG 370
S+ L S+ + S+ VT + ++G N + ++ R P V+GL+G
Sbjct: 545 G-SAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSN-ARRVSR-----APCRVQGLQG 596
Score = 45 (20.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 338 GARG-IVSWGWNRSSQLGRMGPD-NVPLVVE 366
GA G + SWG +LGR D +P V+
Sbjct: 613 GAEGEVFSWGKGARGRLGRKDEDAGLPRPVQ 643
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 153 (58.9 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 50/157 (31%), Positives = 77/157 (49%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V SVS G H+L +T+ +++ G N QLG +E+ P V+ L + NV
Sbjct: 76 VVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLG---IENVVDSAVPLPVDTLSKFNVIKIK 132
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITE--AIVPSRV------EALAGEKIVK- 176
A VS+AI + G L+ WG S GQLG GK + + P+ + +A + I +
Sbjct: 133 AGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQN 192
Query: 177 -----VSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
+ FG H +A + G +F WG + G++G LG
Sbjct: 193 LQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLG-LG 228
Score = 129 (50.5 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 42/145 (28%), Positives = 75/145 (51%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAA 124
++ +S G HS A+ NN + WG EV + + W +RV V+V
Sbjct: 34 NLDQLSMGPNHSAAIVNNECLM-WG---EVMGRKHTTLFKIVWK--RRV-----VSVSCG 82
Query: 125 FASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
F ++ ++ + ++ G ++ GQLG+ +++ ++ VP V+ L+ ++K+ G +
Sbjct: 83 FNHTLLLTS---EYKIFSMGFNQTGQLGI-ENVVDSAVPLPVDTLSKFNVIKIKAGNNVS 138
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGK 209
A TE G L+ WG SA G++GN GK
Sbjct: 139 AAITEAGDLYCWGSSAYGQLGN-GK 162
Score = 106 (42.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
+ S G G LG+ + D+ P V L +V + AG+ S A+T G ++
Sbjct: 95 IFSMGFNQTGQLGIENVV-----DSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYC 149
Query: 88 WGRNNEVQLGRGALESR----------------ATWNDPKRVEGLDQVNVCAAFASGVVS 131
WG + QLG G + ++ A +DP + L N+C A +
Sbjct: 150 WGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPI-YQNLQYTNICFG-AQHTI- 206
Query: 132 SAIGDDGSLWVWGKSKRGQLGLG 154
AI G+++ WG ++ GQLGLG
Sbjct: 207 -AISTTGAIFSWGSNQYGQLGLG 228
Score = 91 (37.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 260 LVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISS 319
+ + ++ +I G H++ + G + S GSN YGQLG + + PV I+ S
Sbjct: 189 IYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDN-SFER 247
Query: 320 GLGHSLAICEVRSSNVT 336
GH ++ E+ +++ T
Sbjct: 248 RAGHINSLGEIVTTDFT 264
Score = 89 (36.4 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 20/33 (60%), Positives = 22/33 (66%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
VVDIACG HS +L G L GSN YGQLG+
Sbjct: 272 VVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQ 304
Score = 61 (26.5 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESS 214
+V ++ G H+ T +G LF WG + G++G G +L+ S
Sbjct: 272 VVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQ-GDSLDQS 311
Score = 54 (24.1 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+E V++ +A G +H+++L + + + GSN + QLG
Sbjct: 320 LEFVKINRMALGNNHTILLTKEQDVFTFGSNEFYQLG 356
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 345 WGWNRSSQLGRMGP--DNVPLVVEG 367
WG N+ QLG+ +VP V+G
Sbjct: 294 WGSNQYGQLGQGDSLDQSVPKTVKG 318
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 162 (62.1 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 48/165 (29%), Positives = 72/165 (43%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V+S G S G LG+P P + V ++AG H++A T +G V+ W
Sbjct: 8 VLSCGSNSFGQLGVPHGPRR----CVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQW 63
Query: 89 GRNNEVQLGRGALESRA-----TWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
G GR + T +P RV GL+ A S+++ D G ++VW
Sbjct: 64 G-TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVW 122
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEA--LAGEKIVKVSFGWGHALA 186
G +K GQL + VP ++EA EK+ + GW H +A
Sbjct: 123 GSNKHGQLA--NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 165
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 164 (62.8 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 58/196 (29%), Positives = 91/196 (46%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDA--YEPTRVPGLPSD---VTSVSAGHYHSL 77
S SG + S+GDG L G G D + P RV G P + V SV+ G +HS
Sbjct: 319 STSGD-LFSWGDGIHNV-----GLLGHGSDISHWIPKRVSG-PLEGLQVLSVACGTWHSA 371
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV-CAAFASGVVSSAIGD 136
T NG ++ +G LG G ES + + + + GL V V C+ + + + +G
Sbjct: 372 LATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQ 431
Query: 137 DGS------LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTED 190
+ L+ WG + +LG G T ++P+ V +L K++ G +A T
Sbjct: 432 TATSMSSRKLFTWGDGDKNRLGHGNKETY-LLPTCVSSLIDYNFHKIACGHTFTVALTTS 490
Query: 191 GKLFGWGYSADGRIGN 206
G +F G +A G++GN
Sbjct: 491 GHVFTMGGTAHGQLGN 506
Score = 160 (61.4 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 53/158 (33%), Positives = 75/158 (47%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--- 121
DV + G H VT G V+ WG +LG G + + PK VE L N+
Sbjct: 252 DVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGI---QVDISRPKLVEFLALTNIDFV 308
Query: 122 -CAAFASGVVSSAIGDDGSLWVWGKSKR--GQLGLGKDITEAIVPSRVEA-LAGEKIVKV 177
C + + VVS++ G L+ WG G LG G DI+ I P RV L G +++ V
Sbjct: 309 ACGEYHTCVVSTS----GDLFSWGDGIHNVGLLGHGSDISHWI-PKRVSGPLEGLQVLSV 363
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
+ G H+ T +GKLF +G A G +G+ + S P
Sbjct: 364 ACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYP 401
Score = 150 (57.9 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 63/197 (31%), Positives = 93/197 (47%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP-SDVTSVSAGHYHSLAVTNNGAVWA 87
V ++G+ G LG G+ D P V L +++ V+ G YH+ V+ +G +++
Sbjct: 272 VFTWGEEVGGRLG-----HGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFS 326
Query: 88 WGR--NNEVQLGRGALESRATWNDPKRVEG-LDQVNVCAAFASGVVSSAIGD-DGSLWVW 143
WG +N LG G+ S W PKRV G L+ + V + A G SA+ +G L+ +
Sbjct: 327 WGDGIHNVGLLGHGSDISH--WI-PKRVSGPLEGLQVLSV-ACGTWHSALATANGKLFTF 382
Query: 144 GKSKRGQLGLGKDITEAI-VPSRVEALAGEKIVKVSFGWGHALA------QTEDG----K 192
G G LG G E++ P V++L G K VKV+ H A QT K
Sbjct: 383 GDGAFGVLGHGN--RESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRK 440
Query: 193 LFGWGYSADGRIGNLGK 209
LF WG R+G+ K
Sbjct: 441 LFTWGDGDKNRLGHGNK 457
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 50/198 (25%), Positives = 88/198 (44%)
Query: 21 MRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT-SVSAGHYHSLAV 79
+ +A+G + +FGDG+ G LG G P V L T V+ +H+ A+
Sbjct: 372 LATANGK-LFTFGDGAFGVLG-----HGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAI 425
Query: 80 T----------NNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGV 129
++ ++ WG ++ +LG G ++ T+ P V L N
Sbjct: 426 VEVMGQTATSMSSRKLFTWGDGDKNRLGHG---NKETYLLPTCVSSLIDYNFHKIACGHT 482
Query: 130 VSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVE-ALAGEKIVKVSFGWGHALAQT 188
+ A+ G ++ G + GQLG I++ +P V+ L GE + +++ G H T
Sbjct: 483 FTVALTTSGHVFTMGGTAHGQLG--NSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLT 540
Query: 189 EDGKLFGWGYSADGRIGN 206
++F WG A+GR+G+
Sbjct: 541 SRSEVFTWGKGANGRLGH 558
Score = 128 (50.1 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 31/115 (26%), Positives = 55/115 (47%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN----FHPVS 316
+EG++V+ +ACG HS + NG L + G +G LG ++ +P ++ V
Sbjct: 355 LEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVK 414
Query: 317 ISSGLGHSLAICEVRSSNVTG-GARGIVSWGWNRSSQLGRMGPDN--VPLVVEGL 368
++ + H+ AI EV T +R + +WG ++LG + +P V L
Sbjct: 415 VACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSL 469
Score = 79 (32.9 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 29/120 (24%), Positives = 51/120 (42%)
Query: 91 NNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVS-SAIGDD---GSLWVWGKS 146
N++V RG + +T D R+ + C++ SG ++GD G +W G
Sbjct: 169 NSDVGYERGNMLRPST--DGFRIS-VSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGIL 225
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
G T+ + P +E+ + ++ G H T G++F WG GR+G+
Sbjct: 226 PDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH 285
Score = 75 (31.5 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 29/107 (27%), Positives = 46/107 (42%)
Query: 269 IACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVS-----ISSGLGH 323
IACG ++ L +G + + G +GQLG D G P + V I+ G H
Sbjct: 477 IACGHTFTVALTTSGHVFTMGGTAHGQLGNSISD-GKLPCLVQDRLVGEFVEEIACG-AH 534
Query: 324 SLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--VPLVVEGL 368
+A+ RS + +WG + +LG ++ P +VE L
Sbjct: 535 HVAVLTSRSE--------VFTWGKGANGRLGHGDTEDKRTPTLVEAL 573
Score = 66 (28.3 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 252 MPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN 311
+P + + LV G V +IACG H VL + + G G+LG + P +
Sbjct: 513 LPCLVQDRLV-GEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVE 571
Query: 312 F----HPVSISSGLGHSLAIC 328
H S+S G + +IC
Sbjct: 572 ALRDRHVKSLSCGSNFTSSIC 592
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 162 (62.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 55/183 (30%), Positives = 81/183 (44%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYE-PTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWA 87
V S+G G G LG + E P + G + V+AG YHSLAV+++G+VW
Sbjct: 37 VYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWC 96
Query: 88 WGRNNEVQLG------------RGALE---SRATWNDPKRVEGLDQVNVCAAFASGVVSS 132
WG N QLG + E S ++ ND R G D + VC A ++S
Sbjct: 97 WGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSLNDSGREVGSD-LKVCTVKAGSMMSL 155
Query: 133 AIGDDGSLWVWGK--SKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTED 190
AI + G LW+WG + + T +P + G ++KV+ G H +A
Sbjct: 156 AIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGP 215
Query: 191 GKL 193
G +
Sbjct: 216 GDI 218
Score = 155 (59.6 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 36/111 (32%), Positives = 57/111 (51%)
Query: 62 LPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRAT---WNDPKRVEGLDQ 118
L + S++AG H++A+T +G V++WGR +LG G P + EG D+
Sbjct: 14 LSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEG-DR 72
Query: 119 VNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEAL 169
+ + A S A+ DDGS+W WG + GQLG D ++ P ++ L
Sbjct: 73 IRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGF--DGENSLAPCLIKNL 121
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 48/169 (28%), Positives = 77/169 (45%)
Query: 10 NHVNVLTSRIFMRSASGTAVV-SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--V 66
+H +LT R + G ++ +FG G G LG ++ + EP V LP +
Sbjct: 273 HHTALLTYR--KETPKGPSICWTFGFGENGQLGHRSNKSS---SLPEP--VSDLPEHAYL 325
Query: 67 TSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWND---PKRVEG-----LDQ 118
SV G +H+ V++ G VW+WG + L + D P+++ G D
Sbjct: 326 VSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSSRFRDP 385
Query: 119 VNVCAAFASGVVSSAIGDDG-SLWVWGKSKRGQLGLGKDITEAIVPSRV 166
V V A V+ + D G LW WG+ + G LG G ++++ VP+ V
Sbjct: 386 VQVSCGAAHTVL---VVDGGYKLWSWGRGRNGVLGTG-NVSDCYVPTLV 430
Score = 128 (50.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 124 AFASGVVSS-AIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVE---ALAGEKI--VKV 177
+ A+G + A+ DG ++ WG+ G+LG GK+ E +VP VE G++I V V
Sbjct: 20 SLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDE-LVPVLVEFPNQAEGDRIRIVGV 78
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRIG 205
+ G H+LA ++DG ++ WGY+ G++G
Sbjct: 79 AAGAYHSLAVSDDGSVWCWGYNIYGQLG 106
Score = 104 (41.7 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 245 GMEKEKYMPIIWE-PFLVEG--VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQ 301
G E ++ +P++ E P EG + +V +A G HSL + +G + G N+YGQLG + +
Sbjct: 51 GKESDELVPVLVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGE 110
Query: 302 DMGMFPVDIN--FHPVSISSGL-------GHSLAICEVRSSNVTGGARGIVS--WGW 347
+ + P I F + SS L G L +C V++ ++ A V W W
Sbjct: 111 N-SLAPCLIKNLFERETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMW 166
Score = 76 (31.8 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 173 KIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPL 216
KI+ ++ G H +A T DG ++ WG GR+G GK ES L
Sbjct: 17 KIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGT-GK--ESDEL 57
Score = 64 (27.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 29/109 (26%), Positives = 41/109 (37%)
Query: 263 GVEVVDIACGFDHSLVLGRN-------GVLLSCGSNVYGQLGREKQDMGMFPVDINFHP- 314
G+ V DIACG H+ +L + + G GQLG P ++ P
Sbjct: 262 GLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPE 321
Query: 315 ----VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPD 359
VS+ GL H+ + + G V W W LG + PD
Sbjct: 322 HAYLVSVDCGLFHTSVV----------SSEGYV-WSWGMERGLG-LCPD 358
Score = 56 (24.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 35/124 (28%), Positives = 53/124 (42%)
Query: 252 MPIIWEPFL-VEGVEVVDIACGFDHSLVLGRNG-----------VLLSCGSNVYGQLGRE 299
+PI + P L G V+ +ACG +H + L G VL S G+N +GQLG
Sbjct: 185 IPIPF-PILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLG 243
Query: 300 KQDMGMFPVDIN-FHPVS------ISSGLGHSLAICEVRSSNVTGGARGIVSW--GWNRS 350
+ P + F+ S I+ G H+ A+ R G + + W G+ +
Sbjct: 244 DGESRARPQTVETFNQKSGLTVYDIACGAHHT-ALLTYRKETPKGPS---ICWTFGFGEN 299
Query: 351 SQLG 354
QLG
Sbjct: 300 GQLG 303
Score = 53 (23.7 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 28/107 (26%), Positives = 45/107 (42%)
Query: 260 LVEGVEVVDIACGFDHSLVLGRNGVLLSCGSN----VYGQLGREKQDMG--MFPVDIN-- 311
L E +V + CG H+ V+ G + S G + + + + G P I+
Sbjct: 319 LPEHAYLVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGG 378
Query: 312 ---FH-PVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
F PV +S G H++ + V GG + + SWG R+ LG
Sbjct: 379 SSRFRDPVQVSCGAAHTVLV-------VDGGYK-LWSWGRGRNGVLG 417
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 180 (68.4 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 80/314 (25%), Positives = 129/314 (41%)
Query: 62 LP-SDVTSVSAGHY-HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE-GLDQ 118
LP SD TS+S+ Y HS N + WG N QLG G S AT PKR+ G
Sbjct: 27 LPYSDSTSISSPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAAT---PKRLRLGFAT 83
Query: 119 VNV-CAAFASGVVSSAIGDDGS-LWVWGKSKRGQLGLGK-DITEAIVPSRVEALAGEKIV 175
+ A AS ++ A D+ S + WG + GQ+G + + P ++ G +
Sbjct: 84 YSSGFATGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGGA-VQ 142
Query: 176 KVSFGWGHALAQTEDGKLFGWGYSADGRIG-N-LGKALESSP--------------LDSN 219
+V+ G H++A G ++ WG ++ G++ N + A +P + +
Sbjct: 143 QVAAGGLHSMALA-GGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAG 201
Query: 220 XXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVL 279
A + G +MP + L + + I+ G H+L L
Sbjct: 202 GSHSIAYTSTEAYAWGNNASGQLGNGTTLSNHMP--QKVQLPSSITIRKISAGGSHNLAL 259
Query: 280 GRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHP-----VSISSGLGHSLAICEVRSSN 334
G + + GSN YGQLG PV + + + +G HS+A+ +SN
Sbjct: 260 DSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAV----ASN 315
Query: 335 VTGGARGIVSWGWN 348
T + +WG+N
Sbjct: 316 FT-----VYTWGFN 324
Score = 176 (67.0 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 55/203 (27%), Positives = 101/203 (49%)
Query: 25 SGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT--SVSAGHYHSLAVTNN 82
+ T ++G+ + G LG T+L+ + P +V LPS +T +SAG H+LA+ +
Sbjct: 209 TSTEAYAWGNNASGQLGNGTTLSN-----HMPQKVQ-LPSSITIRKISAGGSHNLALDST 262
Query: 83 GAVWAWGRNNEVQLGRGALESRAT---WNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
GA+WAWG N QLG G +++T P V G V FA S A+ + +
Sbjct: 263 GAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDV-----FAGPSHSVAVASNFT 317
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAG------EKIVKVSFGWGHALAQTEDGKL 193
++ WG + G L +G + + P++V + E++V + + + + G +
Sbjct: 318 VYTWGFNTLGLLSVGTT-GDQLSPAQVRDASNVPFTDVERVVLLG-SFFTIVKKNGSGGM 375
Query: 194 FGWGYSADGRIGNLGKALESSPL 216
+ WGY+ G++G+ + ++P+
Sbjct: 376 WAWGYNGYGQLGDGTTSNRTAPV 398
Score = 168 (64.2 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 92/358 (25%), Positives = 143/358 (39%)
Query: 27 TAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVP-GLPSDVTSVSAGHYHSLAVT---NN 82
T + +G+ G LG G A P R+ G + + + G H+LA+ N
Sbjct: 50 TTLAVWGNNESGQLG-----DGTTTSAATPKRLRLGFATYSSGFATGASHTLAIARFDNV 104
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWV 142
V AWG N+ Q+GR + T + P ++ G V A G+ S A+ G++W
Sbjct: 105 SGVRAWGSNSAGQIGRDPA-TVPTSSTPVKIGGFGGA-VQQVAAGGLHSMALAG-GTVWA 161
Query: 143 WGKSKRGQLGLGKDITEA--IVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFGWGY 198
WG + GQL L I+ A P +VE A I + G H++A T + + WG
Sbjct: 162 WGSNSAGQLALNP-ISSATRFAPRQVET-AKLPIAPTAIVAGGSHSIAYTST-EAYAWGN 218
Query: 199 SADGRIGNLGKALESS-P----LDSNXXXXXXXXXXXXXXXX----------XKAQKLVS 243
+A G++GN G L + P L S+ A +
Sbjct: 219 NASGQLGN-GTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLG 277
Query: 244 EGMEKEKYMPIIWEPFLVEGVE-VVDIACGFDHSLVLGRNGVLLSCGSNVYGQL--GREK 300
G + P+ + L GV +D+ G HS+ + N + + G N G L G
Sbjct: 278 NGTTTNQSTPV--QLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTG 335
Query: 301 QDMGMFPV----DINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
+ V ++ F V LG I V+ + G+ G+ +WG+N QLG
Sbjct: 336 DQLSPAQVRDASNVPFTDVERVVLLGSFFTI--VKKN----GSGGMWAWGYNGYGQLG 387
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 180 (68.4 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 80/314 (25%), Positives = 129/314 (41%)
Query: 62 LP-SDVTSVSAGHY-HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE-GLDQ 118
LP SD TS+S+ Y HS N + WG N QLG G S AT PKR+ G
Sbjct: 27 LPYSDSTSISSPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAAT---PKRLRLGFAT 83
Query: 119 VNV-CAAFASGVVSSAIGDDGS-LWVWGKSKRGQLGLGK-DITEAIVPSRVEALAGEKIV 175
+ A AS ++ A D+ S + WG + GQ+G + + P ++ G +
Sbjct: 84 YSSGFATGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSSTPVKIGGFGGA-VQ 142
Query: 176 KVSFGWGHALAQTEDGKLFGWGYSADGRIG-N-LGKALESSP--------------LDSN 219
+V+ G H++A G ++ WG ++ G++ N + A +P + +
Sbjct: 143 QVAAGGLHSMALA-GGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAG 201
Query: 220 XXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVL 279
A + G +MP + L + + I+ G H+L L
Sbjct: 202 GSHSIAYTSTEAYAWGNNASGQLGNGTTLSNHMP--QKVQLPSSITIRKISAGGSHNLAL 259
Query: 280 GRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHP-----VSISSGLGHSLAICEVRSSN 334
G + + GSN YGQLG PV + + + +G HS+A+ +SN
Sbjct: 260 DSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAV----ASN 315
Query: 335 VTGGARGIVSWGWN 348
T + +WG+N
Sbjct: 316 FT-----VYTWGFN 324
Score = 176 (67.0 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 55/203 (27%), Positives = 101/203 (49%)
Query: 25 SGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT--SVSAGHYHSLAVTNN 82
+ T ++G+ + G LG T+L+ + P +V LPS +T +SAG H+LA+ +
Sbjct: 209 TSTEAYAWGNNASGQLGNGTTLSN-----HMPQKVQ-LPSSITIRKISAGGSHNLALDST 262
Query: 83 GAVWAWGRNNEVQLGRGALESRAT---WNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
GA+WAWG N QLG G +++T P V G V FA S A+ + +
Sbjct: 263 GAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDV-----FAGPSHSVAVASNFT 317
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAG------EKIVKVSFGWGHALAQTEDGKL 193
++ WG + G L +G + + P++V + E++V + + + + G +
Sbjct: 318 VYTWGFNTLGLLSVGTT-GDQLSPAQVRDASNVPFTDVERVVLLG-SFFTIVKKNGSGGM 375
Query: 194 FGWGYSADGRIGNLGKALESSPL 216
+ WGY+ G++G+ + ++P+
Sbjct: 376 WAWGYNGYGQLGDGTTSNRTAPV 398
Score = 168 (64.2 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 92/358 (25%), Positives = 143/358 (39%)
Query: 27 TAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVP-GLPSDVTSVSAGHYHSLAVT---NN 82
T + +G+ G LG G A P R+ G + + + G H+LA+ N
Sbjct: 50 TTLAVWGNNESGQLG-----DGTTTSAATPKRLRLGFATYSSGFATGASHTLAIARFDNV 104
