BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042844
(372 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 155/353 (43%), Gaps = 65/353 (18%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTN 81
S SG V S+G G G LG G D + P + L + ++ G H LAVT
Sbjct: 83 SQSGMEVYSWGWGDFGRLG-----HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137
Query: 82 NGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLW 141
G V +WGRN QLG G E P++++ + + + A ++A+ +DG L+
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLV---PQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLY 194
Query: 142 VWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD 201
WG + G LGLG D T+ +VP RV + GEK+ V+ GW H ++ + G L+ +G+S
Sbjct: 195 GWGWGRYGNLGLG-DRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 253
Query: 202 GRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLV 261
G++G+ LE + + + +S+S I +
Sbjct: 254 GQLGH--GDLEDHLIPHKL-------EALSNSFISQ------------------------ 280
Query: 262 EGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF----HPVSI 317
I+ G+ H++ L +G L G N +GQ+G PV + F V +
Sbjct: 281 -------ISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQV 333
Query: 318 SSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQL--GRMGPDNVPLVVEGL 368
S G H+LA+ E + + +WG + QL G N P ++E L
Sbjct: 334 SCGWRHTLAVTERNN---------VFAWGRGTNGQLGIGESVDRNFPKIIEAL 377
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 137/351 (39%), Gaps = 104/351 (29%)
Query: 58 RVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLD 117
V P V +SAG HS+A+ + V +WGR + QLG G E R + ++G
Sbjct: 9 EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ 68
Query: 118 QVNVCAAFASGVVSS------------------------------------------AIG 135
V+V V S A G
Sbjct: 69 IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128
Query: 136 D--------DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQ 187
D +G + WG+++ GQLGLG D +++VP +++A G +I V+ G H A
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV 187
Query: 188 TEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGME 247
TEDG L+GWG+ GR GNLG L DR +++ S G E
Sbjct: 188 TEDGDLYGWGW---GRYGNLG-------LGDRTDRLV-------------PERVTSTGGE 224
Query: 248 KEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP 307
K +ACG+ H++ + +G L + G + YGQLG + + P
Sbjct: 225 KMSM-----------------VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIP 267
Query: 308 VDI----NFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
+ N IS G H++A+ + WGWN+ Q+G
Sbjct: 268 HKLEALSNSFISQISGGWRHTMALTSDGK---------LYGWGWNKFGQVG 309
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTS-VSAGHYHSLAVTNNGAVWAWGR 90
+G G G LGL G D P RV + S V+ G H+++V+ +GA++ +G
Sbjct: 196 WGWGRYGNLGL-----GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGW 250
Query: 91 NNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQ 150
+ QLG G LE P ++E L + + A+ DG L+ WG +K GQ
Sbjct: 251 SKYGQLGHGDLEDHLI---PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQ 307
Query: 151 LGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG----- 205
+G+G ++ + P +V +K+V+VS GW H LA TE +F WG +G++G
Sbjct: 308 VGVGNNLDQC-SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESV 366
Query: 206 --NLGKALESSPLDSNIDRSSESDQEISSSTIEKA 238
N K +E+ +D S Q I SS I+ +
Sbjct: 367 DRNFPKIIEALSVD------GASGQHIESSNIDPS 395
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 16/117 (13%)
Query: 261 VEGVEVVDIACGFDHSLVLGRNGV-LLSCGSNVYGQLGREKQDMGMFPVDIN-FHPV--- 315
++G ++V + CG DH++ ++G+ + S G +G+LG P+ I H +
Sbjct: 64 LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIK 123
Query: 316 SISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN--VPLVVEGLEG 370
I+ G H LA+ + SWG N++ QLG ++ VP ++ EG
Sbjct: 124 QIACGDSHCLAVTMEGE---------VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEG 171
Score = 32.0 bits (71), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 20/115 (17%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN----FHPVSISSG 320
+V+ I+ G HS+ L ++ S G GQLG + P ++ VS++ G
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75
Query: 321 LGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN-----VPLVVEGLEG 370
H++A + + SWGW GR+G N PL ++ L G
Sbjct: 76 ADHTVAYSQ--------SGMEVYSWGWG---DFGRLGHGNSSDLFTPLPIKALHG 119
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 90/151 (59%), Gaps = 5/151 (3%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V V+ G YHSL +T++G V+AWG NN Q+G G S A P+RV G Q V +
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG---STANQPIPRRVTGCLQNKVVMSI 210
Query: 126 ASG-VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
A G + S A+ D G ++VWG + GQLGLG + P RV AL G ++ +V+ G+ H
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQP-TPCRVAALQGIRVQRVACGYAHT 269
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
L T++G+++ WG ++ G++G K+ +S P
Sbjct: 270 LVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 300
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 128/289 (44%), Gaps = 25/289 (8%)
Query: 77 LAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA-AFASGVVSSAIG 135
L T N ++ G N LG G ++S +P+R++ L + + ++ SG
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGVGDIQSTI---EPRRLDSLTGKKIASLSYGSGPHIVLAT 115
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA-LAGEKIVKVSFGWGHALAQTEDGKLF 194
DG ++ WG + QLG G +VP + L+ +++++V+ G H+L T DG++F
Sbjct: 116 TDGEVFTWGHNAYSQLGNGT-TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 195 GWGYSADGRIGNLGKALESSP------LDSNIDRSSESDQEISSSTIEKAQKLV------ 242
WGY+ G++G+ A + P L + + S Q S + ++ + V
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGN 234
Query: 243 -SEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQ 301
G+ P ++G+ V +ACG+ H+LVL G + + G+N YGQLG +
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 294
Query: 302 DMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARG-IVSWGWNR 349
+P PV + +A C ++ G + WG R
Sbjct: 295 SNQSYPT-----PVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQCR 338
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 63/252 (25%)
Query: 129 VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG-HALAQ 187
V+ + + D+ ++V G + G LG+G DI I P R+++L G+KI +S+G G H +
Sbjct: 58 VLYTTVNDE--IFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLA 114
Query: 188 TEDGKLFGWGYSADGRIGN--LGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEG 245
T DG++F WG++A ++GN L + +N+
Sbjct: 115 TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNK---------------------- 152
Query: 246 MEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM 305
+V+++ACG HSLVL +G + + G N GQ+G
Sbjct: 153 -------------------QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQP 193
Query: 306 FPVDI-----NFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQ--LGRMGP 358
P + N +SI+ G S+A+ + TG + WG+N + Q LG G
Sbjct: 194 IPRRVTGCLQNKVVMSIACGQMCSMAVVD------TGE---VYVWGYNGNGQLGLGSSGN 244
Query: 359 DNVPLVVEGLEG 370
P V L+G
Sbjct: 245 QPTPCRVAALQG 256
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 5/151 (3%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V V+ G YHSL +T++G V+AWG NN Q+G G S A P+RV G Q V
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG---STANQPIPRRVTGCLQNKVVMNI 210
Query: 126 ASG-VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
A G + S A+ D G ++VWG + GQLGLG + P RV AL G ++ +V+ G+ H
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQP-TPCRVAALQGIRVQRVACGYAHT 269
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
L T++G+++ WG ++ G++G K+ +S P
Sbjct: 270 LVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 300
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 128/289 (44%), Gaps = 25/289 (8%)
Query: 77 LAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA-AFASGVVSSAIG 135
L T N ++ G N LG G ++S +P+R++ L + + ++ SG
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGVGDIQSTI---EPRRLDSLTGKKIASLSYGSGPHIVLAT 115
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA-LAGEKIVKVSFGWGHALAQTEDGKLF 194
DG ++ WG + QLG G +VP + L+ +++++V+ G H+L T DG++F
Sbjct: 116 TDGEVFTWGHNAYSQLGNGT-TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 195 GWGYSADGRIGNLGKALESSP------LDSNIDRSSESDQEISSSTIEKAQKLV------ 242
WGY+ G++G+ A + P L + + + Q S + ++ + V
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGN 234
Query: 243 -SEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQ 301
G+ P ++G+ V +ACG+ H+LVL G + + G+N YGQLG +
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 294
Query: 302 DMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARG-IVSWGWNR 349
+P PV + +A C ++ G + WG R
Sbjct: 295 SNQSYPT-----PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCR 338
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 114/270 (42%), Gaps = 66/270 (24%)
Query: 114 EGLDQVNVCAAFASG---VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALA 170
E L + F S V+ + + D+ ++V G + G LG+G DI I P R+++L
Sbjct: 40 EELQLIRQACVFGSAGNEVLYTTVNDE--IFVLGTNCSGCLGVG-DIQSTIEPRRLDSLT 96
Query: 171 GEKIVKVSFGWG-HALAQTEDGKLFGWGYSADGRIGN--LGKALESSPLDSNIDRSSESD 227
G+KI +S+G G H + T DG++F WG++A ++GN L + +N+
Sbjct: 97 GKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNK---- 152
Query: 228 QEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLS 287
+V+++ACG HSLVL +G + +
Sbjct: 153 -------------------------------------QVIEVACGSYHSLVLTSDGEVFA 175
Query: 288 CGSNVYGQLGREKQDMGMFPVDI-----NFHPVSISSGLGHSLAICEVRSSNVTGGARGI 342
G N GQ+G P + N ++I+ G S+A+ + TG +
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVD------TGE---V 226
Query: 343 VSWGWNRSSQ--LGRMGPDNVPLVVEGLEG 370
WG+N + Q LG G P V L+G
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 97/176 (55%), Gaps = 5/176 (2%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V V+ G YHSL +T++G V+AWG NN Q+G G+ ++ P+RV G Q V
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPI---PRRVTGCLQNKVVVTI 210
Query: 126 ASG-VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
A G + A+ D G ++VWG + GQLGLG + P RV AL G ++ +V+ G+ H
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQP-TPCRVAALQGIRVQRVACGYAHT 269
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQK 240
L T++G+++ WG ++ G++G K+ +S P +++ + ST A K
Sbjct: 270 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAK 325
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 128/289 (44%), Gaps = 25/289 (8%)
Query: 77 LAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV-CAAFASGVVSSAIG 135
L T N ++ G N LG G ++S +P+R++ L+ + C ++ SG
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTI---EPRRLDSLNGKKIACLSYGSGPHIVLAT 115
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA-LAGEKIVKVSFGWGHALAQTEDGKLF 194
+G ++ WG + QLG G +VP + L+ +++++V+ G H+L T DG++F
Sbjct: 116 TEGEVFTWGHNAYSQLGNGT-TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 195 GWGYSADGRIGNLGKALESSP------LDSNIDRSSESDQEISSSTIEKAQKLV------ 242
WGY+ G++G+ + P L + + + Q + ++ + V
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 234
Query: 243 -SEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQ 301
G+ P ++G+ V +ACG+ H+LVL G + + G+N YGQLG +
Sbjct: 235 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294
Query: 302 DMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARG-IVSWGWNR 349
+P PV++ +A C ++ G + WG R
Sbjct: 295 SNQSYPT-----PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCR 338
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 108/252 (42%), Gaps = 63/252 (25%)
Query: 129 VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG-HALAQ 187
V+ + + D+ ++V G + G LGLG D+ I P R+++L G+KI +S+G G H +
Sbjct: 58 VLYTTVNDE--IFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLA 114
Query: 188 TEDGKLFGWGYSADGRIGN--LGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEG 245
T +G++F WG++A ++GN L + +N+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNK---------------------- 152
Query: 246 MEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM 305
+V+++ACG HSLVL +G + + G N GQ+G
Sbjct: 153 -------------------QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP 193
Query: 306 FPVDI-----NFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQ--LGRMGP 358
P + N V+I+ G +A+ + TG + WG+N + Q LG G
Sbjct: 194 IPRRVTGCLQNKVVVTIACGQMCCMAVVD------TGE---VYVWGYNGNGQLGLGNSGN 244
Query: 359 DNVPLVVEGLEG 370
P V L+G
Sbjct: 245 QPTPCRVAALQG 256
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 97/176 (55%), Gaps = 5/176 (2%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V V+ G YHSL +T++G V+AWG NN Q+G G+ ++ P+RV G Q V
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPI---PRRVTGCLQNKVVVTI 210
Query: 126 ASG-VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
A G + A+ D G ++VWG + GQLGLG + P RV AL G ++ +V+ G+ H
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQP-TPCRVAALQGIRVQRVACGYAHT 269
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQK 240
L T++G+++ WG ++ G++G K+ +S P +++ + ST A K
Sbjct: 270 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAK 325
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 128/289 (44%), Gaps = 25/289 (8%)
Query: 77 LAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV-CAAFASGVVSSAIG 135
L T N ++ G N LG G ++S +P+R++ L+ + C ++ SG
Sbjct: 59 LYTTVNDEIFVLGTNCCGCLGLGDVQSTI---EPRRLDSLNGKKIACLSYGSGPHIVLAT 115
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEA-LAGEKIVKVSFGWGHALAQTEDGKLF 194
+G ++ WG + QLG G +VP + L+ +++++V+ G H+L T DG++F
Sbjct: 116 TEGEVFTWGHNAYSQLGNGT-TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 195 GWGYSADGRIGNLGKALESSP------LDSNIDRSSESDQEISSSTIEKAQKLV------ 242
WGY+ G++G+ + P L + + + Q + ++ + V
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 234
Query: 243 -SEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQ 301
G+ P ++G+ V +ACG+ H+LVL G + + G+N YGQLG +
Sbjct: 235 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294
Query: 302 DMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARG-IVSWGWNR 349
+P PV++ +A C ++ G + WG R
Sbjct: 295 SNQSYPT-----PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCR 338
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 108/252 (42%), Gaps = 63/252 (25%)
Query: 129 VVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG-HALAQ 187
V+ + + D+ ++V G + G LGLG D+ I P R+++L G+KI +S+G G H +
Sbjct: 58 VLYTTVNDE--IFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLA 114
Query: 188 TEDGKLFGWGYSADGRIGN--LGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEG 245
T +G++F WG++A ++GN L + +N+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNK---------------------- 152
Query: 246 MEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM 305
+V+++ACG HSLVL +G + + G N GQ+G
Sbjct: 153 -------------------QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQP 193
Query: 306 FPVDI-----NFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQ--LGRMGP 358
P + N V+I+ G +A+ + TG + WG+N + Q LG G
Sbjct: 194 IPRRVTGCLQNKVVVTIACGQMCCMAVVD------TGE---VYVWGYNGNGQLGLGNSGN 244
Query: 359 DNVPLVVEGLEG 370
P V L+G
Sbjct: 245 QPTPCRVAALQG 256
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 128/270 (47%), Gaps = 45/270 (16%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTR-VPGLPSDVTSVSAGHYHSLAVTNNGAVWA 87
V+S GD S+G LG G+ EP + + L D+ VS G HSLAV + G V+A
Sbjct: 44 VLSCGDNSRGQLG---RRGAQRGELPEPIQALETLIVDL--VSCGKEHSLAVCHKGRVFA 98
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG +E QLG G E + PK++ L+ + + S A+ D ++ WGK+
Sbjct: 99 WGAGSEGQLGIG--EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNS 156
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNL 207
GQLGLGK+ P RV +L G + +V+ G H+ A + G FGWG ++ G++
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALS 216
Query: 208 GKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVV 267
G+ + P+ SN K +S G ++ + VV
Sbjct: 217 GRNV---PVQSN--------------------KPLSVGA--------------LKNLGVV 239
Query: 268 DIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
I+CG H+ VL ++G + + G N GQLG
Sbjct: 240 YISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 139/318 (43%), Gaps = 51/318 (16%)
Query: 58 RVPGLP-SDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL 116
R G P +++ ++G HSL + N V + G N+ QLGR + R +P ++ L
Sbjct: 16 RTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQ-RGELPEP--IQAL 72
Query: 117 DQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVK 176
+ + V S A+ G ++ WG GQLG+G+ + P ++ L KI++
Sbjct: 73 ETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQ 132
Query: 177 VSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIE 236
VS G H+LA ++D ++F WG ++ G++G LGK S S Q + S
Sbjct: 133 VSCGHYHSLALSKDSQVFSWGKNSHGQLG-LGKEFP----------SQASPQRVRS---- 177
Query: 237 KAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQL 296
+EG+ + +A G HS L G GSN GQL
Sbjct: 178 ------------------------LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL 213
Query: 297 GREKQDMGMFPVDINFHPVSISS--GLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
+++ PV N P+S+ + LG C + V + ++G NRS QLG
Sbjct: 214 ALSGRNV---PVQSN-KPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 355 RM-GPDNV-PLVVEGLEG 370
P+ P +VE ++G
Sbjct: 270 YSPTPEKRGPQLVERIDG 287
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 12/179 (6%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRV---PGLPSDVTSVSAGHYHSLAVT 80
+ + V S+G S G LGL P RV G+P + V+AG HS A++
Sbjct: 144 SKDSQVFSWGKNSHGQLGLGKEFPSQAS----PQRVRSLEGIP--LAQVAAGGAHSFALS 197
Query: 81 NNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSL 140
G + WG N+ QL N P V L + V ++ + DG +
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 141 WVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTE-DGKLFGWGY 198
+ +G ++ GQLG E P VE + G + ++ G H LA G++ +G+
Sbjct: 258 FTFGDNRSGQLGYS-PTPEKRGPQLVERIDG-LVSQIDCGSYHTLAYVHTTGQVVSFGH 314
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 49/322 (15%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V+S G + G LG+P P + L V V+AG H+LA T G+V+ W
Sbjct: 122 VLSCGSNAFGQLGVPHGPR----KCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQW 177
Query: 89 GR---NNEVQLGRGA-LESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
G ++ +L G L T +P RV GL+ A A S+++ D G L+VWG
Sbjct: 178 GTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWG 237
Query: 145 KSKRGQLGLGKDITEAI---VPSRVEA--LAGEKIVKVSFGWGHALAQTEDGKLFGWGYS 199
++K GQL + A+ +P R+EA EK+ V GW H +A+TE GK+F WG +
Sbjct: 238 RNKHGQLA-----SRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRA 292
Query: 200 ADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPF 259
G LG+ LE + +E+ L +G + P+
Sbjct: 293 ---DYGQLGRRLEPPE---------------AQKPVEQDSSLAFQGPQNSVPSPL----H 330
Query: 260 LVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVS--- 316
+ G +I+CG +H+L + R+ S G N +G G + P + P S
Sbjct: 331 CLTG--ATEISCGSEHNLAVIRDKC-CSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSR 387
Query: 317 ---ISSGLGHSLAICEVRSSNV 335
+ G GHSLA+C++ + V
Sbjct: 388 LLLVGCGAGHSLAVCQLPAHPV 409
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 156/391 (39%), Gaps = 67/391 (17%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VTSVSAGHYHSLAVTN 81
++ + ++G S G LGL G D + P ++ + SV+ G HS VT+
Sbjct: 12 SAAAVLFAWGANSYGQLGL-----GHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTD 66
Query: 82 NGAVWAWGRNNEVQLGRGALES--RATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
G ++ G N + QLG G E R T P R + QV F + + + G
Sbjct: 67 GGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDF-----TIMLTEKGQ 121
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGW--G 197
+ G + GQLG+ + +VP +E L EK+V V+ G HALA T G +F W G
Sbjct: 122 VLSCGSNAFGQLGVPHGPRKCVVPQAIECLR-EKVVCVAAGLRHALATTATGSVFQWGTG 180
Query: 198 YSADGRIGNLGKAL----------ESSPLDSNIDRSSESDQEISSSTIEKAQKLV----- 242
++ GR G+ L + L+++ + + + S+S + + V
Sbjct: 181 LASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNK 240
Query: 243 -SEGMEKEKYMPIIW--EPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
+ + ++P+ E + +V + G+ H + G + + G YGQLGR
Sbjct: 241 HGQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRR 300
Query: 300 ----------KQDMGMF----------PVDINFHPVSISSGLGHSLAICEVRSSNVTGGA 339
+QD + P+ IS G H+LA+ +R
Sbjct: 301 LEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAV--IRDK------ 352
Query: 340 RGIVSWGWNRSSQLGRMGPDNV--PLVVEGL 368
SWGWN G NV P V+ L
Sbjct: 353 --CCSWGWNEHGMCGDGTESNVWTPTPVQAL 381
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 107/252 (42%), Gaps = 60/252 (23%)
Query: 124 AFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVK-VSFGWG 182
+ AS VS+A L+ WG + GQLGLG + +P ++ +K V+ G G
Sbjct: 5 SCASETVSAA----AVLFAWGANSYGQLGLGHK-EDVFLPQQLSDFCQAGCIKSVTGGGG 59
Query: 183 HALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLV 242
H+ T+ G LF G + DG++G LG +E+ TI K
Sbjct: 60 HSAVVTDGGDLFVCGLNKDGQLG-LGHT-----------------EEVLRFTICKP---- 97
Query: 243 SEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG-REKQ 301