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWV 142
V AWG N+ Q+GR + T + P ++ G V A G+ S A+ G++W
Sbjct: 105 SGVRAWGSNSAGQIGRDPA-TVPTSSTPVKIGGFGGA-VQQVAAGGLHSMALAG-GTVWA 161
Query: 143 WGKSKRGQLGLGKDITEA--IVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFGWGY 198
WG + GQL L I+ A P +VE A I + G H++A T + + WG
Sbjct: 162 WGSNSAGQLALNP-ISSATRFAPRQVET-AKLPIAPTAIVAGGSHSIAYTST-EAYAWGN 218
Query: 199 SADGRIGNLGKALESS-P----LDSNXXXXXXXXXXXXXXXX----------XKAQKLVS 243
+A G++GN G L + P L S+ A +
Sbjct: 219 NASGQLGN-GTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLG 277
Query: 244 EGMEKEKYMPIIWEPFLVEGVE-VVDIACGFDHSLVLGRNGVLLSCGSNVYGQL--GREK 300
G + P+ + L GV +D+ G HS+ + N + + G N G L G
Sbjct: 278 NGTTTNQSTPV--QLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTG 335
Query: 301 QDMGMFPV----DINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
+ V ++ F V LG I V+ + G+ G+ +WG+N QLG
Sbjct: 336 DQLSPAQVRDASNVPFTDVERVVLLGSFFTI--VKKN----GSGGMWAWGYNGYGQLG 387
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 47/152 (30%), Positives = 73/152 (48%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV---- 121
V SV+ G +H+ VT++G ++ +G LG G+LES T PK VE L ++ V
Sbjct: 397 VLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLES-VT--KPKEVESLRRMKVISVS 453
Query: 122 CAAFASGVVSSAIGDD--------GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEK 173
C + + + D G L+ WG +G+LG D +VP+ V L
Sbjct: 454 CGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHA-DSKRKLVPTCVTELIDHD 512
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
+KVS GW +A + G ++ G S G++G
Sbjct: 513 FIKVSCGWTLTVALSISGTVYTMGSSIHGQLG 544
Score = 157 (60.3 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 50/164 (30%), Positives = 78/164 (47%)
Query: 52 DAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDP 110
DA P + DV S+S G H+ VT G V+ WG N +LG L+ + P
Sbjct: 279 DALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLG---LKVNIDIDHP 335
Query: 111 KRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALA 170
KRVE L+ V V + S + A+ + G L++WG G + + ++ + + L
Sbjct: 336 KRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDG-GTIE--QSGSQFLTRKISDVLG 392
Query: 171 GE-KIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALES 213
G ++ V+ G H T G+LF +G G +G+ G +LES
Sbjct: 393 GSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGH-G-SLES 434
Score = 149 (57.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 56/197 (28%), Positives = 91/197 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
V +G+G+ G LGL ++ D P RV L V SV+ + + AVT +G ++
Sbjct: 313 VFCWGNGNSGKLGLKVNI-----DIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYL 367
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVE-----GLDQVNV-CAAFASGVVSSAIGDDGSLW 141
WG + G +E + +++ L ++V C A+ + +V+S+ G L+
Sbjct: 368 WG------IDGGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSS----GQLF 417
Query: 142 VWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGH--ALAQTED--------- 190
+G G LG G + P VE+L K++ VS G H A+ +T +
Sbjct: 418 TYGSGTFGVLGHGS-LESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKS 476
Query: 191 -GKLFGWGYSADGRIGN 206
GKLF WG GR+G+
Sbjct: 477 CGKLFTWGDGDKGRLGH 493
Score = 91 (37.1 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 25/96 (26%), Positives = 44/96 (45%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN----FHPVSISSGL 321
V+ +ACG H+ ++ +G L + GS +G LG + P ++ +S+S G
Sbjct: 397 VLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGP 456
Query: 322 GHSLAICEVRSSNVTGGARG---IVSWGWNRSSQLG 354
H+ AI E + A+ + +WG +LG
Sbjct: 457 WHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLG 492
Score = 85 (35.0 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+ +WG + G + K+ +A+ P +E+ + +S G HA T G++F WG
Sbjct: 261 IMIWG-AITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNG 319
Query: 200 ADGRIG 205
G++G
Sbjct: 320 NSGKLG 325
Score = 76 (31.8 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 31/111 (27%), Positives = 59/111 (53%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG--REK-QDMGMFPVDINFHPVS-ISSG 320
+ + ++CG+ ++ L +G + + GS+++GQLG R K + + + ++ V I+SG
Sbjct: 512 DFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASG 571
Query: 321 LGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGP--D-NVPLVVEGL 368
H +A+ + G + +WG + QLG +G D N P++VE L
Sbjct: 572 -SHHVAVL------TSFG--NVYTWGKGMNGQLG-LGDVRDRNSPVLVEPL 612
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 156 (60.0 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 46/155 (29%), Positives = 74/155 (47%)
Query: 56 PTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWND-PKRVE 114
P ++P + + V+ H + V +G+ +AWG QLG ALE+ W P R+E
Sbjct: 445 PIQLPP-KAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEA---WKHYPSRME 500
Query: 115 GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAI-VPSRVEALAGEK 173
+ +V +A A + + GSL G + L LG+D P + LA +
Sbjct: 501 SVRNYHVVSACAGDGFTILVTQAGSLLSCGSN--AHLALGQDEQRNYHSPKLIARLADVR 558
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
+ +V+ G H LA + +G ++ WG S G +G LG
Sbjct: 559 VEQVAAGLQHVLALSREGAVYVWGTSTCGALG-LG 592
Score = 134 (52.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 47/164 (28%), Positives = 84/164 (51%)
Query: 5 KSVVHNHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS 64
K+V+ + V + S + + G+A ++G+G+ G LGL T + + P+R+ + +
Sbjct: 451 KAVIVD-VAMSDSHFVVVNEDGSAY-AWGEGTHGQLGL----TALEAWKHYPSRMESVRN 504
Query: 65 -DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA 123
V S AG ++ VT G++ + G N + LG+ E R ++ PK + L V V
Sbjct: 505 YHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQD--EQR-NYHSPKLIARLADVRV-E 560
Query: 124 AFASGVVSS-AIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV 166
A+G+ A+ +G+++VWG S G LGLG + P ++
Sbjct: 561 QVAAGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKI 604
Score = 74 (31.1 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 269 IACGFDHSLVLGRNGVLLSCGSNVYGQLGREK 300
I CG D S VL NG L CGSN Y +LG ++
Sbjct: 616 IYCGPDTSAVLFANGELHVCGSNDYNKLGFQR 647
Score = 43 (20.2 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 270 AC-GFDHSLVLGRNGVLLSCGSNVYGQLG 297
AC HS+ L G + + G N GQ G
Sbjct: 666 ACFSSTHSVFLVEGGYVYTMGRNAEGQRG 694
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 129 (50.5 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 34/110 (30%), Positives = 55/110 (50%)
Query: 99 GALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDIT 158
GA+E + +EG V + + ++ + D G + +G G LG G +
Sbjct: 366 GAIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGS-LN 424
Query: 159 EAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
+ P+ VEAL G ++V+V+ G H LA + + +LF WG GR+G LG
Sbjct: 425 DISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLG-LG 473
Score = 115 (45.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 49/187 (26%), Positives = 79/187 (42%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
+++FG GS G LG G D +PT V L ++ V+ G H LA++ ++A
Sbjct: 407 IMTFGSGSNGCLG-----HGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFA 461
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WGR + +LG G ES G + V S ++ + G G ++
Sbjct: 462 WGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTV---PGQALACGSNR 518
Query: 148 RGQLGL-----GKD------ITEAIV--PSRVEALAGEKIVKVSFGWGHALAQTE-DGKL 193
+LGL G++ + EA+ P L E ++ V G H+ A T G
Sbjct: 519 FNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDC 578
Query: 194 FGWGYSA 200
+ +G +A
Sbjct: 579 YTFGSNA 585
Score = 105 (42.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 34/140 (24%), Positives = 63/140 (45%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
+ V+ G + +T+ G + +G + LG G+L + + + G + V V A
Sbjct: 388 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQV-ACG 446
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHAL 185
AS V+ A+ + L+ WG+ G+LGLG + P V G++ +V G ++
Sbjct: 447 ASHVL--ALSTERELFAWGRGDGGRLGLGTRESHCC-PQLVPMPPGQEAQRVVCGIDSSM 503
Query: 186 AQTEDGKLFGWGYSADGRIG 205
T G+ G + ++G
Sbjct: 504 ILTVPGQALACGSNRFNKLG 523
Score = 101 (40.6 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM-FPVDIN-FHPVSIS 318
++G+++ +ACG ++ +G G + S G G+LGR+ +D G+ PV ++ HP +++
Sbjct: 598 LQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRPVQLDETHPYTVT 657
Query: 319 S-GLGHSLAICEVR 331
S H + VR
Sbjct: 658 SVSCCHGNTLLAVR 671
Score = 87 (35.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD-------INFHPV 315
G E + CG D S++L G L+CGSN + +LG + +G P + F P+
Sbjct: 489 GQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPL 548
Query: 316 SISSGLGH----SLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNVPLVVEGLEG 370
S+ L S+ + S+ VT + ++G N + ++ R P V+GL+G
Sbjct: 549 G-SAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSN-ARRVSR-----APCRVQGLQG 600
Score = 45 (20.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 338 GARG-IVSWGWNRSSQLGRMGPD-NVPLVVE 366
GA G + SWG +LGR D +P V+
Sbjct: 617 GAEGEVFSWGKGARGRLGRKDEDAGLPRPVQ 647
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 185 (70.2 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 90/343 (26%), Positives = 157/343 (45%)
Query: 36 SQGALGLPTSLTGVGGDAY--EPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNE 93
SQ + LP + GD + +PT P +P+ + + G+ HSLA+T G ++ WG N
Sbjct: 5 SQENISLPQGVLYCWGDKFSGKPTFNPLIPN-ICFMDNGYNHSLALTETGELYGWGDNRH 63
Query: 94 VQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGL 153
QL ++ + + P +++ + V + G S+AI ++G L+VWG G
Sbjct: 64 HQLSSN--KAITSIDKPIKIQVIPNQRVKSISCGGNFSAAIMENGLLYVWGTLIEG---- 117
Query: 154 GKDITEAIVPSRVEALAGEKIVKVSFGWGHA--LAQT----EDGKLFGWGYSADGRIGNL 207
GK TE+ P++V+ L G + VS G H +A + E ++ WG + G++G +
Sbjct: 118 GK-CTES--PTKVDLLKG--VTCVSIGINHCAVVADSPTTPEKRSVYTWGTNRKGQLGVV 172
Query: 208 GKALESSP----LDSNXXXXXXXXXXXXXXXXX---------KAQKLVSEGMEKEKYMPI 254
G ++ ++P L S K++++ S ++ +P+
Sbjct: 173 GDSITNAPRRVTLGSKAISVCCGEEFTAAIVEGNEVFVWGYNKSRQICSNNSDEIISIPV 232
Query: 255 IWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSC--GSNVYGQLGREKQDMGM-FPVDIN 311
+PFL G ++V+++C ++ + R+GV C GSN Q+ R D + FP I
Sbjct: 233 --KPFL--GRDIVELSCTKNY--IAARSGVGNVCVWGSNE--QVCRIGDDKFINFPNKIK 284
Query: 312 FHPVSISSGLGHSLAICEVRSSNVTGGARG-IVSWGWNRSSQL 353
IS+ H L + E +G I SWG + +QL
Sbjct: 285 ----QISASTSHILVLSE----------KGEIFSWGNSEDNQL 313
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 170 (64.9 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 42/133 (31%), Positives = 67/133 (50%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V SAG HSLA +G +++WG +LG G ++S +N P+ ++GL +
Sbjct: 441 VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKS---YNKPQLIKGLRNKRILYVC 497
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALA-GEKIVKVSFGWGHA 184
A S I + +++ WG K +LG G D + P VE L +K+ +SFG ++
Sbjct: 498 AGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNS 557
Query: 185 LAQTEDGKLFGWG 197
LA G ++ WG
Sbjct: 558 LALNVKGDVYVWG 570
Score = 128 (50.1 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 31/104 (29%), Positives = 56/104 (53%)
Query: 109 DPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEA--IVPSRV 166
D G++ VN +GV + + + G L++WG ++ G++GLG D T+ ++P ++
Sbjct: 877 DKGNTNGVNNVNNVNG-VNGVNNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLPRKI 935
Query: 167 EALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKA 210
+ KI K S G H+L T +L+ G + +GR+G K+
Sbjct: 936 NII--NKIYKCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKS 977
Score = 99 (39.9 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 35/118 (29%), Positives = 53/118 (44%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
+ S+G G G LGL G +P + GL + + V AG HS + +N V+
Sbjct: 460 IYSWGYGGNGRLGL-----GNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYT 514
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AIGDDGSLWVWG 144
WG +LG G + + PK VE L+ + G +S A+ G ++VWG
Sbjct: 515 WGNGKFYKLGHGNDDIDIYY--PKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 89 (36.4 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 19/72 (26%), Positives = 42/72 (58%)
Query: 136 DDGSLWVWGKSKRGQLGLGK-DITEAI-VPSRVEALAGEKIVKVSFGWGHALAQTEDGKL 193
+ G ++ G +K G+LG G+ ++ + VP + + KI+K++ G+ + L ++ G +
Sbjct: 769 ESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLN-ICVNKIIKIACGYNYVLCVSDVGLV 827
Query: 194 FGWGYSADGRIG 205
+GWG + ++G
Sbjct: 828 YGWGKNDKSQLG 839
Score = 81 (33.6 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 29/107 (27%), Positives = 47/107 (43%)
Query: 102 ESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAI 161
E W+ K V V C+A + S A G ++ WG G+LGLG +I
Sbjct: 429 EDSIKWDKKKNV-----VIHCSAGSKH--SLACNLHGDIYSWGYGGNGRLGLG-NIKSYN 480
Query: 162 VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
P ++ L ++I+ V G H+ + ++ WG +G+ LG
Sbjct: 481 KPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWG---NGKFYKLG 524
Score = 73 (30.8 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 60 PGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRG 99
P + + +S G H+LA+ G +++WG NN +G G
Sbjct: 345 PKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNG 384
Score = 67 (28.6 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 31/98 (31%), Positives = 48/98 (48%)
Query: 264 VEVVDIACGFDH-SLVLGRNGVLLSCGSNVYGQLGRE----KQDMGMFPVDINFHPVSIS 318
V+++D G DH S+ L +G + + G N G+LG K+ G+ P+ +N I
Sbjct: 754 VKIID---GSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGV-PILLNICVNKII 809
Query: 319 S-GLGHSLAICEVRSSNVTGGARGIV-SWGWNRSSQLG 354
G++ +C S+V G+V WG N SQLG
Sbjct: 810 KIACGYNYVLCV---SDV-----GLVYGWGKNDKSQLG 839
Score = 65 (27.9 bits), Expect = 8.8e-11, Sum P(3) = 8.8e-11
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI-NF-HPVSISSGLG 322
+++ IACG+++ L + G++ G N QLG PV + N + ++I +G
Sbjct: 807 KIIKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTNVINIFAGYD 866
Query: 323 HSLAIC-EVRSSNVTGGARGI 342
HS I ++ T G +
Sbjct: 867 HSACIINKLLDKGNTNGVNNV 887
Score = 60 (26.2 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR-EKQDM 303
++ + G HSL L L CGSN G+LG EK M
Sbjct: 940 KIYKCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKSKM 979
Score = 54 (24.1 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 175 VKVSFGWGH-ALAQTEDGKLFGWGYSADGRIGN 206
VK+ G H ++ E GK++ GY+ +G +GN
Sbjct: 754 VKIIDGSDHFSVFLLESGKVYTAGYNKNGELGN 786
Score = 46 (21.3 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 26 GTAVVSFGDGSQGALG 41
G +V SFG G+ G LG
Sbjct: 97 GCSVYSFGKGNNGLLG 112
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 170 (64.9 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 42/133 (31%), Positives = 67/133 (50%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V SAG HSLA +G +++WG +LG G ++S +N P+ ++GL +
Sbjct: 441 VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKS---YNKPQLIKGLRNKRILYVC 497
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALA-GEKIVKVSFGWGHA 184
A S I + +++ WG K +LG G D + P VE L +K+ +SFG ++
Sbjct: 498 AGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNS 557
Query: 185 LAQTEDGKLFGWG 197
LA G ++ WG
Sbjct: 558 LALNVKGDVYVWG 570
Score = 128 (50.1 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 31/104 (29%), Positives = 56/104 (53%)
Query: 109 DPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEA--IVPSRV 166
D G++ VN +GV + + + G L++WG ++ G++GLG D T+ ++P ++
Sbjct: 877 DKGNTNGVNNVNNVNG-VNGVNNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLPRKI 935
Query: 167 EALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKA 210
+ KI K S G H+L T +L+ G + +GR+G K+
Sbjct: 936 NII--NKIYKCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKS 977
Score = 99 (39.9 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 35/118 (29%), Positives = 53/118 (44%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
+ S+G G G LGL G +P + GL + + V AG HS + +N V+
Sbjct: 460 IYSWGYGGNGRLGL-----GNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYT 514
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AIGDDGSLWVWG 144
WG +LG G + + PK VE L+ + G +S A+ G ++VWG
Sbjct: 515 WGNGKFYKLGHGNDDIDIYY--PKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 89 (36.4 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 19/72 (26%), Positives = 42/72 (58%)
Query: 136 DDGSLWVWGKSKRGQLGLGK-DITEAI-VPSRVEALAGEKIVKVSFGWGHALAQTEDGKL 193
+ G ++ G +K G+LG G+ ++ + VP + + KI+K++ G+ + L ++ G +
Sbjct: 769 ESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLN-ICVNKIIKIACGYNYVLCVSDVGLV 827
Query: 194 FGWGYSADGRIG 205
+GWG + ++G
Sbjct: 828 YGWGKNDKSQLG 839
Score = 81 (33.6 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 29/107 (27%), Positives = 47/107 (43%)
Query: 102 ESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAI 161
E W+ K V V C+A + S A G ++ WG G+LGLG +I
Sbjct: 429 EDSIKWDKKKNV-----VIHCSAGSKH--SLACNLHGDIYSWGYGGNGRLGLG-NIKSYN 480
Query: 162 VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLG 208
P ++ L ++I+ V G H+ + ++ WG +G+ LG
Sbjct: 481 KPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWG---NGKFYKLG 524
Score = 73 (30.8 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 60 PGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRG 99
P + + +S G H+LA+ G +++WG NN +G G
Sbjct: 345 PKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNG 384
Score = 67 (28.6 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 31/98 (31%), Positives = 48/98 (48%)
Query: 264 VEVVDIACGFDH-SLVLGRNGVLLSCGSNVYGQLGRE----KQDMGMFPVDINFHPVSIS 318
V+++D G DH S+ L +G + + G N G+LG K+ G+ P+ +N I
Sbjct: 754 VKIID---GSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGV-PILLNICVNKII 809
Query: 319 S-GLGHSLAICEVRSSNVTGGARGIV-SWGWNRSSQLG 354
G++ +C S+V G+V WG N SQLG
Sbjct: 810 KIACGYNYVLCV---SDV-----GLVYGWGKNDKSQLG 839
Score = 65 (27.9 bits), Expect = 8.8e-11, Sum P(3) = 8.8e-11
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI-NF-HPVSISSGLG 322
+++ IACG+++ L + G++ G N QLG PV + N + ++I +G
Sbjct: 807 KIIKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTNVINIFAGYD 866
Query: 323 HSLAIC-EVRSSNVTGGARGI 342
HS I ++ T G +
Sbjct: 867 HSACIINKLLDKGNTNGVNNV 887
Score = 60 (26.2 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR-EKQDM 303
++ + G HSL L L CGSN G+LG EK M
Sbjct: 940 KIYKCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKSKM 979
Score = 54 (24.1 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 175 VKVSFGWGH-ALAQTEDGKLFGWGYSADGRIGN 206
VK+ G H ++ E GK++ GY+ +G +GN
Sbjct: 754 VKIIDGSDHFSVFLLESGKVYTAGYNKNGELGN 786
Score = 46 (21.3 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 26 GTAVVSFGDGSQGALG 41
G +V SFG G+ G LG
Sbjct: 97 GCSVYSFGKGNNGLLG 112
>UNIPROTKB|G4NDH5 [details] [associations]
symbol:MGG_00913 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR000408 EMBL:CM001235 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
RefSeq:XP_003718048.1 ProteinModelPortal:G4NDH5
EnsemblFungi:MGG_00913T0 GeneID:2674805 KEGG:mgr:MGG_00913
Uniprot:G4NDH5
Length = 578
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 62/183 (33%), Positives = 93/183 (50%)
Query: 10 NHVNVLTS--RIFMRSASGTAVVSFGDGSQGALGLP--TSLTGVGGDAYEPTRVPGLP-S 64
+H +LTS R+F +AS TA S+G LG+P T LT G +P V GLP +
Sbjct: 265 DHCLMLTSHGRVFS-AASSTANYP----SKGQLGIPGLTWLTRPKGPFDQPHEVKGLPPA 319
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE--------GL 116
V+ ++AG+YHSLA+ N + AWG N+ QLG T + PK V G+
Sbjct: 320 GVSQIAAGNYHSLALDKNSNLHAWGDNSSGQLGFEVNPQSPTIDTPKAVPLTRLLTSGGV 379
Query: 117 DQVNVCAAFASG----VVSSAIGDDG----SLWVWGKSKRGQLGLGKDITEAIVPSRVEA 168
+ + + A G +S+I +G W G +G+LG GK I + P++++A
Sbjct: 380 QRSEITSIAAGGSNSFFTTSSIPANGRPTAEAWSCGAGLQGELGNGKWIHMSTAPAKMKA 439
Query: 169 LAG 171
L+G
Sbjct: 440 LSG 442