+ G + +ACG+D +++L G +LSCGSN +GQLG
Sbjct: 98 ------------------LRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGP 139
Query: 302 DMGMFPVDINF---HPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGP 358
+ P I V +++GL H+LA + TG + WG +S R+ P
Sbjct: 140 RKCVVPQAIECLREKVVCVAAGLRHALA------TTATG---SVFQWGTGLASSGRRLCP 190
Query: 359 -DNVPLVVEGLE 369
N+PL + E
Sbjct: 191 GQNLPLFLTAKE 202
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 124/311 (39%), Gaps = 50/311 (16%)
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSA-I 134
S V+ ++AWG N+ QLG G E P+++ Q + G SA +
Sbjct: 8 SETVSAAAVLFAWGANSYGQLGLGHKEDVFL---PQQLSDFCQAGCIKSVTGGGGHSAVV 64
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
D G L+V G +K GQLGLG E + + + L G I +V+ GW + TE G++
Sbjct: 65 TDGGDLFVCGLNKDGQLGLGH-TEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVL 123
Query: 195 GWGYSADGRIGNLGKALESSPLDSNIDRSSESDQE----------------ISSSTIEKA 238
G +A G++G + P + ++ E +E + S +
Sbjct: 124 SCGSNAFGQLG-----VPHGPRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWG 178
Query: 239 QKLVSEG--MEKEKYMPIIW---EPFLVEGVEVVDIAC---GFDHSLVLGRNGVLLSCGS 290
L S G + + +P+ EP V G+E C G DHS L G L G
Sbjct: 179 TGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGR 238
Query: 291 NVYGQLGREKQDMGMFPVDINFHP------VSISSGLGHSLAICEVRSSNVTGGARGIVS 344
N +GQL + + P I H ++ SG H +A E + +
Sbjct: 239 NKHGQLASRAVFLPL-PQRIEAHYFQDEKVTAVWSGWTHLVAKTETGK---------VFT 288
Query: 345 WGWNRSSQLGR 355
WG QLGR
Sbjct: 289 WGRADYGQLGR 299
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 151/349 (43%), Gaps = 76/349 (21%)
Query: 19 IFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT---SVSAGHYH 75
+F+ S G V + G+G+ G LGL GV + P ++P L V +V +G H
Sbjct: 3031 LFIVSQDGK-VYACGEGTNGRLGL-----GVTHNVPLPHQLPVLRQYVVKKVAVHSGGKH 3084
Query: 76 SLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIG 135
+LA+T +G V++WG + +LG G +R T + P+ VE L + S+AI
Sbjct: 3085 ALALTLDGKVFSWGEGEDGKLGHG---NRTTLDKPRLVEALRAKKIRDVACGSSHSAAIS 3141
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGW--GHALAQTEDGKL 193
G L+ WG + G+LG G + T+ + P V ALAG ++V+V+ G LA TEDG +
Sbjct: 3142 SQGELYTWGLGEYGRLGHGDNTTQ-LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAV 3200
Query: 194 FGWGYSADGRIGNLGKA-LESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYM 252
F WG DG G LG+ E S I+R S
Sbjct: 3201 FSWG---DGDFGKLGRGGSEGSDTPHEIERLS---------------------------- 3229
Query: 253 PIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG-------REKQDMGM 305
G+ VV I CG SL L R G + + G Y +LG R+ Q +G
Sbjct: 3230 ----------GIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGG 3279
Query: 306 FPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
H ++ G H LA+ + A + +WG N Q G
Sbjct: 3280 LRGRRVIH---VAVGALHCLAVTD---------AGQVYAWGDNDHGQQG 3316
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 138/315 (43%), Gaps = 67/315 (21%)
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFAS 127
+V++G H LA+T G V+AWG + +LG G +R +++ PK VE L+ ++V
Sbjct: 4140 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHG---NRMSYDRPKLVEHLNGMSVADIACG 4196
Query: 128 GVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--L 185
S+AI G + WGK + G+LG G D + + P VEAL G + + ++ G G A L
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHG-DSEDQLRPKLVEALLGYRAIDIACGSGDAQTL 4255
Query: 186 AQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEG 245
T+D ++ WG DG G LG+ S+G
Sbjct: 4256 CITDDDNVWSWG---DGDYGKLGRG-------------------------------GSDG 4281
Query: 246 MEKEKYMPIIWEPFLVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQD 302
+ P+ +E G+ VV + CG S+ L ++G + + G + +LG D
Sbjct: 4282 CKL---------PYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4332
Query: 303 MGMFPVDINF----HPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQL--GRM 356
P + +SI++G H +A + + + +WG N QL G +
Sbjct: 4333 HVRRPKKVAALQGKKIISIATGSLHCVACSD---------SGEVYTWGDNDEGQLGDGTV 4383
Query: 357 GPDNVPLVVEGLEGE 371
P +V L+G+
Sbjct: 4384 TAIQRPRLVAALQGK 4398
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 143/336 (42%), Gaps = 51/336 (15%)
Query: 55 EPTRVPGLPSDVTSVSAGHY---HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPK 111
EP + + DV AGH H LA+ +N ++WG + +LG G +RA P
Sbjct: 604 EPLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV---PT 660
Query: 112 RVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAG 171
++ L+Q V + + S+AI G+L WG+ +LG G ++ P+ V AL+
Sbjct: 661 KIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSL-PTLVVALSD 719
Query: 172 EKIVKVSFGWG--HALAQTEDGKLFGWGYSADGRIGN------LGKAL-ESSPLDSNIDR 222
+V V+ G G H+LA T +G +F WG G++GN L L ES P +
Sbjct: 720 HMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFA 779
Query: 223 SSESDQEISSS----TIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVE---VVDIACGFDH 275
S+ +SS T KA L + +E+ + P LV ++ +VD+A H
Sbjct: 780 GSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSV--PRLVSSLQHKRIVDVAVSVAH 837
Query: 276 SLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNV 335
L L +G + G N Q+ P S+SS L + S
Sbjct: 838 CLALSSSGEVFGWGRNDSQQIC----------------PASVSS---EPLLRTPILVSLP 878
Query: 336 TGGARGIV-----SWGWNRSSQLGRMGPDNVPLVVE 366
T A GI S W +SS G P P VV+
Sbjct: 879 TFPASGIACTSAQSLVWTQSSHQGV--PRRAPFVVD 912
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGL----PSDVTSVSAGHYHSLA 78
+ASG V+++G G G LG G D P V L D+ + +G +L
Sbjct: 4204 TASGH-VLTWGKGRYGRLG-----HGDSEDQLRPKLVEALLGYRAIDI-ACGSGDAQTLC 4256
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG 138
+T++ VW+WG + +LGRG + P ++E L + V S A+ G
Sbjct: 4257 ITDDDNVWSWGDGDYGKLGRGGSDG---CKLPYKIESLAGLGVVKVECGSQFSVALTKSG 4313
Query: 139 SLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGY 198
+++ WGK +LG G + P +V AL G+KI+ ++ G H +A ++ G+++ WG
Sbjct: 4314 AVYTWGKGDFHRLGHG-SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGD 4372
Query: 199 SADGRIGN 206
+ +G++G+
Sbjct: 4373 NDEGQLGD 4380
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWG 89
S+GDG G LG G P ++ L V V G S+A+T +GAV+ WG
Sbjct: 4265 SWGDGDYGKLG-----RGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWG 4319
Query: 90 RNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRG 149
+ + +LG G+++ PK+V L + + + A D G ++ WG + G
Sbjct: 4320 KGDFHRLGHGSVDH---VRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEG 4376
Query: 150 QLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALA 186
QLG G +T P V AL G+ IVKV+ G H LA
Sbjct: 4377 QLGDGT-VTAIQRPRLVAALQGKHIVKVTCGSAHTLA 4412
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 6/133 (4%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV-CAAFASGVVSSA 133
+LA+T +GAV++WG + +LGRG E T ++ +R+ G+ V + C A S ++ A
Sbjct: 3190 QTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRA 3249
Query: 134 IGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKL 193
G +W WGK +LG G D P + L G +++ V+ G H LA T+ G++
Sbjct: 3250 ----GEVWTWGKGDYYRLGHGGD-QHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 3304
Query: 194 FGWGYSADGRIGN 206
+ WG + G+ G+
Sbjct: 3305 YAWGDNDHGQQGS 3317
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 26 GTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVT---SVSAGHYHSLAVTNN 82
G ++++G G+ LG G D PT V L + ++ +G HSLA+T+
Sbjct: 686 GGNLLTWGRGTYARLG-----HGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 740
Query: 83 GAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWV 142
G V+AWG + +LG G P VE L +V FA S A+ +G L+
Sbjct: 741 GLVFAWGDGDYGKLGNGNCNGSL---QPILVESLPRVQ--RVFAGSQFSVALSSEGQLYT 795
Query: 143 WGKSK-RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD 201
WGK+ G + + + VP V +L ++IV V+ H LA + G++FGWG +
Sbjct: 796 WGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDS 855
Query: 202 GRI 204
+I
Sbjct: 856 QQI 858
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 124/308 (40%), Gaps = 55/308 (17%)
Query: 69 VSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVCAAFA 126
++ G V+ +G V+A G +LG G + P ++ L Q V A +
Sbjct: 3024 IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPL---PHQLPVLRQYVVKKVAVHS 3080
Query: 127 SGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALA 186
G + A+ DG ++ WG+ + G+LG G T P VEAL +KI V+ G H+ A
Sbjct: 3081 GGKHALALTLDGKVFSWGEGEDGKLGHGNRTT-LDKPRLVEALRAKKIRDVACGSSHSAA 3139
Query: 187 QTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGM 246
+ G+L+ WG GR+G+ +T + KLV+
Sbjct: 3140 ISSQGELYTWGLGEYGRLGH------------------------GDNTTQLKPKLVTA-- 3173
Query: 247 EKEKYMPIIWEPFLVEGVEVVDIACGFD--HSLVLGRNGVLLSCGSNVYGQLGREKQDMG 304
+ G VV +ACG +L L +G + S G +G+LGR +
Sbjct: 3174 --------------LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGS 3219
Query: 305 MFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--P 362
P H + SG+G C + S A + +WG +LG G +V P
Sbjct: 3220 DTP-----HEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3274
Query: 363 LVVEGLEG 370
+ GL G
Sbjct: 3275 QPIGGLRG 3282
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 117/294 (39%), Gaps = 59/294 (20%)
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
++ WG N+ QLG G SR P E L + A+ DG L+ G
Sbjct: 4051 IYGWGHNHRGQLG-GLEGSRI--KTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4107
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG--HALAQTEDGKLFGWGYSADG 202
G+LG+G + AI P+ + +L + KV+ G H LA T +G+++ WG DG
Sbjct: 4108 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4166
Query: 203 RIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVE 262
++G+ + P KLV +
Sbjct: 4167 KLGHGNRMSYDRP------------------------KLVEH----------------LN 4186
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN----FHPVSIS 318
G+ V DIACG HS + +G +L+ G YG+LG + + P + + + I+
Sbjct: 4187 GMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIA 4246
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPD--NVPLVVEGLEG 370
G G + +C NV SWG +LGR G D +P +E L G
Sbjct: 4247 CGSGDAQTLCITDDDNVW-------SWGDGDYGKLGRGGSDGCKLPYKIESLAG 4293
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 28 AVVSFGDGSQGALGLPTSLTGVGGDA-YEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVW 86
AV S+GDG G LG S G D +E R+ G+ V + G SLA+T G VW
Sbjct: 3199 AVFSWGDGDFGKLGRGGS---EGSDTPHEIERLSGI--GVVQIECGAQFSLALTRAGEVW 3253
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG+ + +LG G + P+ + GL V + A+ D G ++ WG +
Sbjct: 3254 TWGKGDYYRLGHGGDQH---VRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN 3310