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 145 (56.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 60/227 (26%), Positives = 102/227 (44%)
Query: 110 PKRVEGLDQVNVCAAFASGVVSSA-IGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA 168
PK VE + A+GV ++A + + G L++WG ++ G+LGLG D + P+RV
Sbjct: 408 PKMVE----IKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLG-DTIDRRTPTRVIR 462
Query: 169 LAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD-GRIGNLGKALE-SSPLDSNXXXXXXX 226
L E + ++ H+ TE GK++ WG S + G+I + L S LD
Sbjct: 463 LKNEVVSTIACSSTHSACYTESGKMYVWGQSDETGKIQAIPSPLPIHSYLDREIKSPNGG 522
Query: 227 XXXXXXXXXXKAQKLVSE----GMEKEKYMPIIWE-PFL-------VEGVEVVDIACGFD 274
K ++L + + +WE P + +E V +I G
Sbjct: 523 GVGGFFGGGGKIKQLACGQRCIAVLTQMGEVFMWEIPGIPIPLRNALENHSVRNIVMGNF 582
Query: 275 HSLVLGRNGVLLSCGSNVYGQLGRE--KQDMGMFPVDINFHPVSISS 319
H + L +G +++ G N GQLGR + + G+ ++F P ++S
Sbjct: 583 HLVCLTDSGEVVTIGRNKTGQLGRTDAENEPGIVK-QLSFDPDGLNS 628
Score = 86 (35.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLG 97
+ V+ G+YH + +T G VW WG N+ QLG
Sbjct: 335 IKQVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
Score = 68 (29.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 19/70 (27%), Positives = 32/70 (45%)
Query: 28 AVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWA 87
+V +FG GS GALGL + + V V+ G YH++ VT++ ++
Sbjct: 2 SVFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYI 61
Query: 88 WGRNNEVQLG 97
G + + G
Sbjct: 62 CGIKKDPKHG 71
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 159 (61.0 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 45/165 (27%), Positives = 75/165 (45%)
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG + GQLG G E P +EAL G ++ +V+ G H++ +E G ++ WG
Sbjct: 178 GQVFSWGAGRHGQLGHGTLEAEP-EPRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWG 236
Query: 198 YSADGRIGNLGKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIWE 257
++ G++ AL + L + + E ++ +
Sbjct: 237 WNESGQL-----ALPTKSLAEDGKTTAGEASGLEEDGSEVKRGSAGEDGAPAPFIAVQPF 291
Query: 258 PFLVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
P L++ G E V ++CG H+ VL R G L + G YGQLG +
Sbjct: 292 PALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHK 336
Score = 124 (48.7 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 28/89 (31%), Positives = 46/89 (51%)
Query: 72 GHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVS 131
G H+L + G V++WG QLG G LE+ +P+ +E L + + A G S
Sbjct: 167 GAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEP---EPRLLEALQGLRMAEVAAGGWHS 223
Query: 132 SAIGDDGSLWVWGKSKRGQLGLG-KDITE 159
+ + G +++WG ++ GQL L K + E
Sbjct: 224 VCLSETGDIYIWGWNESGQLALPTKSLAE 252
Score = 54 (24.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 18/51 (35%), Positives = 24/51 (47%)
Query: 38 GALGLPTSL-TGVGGDAY--EPTRVPGLPSDVTSVSAGHYHSLAVTNNGAV 85
G G +L +G+G + EP R PG V VSA ++ VT G V
Sbjct: 13 GFCGFGQALGSGLGRQVHSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGRV 63
Score = 48 (22.0 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 328 CEVRSSNVTGGARGIVSWGWNRSSQLG 354
C R + V + +WGW + QLG
Sbjct: 308 CGSRHTAVLTRTGELYTWGWGKYGQLG 334
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 139 (54.0 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 61/207 (29%), Positives = 91/207 (43%)
Query: 10 NHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VT 67
NHV VLT R+ V S+G G G LGL + D Y P RV +P +
Sbjct: 488 NHVVVLT-----RNKE---VYSWGCGEYGRLGLDSE-----EDYYTPQRVD-VPKALIIV 533
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLG-----RGALESRATWNDPKRVEGL--DQVN 120
+V G + +T +G V A G N +LG G + A P Q++
Sbjct: 534 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 593
Query: 121 V--CAAFASGVV-SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
A G ++AI + G L +G +K GQLG+G + L G+++++V
Sbjct: 594 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRV 653
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRI 204
S G +A T+D +F WG +GR+
Sbjct: 654 SCGDEFTIAATDDNHIFAWGNGGNGRL 680
Score = 138 (53.6 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 41/164 (25%), Positives = 71/164 (43%)
Query: 50 GGDAYEPTRVPGLPSDVTS--VSAGHYHSLAVTNNGAVWAW-----GRNNEVQLGRGALE 102
GG P ++ + S ++ V AG+ H VT ++ W G QLG G
Sbjct: 351 GGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG--- 407
Query: 103 SRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGK-DITEAI 161
+A++ PK VE L + + + D+G L+ +G G +G+ K E +
Sbjct: 408 DKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVL 467
Query: 162 VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
P ++ + +VS G H + T + +++ WG GR+G
Sbjct: 468 EPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLG 511
Score = 88 (36.0 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 28/98 (28%), Positives = 52/98 (53%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH--PVSISSGLGH 323
+V + CG D + +L ++G +L+CG N + +LG + G+ + +H P + S L
Sbjct: 532 IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEA-YHEVPYTTSFTLAK 590
Query: 324 SLAICEVRS--SNVTGGA----RG-IVSWGWNRSSQLG 354
L+ ++R+ T A RG ++++G N+ QLG
Sbjct: 591 QLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 628
Score = 39 (18.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR---EK---QDM-GMFPVDI--NFH 313
G +V+ ++CG + ++ + + + G+ G+L E+ D+ +P I + H
Sbjct: 647 GKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLH 706
Query: 314 PVSISSGLG-HSLAICE--VRSSNVTGGARGI-VSWGWNRSSQLGRMG 357
V S G H++ I E + S + + G+ + SS GR+G
Sbjct: 707 HVPDLSCRGWHTILIVEKVLNSKTIRSNSSGLSIGTVVQSSSPGGRIG 754
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 138 (53.6 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 41/164 (25%), Positives = 71/164 (43%)
Query: 50 GGDAYEPTRVPGLPSDVTS--VSAGHYHSLAVTNNGAVWAW-----GRNNEVQLGRGALE 102
GG P ++ + S ++ V AG+ H VT ++ W G QLG G
Sbjct: 353 GGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG--- 409
Query: 103 SRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDI-TEAI 161
+A++ PK VE L + + + D+G L+ +G G +G+ K E +
Sbjct: 410 DKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVL 469
Query: 162 VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
P ++ + +VS G H + T + +++ WG GR+G
Sbjct: 470 EPMQLNFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLG 513
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 60/207 (28%), Positives = 91/207 (43%)
Query: 10 NHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VT 67
NHV VLT R+ V S+G G G LGL + D Y P +V +P +
Sbjct: 490 NHVVVLT-----RNKE---VYSWGCGEYGRLGLDSE-----EDYYTPQKVD-VPKALIIV 535
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLG-----RGALESRATWNDPKRVEGL--DQVN 120
+V G + +T +G V A G N +LG G + A P Q++
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLS 595
Query: 121 V--CAAFASGVV-SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
A G ++AI + G L +G +K GQLG+G + L G+++++V
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRV 655
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRI 204
S G +A T+D +F WG +GR+
Sbjct: 656 SCGDEFTIAATDDNHIFAWGNGGNGRL 682
Score = 88 (36.0 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 28/98 (28%), Positives = 52/98 (53%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH--PVSISSGLGH 323
+V + CG D + +L ++G +L+CG N + +LG + G+ + +H P + S L
Sbjct: 534 IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEA-YHEIPYTTSFTLAK 592
Query: 324 SLAICEVRS--SNVTGGA----RG-IVSWGWNRSSQLG 354
L+ ++R+ T A RG ++++G N+ QLG
Sbjct: 593 QLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 38 (18.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 7/34 (20%), Positives = 19/34 (55%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQL 296
G +V+ ++CG + ++ + + + G+ G+L
Sbjct: 649 GKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 138 (53.6 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 41/164 (25%), Positives = 71/164 (43%)
Query: 50 GGDAYEPTRVPGLPSDVTS--VSAGHYHSLAVTNNGAVWAW-----GRNNEVQLGRGALE 102
GG P ++ + S ++ V AG+ H VT ++ W G QLG G
Sbjct: 353 GGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG--- 409
Query: 103 SRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDI-TEAI 161
+A++ PK VE L + + + D+G L+ +G G +G+ K E +
Sbjct: 410 DKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVL 469
Query: 162 VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
P ++ + +VS G H + T + +++ WG GR+G
Sbjct: 470 EPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLG 513
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 60/207 (28%), Positives = 91/207 (43%)
Query: 10 NHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VT 67
NHV VLT R+ V S+G G G LGL + D Y P +V +P +
Sbjct: 490 NHVVVLT-----RNKE---VYSWGCGEYGRLGLDSE-----EDYYTPQKVD-VPKALIIV 535
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLG-----RGALESRATWNDPKRVEGL--DQVN 120
+V G + +T +G V A G N +LG G + A P Q++
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595
Query: 121 V--CAAFASGVV-SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
A G ++AI + G L +G +K GQLG+G + L G+++++V
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRV 655
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRI 204
S G +A T+D +F WG +GR+
Sbjct: 656 SCGDEFTIAATDDNHIFAWGNGGNGRL 682
Score = 88 (36.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 28/98 (28%), Positives = 52/98 (53%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH--PVSISSGLGH 323
+V + CG D + +L ++G +L+CG N + +LG + G+ + +H P + S L
Sbjct: 534 IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEA-YHEVPYTTSFTLAK 592
Query: 324 SLAICEVRS--SNVTGGA----RG-IVSWGWNRSSQLG 354
L+ ++R+ T A RG ++++G N+ QLG
Sbjct: 593 QLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 38 (18.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 7/34 (20%), Positives = 19/34 (55%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQL 296
G +V+ ++CG + ++ + + + G+ G+L
Sbjct: 649 GKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 139 (54.0 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 61/207 (29%), Positives = 91/207 (43%)
Query: 10 NHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VT 67
NHV VLT R+ V S+G G G LGL + D Y P RV +P +
Sbjct: 490 NHVVVLT-----RNKE---VYSWGCGEYGRLGLDSE-----EDYYTPQRVD-VPKALIIV 535
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLG-----RGALESRATWNDPKRVEGL--DQVN 120
+V G + +T +G V A G N +LG G + A P Q++
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595
Query: 121 V--CAAFASGVV-SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
A G ++AI + G L +G +K GQLG+G + L G+++++V
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRV 655
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRI 204
S G +A T+D +F WG +GR+
Sbjct: 656 SCGDEFTIAATDDNHIFAWGNGGNGRL 682
Score = 138 (53.6 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 41/164 (25%), Positives = 71/164 (43%)
Query: 50 GGDAYEPTRVPGLPSDVTS--VSAGHYHSLAVTNNGAVWAW-----GRNNEVQLGRGALE 102
GG P ++ + S ++ V AG+ H VT ++ W G QLG G
Sbjct: 353 GGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG--- 409
Query: 103 SRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGK-DITEAI 161
+A++ PK VE L + + + D+G L+ +G G +G+ K E +
Sbjct: 410 DKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVL 469
Query: 162 VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
P ++ + +VS G H + T + +++ WG GR+G
Sbjct: 470 EPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLG 513
Score = 88 (36.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 28/98 (28%), Positives = 52/98 (53%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH--PVSISSGLGH 323
+V + CG D + +L ++G +L+CG N + +LG + G+ + +H P + S L
Sbjct: 534 IVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEA-YHEVPYTTSFTLAK 592
Query: 324 SLAICEVRS--SNVTGGA----RG-IVSWGWNRSSQLG 354
L+ ++R+ T A RG ++++G N+ QLG
Sbjct: 593 QLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 38 (18.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 7/34 (20%), Positives = 19/34 (55%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQL 296
G +V+ ++CG + ++ + + + G+ G+L
Sbjct: 649 GKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
>UNIPROTKB|H0YE53 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 Ensembl:ENST00000533241 Uniprot:H0YE53
Length = 144
Score = 151 (58.2 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 34/80 (42%), Positives = 46/80 (57%)
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA--LAGEKIVKVSFGWGHALAQTEDGKL 193
D G ++VWG +K GQL + VP ++EA EK+ + GW H +AQTE GK+
Sbjct: 2 DAGEVYVWGSNKHGQLA--NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKM 59
Query: 194 FGWGYSADGRIGNLGKALES 213
F WG AD G LG+ LE+
Sbjct: 60 FTWG-RAD--YGQLGRKLET 76
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 46/148 (31%), Positives = 75/148 (50%)
Query: 56 PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALES-RATWNDPKRV 113
P +VP ++ ++ G H L + G V+AWG + QLGR +E R DP R
Sbjct: 212 PWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDP-RP 270
Query: 114 EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITE-AIV--PSRVEALA 170
GL V A+ + A+ D L WG ++ GQ G+ +D+ + A+V P R+ AL
Sbjct: 271 FGLRHVKYIASGENHCF--ALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRL-ALP 327
Query: 171 GEKIVK-VSFGWGHALAQTEDGKLFGWG 197
+++ ++ G H+L ++DG L+ G
Sbjct: 328 DNVVIRSIAAGEHHSLILSQDGDLYSCG 355
Score = 119 (46.9 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 42/147 (28%), Positives = 71/147 (48%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWG--RNNEVQLG--RGALESRATWNDPKRVEGLDQVNV 121
V ++A S A+ +NG V+AWG R NE LG + ++ + T P +V + N+
Sbjct: 167 VVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKT---PWKVPTFSKYNI 223
Query: 122 CAAFASGVVSSA-IGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALA-GEKIVK-VS 178
A G + ++G ++ WG ++ QLG + + E ++ G + VK ++
Sbjct: 224 -VQLAPGKDHILFLDEEGMVFAWGNGQQNQLG--RKVMERFRLKTLDPRPFGLRHVKYIA 280
Query: 179 FGWGHALAQTEDGKLFGWGYSADGRIG 205
G H A T+D KL WG + G+ G
Sbjct: 281 SGENHCFALTKDNKLVSWGLNQFGQCG 307
Score = 118 (46.6 bits), Expect = 0.00044, P = 0.00043
Identities = 53/193 (27%), Positives = 84/193 (43%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V ++G+G Q LG + +P R GL V +++G H A+T + + +W
Sbjct: 242 VFAWGNGQQNQLGRKV-MERFRLKTLDP-RPFGL-RHVKYIASGENHCFALTKDNKLVSW 298
Query: 89 GRNNEVQLGRGA-LESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI-GDDGSLWVWGKS 146
G N Q G +E A PKR+ D V V + A+G S I DG L+ G+
Sbjct: 299 GLNQFGQCGVSEDVEDGALVTKPKRLALPDNV-VIRSIAAGEHHSLILSQDGDLYSCGRL 357
Query: 147 KRGQLGLGKD-ITE----------AIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
++G+ KD + E VP + K V+ G H++A ++G +
Sbjct: 358 DMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYS 417
Query: 196 WGYSADGRIGNLG 208
WG+ +G LG
Sbjct: 418 WGFGETYAVG-LG 429
Score = 94 (38.1 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 30/106 (28%), Positives = 49/106 (46%)
Query: 110 PKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG--KSKRGQLGLGKD-ITEAIVPSRV 166
P EG V + A + +S A+ +G ++ WG + G LG +D I P +V
Sbjct: 159 PPLAEGHKVVQLAA---TDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKV 215
Query: 167 EALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALE 212
+ IV+++ G H L E+G +F WG ++G K +E
Sbjct: 216 PTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR--KVME 259
Score = 88 (36.0 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 25/84 (29%), Positives = 36/84 (42%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD---VTSVSAGHYHSLAVTNNGAV 85
+ +G GS LGL + P P LP D + S + G H+LA+ V
Sbjct: 48 IFCWGTGSMCELGLGP--LAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNV 105
Query: 86 WAWGRNNEVQLGRGALESRATWND 109
W+WG N+ LGR ++ D
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKD 129
Score = 81 (33.6 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 30/113 (26%), Positives = 46/113 (40%)
Query: 247 EKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDM--- 303
+K K W+ +V +A G DH L L G++ + G+ QLGR+ +
Sbjct: 204 DKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRL 263
Query: 304 -GMFPVDINFHPVS-ISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
+ P V I+SG H A+ + +VSWG N+ Q G
Sbjct: 264 KTLDPRPFGLRHVKYIASGENHCFALTKDNK---------LVSWGLNQFGQCG 307
Score = 77 (32.2 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 260 LVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPV-DIN--FHPVS 316
L + V + IA G HSL+L ++G L SCG ++G K ++ + D++ V
Sbjct: 326 LPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVP 385
Query: 317 ISSGLGHSLAICEVRSSN---VTGGARGIV-SWGWNRSSQLGRMGP 358
+ + L + V + + V GI SWG+ + +G +GP
Sbjct: 386 LPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVG-LGP 430
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 166 (63.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 50/176 (28%), Positives = 84/176 (47%)
Query: 36 SQGALGLPTSLTGVGGDAYEPT----RVPGLPSDVT--SVSAGHYHSLAVTNNGAVWAWG 89
+ G++ S T + D + PT +P LPS ++ V+ H++ +TN+ ++ +G
Sbjct: 434 TSGSMRSSVSFTTLY-DLHVPTITLSSIPDLPSRISIKQVALSKTHTMVLTNDNELFGFG 492
Query: 90 RNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRG 149
N+ QLG G + + VE L ++ + S D G+L +G +K
Sbjct: 493 DNSCGQLGFGKFSKM---ENGRLVESLKGRDIQSVGVGNYFSVICCDRGTLLTFGTAKN- 548
Query: 150 QLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
LGLGKD ++ P +E L E I + G H +A E G+ GWG + G++G
Sbjct: 549 -LGLGKDAKDSAKPMLLEQLLRENIKDIYCGHDHVVAVLESGECLGWGSNQYGQLG 603
Score = 56 (24.8 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 248 KEKYMP--IIWEPFLVEGV--EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
KEK P + +P +++G VVD + G HS V+ +G ++ G N +LG
Sbjct: 680 KEKKTPNDYVNKPTILQGFPERVVDFSVGSYHSGVILESGQVMIFGRNDNTELG 733
Score = 50 (22.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 255 IWEPFLV---EGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF 306
++ PF + ++V G D +++L +G L++ GSN + +L Q +G F
Sbjct: 625 LYGPFQIPMPSNKKIVYGKAGKDATMLLSDDGSLIAMGSNKHNKLNLT-QRVGFF 678
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 178 (67.7 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 73/305 (23%), Positives = 130/305 (42%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAA- 124
+ ++ G +HS + ++G++W +G QLG G + + P RV GL +C
Sbjct: 829 IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGG-RNNSNQLVPTRVNGL----ICKVT 883
Query: 125 -FASGVVSSAI-GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
A G + + D G + V G GQ+G+ DI + + + L ++ ++ +
Sbjct: 884 QIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLP-LGPLRVRDIATHYY 942
Query: 183 HALAQTEDGKLFGWGYSADGRIGNLG--KALESSPLDSNXXXXXXXXXXXXXXXXXKAQK 240
H++ TED ++F WG + + K + S+ L N
Sbjct: 943 HSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQL-KNTEDPSSPSPSTNGSTPRVNLN 1001
Query: 241 LVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREK 300
L +E ++ + + + FL +G +V +ACG HS ++ G L + G + QLG
Sbjct: 1002 LPAEIPREDLGLREV-KHFL-DG-NIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGN 1058
Query: 301 QDMGMFPVDINFHP-----VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGR 355
++ M P + F P V++S G H++A S G + +WG N Q G
Sbjct: 1059 KNERMEPHQV-FEPNGAKWVNVSLGNNHTIA------STDDGS---VFAWGKNDFGQCGV 1108
Query: 356 MGPDN 360
+ N
Sbjct: 1109 LTKKN 1113
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 45/157 (28%), Positives = 81/157 (51%)
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEG----LDQVNVCA 123
+++ G H L ++++G + AWG N Q G G A + +V+G ++++ C
Sbjct: 780 AIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLH---QVDGDWPAIEKI-ACG 835
Query: 124 AFASGVVSSAIGDDGSLWVWGKSKRGQLGLG-KDITEAIVPSRVEALAGEKIVKVSFGWG 182
F S + S DGSLW +G GQLG G ++ + +VP+RV L K+ +++ G
Sbjct: 836 QFHSAFICS----DGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLIC-KVTQIACGRA 890
Query: 183 HALAQTEDGKLFGWGYSADGRIG---NLGKALESSPL 216
H + T+ G++ G + G++G ++ K +PL