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALA 186
GQ G G P+ V L + +V+ G H++A
Sbjct: 3311 DHGQQGSGNTFVNK-KPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 122/309 (39%), Gaps = 55/309 (17%)
Query: 69 VSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--CAAFA 126
++ G AVT +G ++A G + +LG G +S W P + L V V A +
Sbjct: 4087 LAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDS---WAIPTLLGSLQHVFVKKVAVNS 4143
Query: 127 SGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALA 186
G A+ +G ++ WG+ + G+LG G ++ P VE L G + ++ G H+ A
Sbjct: 4144 GGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYD-RPKLVEHLNGMSVADIACGSAHSAA 4202
Query: 187 QTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGM 246
T G + WG GR G LG G
Sbjct: 4203 ITASGHVLTWG---KGRYGRLG-----------------------------------HGD 4224
Query: 247 EKEKYMPIIWEPFLVEGVEVVDIACGF--DHSLVLGRNGVLLSCGSNVYGQLGREKQDMG 304
+++ P + E L G +DIACG +L + + + S G YG+LGR D
Sbjct: 4225 SEDQLRPKLVEALL--GYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4282
Query: 305 MFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--P 362
P I +GLG C + S + + +WG +LG D+V P
Sbjct: 4283 KLPYKIES-----LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRP 4337
Query: 363 LVVEGLEGE 371
V L+G+
Sbjct: 4338 KKVAALQGK 4346
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
G +++ WG + RGQLG G + + P+ EAL+ + V+++ G A T DGKLF
Sbjct: 4046 GGASTIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLF 4104
Query: 195 GWGY 198
GY
Sbjct: 4105 ATGY 4108
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 28 AVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP-SDVTSVSAGHYHSLAVTNNGAVW 86
AV ++G G LG G P +V L + S++ G H +A +++G V+
Sbjct: 4314 AVYTWGKGDFHRLG-----HGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVY 4368
Query: 87 AWGRNNEVQLGRGAL 101
WG N+E QLG G +
Sbjct: 4369 TWGDNDEGQLGDGTV 4383
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 131/287 (45%), Gaps = 23/287 (8%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
HSL +T G +W+WGRN++ QLG G + PK +EGL + + AA + A+
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEA---PKLIEGLGEEVIVAAACGRNHTLAL 190
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
++G+++ +G++K GQLG G + P+ ++ G+ IVKV+ G ++ G L+
Sbjct: 191 TENGTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLY 249
Query: 195 GWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPI 254
+G G++G+ N D + + E + V+ +EK K +
Sbjct: 250 SFGCPEYGQLGH------------NSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQV 297
Query: 255 IWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHP 314
+ P +V D+ACG +H+LVL + S G YG+LG +Q M P +
Sbjct: 298 LPVPNVV----ARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD 353
Query: 315 VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV 361
G G + C + S G+ WG +S+ M P V
Sbjct: 354 F---PGRGATQIYCGYQCSFALSEMGGLFFWGVTNTSRESTMYPKAV 397
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 79/185 (42%), Gaps = 29/185 (15%)
Query: 56 PTRVPGLPSDVTSVSA-GHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P + GL +V +A G H+LA+T NG V+ +G N QLG+G +
Sbjct: 166 PKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYN 225
Query: 115 GLDQVNV-CAAFASGVVSSAIGDDGSLWVWGKSKRGQLGL---GKDITEA--------IV 162
G V V C A S +V G+L+ +G + GQLG GK I A ++
Sbjct: 226 GQPIVKVACGAEFSMIVDCK----GNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELI 281
Query: 163 PSRV----------EALAGEKIV--KVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKA 210
P RV + L +V V+ G H L ++F WG+ GR+G+ +
Sbjct: 282 PRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQK 341
Query: 211 LESSP 215
E P
Sbjct: 342 DEMVP 346
Score = 32.3 bits (72), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 78/216 (36%), Gaps = 50/216 (23%)
Query: 69 VSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAA--FA 126
V+ G H+L + + V++WG +LG + P+ V+ D A +
Sbjct: 308 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMV---PRLVKLFDFPGRGATQIYC 364
Query: 127 SGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALA 186
S A+ + G L+ WG + + + P V+ L G KI ++ G +
Sbjct: 365 GYQCSFALSEMGGLFFWGVTNTSR-------ESTMYPKAVQDLCGWKIRSLACGKSSIIV 417
Query: 187 QTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGM 246
+D + WG S G LG N +SS + QE+ +
Sbjct: 418 AADDSTI-SWGPSPT--FGELGYG-------DNKPKSSTTAQEVKT-------------- 453
Query: 247 EKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRN 282
++GV + G+ HSLV+ R
Sbjct: 454 --------------LDGVYSEQVVMGYSHSLVIARQ 475
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 128/250 (51%), Gaps = 23/250 (9%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAA 124
++ ++G +HSL + +N V++ G N+ QLG+ +S P+ ++ L+ ++V
Sbjct: 23 ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQST---ERPEPIQALNDLHVDLV 79
Query: 125 FASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA 184
S A+ G ++ WG GQLG+G+ + +P++++ALAG KI++VS G H+
Sbjct: 80 SCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHS 139
Query: 185 LAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSES---DQEISSSTIEKAQKL 241
LA +EDG +F WG +++G++G LGK S + + +S E Q + T A L
Sbjct: 140 LALSEDGHVFSWGRNSEGQLG-LGKNSRSQAIPQKV-KSLEGIPLAQVAAGGTHSFALSL 197
Query: 242 V------------SEGMEKEKYMPIIWEPFLV---EGVEVVDIACGFDHSLVLGRNGVLL 286
+ K I++P + + + V+ I+CG++H+ VL G +
Sbjct: 198 TGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVF 257
Query: 287 SCGSNVYGQL 296
+ G N GQL
Sbjct: 258 TFGGNSSGQL 267
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 103/242 (42%), Gaps = 62/242 (25%)
Query: 129 VVSSAIGDDGSLWVW--------GKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFG 180
++ +A G+ SL ++ G + GQLG +D + P ++AL + VS G
Sbjct: 24 LLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTE-RPEPIQALNDLHVDLVSCG 82
Query: 181 WGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQK 240
H++A GK+F WG ++G++G +G+ E S + + I KA
Sbjct: 83 KEHSVAVCHKGKVFAWGAGSEGQLG-IGEFKEISFMPTKI----------------KA-- 123
Query: 241 LVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREK 300
+ G++++ ++CG HSL L +G + S G N GQLG K
Sbjct: 124 --------------------LAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGK 163
Query: 301 QDMGM-FPVDIN----FHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGR 355
P + +++G HS A+ ++TG + G WG NRS QL
Sbjct: 164 NSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL------SLTGTSFG---WGSNRSGQLAL 214
Query: 356 MG 357
G
Sbjct: 215 SG 216
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI----NFHPVSIS 318
G+E++ A G HSL+L N + SCG N +GQLG+ + P I + H +S
Sbjct: 21 GIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVS 80
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
G HS+A+C + +WG QLG
Sbjct: 81 CGKEHSVAVCH---------KGKVFAWGAGSEGQLG 107
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 24 ASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVP-------GLPSDVTSVSAGHYHS 76
+ G + ++G G LG+ G + T P G+P + +SAG HS
Sbjct: 154 SKGGELFAWGQNLHGQLGV--------GRKFPSTTTPQIVEHLAGVP--LAQISAGEAHS 203
Query: 77 LAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGD 136
+A++ +G +++WG+N QLG G ES+ +DP +EGLD V G S+ +
Sbjct: 204 MALSMSGNIYSWGKNECGQLGLGHTESK---DDPSLIEGLDNQKVEFVACGGSHSALLTQ 260
Query: 137 DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTED-GKLFG 195
DG L+ +G K GQLG E + P V L G ++ +++ G H LA D GK+F
Sbjct: 261 DGLLFTFGAGKHGQLGHNSTQNE-LRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFS 319
Query: 196 WGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEG 245
+G DG++GN G + PL + SS + ++ S T EK +++ G
Sbjct: 320 FGSGKDGQLGNGGTRDQLMPLPVKV--SSSEELKLESHTSEKELIMIAGG 367
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 120/281 (42%), Gaps = 47/281 (16%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
+ ++ G YHSLA++ G ++AWG+N QLG G T P+ VE L V +
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTT--TPQIVEHLAGVPLAQIS 197
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHAL 185
A S A+ G+++ WGK++ GQLGLG ++ PS +E L +K+ V+ G H+
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKD-DPSLIEGLDNQKVEFVACGGSHSA 256
Query: 186 AQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEG 245
T+DG LF +G G++G+ E P LV+E
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPC------------------------LVAE- 291
Query: 246 MEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRN-GVLLSCGSNVYGQLGREKQDMG 304
+ G V IACG H+L + G + S GS GQLG
Sbjct: 292 ---------------LVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQ 336
Query: 305 MFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSW 345
+ P+ + VS S L E + GG + I+ W
Sbjct: 337 LMPLPVK---VSSSEELKLESHTSEKELIMIAGGNQSILLW 374
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 20/181 (11%)
Query: 165 RVEALAGEK-IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDR- 222
R E++ EK I++++ G H+LA ++ G+LF WG + G++G +G+ S+ ++
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLG-VGRKFPSTTTPQIVEHL 188
Query: 223 -----SSESDQEISSSTIEKAQKLVSEGMEKEKYMPI-----IWEPFLVEGVE---VVDI 269
+ S E S + + + S G + + + +P L+EG++ V +
Sbjct: 189 AGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFV 248
Query: 270 ACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN----FHPVSISSGLGHSL 325
ACG HS +L ++G+L + G+ +GQLG + P + + I+ G H+L
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTL 308
Query: 326 A 326
A
Sbjct: 309 A 309
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 260 LVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH----PV 315
+++ +++ I CG HSL L + G L + G N++GQLG ++ I H P+
Sbjct: 134 ILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPL 193
Query: 316 S-ISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQ--LGRMGPDNVPLVVEGLEGES 372
+ IS+G HS+A+ +++G I SWG N Q LG + P ++EGL+ +
Sbjct: 194 AQISAGEAHSMAL------SMSG---NIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQK 244
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 130/293 (44%), Gaps = 35/293 (11%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
HSL +T G +W+WGRN + QLG G + P+ +EGL + +A + A+
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEA---PRLIEGLSHEVIVSAACGRNHTLAL 217
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
+ GS++ +G++K GQLGLG P+++ G+ I K++ G ++ G L+
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMIMDCKGNLY 276
Query: 195 GWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPI 254
+G G++G+ N D + + E + V+ +EK K I
Sbjct: 277 SFGCPEYGQLGH------------NSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 324
Query: 255 IWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHP 314
+ P +V V D+ACG +H+LVL + S G YG+LG +Q M P +
Sbjct: 325 LPVPNVV----VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD 380
Query: 315 V------SISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV 361
I +G S A+ EV G+ WG +S+ M P V
Sbjct: 381 FPGRGASQIYAGYTCSFAVSEV---------GGLFFWGATNTSRESTMYPKAV 424
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 80/186 (43%), Gaps = 31/186 (16%)
Query: 56 PTRVPGLPSDV-TSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P + GL +V S + G H+LA+T G+V+A+G N QLG G T P +
Sbjct: 193 PRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLG----NQTDAVPSPAQ 248
Query: 115 GLDQVNVCAAFASGVVSSAIGD-DGSLWVWGKSKRGQLGL---GKDITEA--------IV 162
+ A G S I D G+L+ +G + GQLG GK I A +V
Sbjct: 249 IMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELV 308
Query: 163 PSRVEALAGEK-------------IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGK 209
P RV A+ EK + V+ G H L ++F WG+ GR+G+ +
Sbjct: 309 PRRV-AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQ 367
Query: 210 ALESSP 215
E P
Sbjct: 368 KDEMVP 373
Score = 35.0 bits (79), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 74/183 (40%), Gaps = 22/183 (12%)
Query: 10 NHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSV 69
NH VL S+ V S+G G G LG + + PG + +
Sbjct: 340 NHTLVLDSQ--------KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPG--RGASQI 389
Query: 70 SAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGV 129
AG+ S AV+ G ++ WG N SR + PK V+ L + + A G
Sbjct: 390 YAGYTCSFAVSEVGGLFFWGATN---------TSRESTMYPKAVQDLCGWRI-RSLACGK 439
Query: 130 VSSAIGDDGSLWVWGKSKR-GQLGLGKDITEAIVPSR-VEALAGEKIVKVSFGWGHALAQ 187
S + D S WG S G+LG G ++ ++ V+ L G +V+ G+ H+L
Sbjct: 440 SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 499
Query: 188 TED 190
D
Sbjct: 500 ARD 502
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 23/288 (7%)
Query: 28 AVVSFGDGSQGALGLPTS-LTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAV 85
+V DG GL T G + +P ++ L + V+ G HSLA+++ G +
Sbjct: 46 SVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQL 105
Query: 86 WAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGK 145
++WG ++ QLG E P+ ++ L+Q + A+ DG + WGK
Sbjct: 106 FSWGAGSDGQLGLMTTEDSVAV--PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 146 SKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
+ GQLGLGK+ P RV +L G + +V+ G H+ A + G +FGWG + G++G
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 206 NLGKALESSPLDSNIDRSSE----SDQEISSSTIEKAQKLVSEG-----------MEKEK 250
+ SP + R+ + S E ++ + K+ + + G M E
Sbjct: 224 LSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV 283
Query: 251 YMPIIWEPFLVEGVEVVDIACGFDHSLVL-GRNGVLLSCGSNVYGQLG 297
+ E + G EV IACG H+L +G++ + G GQLG
Sbjct: 284 NPRRVLE---LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 20/115 (17%)
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI----NFHPVSISSGL 321
V ++ACG +HS+ L +G + +CG N GQLG E++ G P I + H + ++ G
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHERE--GNKPEQIGALADQHIIHVACGE 93
Query: 322 GHSLAICEVRSSNVTGGARG-IVSWGWNRSSQLGRMGPDN---VPLVVEGLEGES 372
HSLA+ + RG + SWG QLG M ++ VP +++ L ++
Sbjct: 94 SHSLALSD----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQT 138
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 35/293 (11%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
HSL +T G +W+WGRN + QLG G + P+ +E L + A + A+
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEA---PRLIEALSHEAIVLAACGRNHTLAL 215
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
D GS++ +G++K GQLGLG P+++ G+ I K++ G ++ G L+
Sbjct: 216 TDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMLMDCKGNLY 274
Query: 195 GWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPI 254
+G G++G+ N D + + E + V+ +EK K I
Sbjct: 275 SFGCPEYGQLGH------------NSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQI 322
Query: 255 IWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFH- 313
+ P +V V D+ACG +H+LVL + S G YG+LG +Q M P +
Sbjct: 323 LPVPNVV----VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD 378
Query: 314 -----PVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV 361
I +G S A+ EV G+ WG +S+ M P V
Sbjct: 379 FPGRGATQIYAGYTCSFAVSEV---------GGLFFWGATNTSRESTMYPKAV 422
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 30/175 (17%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
+ + G H+LA+T+ G+V+A+G N QLG G T P + +
Sbjct: 202 IVLAACGRNHTLALTDTGSVFAFGENKMGQLGLG----NQTDAVPSPAQIMYNGQPITKM 257
Query: 126 ASGVVSSAIGD-DGSLWVWGKSKRGQLGL---GKDITEA--------IVPSRVEALAGEK 173
A G S + D G+L+ +G + GQLG GK I A +VP RV A+ EK
Sbjct: 258 ACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV-AIFIEK 316
Query: 174 -------------IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSP 215
+ V+ G H L ++F WG+ GR+G+ + E P
Sbjct: 317 TKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 371
Score = 36.2 bits (82), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 74/183 (40%), Gaps = 22/183 (12%)
Query: 10 NHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSV 69
NH VL S+ V S+G G G LG + + PG T +
Sbjct: 338 NHTLVLDSQ--------KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPG--RGATQI 387
Query: 70 SAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGV 129
AG+ S AV+ G ++ WG N SR + PK V+ L + + A G
Sbjct: 388 YAGYTCSFAVSEVGGLFFWGATN---------TSRESTMYPKAVQDLCGWRI-RSLACGK 437
Query: 130 VSSAIGDDGSLWVWGKSKR-GQLGLGKDITEAIVPSR-VEALAGEKIVKVSFGWGHALAQ 187
S + D S WG S G+LG G ++ ++ V+ L G +V+ G+ H+L
Sbjct: 438 SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 497
Query: 188 TED 190
D
Sbjct: 498 ARD 500
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 146/306 (47%), Gaps = 41/306 (13%)
Query: 66 VTSVSAGHY--HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLD-QVNVC 122
V SV++G HSL +T G +W+WGRN++ QLG G ++ + PK +E L +V V
Sbjct: 141 VRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKR---IDVPKLIESLKGEVFVH 197
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALA-GEKIVKVSFGW 181
AA + A+ ++GS++ +G++K GQLGLG + T+A VPS + L G+ I KV+ G
Sbjct: 198 AACGRNH-TLALTENGSVYAFGENKMGQLGLG-NKTDA-VPSPAQILYNGQPITKVACGA 254
Query: 182 GHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKL 241
++ G L+ +G G++G+ N D + + E +
Sbjct: 255 EFSMIMDCKGNLYSFGCPEYGQLGH------------NSDGKYIARAQRIEYDCELIARR 302
Query: 242 VSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQ 301
++ +EK K I+ P +V V DIACG +HSL+L + S G YG+LG +Q
Sbjct: 303 IAIFIEKTKDGQILPVPNVV----VRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQ 358
Query: 302 DMGMFPVDINFH------PVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGR 355
M P + I +G S A+ E+ G+ WG +S+
Sbjct: 359 RDEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEM---------GGLFFWGATNTSRDST 409
Query: 356 MGPDNV 361
M P V
Sbjct: 410 MYPKAV 415
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 43/245 (17%)
Query: 55 EPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRV 113
+P +V L + ++ +VS G H+LA+ + G V+AWG +++ QLG + S P+ +
Sbjct: 74 KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG--LVGSEECIRVPRNI 131
Query: 114 EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEK 173
+ L + + S A+ ++ WG++K GQLGLG D + P +++L G
Sbjct: 132 KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIP 191
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSS 233
++V+ G H+ T G +FGWG + G++G L+
Sbjct: 192 FMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG----------LND--------------- 226
Query: 234 TIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVY 293
E ++Y+P + + + ++V I CG DH+ L + G + + G+ Y
Sbjct: 227 -------------ENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 294 GQLGR 298
GQLG
Sbjct: 272 GQLGH 276
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 16/192 (8%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVP-GLPS----DVTSVSAGHYHSLAVTNNG 83
V ++G S G LGL VG + E RVP + S + V+ G+YHSLA++
Sbjct: 105 VYAWGLDSDGQLGL------VGSE--ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
V+ WG+N QLG G + T P+ ++ L + A G S + G+++ W
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQT--SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGR 203
G++K GQLGL D + VP+ +++L +KIV + G H A T++G +F +G G+
Sbjct: 215 GRNKFGQLGLN-DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 204 IGNLGKALESSP 215
+G+ + E +P
Sbjct: 274 LGHNSTSHEINP 285
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 112/275 (40%), Gaps = 57/275 (20%)
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
+ WG + QLG G ++ +P++ + V + + DDG+++ G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVL-EPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
+ GQLG K + P +V AL + IV VS G H LA + G+++ WG +DG++
Sbjct: 60 CNDLGQLGHEKSRKK---PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 205 GNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGV 264
G +G E + NI S+ +
Sbjct: 117 GLVGSE-ECIRVPRNIKSLSD--------------------------------------I 137
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG-----REKQDMGMFPVDINFHPVSISS 319
++V +ACG+ HSL L + + G N YGQLG +++ + + + +++
Sbjct: 138 QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAA 197
Query: 320 GLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
G HS + GA I WG N+ QLG
Sbjct: 198 GGAHSFVL-------TLSGA--IFGWGRNKFGQLG 223
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 139/313 (44%), Gaps = 43/313 (13%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V+S G S G LG+P P + L V S++AG H+LA T +G V+ W
Sbjct: 122 VLSCGSNSFGQLGVPHGPR----RCVIPQAIELLREKVVSIAAGLRHALAATASGTVFQW 177
Query: 89 GR---NNEVQLGRG-ALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
G ++ +L G L T +P V GL+ A S+++ D G L+VWG
Sbjct: 178 GTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWG 237
Query: 145 KSKRGQLGLGKDITEAIVPSRVEA--LAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADG 202
+K GQL ++P R+EA EKI V GW H +AQT GK+F WG +
Sbjct: 238 SNKHGQLA--SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRA--- 292
Query: 203 RIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVE 262
G LG+ +E+ ES+++ S QK + P L
Sbjct: 293 DYGQLGRTVETR-------EGWESEKQDPSLPGSGPQKGTPSCL-----------PCLTG 334
Query: 263 GVEVVDIACGFDHSL-VLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN----FHPVSI 317
E I+CG +H+L V+G GV S G N +G G + P + F + +