Sbjct: 891 HTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPL 927
Score = 133 (51.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/92 (32%), Positives = 46/92 (50%)
Query: 62 LPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV 121
L ++ SV+ G HS +T+ G ++ WG+ + QLG G R + G VNV
Sbjct: 1020 LDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNV 1079
Query: 122 CAAFASGVVSSAIGDDGSLWVWGKSKRGQLGL 153
+ S+ DDGS++ WGK+ GQ G+
Sbjct: 1080 SLGNNHTIAST---DDGSVFAWGKNDFGQCGV 1108
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 127 (49.8 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 40/135 (29%), Positives = 68/135 (50%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V++ G G G LGL ++ + +P V +P DV AG H++ ++ +G V+++
Sbjct: 45 VLTLGQGDVGQLGLGENVM----ERKKPALV-SIPEDVVQAEAGGMHTVCLSKSGQVYSF 99
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKR 148
G N+E LGR + P +VE L Q V A ++A+ DDG +++WG +
Sbjct: 100 GCNDEGALGRDT-SVEGSEMVPGKVE-L-QEKVVQVSAGDSHTAALTDDGRVFLWGSFRH 156
Query: 149 ------GQLGLGKDI 157
+LG GK++
Sbjct: 157 CLFHTSQRLGWGKEV 171
Score = 121 (47.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
H T G V G+ + QLG G E+ P V + + +V A A G+ + +
Sbjct: 35 HRSHSTEPGLVLTLGQGDVGQLGLG--ENVMERKKPALVS-IPE-DVVQAEAGGMHTVCL 90
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEA-IVPSRVEALAGEKIVKVSFGWGHALAQTEDGKL 193
G ++ +G + G LG + + +VP +VE EK+V+VS G H A T+DG++
Sbjct: 91 SKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKVVQVSAGDSHTAALTDDGRV 148
Query: 194 FGWG 197
F WG
Sbjct: 149 FLWG 152
Score = 78 (32.5 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
K G +GL + + +++VP +V+ +VKV+ G H + T DG L+ G G++
Sbjct: 183 KDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQL 240
Query: 205 GNL 207
G +
Sbjct: 241 GRV 243
Score = 69 (29.3 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
V VV +A G DH ++L +G L + G GQLGR
Sbjct: 208 VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR 242
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 164 (62.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 71/272 (26%), Positives = 109/272 (40%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRN 91
FG G G P S G + EP + PG +DV VSA ++ VT A R
Sbjct: 10 FGFGFCGFGQAPGSGRGRQVLSPEPLQTPGSGADVRRVSASWSYTALVTRERPPPALLRP 69
Query: 92 NEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDD-GSLWVWGKSKRGQ 150
G A + P L G + + D+ G ++ WG+ + GQ
Sbjct: 70 GPRVPGAKAPQPALR---PPAPRALAPELRARRLELGAEHALLLDEAGQVFSWGQGRHGQ 126
Query: 151 LGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKA 210
LG G E P +EAL G + +V+ G H++ +E G ++ WG++ G++ A
Sbjct: 127 LGHGSLEAEP-EPRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQL-----A 180
Query: 211 LESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIWEPFLVE---GVEVV 267
L S L + + E ++ I P L++ G +VV
Sbjct: 181 LPSRSLAEDTKTIPREASGLNEDGFEVRRTAKGEDGAPAPFIAIQPFPALLDLPLGADVV 240
Query: 268 DIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
+CG H+ V+ G L + G YGQLG +
Sbjct: 241 KASCGSRHTAVVTGTGELYTWGWGKYGQLGHK 272
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 155 (59.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 52/190 (27%), Positives = 95/190 (50%)
Query: 28 AVVSFGDGSQGALGLPTSLTGVGGD----AYEPTRVPGLP-----SDVTSVSAGHYHSLA 78
++ S+G+G GALG GVG + Y P ++ S + ++ G YHS+
Sbjct: 265 SLYSWGNGYFGALG-----HGVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMF 319
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL-DQV---NVCAAFASGVVSSA- 133
+TN+ ++ +G QLG G ++ + PKR++ D + + FA +S
Sbjct: 320 LTNDNEIYTFGYGEFGQLGHGENDTLNHYI-PKRIKSTGDNAAGNKIKSIFAGDHANSFY 378
Query: 134 IGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKL 193
I DGS++ WG + G LG G + P ++++L+ K K++ G+ H LAQ+ + +
Sbjct: 379 ITTDGSVYSWGWNDGGSLGHGTNENH-YSPKKIQSLSNIK--KITSGFKHTLAQSINNDI 435
Query: 194 FGWGYSADGR 203
+ +G + G+
Sbjct: 436 YVFGDNTFGQ 445
Score = 142 (55.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 39/154 (25%), Positives = 73/154 (47%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGA-LESRATWNDPKRVEGL----DQV 119
D + +G H+L + N+G++++WG LG G + PK++ ++
Sbjct: 246 DFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNES 305
Query: 120 NVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGK-DITEAIVPSRVEAL----AGEKI 174
+ G S + +D ++ +G + GQLG G+ D +P R+++ AG KI
Sbjct: 306 RIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKI 365
Query: 175 VKVSFGWGHALAQ--TEDGKLFGWGYSADGRIGN 206
+ F HA + T DG ++ WG++ G +G+
Sbjct: 366 KSI-FAGDHANSFYITTDGSVYSWGWNDGGSLGH 398
Score = 117 (46.2 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 38/153 (24%), Positives = 72/153 (47%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS---DVTSVSAGHYH 75
I +++ + S G G LG+ S+ + +V + ++ S+ +G+ H
Sbjct: 128 IILQTKDDNQLYSIGKSKYGVLGIGRSIDDDDDNNNNNEKVYKIEKFNDNIISIVSGYEH 187
Query: 76 SLAVTNNGAVWAWGRNNEVQLG-RGALESRATW-NDP-------KRVEGLDQVNVCAAFA 126
SL VT + ++ WGRN++ QLG R ++ +++ + P K ++ L + +
Sbjct: 188 SLVVTKDDGIYGWGRNHKNQLGGRERVKDKSSSPSSPSEDEYYSKPIKVLKETDPIFKDF 247
Query: 127 SGVVSSA-----IGDDGSLWVWGKSKRGQLGLG 154
+ S + +G+DGSL+ WG G LG G
Sbjct: 248 KKICSGSDHNLLLGNDGSLYSWGNGYFGALGHG 280
Score = 117 (46.2 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 39/171 (22%), Positives = 76/171 (44%)
Query: 56 PTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEG 115
P ++ GL + + A YHS + N + WG + + + ++ N+ K++
Sbjct: 66 PIKLNGLKAK--DIFANAYHSGIINENDEFYHWGLYSNLVT---EVPNKIKINNDKKIS- 119
Query: 116 LDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPS-------RVEA 168
NV + + DD L+ GKSK G LG+G+ I + + ++E
Sbjct: 120 ----NV--SLGGNFIILQTKDDNQLYSIGKSKYGVLGIGRSIDDDDDNNNNNEKVYKIEK 173
Query: 169 LAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSN 219
+ I+ + G+ H+L T+D ++GWG + ++G + + S S+
Sbjct: 174 F-NDNIISIVSGYEHSLVVTKDDGIYGWGRNHKNQLGGRERVKDKSSSPSS 223
Score = 93 (37.8 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 39/128 (30%), Positives = 58/128 (45%)
Query: 247 EKEK-YMPIIWEPFLVEGVE--VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDM 303
+KE Y P F + E +VDIACG HS+ L + + + G +GQLG + D
Sbjct: 285 DKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDT 344
Query: 304 GMFPVDINFH-PVSISSGLGHSLAICEVRS------SN----VTGGARGIVSWGWNRSSQ 352
+N + P I S G + A +++S +N T G+ + SWGWN
Sbjct: 345 ------LNHYIPKRIKS-TGDNAAGNKIKSIFAGDHANSFYITTDGS--VYSWGWNDGGS 395
Query: 353 LGRMGPDN 360
LG +N
Sbjct: 396 LGHGTNEN 403
Score = 71 (30.1 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 269 IACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
I G DH+L+LG +G L S G+ +G LG
Sbjct: 250 ICSGSDHNLLLGNDGSLYSWGNGYFGALG 278
Score = 49 (22.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 256 WEPFLVEGVE-VVDIACGFDHSLVLGRNGVLLSCGSNVYGQ 295
+ P ++ + + I GF H+L N + G N +GQ
Sbjct: 405 YSPKKIQSLSNIKKITSGFKHTLAQSINNDIYVFGDNTFGQ 445
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 141 (54.7 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 25/68 (36%), Positives = 45/68 (66%)
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+W WG+ + GQLG G D+ + P V++L G++++KV+ G H+LA T ++F WG +
Sbjct: 551 VWSWGQGQDGQLGHG-DLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCN 609
Query: 200 ADGRIGNL 207
G++G++
Sbjct: 610 TSGQLGHM 617
Score = 112 (44.5 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 53/185 (28%), Positives = 75/185 (40%)
Query: 14 VLTSRIFMRSASGT--AVVSFGDGSQGALG-LPTSLTGVGGDAYEPTRVPGLPSD-VTSV 69
VL SR +++A G V+ G + G LP + EP L V V
Sbjct: 34 VLLSRPVLQAALGARHGVLLVEGGQVYSFGELPWKQNQTS--SAEPILEAVLSEQRVVFV 91
Query: 70 SAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGV 129
+AG HS VT +G V WG N Q G L + +P V LD +
Sbjct: 92 AAGSAHSGVVTEDGGVHMWGENVHGQCG---LLGLSVIPNPTPVGVLDS-EATPPQTVKI 147
Query: 130 VSSAIGDDGSL--------WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGW 181
+ A GD +L W WG QLGL P +V+ L+G +++V+ G
Sbjct: 148 LEVACGDQHTLALSAKHEVWAWGSGC--QLGLNTSTFPVWKPQKVDHLSGRHVLQVACGS 205
Query: 182 GHALA 186
H++A
Sbjct: 206 AHSVA 210
Score = 110 (43.8 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 54/181 (29%), Positives = 84/181 (46%)
Query: 29 VVSFGDG-SQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWA 87
++S G+G S G GL + G P RV L V + G H + + G V++
Sbjct: 4 LISSGEGDSSGERGLLHTWKGYSYST-APERVL-LSRPVLQAALGARHGVLLVEGGQVYS 61
Query: 88 WG----RNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFA-SGVVSSAIGDDGSLWV 142
+G + N+ LE A ++ +RV V V A A SGVV+ +DG + +
Sbjct: 62 FGELPWKQNQTSSAEPILE--AVLSE-QRV-----VFVAAGSAHSGVVT----EDGGVHM 109
Query: 143 WGKSKRGQLGL-GKDITEAIVPSRV---EALAGE--KIVKVSFGWGHALAQTEDGKLFGW 196
WG++ GQ GL G + P V EA + KI++V+ G H LA + +++ W
Sbjct: 110 WGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILEVACGDQHTLALSAKHEVWAW 169
Query: 197 G 197
G
Sbjct: 170 G 170
Score = 79 (32.9 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 23/73 (31%), Positives = 33/73 (45%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP----VDINFHPVS 316
+ G EV+ +A G HSL L + S G N GQLG + FP +
Sbjct: 579 LNGKEVLKVAAGAHHSLALTAQSQVFSWGCNTSGQLGHMESPT-TFPQLTKLSDGIRVWD 637
Query: 317 ISSGLGHSLAICE 329
I +GL H+L + +
Sbjct: 638 IGAGLQHTLLLAD 650
Score = 77 (32.2 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 31/102 (30%), Positives = 43/102 (42%)
Query: 35 GSQGALGLPT--SLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNN 92
G G LGL + T VG E T P + V+ G H+LA++ VWAWG
Sbjct: 116 GQCGLLGLSVIPNPTPVGVLDSEAT--PPQTVKILEVACGDQHTLALSAKHEVWAWGSG- 172
Query: 93 EVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
QLG + W P++V+ L +V S A+
Sbjct: 173 -CQLGLNT-STFPVWK-PQKVDHLSGRHVLQVACGSAHSVAL 211
Score = 59 (25.8 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 315 VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM-GPDNVPLVVEGLEG 370
+ +++G HSLA+ T ++ + SWG N S QLG M P P + + +G
Sbjct: 585 LKVAAGAHHSLAL--------TAQSQ-VFSWGCNTSGQLGHMESPTTFPQLTKLSDG 632
Score = 55 (24.4 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 255 IWEPFLVE---GVEVVDIACGFDHSLVLGR 281
+W+P V+ G V+ +ACG HS+ L R
Sbjct: 184 VWKPQKVDHLSGRHVLQVACGSAHSVALVR 213
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 156 (60.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 49/181 (27%), Positives = 85/181 (46%)
Query: 28 AVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWA 87
+V SFG GS LG + + + G+ + VSAG H++A+ +NG V+
Sbjct: 289 SVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGI--HILRVSAGDEHAVALDSNGRVYT 346
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG+ LG G + T + V VCA V + + G L+ +G
Sbjct: 347 WGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFV---LVEGGLLYGFGWMG 403
Query: 148 RGQLGL-GKDITEAIVPSRV-EALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
G LG + +++ ++ RV E L ++ +VS G H + T+ G++FG+G + ++G
Sbjct: 404 FGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLG 463
Query: 206 N 206
+
Sbjct: 464 H 464
Score = 146 (56.5 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 62/213 (29%), Positives = 99/213 (46%)
Query: 4 LKSVVHNHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGV---GGD-----AYE 55
L+SV + V TS+ M+ A+G + S+ SL+GV G + A+
Sbjct: 97 LQSVEQSSDMVETSQGKMQIATGKYHTLLINNSK-VYSCGVSLSGVLAHGSETTQCVAFT 155
Query: 56 PTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEG 115
P P P+ V VSA HS V +G V G N+ G L++ PK VE
Sbjct: 156 PIEFP-FPAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGH--LDTSRPIFRPKLVEA 212
Query: 116 LDQVNVCAAFASGVVSSA-IGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAG-EK 173
L + C A+G+ + + +G + G + GQLG G D + VP VE L
Sbjct: 213 L-KGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHG-DTLDRPVPKVVEFLKTIGP 270
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
+V+++ G + LA T+DG ++ +G ++ +G+
Sbjct: 271 VVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGH 303
Score = 132 (51.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 49/189 (25%), Positives = 83/189 (43%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLA 78
+F+ S G A G + G LG +L E + G P V ++AG + LA
Sbjct: 229 VFL-SREGHAYTC-GSNTHGQLGHGDTLDRPVPKVVEFLKTIG-P--VVQIAAGPSYVLA 283
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVCAAFASGVVSSAIGD 136
VT +G+V+++G + LG G + P+ ++ + +++ A + A+
Sbjct: 284 VTQDGSVYSFGSGSNFCLGHGEQQDEL---QPRVIQAFKRKGIHILRVSAGDEHAVALDS 340
Query: 137 DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGW 196
+G ++ WGK G LG G D + I P + L V+V E G L+G+
Sbjct: 341 NGRVYTWGKGYCGALGHG-DENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGF 399
Query: 197 GYSADGRIG 205
G+ G +G
Sbjct: 400 GWMGFGSLG 408
Score = 58 (25.5 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH 313
V ++ G H++V+ + G + G N QLG + + P +I H
Sbjct: 432 VSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEIFLH 479
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 152 (58.6 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 41/120 (34%), Positives = 59/120 (49%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V ++ G H+L +TNNG +++ G NN QLG G A P V LD +N+
Sbjct: 1175 VHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMAL--QPMLVTALDGMNITMLE 1231
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHAL 185
A ++A+ D G L++WG GQLG G P V +KI+++S G H L
Sbjct: 1232 AGQYHNAAVAD-GKLYMWGWGIYGQLGQGS-CENIATPQLVSFFKFKKILQISLGHAHTL 1289
Score = 122 (48.0 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 50/170 (29%), Positives = 82/170 (48%)
Query: 53 AYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRAT----- 106
A +P V L ++T + AG YH+ AV + G ++ WG QLG+G+ E+ AT
Sbjct: 1213 ALQPMLVTALDGMNITMLEAGQYHNAAVAD-GKLYMWGWGIYGQLGQGSCENIATPQLVS 1271
Query: 107 -WNDPKRVE-GLDQVN---VCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDI---T 158
+ K ++ L + +C A S + ++ G++ L+V+G + GQLG G T
Sbjct: 1272 FFKFKKILQISLGHAHTLVLCGAPNSHMEANHCGNE--LFVFGSNHFGQLGTGNSDHGDT 1329
Query: 159 EAIVPSRVEAL-AGEKIVKVSFGWGHALAQTEDGKLFGWGYSADG-RIGN 206
+ +P R+E +++ F LA E +LF WG S R+ N
Sbjct: 1330 KTNLPVRLEVGDCSLRLIHTKFFTN--LAVDEQDRLFTWGSSPQALRLAN 1377
Score = 120 (47.3 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 42/155 (27%), Positives = 68/155 (43%)
Query: 54 YEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNN--EVQLGRGALESRATWNDPK 111
YE + S +SAG + V + G + WG + + + E + K
Sbjct: 1105 YEDNQFAIESSRFKPISAGCAYCACVVD-GTAYFWGSSGIPSYYSAQKSTEPPEPAHAVK 1163
Query: 112 RVEGLDQVNVCA-AFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALA 170
++ L Q+N+ A G + I + L+ G + QLG+G+ + A+ P V AL
Sbjct: 1164 SLDLLSQLNLQVHAIKCGRQHTLILTNNGLYSLGNNNLCQLGIGRHMQMALQPMLVTALD 1223
Query: 171 GEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
G I + G H A DGKL+ WG+ G++G
Sbjct: 1224 GMNITMLEAGQYHNAA-VADGKLYMWGWGIYGQLG 1257
Score = 69 (29.3 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 31/123 (25%), Positives = 55/123 (44%)
Query: 241 LVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREK 300
LV E E P + + V G ++ I+ G H ++ + L + G N+ QLG E
Sbjct: 1479 LVPEPDPTEHLTPHLVDTSEVAG-RILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTED 1537
Query: 301 QD----MGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGR- 355
+D + P+D P+ + G +L + + +V + ++G N + Q GR
Sbjct: 1538 KDRRAVLKPSPIDSIERPMYVDCGSDFTLVMT---TDHV------VRAFGGNSNGQCGRD 1588
Query: 356 MGP 358
+GP
Sbjct: 1589 LGP 1591
Score = 46 (21.3 bits), Expect = 3.1e-07, Sum P(4) = 3.1e-07
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 269 IACGFDHSLVLGRN--GVLLSCGSNVYGQLGREKQDMG 304
+ CG +S + + L GSN +GQLG D G
Sbjct: 1290 VLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHG 1327
Score = 46 (21.3 bits), Expect = 3.1e-07, Sum P(4) = 3.1e-07
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 315 VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPD 359
+ ISSGL H C + SS+ T + +WG N QLG D
Sbjct: 1504 LQISSGLFH---FCLI-SSSCT-----LYTWGKNLEHQLGTEDKD 1539
Score = 39 (18.8 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYE 55
S A++ + DGS +GL + + A E
Sbjct: 237 SGQNRAIIGYSDGSICFVGLSPNCPMIASTAIE 269
>CGD|CAL0001436 [details] [associations]
symbol:ATS1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] [GO:0007117 "budding cell
bud growth" evidence=IEA] INTERPRO:IPR000408 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000073 PRINTS:PR00633
PROSITE:PS00626 eggNOG:COG5184 KO:K15462 RefSeq:XP_716156.1
ProteinModelPortal:Q5A364 STRING:Q5A364 GeneID:3642213
KEGG:cal:CaO19.13757 CGD:CAL0062057 Uniprot:Q5A364
Length = 336
Score = 147 (56.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 45/156 (28%), Positives = 78/156 (50%)
Query: 52 DAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPK 111
D + VPG P ++ G H++ + +NG V++ G N Q G ES ++
Sbjct: 34 DGTMSSEVPGKPM---KIAGGGNHTMVILDNGEVFSCGSNEFGQCGLPRGESLGVFH--- 87
Query: 112 RVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEA--IVPSRVEAL 169
+V G D +++ + ++ + G ++V G+ +G+LGLGK+ E+ I + V+
Sbjct: 88 KVPGNDWLDISCGWEFSIL---VKRSGEVYVCGRGLKGELGLGKETPESELIYSTTVD-- 142
Query: 170 AGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
G K +K H + QT +G L GWG S G++G
Sbjct: 143 -GFKEIKSCMQ--HTIIQTTNG-LVGWGNSRKGQLG 174
Score = 47 (21.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 19/71 (26%), Positives = 28/71 (39%)
Query: 290 SNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNR 349
+NV G D +FP + + + G H L V S N+ + +WGW
Sbjct: 244 TNVLQSFGNNSHDQ-LFPNNSSVAVEEYAIGSEHGL----VTSDNI------VYAWGW-- 290
Query: 350 SSQLGRMGPDN 360
S+ G G N
Sbjct: 291 -SEHGNCGTSN 300
Score = 42 (19.8 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
V V + A G +H LV N ++ + G + +G G
Sbjct: 265 VAVEEYAIGSEHGLVTSDN-IVYAWGWSEHGNCG 297
Score = 37 (18.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQL 296
V +A + +L VL S G+N + QL
Sbjct: 228 VARVAAMWSSVHILSETNVLQSFGNNSHDQL 258
>UNIPROTKB|Q5A364 [details] [associations]
symbol:ATS1 "Putative uncharacterized protein ATS1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AACQ01000073 PRINTS:PR00633 PROSITE:PS00626 eggNOG:COG5184
KO:K15462 RefSeq:XP_716156.1 ProteinModelPortal:Q5A364
STRING:Q5A364 GeneID:3642213 KEGG:cal:CaO19.13757 CGD:CAL0062057
Uniprot:Q5A364
Length = 336
Score = 147 (56.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 45/156 (28%), Positives = 78/156 (50%)
Query: 52 DAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPK 111
D + VPG P ++ G H++ + +NG V++ G N Q G ES ++
Sbjct: 34 DGTMSSEVPGKPM---KIAGGGNHTMVILDNGEVFSCGSNEFGQCGLPRGESLGVFH--- 87
Query: 112 RVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEA--IVPSRVEAL 169
+V G D +++ + ++ + G ++V G+ +G+LGLGK+ E+ I + V+
Sbjct: 88 KVPGNDWLDISCGWEFSIL---VKRSGEVYVCGRGLKGELGLGKETPESELIYSTTVD-- 142
Query: 170 AGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
G K +K H + QT +G L GWG S G++G
Sbjct: 143 -GFKEIKSCMQ--HTIIQTTNG-LVGWGNSRKGQLG 174
Score = 47 (21.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 19/71 (26%), Positives = 28/71 (39%)
Query: 290 SNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNR 349
+NV G D +FP + + + G H L V S N+ + +WGW
Sbjct: 244 TNVLQSFGNNSHDQ-LFPNNSSVAVEEYAIGSEHGL----VTSDNI------VYAWGW-- 290
Query: 350 SSQLGRMGPDN 360
S+ G G N
Sbjct: 291 -SEHGNCGTSN 300
Score = 42 (19.8 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
V V + A G +H LV N ++ + G + +G G
Sbjct: 265 VAVEEYAIGSEHGLVTSDN-IVYAWGWSEHGNCG 297
Score = 37 (18.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQL 296
V +A + +L VL S G+N + QL
Sbjct: 228 VARVAAMWSSVHILSETNVLQSFGNNSHDQL 258
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 135 (52.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 41/126 (32%), Positives = 57/126 (45%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ-----VN 120
V SVSAG YH AVT +G V WG N+ Q G + R P V + V
Sbjct: 82 VISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTD-RVPSPTPVTVVDDETHPPQLVR 140