Sbjct: 335 ATE---ISCGSEHNLAVIG--GVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHV 389
Query: 318 SSGLGHSLAICEV 330
G GHSLA+C++
Sbjct: 390 GCGAGHSLALCQL 402
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 135/315 (42%), Gaps = 54/315 (17%)
Query: 74 YHSLAVTNNGAVWAWGRNNEVQLGRGALE---SRATWNDPKRVEGLDQVNVCAAFASGVV 130
+ S AV A++AWG N+ QLG G E S +D + + ++ G
Sbjct: 6 HSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRIT-----GGGGH 60
Query: 131 SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTED 190
S+ + D+GSL+V G +K GQLGLG E + + ++L G I +V+ GW + TE+
Sbjct: 61 SAVVTDEGSLFVCGLNKDGQLGLGH-TEEVLYFTPCKSLLGCAIQQVACGWDFTIILTEN 119
Query: 191 GKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQE----------------ISSST 234
G++ G ++ G++G + P I ++ E +E S +
Sbjct: 120 GQVLSCGSNSFGQLG-----VPHGPRRCVIPQAIELLREKVVSIAAGLRHALAATASGTV 174
Query: 235 IEKAQKLVSEG--MEKEKYMPIIW---EPFLVEGVEVVDIAC---GFDHSLVLGRNGVLL 286
+ L S G + + +P+ EP V G+E C G DHS L G L
Sbjct: 175 FQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELY 234
Query: 287 SCGSNVYGQLGREKQDMGMFPVDI------NFHPVSISSGLGHSLAICEVRSSNVTGGAR 340
GSN +GQL + + + P I N ++ SG H +A VTG
Sbjct: 235 VWGSNKHGQLASQAAFL-LLPQRIEARCFQNEKIAAVWSGWTHLVA------QTVTG--- 284
Query: 341 GIVSWGWNRSSQLGR 355
+ +WG QLGR
Sbjct: 285 KVFTWGRADYGQLGR 299
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 58/246 (23%)
Query: 131 SSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTED 190
S A+ +L+ WG + GQLGLG + I +++ G GH+ T++
Sbjct: 8 SEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDE 67
Query: 191 GKLFGWGYSADGRIG--NLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEK 248
G LF G + DG++G + + L +P S +
Sbjct: 68 GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLL---------------------------- 99
Query: 249 EKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG-REKQDMGMFP 307
G + +ACG+D +++L NG +LSCGSN +GQLG + P
Sbjct: 100 --------------GCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIP 145
Query: 308 VDINF---HPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGP-DNVPL 363
I VSI++GL H+LA + +G + WG +S R+ P +PL
Sbjct: 146 QAIELLREKVVSIAAGLRHALA------ATASG---TVFQWGTGLASSGRRLCPGQTLPL 196
Query: 364 VVEGLE 369
+ E
Sbjct: 197 FLTAKE 202
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 130/334 (38%), Gaps = 64/334 (19%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
+ ++ G HS VT+ G+++ G N + QLG G E + K + G V +
Sbjct: 51 IKRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGW 110
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHAL 185
++ + ++G + G + GQLG+ ++P +E L EK+V ++ G HAL
Sbjct: 111 DFTII---LTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLR-EKVVSIAAGLRHAL 166
Query: 186 AQTEDGKLFGWG--YSADGRIGNLGKALESSPLDSNIDRSS-----ESDQEIS------- 231
A T G +F WG ++ GR G+ L PL S E+ Q +
Sbjct: 167 AATASGTVFQWGTGLASSGRRLCPGQTL---PLFLTAKEPSTVTGLENSQAVCVLAGSDH 223
Query: 232 SSTIEKAQKLVSEGMEKEK---------YMPIIWEPFLVEGVEVVDIACGFDHSLVLGRN 282
S+++ A +L G K +P E + ++ + G+ H +
Sbjct: 224 SASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVT 283
Query: 283 GVLLSCGSNVYGQLGR----------EKQDMGM------------FPVDINFHPVSISSG 320
G + + G YGQLGR EKQD + P IS G
Sbjct: 284 GKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTG--ATEISCG 341
Query: 321 LGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
H+LA V GG SWGWN G
Sbjct: 342 SEHNLA--------VIGGV--CHSWGWNEHGMCG 365
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 91.7 bits (226), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 43/245 (17%)
Query: 55 EPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRV 113
+P +V L + ++ +V+ G H+LA+ + G V+AWG +++ QLG S P+ +
Sbjct: 74 KPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPRNI 131
Query: 114 EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEK 173
+ L + + S A+ ++ WG++K GQLGLG D + P +++L G
Sbjct: 132 KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIP 191
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSS 233
++V+ G H+ T G +FGWG + G++G L+
Sbjct: 192 FMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG----------LND--------------- 226
Query: 234 TIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVY 293
E ++Y+P + + + ++V I CG DH+ L + G + + G+ Y
Sbjct: 227 -------------ENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 294 GQLGR 298
GQLG
Sbjct: 272 GQLGH 276
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 8/188 (4%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
V ++G S G LGL S + P + L + V+ G+YHSLA++ V+
Sbjct: 105 VYAWGLDSDGQLGLQGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG+N QLG G + T P+ ++ L + A G S + G+++ WG++K
Sbjct: 161 WGQNKYGQLGLGIDCQKQT--SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNL 207
GQLGL D + VP+ +++L +KIV + G H A T++G +F +G G++G+
Sbjct: 219 FGQLGLN-DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 208 GKALESSP 215
+ E +P
Sbjct: 278 STSHEINP 285
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 57/273 (20%)
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKS 146
WG + QLG G ++ +P+R + V + + DDG+++ G +
Sbjct: 3 CWGNASYGQLGLGGIDEEIVL-EPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
GQLG K + P +V AL + IV V+ G H LA + G+++ WG +DG++G
Sbjct: 62 DLGQLGHEKSRKK---PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 207 LGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEV 266
G E + NI S+ +++
Sbjct: 119 QGSE-ECIRVPRNIKSLSD--------------------------------------IQI 139
Query: 267 VDIACGFDHSLVLGRNGVLLSCGSNVYGQLG-----REKQDMGMFPVDINFHPVSISSGL 321
V +ACG+ HSL L + + G N YGQLG +++ + + + +++G
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 322 GHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
HS + GA I WG N+ QLG
Sbjct: 200 AHSFVL-------TLSGA--IFGWGRNKFGQLG 223
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 43/245 (17%)
Query: 55 EPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRV 113
+P +V L + ++ +VS G H+LA+ + G V+AWG +++ QLG S P+ +
Sbjct: 74 KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPRNI 131
Query: 114 EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEK 173
+ L + + S A+ ++ WG++K GQLGLG + + P +++L G
Sbjct: 132 KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIP 191
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSS 233
++V+ G H+ T G +FGWG + G++G L+
Sbjct: 192 FMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG----------LND--------------- 226
Query: 234 TIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVY 293
E ++Y+P + + + ++V I CG DH+ L + G + + G+ Y
Sbjct: 227 -------------ENDRYVPNLLKS--LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 294 GQLGR 298
GQLG
Sbjct: 272 GQLGH 276
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 8/188 (4%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWA 87
V ++G S G LGL S + P + L + V+ G+YHSLA++ V+
Sbjct: 105 VYAWGLDSDGQLGLQGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG+N QLG G + T P+ ++ L + A G S + G+++ WG++K
Sbjct: 161 WGQNKYGQLGLGIECQKQT--SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218
Query: 148 RGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNL 207
GQLGL D + VP+ +++L +KIV + G H A T++G +F +G G++G+
Sbjct: 219 FGQLGLN-DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 208 GKALESSP 215
+ E +P
Sbjct: 278 STSHEINP 285
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 111/275 (40%), Gaps = 57/275 (20%)
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
+ WG + QLG G ++ +P++ + V + + DDG+++ G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVL-EPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
+ GQLG K + P +V AL + IV VS G H LA + G+++ WG +DG++
Sbjct: 60 CNDLGQLGHEKSRKK---PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 205 GNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGV 264
G G E + NI S+ +
Sbjct: 117 GLQGSE-ECIRVPRNIKSLSD--------------------------------------I 137
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG-----REKQDMGMFPVDINFHPVSISS 319
++V +ACG+ HSL L + + G N YGQLG +++ + + + +++
Sbjct: 138 QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAA 197
Query: 320 GLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
G HS + GA I WG N+ QLG
Sbjct: 198 GGAHSFVL-------TLSGA--IFGWGRNKFGQLG 223
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 134/313 (42%), Gaps = 43/313 (13%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V+S G S G LG+P P + V ++AG H++A T +G V+ W
Sbjct: 122 VLSCGSNSFGQLGVPHGPR----RCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQW 177
Query: 89 GRNNEVQLGRGALESRA-----TWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
G GR + T +P RV GL+ A S+++ D G ++VW
Sbjct: 178 G-TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVW 236
Query: 144 GKSKRGQLGLGKDITEAIVPSRVEA--LAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD 201
G +K GQL + VP ++EA EK+ + GW H +AQTE GK+F WG AD
Sbjct: 237 GSNKHGQLA--NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWG-RAD 293
Query: 202 GRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLV 261
G LG+ LE+ +EK + MP P +
Sbjct: 294 --YGQLGRKLET----------------YEGWKLEKQDSFLP-CSRPPNSMPS--SPHCL 332
Query: 262 EGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQL--GREKQDMGMFPVD--INFHPVSI 317
G +++CG +H+L + GV S G N +G G E PV ++ + +
Sbjct: 333 TG--ATEVSCGSEHNLAI-IGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLV 389
Query: 318 SSGLGHSLAICEV 330
G GHSLA+C++
Sbjct: 390 GCGAGHSLALCQL 402
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 140/352 (39%), Gaps = 64/352 (18%)
Query: 63 PSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC 122
P V ++ G HS VT+ G ++ G N + QLG G E + K + G V
Sbjct: 48 PRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVA 107
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
+ ++ + ++G + G + GQLG+ +VP +E L EK+V ++ G
Sbjct: 108 CGWDFTIM---LTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIE-LHKEKVVCIAAGLR 163
Query: 183 HALAQTEDGKLFGW--GYSADGRIGNLGKALESSPLDSNIDRSS-----ESDQEIS---- 231
HA+A T G +F W G ++ GR G+ L PL S E+ + +
Sbjct: 164 HAVAATASGIVFQWGTGLASCGRRLCPGQTL---PLFFTAKEPSRVTGLENSKAMCVLAG 220
Query: 232 ---SSTIEKAQKLVSEGMEKE-------KYMPIIW--EPFLVEGVEVVDIACGFDHSLVL 279
S+++ A ++ G K ++P+ E + +V I G+ H +
Sbjct: 221 SDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQ 280
Query: 280 GRNGVLLSCGSNVYGQLGR----------EKQDMGMFPVD--INFHPVS---------IS 318
G + + G YGQLGR EKQD P N P S +S
Sbjct: 281 TETGKMFTWGRADYGQLGRKLETYEGWKLEKQD-SFLPCSRPPNSMPSSPHCLTGATEVS 339
Query: 319 SGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGL 368
G H+LAI GG SWGWN G NV P V+ L
Sbjct: 340 CGSEHNLAI--------IGGV--CYSWGWNEHGMCGDGTEANVWAPKPVQAL 381
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 58/228 (25%)
Query: 149 GQLGLGKDITEAIVPSRVEALAGEKIVK-VSFGWGHALAQTEDGKLFGWGYSADGRIGNL 207
GQLGLG + ++P ++ + V+ ++ G GH+ T+ G LF G + DG++G L
Sbjct: 26 GQLGLGHK-EDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLG-L 83
Query: 208 GKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVV 267
G ++I T K+ + G +
Sbjct: 84 GHT-----------------EDIPYFTPCKS----------------------LFGCPIQ 104
Query: 268 DIACGFDHSLVLGRNGVLLSCGSNVYGQLG-REKQDMGMFPVDINFHP---VSISSGLGH 323
+ACG+D +++L NG +LSCGSN +GQLG + P I H V I++GL H
Sbjct: 105 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRH 164
Query: 324 SLAICEVRSSNVTGGARGIV-SWGWNRSSQLGRMGP-DNVPLVVEGLE 369
++A A GIV WG +S R+ P +PL E
Sbjct: 165 AVA----------ATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKE 202
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 92/180 (51%), Gaps = 5/180 (2%)
Query: 62 LPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV 121
L V V+ G +HS+A+ +G ++AWG NN Q+G G+ ++ T P++V
Sbjct: 126 LIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPT---PRKVTNCLHTKR 182
Query: 122 CAAFASGVVSS-AIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFG 180
A G SS A+ D G ++ WG + GQLGLG + + + P RV AL G + ++ G
Sbjct: 183 VVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAALHGMCVNQIVCG 241
Query: 181 WGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQK 240
+ H LA T++G L+ WG + G++G K SP +++ + ST A K
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAK 301
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 116/293 (39%), Gaps = 67/293 (22%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP-SDVTSVSAGH-YHSLAVTNNGAVW 86
V FG LG TG P ++ L + S+S G H L T +G V+
Sbjct: 43 VFVFGLNYSNCLG-----TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVY 97
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVV---------SSAIGDD 137
AWG N QLG G +G+ V VC V S A+ D
Sbjct: 98 AWGHNGYSQLGNGTTN-----------QGIAPVQVCTNLLIKQVIEVACGSHHSMALAAD 146
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G L+ WG + GQ+G G + L +++V ++ G ++A + G+++GWG
Sbjct: 147 GELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWG 206
Query: 198 YSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWE 257
Y+ +G++G + +P+ +++
Sbjct: 207 YNGNGQLGLGNNGNQLTPV------------RVAA------------------------- 229
Query: 258 PFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
+ G+ V I CG+ H+L L G+L + G+N YGQLG ++ + P I
Sbjct: 230 ---LHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI 279
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 106/246 (43%), Gaps = 59/246 (23%)
Query: 134 IGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG-HALAQTEDGK 192
+ D+ ++V+G + LG G D +VP ++EAL G+KI +S+G G H L TEDG
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTG-DNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGV 95
Query: 193 LFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYM 252
++ WG++ ++GN G +
Sbjct: 96 VYAWGHNGYSQLGN--------------------------------------GTTNQGIA 117
Query: 253 PI-IWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN 311
P+ + L++ +V+++ACG HS+ L +G L + G N GQ+G P +
Sbjct: 118 PVQVCTNLLIK--QVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVT 175
Query: 312 --FHP---VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQ--LGRMGPDNVPLV 364
H V+I+ G S+A+ + S V G WG+N + Q LG G P+
Sbjct: 176 NCLHTKRVVNIACGQTSSMAV--LDSGEVYG-------WGYNGNGQLGLGNNGNQLTPVR 226
Query: 365 VEGLEG 370
V L G
Sbjct: 227 VAALHG 232
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 5/162 (3%)
Query: 62 LPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV 121
L V V+ G +HS+A+ +G V+AWG NN Q+G G+ ++ T P++V +
Sbjct: 126 LIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPT---PRKVTNCLHIKR 182
Query: 122 CAAFASGVVSS-AIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFG 180
A G SS A+ D+G ++ WG + GQLGLG + + + P RV AL + ++ G
Sbjct: 183 VVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAALHSVCVNQIVCG 241
Query: 181 WGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDR 222
+ H LA T++G L+ WG + G++G K SP +++
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK 283
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 117/293 (39%), Gaps = 67/293 (22%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP-SDVTSVSAGH-YHSLAVTNNGAVW 86
V FG LG TG P ++ GL + S+S G H L T +G V+
Sbjct: 43 VFVFGLNYSNCLG-----TGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVY 97
Query: 87 AWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVV---------SSAIGDD 137
AWG N QLG G +G+ V VC V S A+ D
Sbjct: 98 AWGHNGYSQLGNGTTN-----------QGIAPVQVCTNLLIKQVVEVACGSHHSMALAAD 146
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG + GQ+G G + L +++V ++ G ++A ++G+++GWG
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWG 206
Query: 198 YSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWE 257
Y+ +G++G + +P+ +++
Sbjct: 207 YNGNGQLGLGNNGNQLTPV------------RVAA------------------------- 229
Query: 258 PFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
+ V V I CG+ H+L L G+L + G+N YGQLG ++ + P I
Sbjct: 230 ---LHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHI 279
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 35/250 (14%)
Query: 134 IGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG-HALAQTEDGK 192
+ D+ ++V+G + LG G D +VP ++E L G+KI +S+G G H L TEDG
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTG-DNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGV 95
Query: 193 LFGWGYSADGRIGN----------------LGKALESSPLDSNIDRSSESDQEISSSTIE 236
++ WG++ ++GN L K + S+ + +D E+ +
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 237 KAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQL 296
++ S + + ++ VV IACG S+ + NG + G N GQL
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIK--RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQL 213
Query: 297 GREKQDMGMFPVDI-NFHPVSIS---SGLGHSLAICEVRSSNVTGGARGIV-SWGWNRSS 351
G + PV + H V ++ G H+LA+ + G++ +WG N
Sbjct: 214 GLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD----------EGLLYAWGANTYG 263
Query: 352 QLGRMGPDNV 361
QLG +N+
Sbjct: 264 QLGTGNKNNL 273
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 16/94 (17%)
Query: 275 HSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF-----HPVSISSGLGHSLAICE 329
H L+ +GV+ + G N Y QLG + G+ PV + V ++ G HS+A+
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL-- 143
Query: 330 VRSSNVTGGARG-IVSWGWNRSSQLGRMGPDNVP 362
A G + +WG+N Q+G N P
Sbjct: 144 --------AADGEVFAWGYNNCGQVGSGSTANQP 169
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 124/267 (46%), Gaps = 51/267 (19%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVPGL-PSDVTSVSAGHYHSLAVTNNGAVWAWGR 90
FG + G LGL G +PT V L P V + G H+L T G V+A G
Sbjct: 59 FGSNNWGQLGL-----GSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 91 NNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQ 150
NNE QLG G E R T++ ++ +A ++ S+A+ +DG L++WG + GQ
Sbjct: 114 NNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSN--TSAALTEDGRLFMWGDNSEGQ 171
Query: 151 LGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKA 210
+GL K+++ VP +V G+ + +S G+ H+ T DG+L+ +G +G++G +
Sbjct: 172 IGL-KNVSNVCVPQQV--TIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQL 228
Query: 211 LESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIA 270
L + + +LVSE EK V+ +A
Sbjct: 229 LGN----------------------HRTPQLVSEIPEK-----------------VIQVA 249
Query: 271 CGFDHSLVLGRNGVLLSCGSNVYGQLG 297
CG +H++VL N V + G +GQLG
Sbjct: 250 CGGEHTVVLTENAV-YTFGLGQFGQLG 275
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 9/140 (6%)
Query: 69 VSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL--DQVNVCAAFA 126
+S G HS VT N ++ +G NN QLG G S++ + P V+ L ++V + A
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTCVKALKPEKVKLAACGR 96
Query: 127 SGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGE-KIVKVSFGWGHAL 185
+ + S G G+++ G + GQLGLG D E + E KI ++S G +
Sbjct: 97 NHTLVSTEG--GNVYATGGNNEGQLGLG-DTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 186 AQTEDGKLFGWGYSADGRIG 205
A TEDG+LF WG +++G+IG
Sbjct: 154 ALTEDGRLFMWGDNSEGQIG 173
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 18/184 (9%)
Query: 33 GDGSQGALGLPTSLTGVGGDAYEPTRVP-GLPSDVTSVSAGHYHSLAVTNNGAVWAWGRN 91
GD S+G +GL + P +V G P V+ +S G+YHS VT +G ++ +G
Sbjct: 165 GDNSEGQIGLKNV-----SNVCVPQQVTIGKP--VSWISCGYYHSAFVTTDGELYVFG-- 215
Query: 92 NEVQLGRGALESRATWND--PKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRG 149
E + G+ L ++ N P+ V + + + A G + + + +++ +G + G
Sbjct: 216 -EPENGKLGLPNQLLGNHRTPQLVSEIPEKVI--QVACGGEHTVVLTENAVYTFGLGQFG 272
Query: 150 QLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGK 209
QLGLG + E P +E + + I +S G H T+ G ++ +G DGR G LG
Sbjct: 273 QLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG---DGRHGKLGL 329
Query: 210 ALES 213
LE+
Sbjct: 330 GLEN 333
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 154/322 (47%), Gaps = 36/322 (11%)
Query: 27 TAVVS-------FGDGSQGALGLPTSLTGVGGDAYEPTRVPGL-PSDVTSVSAGHYHSLA 78
TA+V+ FG + G LGL G +PT + L P V + G H+L
Sbjct: 47 TAIVTGNNKLYMFGSNNWGQLGL-----GSKAAIIKPTCIKALKPEKVKLAACGRNHTLV 101
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG 138
T+ G V+A G NNE QLG G + R T++ D + +A A+ S+A+ +DG
Sbjct: 102 STDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGAN--TSAALTEDG 159
Query: 139 SLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGY 198
L++WG + GQ+GL +D + +P V G+ I +S G+ H+ T DG+L+ +G
Sbjct: 160 KLFMWGDNSEGQIGL-EDKSNVCIPHEV--TVGKPISWISCGYYHSAFVTMDGELYTFGE 216
Query: 199 SADGRIGNLGKALESSPLDSNIDRSSESDQEISS---STIEKAQKLV-SEGMEKE----- 249
+G++G + L + + E +++ T+ +K+V + G+ +
Sbjct: 217 PENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKVVYAFGLGQFGQLGL 276
Query: 250 -KYMPIIWEPFLVEGV---EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM 305
++ EP ++E + ++ I+CG +H+ ++ G+L + G +G+LG +GM
Sbjct: 277 GTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLG-----LGM 331
Query: 306 FPVDINFHPVSISSGLGHSLAI 327
F P S+ L ++ +
Sbjct: 332 ENFTNQFFPTLCSNFLRFAVQL 353
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 96/231 (41%), Gaps = 49/231 (21%)