Query: 121 VCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFG 180
V + A+ + +W WG QLGL ++ P +VE L G +V+++ G
Sbjct: 141 VLNVACGAQHTLALSNKHEVWAWGSGC--QLGLVTNVFPVWKPQKVEHLVGRYVVQIACG 198
Query: 181 WGHALA 186
H+LA
Sbjct: 199 AFHSLA 204
Score = 129 (50.5 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 28/100 (28%), Positives = 52/100 (52%)
Query: 108 NDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVE 167
+D R L V + + ++ S + +W WGK GQLG G D + P ++
Sbjct: 493 SDTHRTSNLRAVRASTSESRNLLPSLFTE---VWSWGKGHEGQLGHG-DYLPRLQPLCIK 548
Query: 168 ALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNL 207
+L+ +++VK++ G H+LA T +++ WG G++G +
Sbjct: 549 SLSKKEVVKITAGANHSLALTAQCQVYSWGSEKFGQLGRM 588
Score = 79 (32.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 24/85 (28%), Positives = 40/85 (47%)
Query: 251 YMPIIWEPFLVEGV---EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDM---G 304
Y+P + +P ++ + EVV I G +HSL L + S GS +GQLGR
Sbjct: 538 YLPRL-QPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSEKFGQLGRMNSPSTVPN 596
Query: 305 MFPVDINFHPVSISSGLGHSLAICE 329
+ V +++G H+L + +
Sbjct: 597 LTTVSDGIRVWDVAAGQTHTLLLAD 621
Score = 64 (27.6 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 27/81 (33%), Positives = 35/81 (43%)
Query: 287 SCGSNVYGQLGREKQDMGMFPVDINF----HPVSISSGLGHSLAICEVRSSNVTGGARGI 342
S G GQLG + P+ I V I++G HSLA+ T + +
Sbjct: 524 SWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLAL--------TAQCQ-V 574
Query: 343 VSWGWNRSSQLGRMG-PDNVP 362
SWG + QLGRM P VP
Sbjct: 575 YSWGSEKFGQLGRMNSPSTVP 595
Score = 51 (23.0 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAV 79
V ++G G Q LGL T++ V ++P +V L V ++ G +HSLA+
Sbjct: 160 VWAWGSGCQ--LGLVTNVFPV----WKPQKVEHLVGRYVVQIACGAFHSLAL 205
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 149 (57.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 54/200 (27%), Positives = 84/200 (42%)
Query: 17 SRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP---SDVTSVSAGH 73
S + +R+ T V G S G LGL G D P + + D+ S++ G
Sbjct: 8 SHLILRA---TCVCLKGANSYGQLGL-----GHKEDVLVPQLLKDVSCKCQDIKSIAGGG 59
Query: 74 YHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSA 133
HS +T G ++ G N QLG E + + G V + ++
Sbjct: 60 GHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVACGWDFTII--- 116
Query: 134 IGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKL 193
+G G + G + GQLG+ + ++P +++ EK V ++ G HALA TE G +
Sbjct: 117 LGRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIKQSLKEKAVGIAAGLRHALAATESGLV 176
Query: 194 FGWGYSADGRIGNL--GKAL 211
F WG R + GK L
Sbjct: 177 FQWGTGMASRAKRVHQGKTL 196
Score = 130 (50.8 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMG--MFPVDINFH----P 314
+ G V ++ACG+D +++LGR G++LSCGSN +GQLG Q G + P I
Sbjct: 99 LSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQLG-VPQISGPCLIPQKIKQSLKEKA 157
Query: 315 VSISSGLGHSLAICE 329
V I++GL H+LA E
Sbjct: 158 VGIAAGLRHALAATE 172
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 137 (53.3 bits), Expect = 5.6e-07, Sum P(3) = 5.6e-07
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+W WGK K GQLG G D+ + P V+ L G++++ + G H+LA T +++ WG +
Sbjct: 522 VWTWGKGKEGQLGHG-DVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSN 580
Query: 200 ADGRIGN 206
G++G+
Sbjct: 581 TFGQLGH 587
Score = 130 (50.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 40/129 (31%), Positives = 62/129 (48%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V +V+ G +HS AVT +G V+ WG N G+ A+ ++ ++P V D
Sbjct: 93 VVTVATGSFHSGAVTESGVVYMWGEN---AAGQCAVANQQYVSEPSPVSISDS-ETSPLL 148
Query: 126 ASGVVSSAIGDDGSL--------WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
A ++ A G++ +L W WG QLGL P +VE LAG +++V
Sbjct: 149 AVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQV 206
Query: 178 SFGWGHALA 186
+ G H+LA
Sbjct: 207 ACGAFHSLA 215
Score = 94 (38.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 34/155 (21%), Positives = 67/155 (43%)
Query: 50 GGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWN 108
G + P R+PG V + G H + +T +G V+++G L + + +
Sbjct: 26 GSFSLTPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGT-----LPWKSEAAEICPS 80
Query: 109 DPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKD--ITE----AIV 162
P L +V S A+ + G +++WG++ GQ + ++E +I
Sbjct: 81 SPLLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSIS 140
Query: 163 PSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
S L +I++++ G H LA + +++ WG
Sbjct: 141 DSETSPLLAVRILQLACGEEHTLALSISREIWAWG 175
Score = 84 (34.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI-NFHPVSISS 319
++G EV+ + G HSL L + S GSN +GQLG + FP + VS S
Sbjct: 550 LDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSE-----FPTTVPRLSKVSSES 604
Query: 320 GL 321
G+
Sbjct: 605 GV 606
Score = 67 (28.6 bits), Expect = 5.6e-07, Sum P(3) = 5.6e-07
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 3 LLKSVV--HNHVNVLTSRIFMRSASGTAVV-SFGDGSQGALGLPTS--LTGVGGDAYEPT 57
LL+S + H+ V V T + + + VV +G+ + G + ++ + +
Sbjct: 83 LLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDS 142
Query: 58 RV-PGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL 116
P L + ++ G H+LA++ + +WAWG QLG + + P++VE L
Sbjct: 143 ETSPLLAVRILQLACGEEHTLALSISREIWAWGTG--CQLG--LITTTFPVTKPQKVEHL 198
Query: 117 D-----QVNVCAAFAS 127
QV C AF S
Sbjct: 199 AGRVVLQV-ACGAFHS 213
Score = 45 (20.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 315 VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMG-PDNVP 362
+ + +G HSLA+ +S + SWG N QLG P VP
Sbjct: 556 IHLEAGGSHSLALT-AKSQ--------VYSWGSNTFGQLGHSEFPTTVP 595
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT-SVSAGHYHSLAV 79
++G G Q LGL T+ V +P +V L V V+ G +HSLA+
Sbjct: 173 AWGTGCQ--LGLITTTFPVT----KPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 37 (18.1 bits), Expect = 5.6e-07, Sum P(3) = 5.6e-07
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREK 300
G EV I D L G G++ + Y Q+ REK
Sbjct: 1612 GSEVHLIEDLMDPYLQHGEQGIMFTTLKACYYQIQREK 1649
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 135 (52.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 39/127 (30%), Positives = 70/127 (55%)
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWV 142
G V+A G NNE QLG G + R+ ++ ++ +A ++ S+A+ +G L+
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSN--TSAALTAEGELYT 60
Query: 143 WGKSKRGQLGLG-KDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD 201
+G+ + G+LGL K + VP V ++ EK+++V+ G GH + TE ++ +G
Sbjct: 61 FGEPESGKLGLPPKLLVNHKVPQLVPGIS-EKVIQVACGGGHTVVLTEKA-VYTFGLGQF 118
Query: 202 GRIGNLG 208
G++G LG
Sbjct: 119 GQLG-LG 124
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 156 (60.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 63/225 (28%), Positives = 97/225 (43%)
Query: 12 VNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGL-PSD-VTSV 69
+N + R+A G V +G +G LGL + P P D + V
Sbjct: 242 LNFADRYLVARTAQGHVYV-WGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQV 300
Query: 70 SAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESR-----ATWNDPKRVEGLDQVN--VC 122
G H+LA+T G ++AWG+N+ QLG + R WN R GL + N +
Sbjct: 301 VVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWN---RFPGLLERNDRII 357
Query: 123 AAFASGVVSSAIGDDGSLWVWGKS---KRGQLGLGKD---ITEAIVPSRVEALAGEKIVK 176
A G S A + G +++WG RG +TE P G+ +V+
Sbjct: 358 ELIAGGARSLARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRR--GDHLVE 415
Query: 177 VSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSP--LDSN 219
+ G H LA+TE G ++ WG + G++G + ++ P LD N
Sbjct: 416 LIAGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALLDPN 460
Score = 123 (48.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 40/152 (26%), Positives = 73/152 (48%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWND------PKRVEGLDQV 119
+ + + + H+ +T G ++ WG N +LG G R+ + P +E D++
Sbjct: 180 IVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRI 239
Query: 120 NVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV------EALAGEK 173
V FA + + G ++VWG + RG+LGL D + + P + E +
Sbjct: 240 -VQLNFADRYLVARTAQ-GHVYVWGFNYRGRLGLD-DEQDRLHPVELSWDFFPEWHPDDY 296
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
I++V G H LA T+ G ++ WG ++ G++G
Sbjct: 297 IIQVVVGDRHTLALTQLGYIYAWGKNSYGQLG 328
Score = 100 (40.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 43/148 (29%), Positives = 61/148 (41%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
+SL VW WG N QL G + P R+ LD A VV A
Sbjct: 79 YSLVWIARAGVWGWGNNYTGQLDFGNIHEMTK---PARIP-LDSFIPEMAPDDYVVQFAS 134
Query: 135 GD--DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEK------IVKVSFGWGHALA 186
D G +++GQL + E I +R E + IV++ + HA
Sbjct: 135 ADFLSGKARSLVATRQGQLH--EYYWERISNTRSEFIQHRHYELNVTIVQLLSDYRHAFI 192
Query: 187 QTEDGKLFGWGYSADGRIGNLGKALESS 214
TE+G ++GWG++ G +G LG E S
Sbjct: 193 LTEEGGIYGWGFNISGELG-LGDRFERS 219
Score = 75 (31.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG-REKQD 302
++ + G H+L L + G + + G N YGQLG R++QD
Sbjct: 297 IIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQD 334
Score = 71 (30.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
G +V++ G DH+L G + + G N YGQLG
Sbjct: 410 GDHLVELIAGPDHTLARTEQGYIYAWGRNYYGQLG 444
Score = 60 (26.2 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 28/114 (24%), Positives = 52/114 (45%)
Query: 252 MPIIWEPFLVE-GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
+P + P+L+E G +V + + + G + G N G+LG + + + PV++
Sbjct: 224 LPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVEL 283
Query: 311 NF------HP----VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
++ HP + + G H+LA+ ++ G I +WG N QLG
Sbjct: 284 SWDFFPEWHPDDYIIQVVVGDRHTLALTQL-------GY--IYAWGKNSYGQLG 328
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 156 (60.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 63/225 (28%), Positives = 97/225 (43%)
Query: 12 VNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGL-PSD-VTSV 69
+N + R+A G V +G +G LGL + P P D + V
Sbjct: 242 LNFADRYLVARTAQGHVYV-WGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQV 300
Query: 70 SAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESR-----ATWNDPKRVEGLDQVN--VC 122
G H+LA+T G ++AWG+N+ QLG + R WN R GL + N +
Sbjct: 301 VVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWN---RFPGLLERNDRII 357
Query: 123 AAFASGVVSSAIGDDGSLWVWGKS---KRGQLGLGKD---ITEAIVPSRVEALAGEKIVK 176
A G S A + G +++WG RG +TE P G+ +V+
Sbjct: 358 ELIAGGARSLARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRR--GDHLVE 415
Query: 177 VSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSP--LDSN 219
+ G H LA+TE G ++ WG + G++G + ++ P LD N
Sbjct: 416 LIAGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALLDPN 460
Score = 123 (48.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 40/152 (26%), Positives = 73/152 (48%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWND------PKRVEGLDQV 119
+ + + + H+ +T G ++ WG N +LG G R+ + P +E D++
Sbjct: 180 IVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRI 239
Query: 120 NVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV------EALAGEK 173
V FA + + G ++VWG + RG+LGL D + + P + E +
Sbjct: 240 -VQLNFADRYLVARTAQ-GHVYVWGFNYRGRLGLD-DEQDRLHPVELSWDFFPEWHPDDY 296
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
I++V G H LA T+ G ++ WG ++ G++G
Sbjct: 297 IIQVVVGDRHTLALTQLGYIYAWGKNSYGQLG 328
Score = 100 (40.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 43/148 (29%), Positives = 61/148 (41%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
+SL VW WG N QL G + P R+ LD A VV A
Sbjct: 79 YSLVWIARAGVWGWGNNYTGQLDFGNIHEMTK---PARIP-LDSFIPEMAPDDYVVQFAS 134
Query: 135 GD--DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEK------IVKVSFGWGHALA 186
D G +++GQL + E I +R E + IV++ + HA
Sbjct: 135 ADFLSGKARSLVATRQGQLH--EYYWERISNTRSEFIQHRHYELNVTIVQLLSDYRHAFI 192
Query: 187 QTEDGKLFGWGYSADGRIGNLGKALESS 214
TE+G ++GWG++ G +G LG E S
Sbjct: 193 LTEEGGIYGWGFNISGELG-LGDRFERS 219
Score = 75 (31.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG-REKQD 302
++ + G H+L L + G + + G N YGQLG R++QD
Sbjct: 297 IIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQD 334
Score = 71 (30.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
G +V++ G DH+L G + + G N YGQLG
Sbjct: 410 GDHLVELIAGPDHTLARTEQGYIYAWGRNYYGQLG 444
Score = 60 (26.2 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 28/114 (24%), Positives = 52/114 (45%)
Query: 252 MPIIWEPFLVE-GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
+P + P+L+E G +V + + + G + G N G+LG + + + PV++
Sbjct: 224 LPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVEL 283
Query: 311 NF------HP----VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
++ HP + + G H+LA+ ++ G I +WG N QLG
Sbjct: 284 SWDFFPEWHPDDYIIQVVVGDRHTLALTQL-------GY--IYAWGKNSYGQLG 328
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 153 (58.9 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 45/165 (27%), Positives = 77/165 (46%)
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG + GQLG G + + P +EAL G ++ KV+ G H++ +E G ++ WG
Sbjct: 180 GQVFSWGAGRHGQLGHGT-LEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWG 238
Query: 198 YSADGRIGNLGKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIWE 257
++ G++ AL + N K + V++ ++ I
Sbjct: 239 WNESGQL-----ALPTRSGTENKAEREEATELNEDGL--KEELAVADAGAPAHFIAIQPF 291
Query: 258 PFLVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
P L++ G + V +CG H+ V+ R G L + G YGQLG +
Sbjct: 292 PALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHK 336
Score = 123 (48.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 27/88 (30%), Positives = 44/88 (50%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V + G H L + G V++WG QLG G LE+ +P+ +E L + +
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAEL---EPRLLEALQGLRMAKVA 219
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGL 153
A G S + + G +++WG ++ GQL L
Sbjct: 220 AGGWHSVCLSETGDIYIWGWNESGQLAL 247
Score = 55 (24.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 314 PVSISSGLGHS--LAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVE 366
P + LG +A C R + V + +WGW + QLG ++ P VE
Sbjct: 292 PALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVE 348
>UNIPROTKB|H0YD20 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 PANTHER:PTHR22870:SF7
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
Ensembl:ENST00000532546 Bgee:H0YD20 Uniprot:H0YD20
Length = 126
Score = 132 (51.5 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 29/86 (33%), Positives = 44/86 (51%)
Query: 106 TWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSR 165
T +P RV GL+ A S+++ D G ++VWG +K GQL + VP +
Sbjct: 15 TAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA--NEAAFLPVPQK 72
Query: 166 VEA--LAGEKIVKVSFGWGHALAQTE 189
+EA EK+ + GW H +AQT+
Sbjct: 73 IEAHCFQNEKVTAIWSGWTHLVAQTD 98
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 113 (44.8 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 38/129 (29%), Positives = 55/129 (42%)
Query: 30 VSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAW 88
+ FG G LGL + A +PT +P L ++ + G +H+L +T+ G V+A
Sbjct: 138 LGFGRNPSGQLGLSQDIKL----AEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYAC 193
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGD-DGSLWVWGKSK 147
G N Q G G + P G + + G S I D GSL +G +
Sbjct: 194 GENKSGQCGVGNTHANIYSPTPINYRGPPIIRI----GCGAEFSVILDIKGSLHTFGLPE 249
Query: 148 RGQLGLGKD 156
GQLG D
Sbjct: 250 YGQLGHNTD 258
Score = 100 (40.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 30/132 (22%), Positives = 58/132 (43%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
H++ + + +GRN QLG A P + L+Q+N+ A + +
Sbjct: 127 HTILINMDRKALGFGRNPSGQLGLSQDIKLA--EKPTIIPALEQLNIVQAAVGRHHTLFL 184
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
D G+++ G++K GQ G+G P+ + G I+++ G ++ G L
Sbjct: 185 TDTGTVYACGENKSGQCGVGNTHANIYSPTPIN-YRGPPIIRIGCGAEFSVILDIKGSLH 243
Query: 195 GWGYSADGRIGN 206
+G G++G+
Sbjct: 244 TFGLPEYGQLGH 255
Score = 86 (35.3 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 26/101 (25%), Positives = 44/101 (43%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSG 320
V+GV++VD ACG +H++ + + S G +G+LG + M P + F + G
Sbjct: 294 VDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFD---TQG 350
Query: 321 LGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV 361
G C S + + +G N+ + M P V
Sbjct: 351 RGGRSVFCGSTFSLIVNELGLLFLFGQNKKTGEANMYPKPV 391
Score = 62 (26.9 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 166 VEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
V + G +IV + G H +A +++ WG+ GR+G+
Sbjct: 291 VTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGH 331
Score = 54 (24.1 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 25/110 (22%), Positives = 46/110 (41%)
Query: 248 KEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP 307
K++ +P + + F +G + CG SL++ G+L G N ++ + M+P
Sbjct: 335 KDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQN------KKTGEANMYP 388
Query: 308 VDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMG 357
PV SG + C +S + +++WG S G +G
Sbjct: 389 -----KPVQDLSGWNITDIGC-ANTSIMISADDTLIAWG--ASPTFGELG 430
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 134 (52.2 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 24/67 (35%), Positives = 44/67 (65%)
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+W WG+ K GQLG G D+ + P V++L G++++++S G H+LA T +++ WG +
Sbjct: 523 VWSWGRGKDGQLGHG-DVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSN 581
Query: 200 ADGRIGN 206
G++G+
Sbjct: 582 IFGQLGH 588
Score = 128 (50.1 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 39/133 (29%), Positives = 64/133 (48%)
Query: 62 LPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV 121
L V +V+AG +H+ AVT G V+ WG N+ G+ A+ ++ +P+ + D
Sbjct: 89 LGQHVITVAAGSFHNGAVTEGGVVYMWGNNSS---GQCAVANQPYVPEPQPISISDS-ET 144
Query: 122 CAAFASGVVSSAIGDDGSL--------WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEK 173
+ V+ A G++ +L W WG QLGL P +VE LAG
Sbjct: 145 SPLLSVRVLQLACGEEHTLALSLSREIWAWGSGC--QLGLITTTFPVTKPQKVEHLAGRV 202
Query: 174 IVKVSFGWGHALA 186
+++++ G H+LA
Sbjct: 203 VLQIACGAYHSLA 215
Score = 110 (43.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 38/155 (24%), Positives = 68/155 (43%)
Query: 50 GGDAYEPTRVPGL-PSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWN 108
G + P R+PGL V + G H L +T G V+++G+ + G E A N
Sbjct: 26 GSCSVTPERLPGLCGKTVLQAALGTNHGLLLTEGGEVYSFGK---LPWRSGPEEFCA--N 80
Query: 109 DPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKD--ITE----AIV 162
P L +V A + A+ + G +++WG + GQ + + E +I
Sbjct: 81 SPILENTLLGQHVITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISIS 140
Query: 163 PSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
S L ++++++ G H LA + +++ WG
Sbjct: 141 DSETSPLLSVRVLQLACGEEHTLALSLSREIWAWG 175
Score = 84 (34.6 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
++G EV+ ++ G HSL L + S GSN++GQLG
Sbjct: 551 LDGKEVIQLSAGGHHSLALTAKSQVYSWGSNIFGQLG 587
Score = 65 (27.9 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 60 PGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL 116
P L V ++ G H+LA++ + +WAWG QLG + + P++VE L
Sbjct: 146 PLLSVRVLQLACGEEHTLALSLSREIWAWGSG--CQLG--LITTTFPVTKPQKVEHL 198
Score = 49 (22.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 344 SWGWNRSSQLGR--MGPDNVPLVVEGLEGE 371
SWG + QLG + P PL V+ L+G+
Sbjct: 525 SWGRGKDGQLGHGDVLPRLQPLCVKSLDGK 554
Score = 48 (22.0 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 315 VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMG-PDNVP 362
+ +S+G HSLA+ +S + SWG N QLG P VP
Sbjct: 557 IQLSAGGHHSLALT-AKSQ--------VYSWGSNIFGQLGHTNSPTTVP 596
Score = 41 (19.5 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 180 GWGHALAQTEDGKLFGWGYSADGRIGN 206
G AL + +++ WG DG++G+
Sbjct: 510 GEADALLPSLRTEVWSWGRGKDGQLGH 536
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 141 (54.7 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 59/214 (27%), Positives = 98/214 (45%)
Query: 14 VLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGH 73
+LT +F S G V+S G+G ALG P T + GL + +V AG
Sbjct: 139 LLTYDLFAPSIIGDRVLSCGEGE--ALGHPGRTTTKKPRKVDIFEEEGL-KPLQAV-AGG 194
Query: 74 YHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRV---EGLDQVNVCAAFASGV- 129
HS +T+ G V+ G N + + +E + ++ +V E +++ A+G
Sbjct: 195 VHSAVLTSEGEVYMCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGAS 254
Query: 130 VSSAIGDDGSLWVWG--KSKRGQLG---LGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
++A+ D GS+ WG ++ G + L + EA P + A KIVK++ G H
Sbjct: 255 FTAALTDQGSVIAWGNLRNSNGNVDVHPLLHKMQEA--PVVIVHQAKRKIVKIAAGENHL 312
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGKALESSPLDS 218
+ E G L +G DG +G LG++ + + S
Sbjct: 313 VMLDEKGCLLTFG---DGEMGQLGRSSRTKTIRS 343
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 50/176 (28%), Positives = 78/176 (44%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYE--------PTRVPGLPSDVTSVSA-GHYHSLAVTN 81
+FG + LG+ VG D + P P ++ T V+ G H + + +
Sbjct: 392 AFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAEAPAFGAERTFVNIEGVQHVVILGS 451
Query: 82 NGAVWAWGRNNEVQLGRG---ALESRATW--NDPKRVEGLDQ--VNVCAAFASGVVSSAI 134
+G V+A G+N + LG G + + W + + +E D V V A A+ + S
Sbjct: 452 DGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIE-FDSKIVGVSAKLATSIAWS-- 508
Query: 135 GDDGSLWVWGKSKRGQLGLG-KDITEAIV--PSRVEA--LAGEKIVKVSFGWGHAL 185
+DG+ + WG GQLGLG KD E +V P + + L G I+ S H L
Sbjct: 509 -EDGTAYAWGFDTTGQLGLGLKDEDEKMVSKPEEISSAHLDGYSIIGASISDQHTL 563
Score = 57 (25.1 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 272 GFDHSLVLGRNGVLLSCGSNVYGQLG------REKQDMGMFPV--DINFHP--VSISSGL 321
G H ++LG +G + + G N LG ++ Q ++ +I F V +S+ L
Sbjct: 442 GVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKIVGVSAKL 501
Query: 322 GHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
S+A E G A +WG++ + QLG
Sbjct: 502 ATSIAWSE------DGTA---YAWGFDTTGQLG 525
Score = 46 (21.3 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 270 ACGFDHSLVLGRNGVLLSCGSNVYGQLGR--EKQDMG 304
A GF ++V G +G + G N Y QLG ++ D+G
Sbjct: 376 ASGF-WTIVHGEDGKYYAFGLNNYAQLGIKVDEADVG 411
Score = 38 (18.4 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQD 302
++V ++ S+ +G + G + GQLG +D
Sbjct: 493 KIVGVSAKLATSIAWSEDGTAYAWGFDTTGQLGLGLKD 530
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 137 (53.3 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+W WGK K GQLG G D+ + P V+ L G++++ + G H+LA T +++ WG +
Sbjct: 522 VWTWGKGKEGQLGHG-DVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSN 580
Query: 200 ADGRIGN 206
G++G+
Sbjct: 581 TFGQLGH 587
Score = 128 (50.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 40/129 (31%), Positives = 62/129 (48%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V +V+ G +HS AVT +G V+ WG N G+ A+ ++ +P V D +
Sbjct: 93 VITVATGSFHSGAVTESGVVYMWGEN---AAGQCAVANQQYVPEPSPVSISDS-ETSPSL 148
Query: 126 ASGVVSSAIGDDGSL--------WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
A ++ A G++ +L W WG QLGL P +VE LAG +++V
Sbjct: 149 AVRILQLACGEEHTLALSLSREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQV 206
Query: 178 SFGWGHALA 186
+ G H+LA
Sbjct: 207 ACGAFHSLA 215
Score = 81 (33.6 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI-NFHPVSISS 319
++G EV+ + G HSL L + S GSN +GQLG + FP + VS +
Sbjct: 550 LDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSE-----FPTTVPRLSKVSSEN 604
Query: 320 GL 321
G+
Sbjct: 605 GV 606
Score = 70 (29.7 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 23/73 (31%), Positives = 35/73 (47%)
Query: 60 PGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLD-- 117
P L + ++ G H+LA++ + +WAWG QLG + + P++VE L
Sbjct: 146 PSLAVRILQLACGEEHTLALSLSREIWAWGTG--CQLG--LITTTFPVTKPQKVEHLAGR 201
Query: 118 ---QVNVCAAFAS 127
QV C AF S
Sbjct: 202 VVLQV-ACGAFHS 213
Score = 45 (20.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 315 VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMG-PDNVP 362
+ + +G HSLA+ +S + SWG N QLG P VP
Sbjct: 556 IHLEAGGSHSLALT-AKSQ--------VYSWGSNTFGQLGHSEFPTTVP 595
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT-SVSAGHYHSLAV 79
++G G Q LGL T+ V +P +V L V V+ G +HSLA+
Sbjct: 173 AWGTGCQ--LGLITTTFPVT----KPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 37 (18.1 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREK 300
G EV I D L G G++ + Y Q+ REK
Sbjct: 1612 GSEVHLIEDLMDPFLQHGEQGIMFTTLKACYFQIQREK 1649
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 134 (52.2 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+W WGK K GQLG G D+ + P V+ L G++++ + G H+LA T +++ WG +
Sbjct: 528 VWTWGKGKEGQLGHG-DVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 586
Query: 200 ADGRIGN 206
G++G+
Sbjct: 587 TFGQLGH 593
Score = 132 (51.5 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 40/129 (31%), Positives = 62/129 (48%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V +V+ G +HS AVT+NG + WG N+ G+ A+ ++ +P V D
Sbjct: 93 VVTVATGSFHSGAVTDNGVAYMWGENSA---GQCAVANQQYVPEPNPVSIADS-EASPLL 148
Query: 126 ASGVVSSAIGDDGSL--------WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
A ++ A G++ +L W WG QLGL P +VE LAG +++V
Sbjct: 149 AVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTAFPVTKPQKVEHLAGRVVLQV 206
Query: 178 SFGWGHALA 186
+ G H+LA
Sbjct: 207 ACGAFHSLA 215
Score = 97 (39.2 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 35/149 (23%), Positives = 64/149 (42%)
Query: 56 PTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P R+PG V + G H + +T +G V+++G + G +E + P
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGT---LPWRSGPVEICPS--SPILEN 86
Query: 115 GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKD--ITE----AIVPSRVEA 168
L V S A+ D+G ++WG++ GQ + + E +I S
Sbjct: 87 ALVGQYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASP 146
Query: 169 LAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
L +I++++ G H LA + +++ WG
Sbjct: 147 LLAVRILQLACGEEHTLALSISREIWAWG 175
Score = 76 (31.8 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
++G EV+ + G HSL L + S GSN +GQLG
Sbjct: 556 LDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLG 592
Score = 66 (28.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 23/73 (31%), Positives = 35/73 (47%)
Query: 60 PGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLD-- 117
P L + ++ G H+LA++ + +WAWG QLG + + P++VE L
Sbjct: 146 PLLAVRILQLACGEEHTLALSISREIWAWGTG--CQLG--LITTAFPVTKPQKVEHLAGR 201
Query: 118 ---QVNVCAAFAS 127
QV C AF S
Sbjct: 202 VVLQV-ACGAFHS 213
Score = 44 (20.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 342 IVSWGWNRSSQLGRMG-PDNVP 362
+ SWG N QLG P VP
Sbjct: 580 VYSWGSNTFGQLGHSDFPTTVP 601
Score = 44 (20.5 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT-SVSAGHYHSLAV 79
++G G Q LGL T+ V +P +V L V V+ G +HSLA+
Sbjct: 173 AWGTGCQ--LGLITTAFPVT----KPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREK 300
G EV I D L G G++ + Y Q+ REK
Sbjct: 1618 GSEVHLIEDLMDPYLQHGEQGIMFTTLKACYYQIQREK 1655
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 129 (50.5 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 38/128 (29%), Positives = 56/128 (43%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V+S G S G LG+P P + V ++AG H++A T +G V+ W
Sbjct: 8 VLSCGSNSFGQLGVPHGPRR----CVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQW 63
Query: 89 GRNNEVQLGRGALESRA-----TWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
G GR + T +P RV GL+ A S+++ D G ++VW
Sbjct: 64 G-TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVW 122
Query: 144 GKSKRGQL 151
G +K GQL
Sbjct: 123 GSNKHGQL 130
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 134 (52.2 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+W WGK K GQLG G D+ + P V+ L G++++ + G H+LA T +++ WG +
Sbjct: 528 VWTWGKGKEGQLGHG-DVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 586
Query: 200 ADGRIGN 206
G++G+
Sbjct: 587 TFGQLGH 593
Score = 131 (51.2 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 40/129 (31%), Positives = 62/129 (48%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V +V+ G +HS AVT+NG + WG N+ G+ A+ ++ +P V D
Sbjct: 93 VITVATGSFHSGAVTDNGVAYMWGENSA---GQCAVANQQYVPEPNPVSIADS-EASPLL 148
Query: 126 ASGVVSSAIGDDGSL--------WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
A ++ A G++ +L W WG QLGL P +VE LAG +++V
Sbjct: 149 AVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTAFPVTKPQKVEHLAGRVVLQV 206
Query: 178 SFGWGHALA 186
+ G H+LA
Sbjct: 207 ACGAFHSLA 215
Score = 97 (39.2 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 35/149 (23%), Positives = 64/149 (42%)
Query: 56 PTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P R+PG V + G H + +T +G V+++G + G +E + P
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGT---LPWRSGPVEICPS--SPILEN 86
Query: 115 GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKD--ITE----AIVPSRVEA 168
L V S A+ D+G ++WG++ GQ + + E +I S
Sbjct: 87 ALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASP 146
Query: 169 LAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
L +I++++ G H LA + +++ WG
Sbjct: 147 LLAVRILQLACGEEHTLALSISREIWAWG 175
Score = 76 (31.8 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
++G EV+ + G HSL L + S GSN +GQLG
Sbjct: 556 LDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLG 592
Score = 66 (28.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 23/73 (31%), Positives = 35/73 (47%)
Query: 60 PGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLD-- 117
P L + ++ G H+LA++ + +WAWG QLG + + P++VE L
Sbjct: 146 PLLAVRILQLACGEEHTLALSISREIWAWGTG--CQLG--LITTAFPVTKPQKVEHLAGR 201
Query: 118 ---QVNVCAAFAS 127
QV C AF S
Sbjct: 202 VVLQV-ACGAFHS 213
Score = 44 (20.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 342 IVSWGWNRSSQLGRMG-PDNVP 362
+ SWG N QLG P VP
Sbjct: 580 VYSWGSNTFGQLGHSDFPTTVP 601
Score = 44 (20.5 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT-SVSAGHYHSLAV 79
++G G Q LGL T+ V +P +V L V V+ G +HSLA+
Sbjct: 173 AWGTGCQ--LGLITTAFPVT----KPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREK 300
G EV I D L G G++ + Y Q+ REK
Sbjct: 1618 GSEVHLIEDLMDPYLQHGEQGIMFTTLKACYYQIQREK 1655
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 52/197 (26%), Positives = 91/197 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVP-----GLPSDVTSVSAGHYHSLAVTNNG 83
V S+G+G+ G LGL + V PT + G T+++AG +S+ + +NG
Sbjct: 267 VYSWGNGASGRLGLGNDFSIVP----TPTLISVINRFGSNEIATAIAAGCDNSMILGSNG 322
Query: 84 AVWAWGRNNEVQLGR----GALESRATWNDPKRVEGLDQVN--VCAAFASGVVSSAIGDD 137
V+++G N +LG GAL ++T PK++ + Q+ CA++ S +
Sbjct: 323 DVYSFGSNLHYKLGYKECDGALGFQST---PKKIPSILQMKSIACASWHSVFLDLK---- 375
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVE--------ALAGEKIVK-VSFGWGHALAQT 188
G ++ G S G+LG + P RV L E+++K ++ G +
Sbjct: 376 GRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLS 435
Query: 189 EDGKLFGWGYSADGRIG 205
E G L+ WG + ++G
Sbjct: 436 ESGSLYSWGVNTKSQLG 452
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 55/195 (28%), Positives = 91/195 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V SFG LG G G P ++P + + S++ +HS+ + G V+
Sbjct: 324 VYSFGSNLHYKLGYK-ECDGALGFQSTPKKIPSI-LQMKSIACASWHSVFLDLKGRVYTC 381
Query: 89 GRNNEVQLGRGALESRATWNDPKRVE-------G-LDQVNVCAAFASGV-VSSAIGDDGS 139
G + +LGR A+ S +++ P+RV G L Q V A G ++ + + GS
Sbjct: 382 GSSTNGRLGR-AISSYSSFY-PERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSESGS 439
Query: 140 LWVWGKSKRGQLGLGK--DITEAIV-PSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGW 196
L+ WG + + QLGL I+E P V AL I + G H +A ++ G++F +
Sbjct: 440 LYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSDQGEVFCY 499
Query: 197 GYSADGRIGNLGKAL 211
G ++ + G G+ L
Sbjct: 500 GDNSTLQCG-FGEVL 513
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 43/171 (25%), Positives = 85/171 (49%)
Query: 52 DAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDP 110
D PT++ L + + S++ G +HSLA+ + G V++WG +LG G + P
Sbjct: 233 DVLIPTQILELSNKRIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLG--NDFSIVPTP 290
Query: 111 KRVEGLDQVN---VCAAFASGVVSSAI-GDDGSLWVWGKSKRGQLGLGKDITEAI----V 162
+ +++ + A A+G +S I G +G ++ +G + +LG K+ A+
Sbjct: 291 TLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGSNLHYKLGY-KECDGALGFQST 349
Query: 163 PSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALES 213
P ++ ++ K + + W H++ G+++ G S +GR LG+A+ S
Sbjct: 350 PKKIPSILQMKSIACA-SW-HSVFLDLKGRVYTCGSSTNGR---LGRAISS 395
Score = 106 (42.4 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
D G+++ G G+ G K + ++P+++ L+ ++I ++ G H+LA + G+++
Sbjct: 211 DTGAVYSSGLCSYGKTGHKKK-RDVLIPTQILELSNKRIKSIACGTHHSLAMDDLGQVYS 269
Query: 196 WGYSADGRIGNLGKALESSP 215
WG A GR+G LG P
Sbjct: 270 WGNGASGRLG-LGNDFSIVP 288
Score = 97 (39.2 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 28/96 (29%), Positives = 42/96 (43%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF-PVDINFHPVSISSGLG 322
+++ IAC HS+ L G + +CGS+ G+LGR F P ++ + L
Sbjct: 357 LQMKSIACASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLP 416
Query: 323 HSLAI----CEVRSSNVTGGARGIVSWGWNRSSQLG 354
I C + V + + SWG N SQLG
Sbjct: 417 QEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLG 452
Score = 95 (38.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 30/139 (21%), Positives = 63/139 (45%)
Query: 72 GHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVS 131
G ++L +T+ GAV++ G G+ + + P ++ L + + A G
Sbjct: 202 GQNYNLILTDTGAVYSSGL---CSYGKTGHKKKRDVLIPTQILELSNKRI-KSIACGTHH 257
Query: 132 SAIGDD-GSLWVWGKSKRGQLGLGKDITEAIVPSRVEAL----AGEKIVKVSFGWGHALA 186
S DD G ++ WG G+LGLG D + P+ + + + E ++ G +++
Sbjct: 258 SLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMI 317
Query: 187 QTEDGKLFGWGYSADGRIG 205
+G ++ +G + ++G
Sbjct: 318 LGSNGDVYSFGSNLHYKLG 336
Score = 78 (32.5 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 269 IACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQD 302
IA G D+S++LG NG + S GSN++ +LG ++ D
Sbjct: 308 IAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECD 341
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 48/168 (28%), Positives = 78/168 (46%)
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG + GQLG G + + P +EAL G + +V+ G H++ +E G ++ WG
Sbjct: 177 GQVFSWGGGRHGQLGHGT-LEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWG 235
Query: 198 YSADGRIGNLGKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIW- 256
++ G++ AL + L + +Q + G E P I
Sbjct: 236 WNESGQL-----ALPTRNLAEDGETVAREATELNEDG---SQVKRTGGAEDGAPAPFIAV 287
Query: 257 EPF--LVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
+PF L++ G + V +CG H+ V+ R G L + G YGQLG E
Sbjct: 288 QPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHE 335
Score = 124 (48.7 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 33 GDGSQGALGL-PTSLTGVGGDA--YEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWG 89
G+ G L L P + V A Y P P L + + G H+L + G V++WG
Sbjct: 127 GEAQAGRLPLLPCARAYVSPRAPFYRPL-APELRA--RQLELGAEHALLLDAAGQVFSWG 183
Query: 90 RNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRG 149
QLG G LE+ +P+ +E L + + A G S + + G +++WG ++ G
Sbjct: 184 GGRHGQLGHGTLEAEL---EPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESG 240
Query: 150 QLGL 153
QL L
Sbjct: 241 QLAL 244
Score = 51 (23.0 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 326 AICEVRSSNVTGGARGIVSWGWNRSSQLG 354
A C R + V + +WGW + QLG
Sbjct: 305 ASCGSRHTAVVTRTGELYTWGWGKYGQLG 333
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 114 (45.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 27/59 (45%), Positives = 35/59 (59%)
Query: 95 QLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGL 153
QLG G+LES P+ VE L V + A A G S+ + D G L+VWG ++ GQLGL
Sbjct: 12 QLGHGSLESE---QQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGL 67
Score = 91 (37.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
+ GQLG G +E P VEAL G + V+ G H+ ++ G L+ WG++ G++G
Sbjct: 9 RHGQLGHGSLESEQ-QPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGL 67
Query: 207 LGKAL 211
+A+
Sbjct: 68 PSRAV 72
Score = 65 (27.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
V ++CG H+ L R G L + G YGQLG
Sbjct: 118 VAAVSCGSRHTAALTRGGELNTWGWGKYGQLG 149
Score = 60 (26.2 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKA 210
+ VS G H A T G+L WG+ G++G+ +A
Sbjct: 118 VAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRA 154
Score = 52 (23.4 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 20/69 (28%), Positives = 29/69 (42%)
Query: 308 VDINFHPVSISSGLGHSLAICEVRSSNVTGGARG--IVSWGWNRSSQLG---RMGPDNVP 362
+ I P + L ++A S + RG + +WGW + QLG R D+ P
Sbjct: 101 ISIQAFPALLDLPLEPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDH-P 159
Query: 363 LVVEGLEGE 371
VE L E
Sbjct: 160 RRVEQLWAE 168
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 146 (56.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG + GQLG G + + P +EAL G ++ +V+ G H++ +E G ++ WG
Sbjct: 180 GQVFSWGGGRHGQLGHGS-LEAELEPRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWG 238
Query: 198 YSADGRIGNLGKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIWE 257
++ G++ AL + + L G ++ I
Sbjct: 239 WNESGQL-----ALPTRSGTEKKTVREEATELNDDGLRGEEAALADVGAPAH-FIAIQPF 292
Query: 258 PFLVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF 312
P L++ G + V +CG H+ V+ R G L + G YGQLG + P + +
Sbjct: 293 PALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEY 350
Score = 129 (50.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 27/88 (30%), Positives = 46/88 (52%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V + G H+L + G V++WG QLG G+LE+ +P+ +E L + +
Sbjct: 163 VRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAEL---EPRLLEALQGLRMAEVA 219
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGL 153
A G S + + G +++WG ++ GQL L
Sbjct: 220 AGGWHSVCVSETGDIYIWGWNESGQLAL 247
Score = 51 (23.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 326 AICEVRSSNVTGGARGIVSWGWNRSSQLG 354
A C R + V + +WGW + QLG
Sbjct: 307 ASCGSRHTAVVTRTGELYTWGWGKYGQLG 335
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 134 (52.2 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+W WGK K GQLG G D+ + P V+ L G++++ + G H+LA T +++ WG +
Sbjct: 532 VWTWGKGKEGQLGHG-DVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 590
Query: 200 ADGRIGN 206
G++G+
Sbjct: 591 TFGQLGH 597
Score = 127 (49.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 39/129 (30%), Positives = 63/129 (48%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V +V+ G +H+ AVT++G V+ WG N+ G+ A+ ++ +P V D
Sbjct: 98 VVTVATGSFHTGAVTDSGVVYMWGENSA---GQCAVANQPYVPEPNPVSISDS-ETSPLL 153
Query: 126 ASGVVSSAIGDDGSL--------WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
A ++ A G++ +L W WG QLGL P +VE LAG +++V
Sbjct: 154 AVRILQLACGEEHTLALSLSREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQV 211
Query: 178 SFGWGHALA 186
+ G H+LA
Sbjct: 212 ACGAFHSLA 220
Score = 76 (31.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
++G EV+ + G HSL L + S GSN +GQLG
Sbjct: 560 LDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLG 596
Score = 66 (28.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 23/73 (31%), Positives = 35/73 (47%)
Query: 60 PGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLD-- 117
P L + ++ G H+LA++ + +WAWG QLG + + P++VE L
Sbjct: 151 PLLAVRILQLACGEEHTLALSLSREIWAWGTG--CQLG--LITTTFPVTKPQKVEHLAGR 206
Query: 118 ---QVNVCAAFAS 127
QV C AF S
Sbjct: 207 VVLQV-ACGAFHS 218
Score = 44 (20.5 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT-SVSAGHYHSLAV 79
++G G Q LGL T+ V +P +V L V V+ G +HSLA+
Sbjct: 178 AWGTGCQ--LGLITTTFPVT----KPQKVEHLAGRVVLQVACGAFHSLAL 221
Score = 44 (20.5 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 342 IVSWGWNRSSQLGRMG-PDNVP 362
+ SWG N QLG P VP
Sbjct: 584 VYSWGSNTFGQLGHSDFPTTVP 605
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREK 300
G EV I D L G G++ + Y Q+ REK
Sbjct: 1622 GSEVHLIEDLMDPYLQHGEQGIMFTTLKACYYQIQREK 1659
>UNIPROTKB|G4N5N9 [details] [associations]
symbol:MGG_05277 "Alpha-tubulin suppressor protein Aats1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CM001233 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 KO:K15462
RefSeq:XP_003712836.1 EnsemblFungi:MGG_05277T0 GeneID:2675298
KEGG:mgr:MGG_05277 Uniprot:G4N5N9
Length = 382
Score = 139 (54.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 52/176 (29%), Positives = 81/176 (46%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V SFG GS+G LG + V A P ++V +SA H +AV +NG V+ W
Sbjct: 136 VYSFGCGSKGELGQGPLIIRVPF-AQPIANFPPPETEVVGLSACMGHVVAVLSNGDVYGW 194
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKR 148
G + QLG A E T +P+++EG+ V A + +G+ GS G
Sbjct: 195 GNGRKGQLG--APEGIIT--EPRKIEGVP-FKVAKAACGKEFTCLVGEPGS----GDIL- 244
Query: 149 GQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
+GL K ++ P+ V G + ++ S WG+ DG + WG + G++
Sbjct: 245 -VMGLDKWSVQSSAPNSVP---GWRDLQAS--WGNIYVLQADGSILSWGRNDHGQL 294
Score = 46 (21.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 317 ISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG-RMGPDN 360
I+ G H +AI E R S + +WGW G ++ DN
Sbjct: 305 IAVGSEHVVAIDEARQS--------VAAWGWGEHGNCGPQVQDDN 341
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 132 (51.5 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+W WGK K GQLG G D+ + P V+ L G++++ + G H+LA T +++ WG +
Sbjct: 522 VWTWGKGKDGQLGHG-DVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 580
Query: 200 ADGRIGN 206
G++G+
Sbjct: 581 TFGQLGH 587
Score = 129 (50.5 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 40/129 (31%), Positives = 62/129 (48%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V +V+ G +HS AVT +G V+ WG N+ G+ A+ ++ +P V D
Sbjct: 93 VVTVATGSFHSGAVTESGVVYMWGENSA---GQCAVANQQYVPEPNPVSISDS-ETSPLL 148
Query: 126 ASGVVSSAIGDDGSL--------WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
A ++ A G++ +L W WG QLGL P +VE LAG +++V
Sbjct: 149 AVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQV 206
Query: 178 SFGWGHALA 186
+ G H+LA
Sbjct: 207 ACGAFHSLA 215
Score = 76 (31.8 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
++G EV+ + G HSL L + S GSN +GQLG
Sbjct: 550 LDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLG 586
Score = 66 (28.3 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 23/73 (31%), Positives = 35/73 (47%)
Query: 60 PGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLD-- 117
P L + ++ G H+LA++ + +WAWG QLG + + P++VE L
Sbjct: 146 PLLAVRILQLACGEEHTLALSISREIWAWGTG--CQLG--LITTTFPVTKPQKVEHLAGR 201
Query: 118 ---QVNVCAAFAS 127
QV C AF S
Sbjct: 202 VVLQV-ACGAFHS 213
Score = 44 (20.5 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT-SVSAGHYHSLAV 79
++G G Q LGL T+ V +P +V L V V+ G +HSLA+
Sbjct: 173 AWGTGCQ--LGLITTTFPVT----KPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 44 (20.5 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 342 IVSWGWNRSSQLGRMG-PDNVP 362
+ SWG N QLG P VP
Sbjct: 574 VYSWGSNTFGQLGHSDFPTTVP 595
Score = 39 (18.8 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 180 GWGHALAQTEDGKLFGWGYSADGRIGN 206
G AL + +++ WG DG++G+
Sbjct: 509 GEADALLPSLRTEVWTWGKGKDGQLGH 535
Score = 37 (18.1 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREK 300
G EV I D L G G++ + Y Q+ REK
Sbjct: 1605 GSEVHLIEDLMDPYLQHGEQGIMFTTLKACYYQIQREK 1642
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 144 (55.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 47/168 (27%), Positives = 77/168 (45%)
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG + GQLG G + + P +EAL G + +V+ G H++ +E G ++ WG
Sbjct: 177 GQVFSWGGGRHGQLGHGT-LEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWG 235
Query: 198 YSADGRIGNLGKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIW- 256
++ G++ AL + L + + + G E P I
Sbjct: 236 WNESGQL-----ALPTRNLAEDGETVAREELNEDGSQVKR-----TGGAEDGAPAPFIAV 285
Query: 257 EPF--LVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
+PF L++ G + V +CG H+ V+ R G L + G YGQLG E
Sbjct: 286 QPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHE 333
Score = 124 (48.7 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 33 GDGSQGALGL-PTSLTGVGGDA--YEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWG 89
G+ G L L P + V A Y P P L + + G H+L + G V++WG
Sbjct: 127 GEAQAGRLPLLPCARAYVSPRAPFYRPL-APELRA--RQLELGAEHALLLDAAGQVFSWG 183
Query: 90 RNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRG 149
QLG G LE+ +P+ +E L + + A G S + + G +++WG ++ G
Sbjct: 184 GGRHGQLGHGTLEAEL---EPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESG 240
Query: 150 QLGL 153
QL L
Sbjct: 241 QLAL 244
Score = 51 (23.0 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 326 AICEVRSSNVTGGARGIVSWGWNRSSQLG 354
A C R + V + +WGW + QLG
Sbjct: 303 ASCGSRHTAVVTRTGELYTWGWGKYGQLG 331
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 144 (55.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 46/167 (27%), Positives = 76/167 (45%)
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG + GQLG G E P +EAL G + +V+ G H++ +E G ++ WG
Sbjct: 183 GQVFSWGGGRHGQLGHGTLEAER-EPRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWG 241
Query: 198 YSADGRIGNLGKALESSPLDSNXXXXXXXXXXXXXXXXXKAQKLVSEGMEKEKYMPIIWE 257
++ G++ ++L D +A +EG + I +
Sbjct: 242 WNESGQLALPARSLAE---DGKTITGDAPGLNEDGSEAKRA----TEGEDGGPTPFIAVQ 294
Query: 258 PF--LVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
PF L++ G + V +CG H+ V+ R G L + G YGQLG +
Sbjct: 295 PFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHK 341
Score = 121 (47.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 72 GHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVS 131
G H+L + G V++WG QLG G LE+ +P+ +E L + + A G S
Sbjct: 172 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAE---REPRVLEALQGLPMAEVAAGGWHS 228
Query: 132 SAIGDDGSLWVWGKSKRGQLGL 153
+ + G +++WG ++ GQL L
Sbjct: 229 VCVSETGDIYIWGWNESGQLAL 250
Score = 58 (25.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 299 EKQDMGMFP-VDINFHPVSISSGLGHSL--AICEVRSSNVTGGARGIVSWGWNRSSQLG 354
E +D G P + + P + LG A C R + V + +WGW + QLG
Sbjct: 281 EGEDGGPTPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 339
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 148 (57.2 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 43/143 (30%), Positives = 63/143 (44%)
Query: 69 VSAGHYHSLAVTNNGAVWAW-----GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA 123
V AG H VT ++ W G QLG G RA++ PK VE L +V
Sbjct: 356 VCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHG---DRASYRQPKHVEKLQGKSVQK 412
Query: 124 AFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDI-TEAIVPSRVEALAGEKIVKVSFGWG 182
+ I D+G L+ +G G LG+ + +E + P V+ E + +VS G
Sbjct: 413 VSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDS 472
Query: 183 HALAQTEDGKLFGWGYSADGRIG 205
H +A T ++ WG GR+G
Sbjct: 473 HIMALTRSKSVYSWGCGEYGRLG 495
Score = 148 (57.2 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 72/260 (27%), Positives = 118/260 (45%)
Query: 121 VCAAFASGVVSSAIGDDGSLWV--WGKSK-RGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
VCA A V + + + WV G SK GQLG G D P VE L G+ + KV
Sbjct: 356 VCAGDAHFAVVT-VEKELYTWVNMQGGSKLHGQLGHG-DRASYRQPKHVEKLQGKSVQKV 413
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRIG---NLG-KALESSPLDS--NXXXXXXXXXXXX 231
S G + T++G+L+ +G G +G + G + LE +D N
Sbjct: 414 SCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSH 473
Query: 232 XXXXXKAQKLVSEGMEKEKYMPI-----IWEPFLVE---GVEVVDIACGFDHSLVLGRNG 283
+++ + S G + + + ++ P VE G+ +V++ CG D S +L G
Sbjct: 474 IMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTG 533
Query: 284 VLLSCGSNVYGQLGREKQDMGMFPVDINFH--PVSISSGLGHSLAICEVRSSNV--TGGA 339
+L+CG N + +LG + G+ + F P + S L L+ ++RS + T A
Sbjct: 534 KVLACGLNEHNKLGLNQYTAGIINHEA-FQEVPYTTSLTLAKQLSFYKIRSISPGRTHTA 592
Query: 340 ----RG-IVSWGWNRSSQLG 354
RG ++++G N+ QLG
Sbjct: 593 AIDERGRLLTFGSNKCGQLG 612
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 54/191 (28%), Positives = 84/191 (43%)
Query: 28 AVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVP---GLPSDVTSVSAGHYHSLAVTNNGA 84
+V S+G G G LGL + D Y P +V GL + +V G S +T G
Sbjct: 482 SVYSWGCGEYGRLGLDSE-----DDVYSPQKVEVQRGLC--IVNVCCGSDGSFLLTLTGK 534
Query: 85 VWAWGRNNEVQLG-----RGALESRATWNDPKRV-----EGLDQVNVCAAFASGVVSSAI 134
V A G N +LG G + A P + L + + ++AI
Sbjct: 535 VLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAI 594
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA-LAGEKIVKVSFGWGHALAQTEDGKL 193
+ G L +G +K GQLG+G D + + + + L G+++++VS G A T D +
Sbjct: 595 DERGRLLTFGSNKCGQLGVG-DYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHI 653
Query: 194 FGWGYSADGRI 204
F WG +GR+
Sbjct: 654 FAWGNGGNGRL 664
Score = 133 (51.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 59/191 (30%), Positives = 87/191 (45%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPG-LPSDVTSVSAGHYHSLAVTNNGAVWAWG 89
SFG G LG+ S G + EP V L V VS G H +A+T + +V++WG
Sbjct: 431 SFGSDYYGCLGVNQS---AGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWG 487
Query: 90 RNNEVQLGRGALESRATWNDPKRVE---GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
+ GR L+S P++VE GL VNVC + G S + G + G +
Sbjct: 488 CG---EYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCG-SDG--SFLLTLTGKVLACGLN 541
Query: 147 KRGQLGLGKDIT-----EAI--VP-----SRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
+ +LGL + EA VP + + L+ KI +S G H A E G+L
Sbjct: 542 EHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLL 601
Query: 195 GWGYSADGRIG 205
+G + G++G
Sbjct: 602 TFGSNKCGQLG 612
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 133 (51.9 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
+W WGK K GQLG G D+ + P V+ L G++++ + G H+LA T +++ WG +
Sbjct: 527 VWTWGKGKEGQLGHG-DVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSN 585
Query: 200 ADGRIGN 206
G++G+
Sbjct: 586 TFGQLGH 592
Score = 125 (49.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 38/129 (29%), Positives = 63/129 (48%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V +V++G +H+ AVT +G + WG N+ G+ A+ ++ +P V D +
Sbjct: 93 VVTVASGSFHNGAVTESGVAYMWGENSA---GQCAVANQQYVPEPNPVSISDS-ETSSLL 148
Query: 126 ASGVVSSAIGDDGSL--------WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
A ++ A G++ +L W WG QLGL P +VE LAG +++V
Sbjct: 149 AVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQV 206
Query: 178 SFGWGHALA 186
+ G H+LA
Sbjct: 207 ACGAFHSLA 215
Score = 74 (31.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
++G EV+ + G HSL L + S GSN +GQLG
Sbjct: 555 LDGKEVIYLEAGGYHSLALTAKSQVYSWGSNTFGQLG 591
Score = 44 (20.5 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT-SVSAGHYHSLAV 79
++G G Q LGL T+ V +P +V L V V+ G +HSLA+
Sbjct: 173 AWGTGCQ--LGLITTTFPVT----KPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 44 (20.5 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 342 IVSWGWNRSSQLGRMG-PDNVP 362
+ SWG N QLG P VP
Sbjct: 579 VYSWGSNTFGQLGHYDFPTTVP 600
Score = 37 (18.1 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREK 300
G EV I D L G G++ + Y Q+ REK
Sbjct: 1617 GSEVHLIEDLMDPYLQHGEQGIMFTTLKACYYQIQREK 1654
>POMBASE|SPCC330.11 [details] [associations]
symbol:btb1 "BTB/POZ domain protein Btb1" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00023 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 UniPathway:UPA00143
PomBase:SPCC330.11 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006511 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0000151 eggNOG:COG5184
PIR:T41321 RefSeq:NP_587711.1 ProteinModelPortal:O74881
IntAct:O74881 STRING:O74881 EnsemblFungi:SPCC330.11.1
GeneID:2538714 KEGG:spo:SPCC330.11 OMA:STSELCT OrthoDB:EOG42VCR5
NextBio:20799899 Uniprot:O74881
Length = 1347
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 40/140 (28%), Positives = 63/140 (45%)
Query: 33 GDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNN 92
G G+ G +G T + Y +PG+ V +S H HSLA+T G++++WG+N
Sbjct: 222 GIGAGGRIGFNTDVQ------YNFIPIPGIIHKVIQISVSHTHSLALTKFGSIYSWGKNG 275
Query: 93 EVQLGRGALESRAT---WNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRG 149
+LG E + P+R+ + A+G S D ++ WG + G
Sbjct: 276 SGELGLSNDELKKDDPIQITPRRISAFKDYQIIG-MAAGKSYSVAWTDTDIYSWGLNN-G 333
Query: 150 QLGLGKDITEAIVPSRVEAL 169
QLG+ I+ P RV L
Sbjct: 334 QLGISDHISVVSTPRRVAGL 353
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 81/322 (25%), Positives = 130/322 (40%)
Query: 32 FGDGSQGALGLPTSLTGVGG--DAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWAW 88
+G G + LT + D Y + +P D + +S+G HSL TN G V+A
Sbjct: 87 YGAGINNRFQIGGQLTNINKYQDYYISAKKINIPGDEILEISSGRAHSLIRTNLG-VFAI 145
Query: 89 GRNNEVQLGR---------GALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
G NN Q GR G+ ES E + ++ C+ S VV S+ G+
Sbjct: 146 GDNNFGQCGRNPENMDYVVGSEESPLLPLSFPTSEPIISIH-CSMDTSFVVDSS----GA 200
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEA-LAGEKIVKVSFGWGHALAQTEDGKLFGWGY 198
++ +G ++ GQ G + P++V + G KI KVS LA +E+G++F WG
Sbjct: 201 VFSFGLNEDGQCG-NEAYGIQWEPAKVRGDVEGSKIQKVSGSTDTLLACSENGEIFIWGQ 259
Query: 199 SADGRIGNLGKALE--SSPLDSNXXXXXXXXXXXXXXXXXKAQK---------LVSEGME 247
+ G+ ++ +S +N + + ++ G E
Sbjct: 260 TEYGQAAGATDEIQLNTSRHVANSLGPIICVDSTQSSVVARNSRGNVFVWGVGVLGMGPE 319
Query: 248 KEKYM-PIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF 306
E P + L +G V ++ G + +G L G N Y LG Q +F
Sbjct: 320 AESLKTPTQMDQPLFDGKMVTSVSAGNSCMSAINEDGRLFIWGENRYSSLGLGHQKRQLF 379
Query: 307 PVDINFHPVSI-SSGLG--HSL 325
P + F P + + LG HSL
Sbjct: 380 PYQL-FLPGDVRKAALGPDHSL 400
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 109 (43.4 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 48/190 (25%), Positives = 87/190 (45%)
Query: 21 MRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEP-TRVPGLPSDVTSVSAGH--YHSL 77
M++A+G + G +LG+ G P T+ P + S GH H+L
Sbjct: 519 MKTANGKIYYT---GKYQSLGIKQGGPSAGKWVELPITKSP----KIVHFSVGHDGSHAL 571
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWN-DPKRVEGLD-QVNVCAAFASGVVSSAIG 135
V +G+V+ G ++ + G A R + PK++ ++ ++ VC A +G SS I
Sbjct: 572 LVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGS-SSVIS 630
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
DG L+++GK + D + S V L G + +V+ G H ++G+++
Sbjct: 631 KDGELYMFGKD-----AIYSDSS-----SLVSDLKGHFVTQVAMGKAHTCVLMKNGEVWT 680
Query: 196 WGYSADGRIG 205
+G + G+ G
Sbjct: 681 FGVNNKGQCG 690
Score = 101 (40.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 119 VNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVS 178
V V F VV + ++G ++ +G + GQLG G D+ P+ V+AL G +V+
Sbjct: 919 VQVSCGFHHSVV---LMENGDVYTFGYGQHGQLGHG-DVNSRGCPTLVQALPGPS-TQVT 973
Query: 179 FGWGHALAQTEDGKLFGWGYSADGRIG 205
G H DG++F +G + G++G
Sbjct: 974 AGSNHTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 85 (35.0 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHP---VSISSG 320
V V ++CGF HS+VL NG + + G +GQLG + P + P +++G
Sbjct: 916 VRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAG 975
Query: 321 LGHSLAI 327
H+ +
Sbjct: 976 SNHTAVL 982
Score = 81 (33.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 27/76 (35%), Positives = 36/76 (47%)
Query: 34 DGSQGALGLPTSLTGVGGDA-YEPTRVPGLPSD-----VTSVSAGHYHSLAVTNNGAVWA 87
+GS + L G DA Y + L SD VT V+ G H+ + NG VW
Sbjct: 623 NGSSSVISKDGELYMFGKDAIYSDSS--SLVSDLKGHFVTQVAMGKAHTCVLMKNGEVWT 680
Query: 88 WGRNNEVQLGR--GAL 101
+G NN+ Q GR GA+
Sbjct: 681 FGVNNKGQCGRDTGAM 696
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 104 (41.7 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 39/152 (25%), Positives = 67/152 (44%)
Query: 64 SDVTSVSAGH--YHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV 121
+++ V+ GH H+L V ++G V+ G + G + R PK V+ +
Sbjct: 649 ANIVHVAVGHDGIHALLVNDDGTVFFAGTARRGEDGDSSKNRR----QPKAVKPKKMTKI 704
Query: 122 CAAFASGVVSSAIGDDGSLWVWGKSKRGQLGL-GKDITEAIVPSRVEALAGEKIVKVSFG 180
VV +A + S +V +K G+L + GKD V L + + KV+ G
Sbjct: 705 DGHV---VVHAACNNGTSAFV---TKTGKLIMYGKDTAHCDAMGFVSELLEQHVTKVALG 758
Query: 181 WGHALAQTEDGKLFGWGYSADGRIGNLGKALE 212
H +A G+LF +G + G+ G + L+
Sbjct: 759 KAHCVALNAKGQLFSFGLNNKGQCGRIFNKLQ 790
Score = 95 (38.5 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 33/104 (31%), Positives = 51/104 (49%)
Query: 260 LVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSIS- 318
L VV +ACG H++VL G + + GSN YGQLG PV + P +IS
Sbjct: 962 LTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSGPVRVQV-PGAISQ 1020
Query: 319 --SGLGHSLAICEVRSSNVTGGARGIV-SWGWNRSSQLGRMGPD 359
+G H++ + ++G+V ++G + QLGR+ D
Sbjct: 1021 VAAGSNHTVLLT----------SKGMVYTFGNYQKGQLGRLPSD 1054
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 140 (54.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 41/164 (25%), Positives = 72/164 (43%)
Query: 50 GGDAYEPTRVPGLPSDVTS--VSAGHYHSLAVTNNGAVWAW-----GRNNEVQLGRGALE 102
GG P ++ + S ++ V AG+ H VT ++ W G QLG G
Sbjct: 372 GGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG--- 428
Query: 103 SRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDI-TEAI 161
+A++ PK VE L + + + D+G L+ +G G +G+ K E +
Sbjct: 429 DKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVL 488
Query: 162 VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
P ++ + + +VS G H + T + +++ WG GR+G
Sbjct: 489 EPMQLNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLG 532
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 60/207 (28%), Positives = 91/207 (43%)
Query: 10 NHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VT 67
NHV VLT R+ V S+G G G LGL + D Y P +V +P +
Sbjct: 509 NHVVVLT-----RNKE---VYSWGCGEYGRLGLDSE-----EDYYTPQKVD-VPKALIIV 554
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLG-----RGALESRATWNDPKRVEGL--DQVN 120
+V G + +T +G V A G N +LG G + A P Q++
Sbjct: 555 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 614
Query: 121 V--CAAFASGVV-SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
A G ++AI + G L +G +K GQLG+G + L G+++++V
Sbjct: 615 FYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRV 674
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRI 204
S G +A T+D +F WG +GR+
Sbjct: 675 SCGDEFTIAATDDNHIFAWGNGGNGRL 701
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 77/307 (25%), Positives = 130/307 (42%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
S VT R +EV + G + + K G VCA V + +
Sbjct: 350 SSTVTETPIAVVTSRTSEVYVWGGGKSTPQKLDVIK--SGCSARQVCAGNTHFAVVT-VE 406
Query: 136 DDGSLWV--WGKSK-RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGK 192
+ WV G +K GQLG G D P VE L G+ I +VS G + T++G+
Sbjct: 407 KELYTWVNMQGGTKLHGQLGHG-DKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQ 465
Query: 193 LFGWGYSADGRIGN---LG-KALESSPLD--SNXXXXXXXXXXXXXXXXXKAQKLVSEGM 246
L+ +G G +G G + LE L+ SN + +++ S G
Sbjct: 466 LYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGC 525
Query: 247 ----------EKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQL 296
E++ Y P + + + + +V + CG D + +L ++G +L+CG N + +L
Sbjct: 526 GEYGRLGLDSEEDYYTP--QKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKL 583
Query: 297 GREKQDMGMFPVDINFH--PVSISSGLGHSLAICEVRS--SNVTGGA----RG-IVSWGW 347
G + G+ + +H P + S L L+ ++R+ T A RG ++++G
Sbjct: 584 GLNQCMSGIINHEA-YHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGC 642
Query: 348 NRSSQLG 354
N+ QLG
Sbjct: 643 NKCGQLG 649
Score = 38 (18.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 7/34 (20%), Positives = 19/34 (55%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQL 296
G +V+ ++CG + ++ + + + G+ G+L
Sbjct: 668 GKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 701
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 141 (54.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 41/164 (25%), Positives = 72/164 (43%)
Query: 50 GGDAYEPTRVPGLPSDVTS--VSAGHYHSLAVTNNGAVWAW-----GRNNEVQLGRGALE 102
GG P ++ + S ++ V AG+ H VT ++ W G QLG G
Sbjct: 370 GGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG--- 426
Query: 103 SRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDI-TEAI 161
+A++ PK VE L + + + D+G L+ +G G +G+ K E +
Sbjct: 427 DKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVL 486
Query: 162 VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
P +++ + +VS G H + T + +++ WG GR+G
Sbjct: 487 EPMQLDFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLG 530
Score = 134 (52.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 60/207 (28%), Positives = 90/207 (43%)
Query: 10 NHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VT 67
NHV VLT R+ V S+G G G LGL + D Y P +V +P +
Sbjct: 507 NHVVVLT-----RNKE---VYSWGCGEYGRLGLDSE-----EDYYTPQKVD-VPKALIIV 552
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLG-----RGALESRATWNDPKRVEGL--DQVN 120
+V G + +T +G V A G N +LG G + A P Q++
Sbjct: 553 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 612
Query: 121 V--CAAFASGVVSSAIGDD-GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
A G +A D+ G L +G +K GQLG+G + L G+++++V
Sbjct: 613 FYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRV 672
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRI 204
S G +A T+D +F WG +GR+
Sbjct: 673 SCGDEFTIAATDDNHIFAWGNGGNGRL 699
Score = 38 (18.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 7/34 (20%), Positives = 19/34 (55%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQL 296
G +V+ ++CG + ++ + + + G+ G+L
Sbjct: 666 GKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 699
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 109 (43.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 48/190 (25%), Positives = 87/190 (45%)
Query: 21 MRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEP-TRVPGLPSDVTSVSAGH--YHSL 77
M++A+G + G +LG+ G P T+ P + S GH H+L
Sbjct: 505 MKTANGKIYYT---GKYQSLGIKQGGPSAGKWVELPITKSP----KIVHFSVGHDGSHAL 557
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWN-DPKRVEGLD-QVNVCAAFASGVVSSAIG 135
V +G+V+ G ++ + G A R + PK++ ++ ++ VC A +G SS I
Sbjct: 558 LVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGS-SSVIS 616
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
DG L+++GK + D + S V L G + +V+ G H ++G+++
Sbjct: 617 KDGELYMFGKD-----AIYSDSS-----SLVSDLKGHFVTQVAMGKAHTCVLMKNGEVWT 666
Query: 196 WGYSADGRIG 205
+G + G+ G
Sbjct: 667 FGVNNKGQCG 676
Score = 101 (40.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 119 VNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVS 178
V V F VV + ++G ++ +G + GQLG G D+ P+ V+AL G +V+
Sbjct: 905 VQVSCGFHHSVV---LMENGDVYTFGYGQHGQLGHG-DVNSRGCPTLVQALPGPS-TQVT 959
Query: 179 FGWGHALAQTEDGKLFGWGYSADGRIG 205
G H DG++F +G + G++G
Sbjct: 960 AGSNHTAVLVMDGQVFTFGSFSKGQLG 986
Score = 85 (35.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHP---VSISSG 320
V V ++CGF HS+VL NG + + G +GQLG + P + P +++G
Sbjct: 902 VRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAG 961
Query: 321 LGHSLAI 327
H+ +
Sbjct: 962 SNHTAVL 968
Score = 81 (33.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 27/76 (35%), Positives = 36/76 (47%)
Query: 34 DGSQGALGLPTSLTGVGGDA-YEPTRVPGLPSD-----VTSVSAGHYHSLAVTNNGAVWA 87
+GS + L G DA Y + L SD VT V+ G H+ + NG VW
Sbjct: 609 NGSSSVISKDGELYMFGKDAIYSDSS--SLVSDLKGHFVTQVAMGKAHTCVLMKNGEVWT 666
Query: 88 WGRNNEVQLGR--GAL 101
+G NN+ Q GR GA+
Sbjct: 667 FGVNNKGQCGRDTGAM 682
>ASPGD|ASPL0000075377 [details] [associations]
symbol:AN10609 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0031305 "integral to mitochondrial inner
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001303
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
EnsemblFungi:CADANIAT00005518 HOGENOM:HOG000197481 OMA:QRIECGR
Uniprot:C8V9T3
Length = 575
Score = 90 (36.7 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
GV+V IA G HSL+L +NG +L+ G N +GQLG
Sbjct: 313 GVKVAQIATGDYHSLLLTKNGNVLAFGDNSFGQLG 347
Score = 83 (34.3 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 34/138 (24%), Positives = 59/138 (42%)
Query: 58 RVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLD 117
++P + +SA + A + ++ WG N + + ES P+R+ D
Sbjct: 84 KLPKQSKPIEDLSAEYVQKKASLKSPGLYIWGNNKYRVVDPESKES--VIKTPRRLSYFD 141
Query: 118 QVNVCAAFASGVVS-SAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVK 176
NV G S +AI ++G L WGK G TE P++ L G+ ++
Sbjct: 142 S-NVLRDLKLGETSGAAIIENGDLVQWGK--------GYSETE-FKPTKT--LTGKNLIS 189
Query: 177 VSFGWGHALAQTEDGKLF 194
+S +A + DGK++
Sbjct: 190 LSMSHDRIVALSSDGKVY 207
Score = 41 (19.5 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 305 MFPVDINFHPVSISSGLGHSLAICEV-----RSSNVTGGA--RG--IVSWGWNRSSQLG 354
+ P+ +N IS G H A+ + RS++ GA G +V WG N QLG
Sbjct: 455 LLPIRLN----DISVGTTHVAAVLDNQTRLNRSASSLEGADDAGLDVVWWGGNEHFQLG 509
>POMBASE|SPAC10F6.04 [details] [associations]
symbol:SPAC10F6.04 "RCC domain protein Ats1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0007017 "microtubule-based process" evidence=ISO]
PomBase:SPAC10F6.04 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006400 GO:GO:0007017 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
KO:K15462 OrthoDB:EOG4H75MP PIR:T37498 RefSeq:NP_593255.1
ProteinModelPortal:O42645 STRING:O42645 EnsemblFungi:SPAC10F6.04.1
GeneID:2542973 KEGG:spo:SPAC10F6.04 OMA:WIVIEEN NextBio:20804007
Uniprot:O42645
Length = 351
Score = 108 (43.1 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 48/186 (25%), Positives = 75/186 (40%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
++S G LGL D Y P VP + +S G H+L + + +WA
Sbjct: 2 LLSLGSNGNFQLGLNND-----EDVYSPQIVP-FDRAIEKISCGGNHTLLLDEDSQLWAC 55
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--CAAFASGVVSSAI--GDDGSLWVWG 144
G N + Q G E P + +V+ G S I D + G
Sbjct: 56 GDNRKGQCGYEVKEPLYNPLSPDYLRIFTRVSHERWVFLTCGWEFSVIVHADRRRVCSCG 115
Query: 145 KSKRGQLGLG-KDITEAIVPSRVEALAGEK-IVKVSFGWGHALAQTEDGKLFGWGYSADG 202
+ G+LG G + ++ + + L ++ I+ +S G H + T +G L+G G DG
Sbjct: 116 EGLSGELGQGNRSNSQGLREIDIPYLDDKEFIIDISAGLRHWICVTNEGNLYGCG---DG 172
Query: 203 RIGNLG 208
R G LG
Sbjct: 173 RKGQLG 178
Score = 57 (25.1 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE-KQDM 303
++V IA G +H+++ + G +L G N +G + K+D+
Sbjct: 281 DIVQIASGTEHNILRTKKGSVLIYGWNEHGNASNDDKRDV 320
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 36/124 (29%), Positives = 58/124 (46%)
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWV 142
GAV+ WG NN QLG E R + P V+ L V ++ + G ++
Sbjct: 24 GAVFGWGMNNAGQLGLSDEEDRES---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 80
Query: 143 WGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT-EDGKLFGWGYSAD 201
+G GQLG + + + P RV L G ++ +++ G H LA G ++ +G A
Sbjct: 81 FGAGSCGQLG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAK 139
Query: 202 GRIG 205
G++G
Sbjct: 140 GQLG 143
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 105 (42.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 29/90 (32%), Positives = 47/90 (52%)
Query: 116 LDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIV 175
L V V F VV + ++G ++ +G + GQLG G D+ P+ V+AL G
Sbjct: 902 LRAVQVSCGFHHSVV---LMENGDVYTFGYGQHGQLGHG-DVNSRGCPTLVQALPGPS-T 956
Query: 176 KVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
+V+ G H A DG++F +G + G++G
Sbjct: 957 QVTAGSNHTAALLMDGQVFTFGSFSKGQLG 986
Score = 81 (33.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 34 DGSQGALGLPTSLTGVGGDA-YEPTR--VPGLPSD-VTSVSAGHYHSLAVTNNGAVWAWG 89
+GS + L G DA Y + V L VT V+ G H+ + NG VW +G
Sbjct: 609 NGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFG 668
Query: 90 RNNEVQLGR--GAL 101
NN+ Q GR GA+
Sbjct: 669 VNNKGQCGRDTGAM 682
>UNIPROTKB|G4NC24 [details] [associations]
symbol:MGG_00456 "BTB domain and ankyrin repeat protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 INTERPRO:IPR000408 EMBL:CM001235 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 RefSeq:XP_003718611.1
ProteinModelPortal:G4NC24 EnsemblFungi:MGG_00456T0 GeneID:2674172
KEGG:mgr:MGG_00456 Uniprot:G4NC24
Length = 1598
Score = 127 (49.8 bits), Expect = 0.00020, P = 0.00020
Identities = 57/186 (30%), Positives = 79/186 (42%)
Query: 7 VVHNHV-NVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD 65
+VHN V + S + + G G G LGL Y P V G +D
Sbjct: 321 IVHNVVLSKFHSAVITTDPVSNLYIC-GVGRGGRLGLSDDQRV--RFTYVP--VQGALAD 375
Query: 66 --VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWND------PKRVEGLD 117
VT V G H++AVT+ G +W WG N QLG AL A ++ PK+V G
Sbjct: 376 RKVTQVVLGQDHTMAVTDKGELWTWGSNAYSQLGY-ALPPPAKKDEEPMSLAPKQVFGAL 434
Query: 118 QVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGL----GKDITEAIVPSRVEA-LAGE 172
+ V ++ + S S++ WGK+ GQL L + + P +V A L
Sbjct: 435 KKEVVIGVSASAIHSVAHTTNSVFCWGKNS-GQLALMDADSRSLEVQQTPRKVAASLFSA 493
Query: 173 KIVKVS 178
IV VS
Sbjct: 494 PIVMVS 499
>GENEDB_PFALCIPARUM|MAL7P1.38 [details] [associations]
symbol:MAL7P1.38 "regulator of chromosome
condensation protein, putative" species:5833 "Plasmodium
falciparum" [GO:0005634 "nucleus" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0030261 "chromosome
condensation" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0003682
GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030261 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012
EMBL:AL844506 RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 85 (35.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 24/89 (26%), Positives = 43/89 (48%)
Query: 111 KRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALA 170
++++ L Q + + + ++ L++WG R LG+ D +A P ++
Sbjct: 308 EKIQELSQKKINQLCGGQSFTVCLLNNNDLYIWGN--REILGMEYD-DDAYSPLELDFFK 364
Query: 171 GEKI-VK-VSFGWGHALAQTEDGKLFGWG 197
VK ++ G H L T++GKLFGWG
Sbjct: 365 KNNYTVKNITCGTDHCLVLTDNGKLFGWG 393
Score = 83 (34.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 56 PTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALES 103
PT +P LP+D+ V G H++ T + ++++G N+ LGR S
Sbjct: 31 PTAIPNLPNDIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSS 78
>UNIPROTKB|C0H4M6 [details] [associations]
symbol:MAL7P1.38 "Regulator of chromosome condensation,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS] [GO:0030261
"chromosome condensation" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0003682 GO:GO:0007049
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0030261
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012 EMBL:AL844506
RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 85 (35.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 24/89 (26%), Positives = 43/89 (48%)
Query: 111 KRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALA 170
++++ L Q + + + ++ L++WG R LG+ D +A P ++
Sbjct: 308 EKIQELSQKKINQLCGGQSFTVCLLNNNDLYIWGN--REILGMEYD-DDAYSPLELDFFK 364
Query: 171 GEKI-VK-VSFGWGHALAQTEDGKLFGWG 197
VK ++ G H L T++GKLFGWG
Sbjct: 365 KNNYTVKNITCGTDHCLVLTDNGKLFGWG 393
Score = 83 (34.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 56 PTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALES 103
PT +P LP+D+ V G H++ T + ++++G N+ LGR S
Sbjct: 31 PTAIPNLPNDIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSS 78
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 101 (40.6 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 116 LDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIV 175
L V V F VV + ++G ++ +G + GQLG G D+ P+ V+AL G
Sbjct: 815 LRAVQVSCGFHHSVV---LMENGDVYTFGYGQHGQLGHG-DVNSRGCPTLVQALPGPS-T 869
Query: 176 KVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
+V+ G H DG++F +G + G++G
Sbjct: 870 QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 899
Score = 81 (33.6 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 34 DGSQGALGLPTSLTGVGGDA-YEPTR--VPGLPSD-VTSVSAGHYHSLAVTNNGAVWAWG 89
+GS + L G DA Y + V L VT V+ G H+ + NG VW +G
Sbjct: 522 NGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFG 581
Query: 90 RNNEVQLGR--GAL 101
NN+ Q GR GA+
Sbjct: 582 VNNKGQCGRDTGAM 595
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 101 (40.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 116 LDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIV 175
L V V F VV + ++G ++ +G + GQLG G D+ P+ V+AL G
Sbjct: 902 LRAVQVSCGFHHSVV---LMENGDVYTFGYGQHGQLGHG-DVNSRGCPTLVQALPGPS-T 956
Query: 176 KVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
+V+ G H DG++F +G + G++G
Sbjct: 957 QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 81 (33.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 34 DGSQGALGLPTSLTGVGGDA-YEPTR--VPGLPSD-VTSVSAGHYHSLAVTNNGAVWAWG 89
+GS + L G DA Y + V L VT V+ G H+ + NG VW +G
Sbjct: 609 NGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFG 668
Query: 90 RNNEVQLGR--GAL 101
NN+ Q GR GA+
Sbjct: 669 VNNKGQCGRDTGAM 682
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 101 (40.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 116 LDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIV 175
L V V F VV + ++G ++ +G + GQLG G D+ P+ V+AL G
Sbjct: 902 LRAVQVSCGFHHSVV---LMENGDVYTFGYGQHGQLGHG-DVNSRGCPTLVQALPGPS-T 956
Query: 176 KVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
+V+ G H DG++F +G + G++G
Sbjct: 957 QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 81 (33.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 34 DGSQGALGLPTSLTGVGGDA-YEPTR--VPGLPSD-VTSVSAGHYHSLAVTNNGAVWAWG 89
+GS + L G DA Y + V L VT V+ G H+ + NG VW +G
Sbjct: 609 NGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFG 668
Query: 90 RNNEVQLGR--GAL 101
NN+ Q GR GA+
Sbjct: 669 VNNKGQCGRDTGAM 682
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 101 (40.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 116 LDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIV 175
L V V F VV + ++G ++ +G + GQLG G D+ P+ V+AL G
Sbjct: 940 LRAVQVSCGFHHSVV---LMENGDVYTFGYGQHGQLGHG-DVNSRGCPTLVQALPGPS-T 994
Query: 176 KVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
+V+ G H DG++F +G + G++G
Sbjct: 995 QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 81 (33.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 34 DGSQGALGLPTSLTGVGGDA-YEPTR--VPGLPSD-VTSVSAGHYHSLAVTNNGAVWAWG 89
+GS + L G DA Y + V L VT V+ G H+ + NG VW +G
Sbjct: 647 NGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFG 706
Query: 90 RNNEVQLGR--GAL 101
NN+ Q GR GA+
Sbjct: 707 VNNKGQCGRDTGAM 720
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 101 (40.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 116 LDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIV 175
L V V F VV + ++G ++ +G + GQLG G D+ P+ V+AL G
Sbjct: 940 LRAVQVSCGFHHSVV---LMENGDVYTFGYGQHGQLGHG-DVNSRGCPTLVQALPGPS-T 994
Query: 176 KVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
+V+ G H DG++F +G + G++G
Sbjct: 995 QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 81 (33.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 34 DGSQGALGLPTSLTGVGGDA-YEPTR--VPGLPSD-VTSVSAGHYHSLAVTNNGAVWAWG 89
+GS + L G DA Y + V L VT V+ G H+ + NG VW +G
Sbjct: 647 NGSSSVISKDGELYMFGKDAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFG 706
Query: 90 RNNEVQLGR--GAL 101
NN+ Q GR GA+
Sbjct: 707 VNNKGQCGRDTGAM 720
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 101 (40.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 45/189 (23%), Positives = 83/189 (43%)
Query: 21 MRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEP-TRVPGLPSDVTSVSAGH--YHSL 77
M++ASG + G +LG+ G P T+ P + S GH H+L
Sbjct: 443 MKTASGKIYYT---GKYQSLGIKQGGPSAGKWVELPITKSP----KIIQFSVGHDGSHAL 495
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWN-DPKRVEGLDQVNVCAAFASGVVSSAIGD 136
V ++G+++ G ++ + G R + PK++ ++ V + + SS I
Sbjct: 496 LVADDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVISTACNNGSSSVISK 555
Query: 137 DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGW 196
DG L+++GK + D T S V L G + +V+ G H ++G+++ +
Sbjct: 556 DGELYMFGKD-----AIYSDST-----SLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTF 605
Query: 197 GYSADGRIG 205
G + G+ G
Sbjct: 606 GVNNKGQCG 614
Score = 99 (39.9 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 116 LDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIV 175
L V V F V+ + ++G ++ +G + GQLG G D+ P+ V+AL G
Sbjct: 840 LRAVQVSCGFHHSVI---LMENGDVYTFGYGQHGQLGHG-DVNSRGCPTLVQALPGPS-T 894
Query: 176 KVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
+V+ G H DG++F +G + G++G
Sbjct: 895 QVTAGSNHTAILLMDGQVFTFGSFSKGQLG 924
Score = 82 (33.9 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 27/79 (34%), Positives = 36/79 (45%)
Query: 26 GTAVVSFG--DGSQGALGLPTSLTGVGGDA-YEPTR--VPGLPSD-VTSVSAGHYHSLAV 79
G V+S +GS + L G DA Y + V L VT V+ G H+ +
Sbjct: 537 GKIVISTACNNGSSSVISKDGELYMFGKDAIYSDSTSLVTDLKGHFVTQVAMGKAHTCVL 596
Query: 80 TNNGAVWAWGRNNEVQLGR 98
NG VW +G NN+ Q GR
Sbjct: 597 MKNGEVWTFGVNNKGQCGR 615
Score = 80 (33.2 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHP---VSISSG 320
+ V ++CGF HS++L NG + + G +GQLG + P + P +++G
Sbjct: 840 LRAVQVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAG 899
Query: 321 LGHS 324
H+
Sbjct: 900 SNHT 903
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 98 (39.6 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 47/189 (24%), Positives = 83/189 (43%)
Query: 21 MRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGH--YHSLA 78
M++ASG + G +LG+ G + V P + S GH H+L
Sbjct: 534 MKTASGKIYYT---GKYQSLGIKQG--GPSSGKWVELPVTKSPK-IVQFSVGHDGSHALL 587
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWN-DPKRVEGLD-QVNVCAAFASGVVSSAIGD 136
V +G+V+ G ++ + G R PK++ L+ ++ V A +G SS +
Sbjct: 588 VAEDGSVFFTGSASKGEDGESTKSRRQPKPYKPKKMIKLETKMAVYTACNNGS-SSIVTK 646
Query: 137 DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGW 196
DG L+++GK + D T +V L G + +V+ G H T+ G+++ +
Sbjct: 647 DGELYMFGKD-----AIYSDST-----CQVSDLKGHFVTQVAMGKAHTCVLTKSGEVWTF 696
Query: 197 GYSADGRIG 205
G + G+ G
Sbjct: 697 GVNNKGQCG 705
Score = 82 (33.9 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHP---VSISSG 320
+ V ++CGF HS+VL NG + + G +GQLG + P + P +++G
Sbjct: 925 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGPSTQVTAG 984
Query: 321 LGHSLAI 327
H+ +
Sbjct: 985 SNHTAVL 991
>WB|WBGene00017190 [details] [associations]
symbol:F07B7.12 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR027047
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005 EMBL:FO081059
GeneTree:ENSGT00390000011403 KO:K10693 PANTHER:PTHR12846
eggNOG:NOG240798 RefSeq:NP_505281.1 ProteinModelPortal:Q965Y9
SMR:Q965Y9 STRING:Q965Y9 PaxDb:Q965Y9 EnsemblMetazoa:F07B7.12
GeneID:184118 KEGG:cel:CELE_F07B7.12 UCSC:F07B7.12 CTD:184118
WormBase:F07B7.12 InParanoid:Q965Y9 OMA:KESRITH NextBio:923582
Uniprot:Q965Y9
Length = 1900
Score = 103 (41.3 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC 122
++S++ G H +AVT NG ++ WG NN Q GR +ES +T + P+ G + +C
Sbjct: 615 ISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGR--VESTSTTSSPRH-SGRQEYQIC 668
Score = 68 (29.0 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
V+V ++CG H+++L + + + GSN +GQLG
Sbjct: 767 VKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLG 800
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.134 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 372 355 0.00080 117 3 11 22 0.45 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 210
No. of states in DFA: 614 (65 KB)
Total size of DFA: 232 KB (2124 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.16u 0.11s 26.27t Elapsed: 00:00:01
Total cpu time: 26.31u 0.11s 26.42t Elapsed: 00:00:01
Start: Sat May 11 04:19:52 2013 End: Sat May 11 04:19:53 2013
WARNINGS ISSUED: 1