Query: 69 VSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL--DQVNVCAAFA 126
+S G H+ VT N ++ +G NN QLG G S+A P ++ L ++V + A
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG---SKAAIIKPTCIKALKPEKVKLAACGR 96
Query: 127 SGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALA 186
+ + S D G ++ G + GQLGLG V + I ++S G + A
Sbjct: 97 NHTLVST--DTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAA 154
Query: 187 QTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGM 246
TEDGKLF WG +++G+IG K+ P + + +
Sbjct: 155 LTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGK------------------------ 190
Query: 247 EKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
PI W I+CG+ HS + +G L + G G+LG
Sbjct: 191 ------PISW------------ISCGYYHSAFVTMDGELYTFGEPENGKLG 223
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 7/158 (4%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
+ +FG+ G LGLP L + P RV G+P V V+ G H++ +T V+A+
Sbjct: 211 LYTFGEPENGKLGLPNELL---MNHRSPQRVLGIPERVIQVACGGGHTVVLTEK-VVYAF 266
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKR 148
G QLG G + +PK +E + +C ++ + + G L+ +G +
Sbjct: 267 GLGQFGQLGLGTFLFETS--EPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRH 324
Query: 149 GQLGLG-KDITEAIVPSRVEALAGEKIVKVSFGWGHAL 185
G+LGLG ++ T P+ + ++ G H L
Sbjct: 325 GKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHML 362
Score = 32.0 bits (71), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Query: 269 IACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN-FHPVSISSGLGHSLAI 327
++CG +H+ ++ N L GSN +GQLG + + P I P + LA
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKV------KLAA 93
Query: 328 CEVRSSNVTGGARGIVSWGWNRSSQLG 354
C + V+ G+ + G N QLG
Sbjct: 94 CGRNHTLVSTDTGGVYAAGGNNEGQLG 120
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 146/361 (40%), Gaps = 85/361 (23%)
Query: 41 GLPTSLTGV---GGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLG 97
+P L+ V GG P R+P L ++V V+AG VT +G + W LG
Sbjct: 306 AIPPPLSSVYAWGGGLGTPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW---EAPPLG 362
Query: 98 RG-------ALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQ 150
G A+E + +EG V + ++ + D G + +G G
Sbjct: 363 AGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGC 422
Query: 151 LGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKA 210
LG G +T+ P+ VEAL G ++V+V+ G H LA + + +LF WG GR+G +
Sbjct: 423 LGHG-SLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRE 481
Query: 211 LESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIA 270
S P Q++ ++AQ++V
Sbjct: 482 SHSCP------------QQVPMPPGQEAQRVV---------------------------- 501
Query: 271 CGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPV-----------------DINFH 313
CG D S++L G L+CGSN + +LG + +G PV ++
Sbjct: 502 CGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQE 561
Query: 314 P-VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG---RMGPDNVPLVVEGLE 369
P +SI G HS A+ +G ++G N+ QLG R G P V+GLE
Sbjct: 562 PLLSIDLGTAHSAAV------TASGDC---YTFGSNQHGQLGTNTRRG-SRAPCKVQGLE 611
Query: 370 G 370
G
Sbjct: 612 G 612
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 131/321 (40%), Gaps = 65/321 (20%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP-SDVTSVSAGHYHSLAVTNNGAVWA 87
+++FG GS G LG G D +PT V L ++ V+ G H LA++ ++A
Sbjct: 412 IMTFGSGSNGCLG-----HGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFA 466
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WGR + +LG G ES + G + V S ++ + G G ++
Sbjct: 467 WGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTV---PGQALACGSNR 523
Query: 148 RGQLGLGK-DITEAIVPSRV--EALA----------GEKIVKVSFGWGHALAQTEDGKLF 194
+LGL + E VP + EAL+ E ++ + G H+ A T G +
Sbjct: 524 FNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCY 583
Query: 195 GWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPI 254
+G + G++G +N R S + ++
Sbjct: 584 TFGSNQHGQLG------------TNTRRGSRAPCKVQG---------------------- 609
Query: 255 IWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM-FPVDIN-F 312
+EG+++ +ACG ++ +G + S G G+LGR +D G+ PV ++
Sbjct: 610 ------LEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQLDET 663
Query: 313 HPVSISS-GLGHSLAICEVRS 332
HP +++S H + VRS
Sbjct: 664 HPYTVTSVSCCHGNTLLAVRS 684
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 127/281 (45%), Gaps = 62/281 (22%)
Query: 27 TAVVS-------FGDGSQGALGLPTSLTGVGGDAYEPTRVPGL-PSDVTSVSAGHYHSLA 78
TAVV+ FG + G LGL G +PT V L P V + G H+L
Sbjct: 47 TAVVTGNNKLYMFGSNNWGQLGL-----GSKSTVSKPTCVKALKPEKVKFAACGRNHTLV 101
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG 138
T G V+A G NNE QLG G E R+T++ ++ +A ++ S+A+ +DG
Sbjct: 102 STEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSN--TSAALTEDG 159
Query: 139 SLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGY 198
L++WG + GQ+GL +++T VP +V G+ I +S G+ H+ T +G+L+ +G
Sbjct: 160 ELFMWGDNSEGQIGL-ENVTNVCVPQQV--TVGKPISWISCGYYHSAFVTTEGQLYTFGE 216
Query: 199 SADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEP 258
G++G L L LV+ M P
Sbjct: 217 PECGKLG-LPNQL-----------------------------LVNHRM-----------P 235
Query: 259 FLVEGV--EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
V G+ +VV +ACG H++VL V + G +GQLG
Sbjct: 236 QPVPGIPGKVVQVACGGGHTVVLTEKAV-YTFGLGQFGQLG 275
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 18/185 (9%)
Query: 33 GDGSQGALGLPTSLTGVGGDAYEPTRVP-GLPSDVTSVSAGHYHSLAVTNNGAVWAWGRN 91
GD S+G +GL ++T V P +V G P ++ +S G+YHS VT G ++ +G
Sbjct: 165 GDNSEGQIGL-ENVTNVCV----PQQVTVGKP--ISWISCGYYHSAFVTTEGQLYTFG-- 215
Query: 92 NEVQLGRGALESRATWND--PKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRG 149
E + G+ L ++ N P+ V G+ V A G + + + +++ +G + G
Sbjct: 216 -EPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGG--HTVVLTEKAVYTFGLGQFG 272
Query: 150 QLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGK 209
QLGLG + E VP +E + +KI ++ G H T+ G ++ +G DGR G LG
Sbjct: 273 QLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFG---DGRHGKLGL 329
Query: 210 ALESS 214
LE+S
Sbjct: 330 GLENS 334
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 125/296 (42%), Gaps = 66/296 (22%)
Query: 67 TSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL--DQVNVCAA 124
T +S G H+ VT N ++ +G NN QLG G S++T + P V+ L ++V A
Sbjct: 38 TFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLG---SKSTVSKPTCVKALKPEKVKFAAC 94
Query: 125 FASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGE-KIVKVSFGWGH 183
+ + S G G ++ G + GQLGLG D E + + KI ++S G
Sbjct: 95 GRNHTLVSTEG--GKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSAGSNT 151
Query: 184 ALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVS 243
+ A TEDG+LF WG +++G+IG + + T + V+
Sbjct: 152 SAALTEDGELFMWGDNSEGQIG------------------------LENVTNVCVPQQVT 187
Query: 244 EGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDM 303
G PI W I+CG+ HS + G L + G G+LG Q +
Sbjct: 188 VG------KPISW------------ISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLL 229
Query: 304 --GMFPVDINFHP---VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
P + P V ++ G GH++ + E + + ++G + QLG
Sbjct: 230 VNHRMPQPVPGIPGKVVQVACGGGHTVVLTE----------KAVYTFGLGQFGQLG 275
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 149/353 (42%), Gaps = 69/353 (19%)
Query: 41 GLPTSLTGV---GGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLG 97
+P L+ V GG P R+P L ++V V+AG VT +G + W LG
Sbjct: 312 AIPPPLSSVYAWGGGLSSPLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW---EAPPLG 368
Query: 98 RG-------ALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQ 150
G A+E + +EG V + + ++ + D G + +G G
Sbjct: 369 AGGGTLLPGAVELPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGC 428
Query: 151 LGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKA 210
LG G ++T+ P+ VEAL G ++V+V+ G H LA + DG+LF WG GR+G +
Sbjct: 429 LGHG-NLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRE 487
Query: 211 LESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIA 270
+ P Q++ + ++AQ++V
Sbjct: 488 SHNCP------------QQVPVAPGQEAQRVV---------------------------- 507
Query: 271 CGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVD-------INFHPVSISSGLGH 323
CG D S++L G +L+CGSN + +LG + + PV ++F P+ S+ L
Sbjct: 508 CGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLG-SAPLDQ 566
Query: 324 SLAIC----EVRSSNVTGGARGIVSWGWNRSSQLGRMGP--DNVPLVVEGLEG 370
+C S+ +T ++G N+ QLG P V+GLEG
Sbjct: 567 EPLLCVDLGTAHSAAITASG-DCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEG 618
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 137/325 (42%), Gaps = 73/325 (22%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP-SDVTSVSAGHYHSLAVTNNGAVWA 87
+++FG GS G LG G D +PT V L ++ V+ G H LA++ +G ++A
Sbjct: 418 IMTFGSGSNGCLG-----HGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELFA 472
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLD----QVNVCAAFASGVVSSAIGDDGSLWVW 143
WGR + + L +R + N P++V Q VC +S +++S G +
Sbjct: 473 WGRGDGGR---LGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSP----GRVLAC 525
Query: 144 GKSKRGQLGLG-----------KDITEAI--VPSRVEALAGEKIVKVSFGWGHALAQTED 190
G ++ +LGL + + EA+ P L E ++ V G H+ A T
Sbjct: 526 GSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITAS 585
Query: 191 GKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEK 250
G + +G + G++G + + +P + Q L
Sbjct: 586 GDCYTFGSNQHGQLGTSSRRVSRAPC--------------------RVQGL--------- 616
Query: 251 YMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM-FPVD 309
EG+++V +ACG ++ +G G + S G G+LGR +D G+ PV
Sbjct: 617 -----------EGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQ 665
Query: 310 IN-FHPVSISS-GLGHSLAICEVRS 332
++ HP ++S H + VRS
Sbjct: 666 LDETHPYMVTSVSCCHGNTLLAVRS 690
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 135/312 (43%), Gaps = 61/312 (19%)
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFAS 127
+V++G H LA+++ G V++WG + +LG G +R+ + P+ +E L + V A
Sbjct: 4043 AVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG---NRSPCDRPRVIESLRGIEVVDVAAG 4099
Query: 128 GVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--L 185
G S+ + G L+ WGK + G+LG D + + P VEAL G ++V ++ G G A L
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLG-HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 4158
Query: 186 AQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEG 245
T+D ++ WG DG G LG+ S + K+ S
Sbjct: 4159 CLTDDDTVWSWG---DGDYGKLGRG--------------------GSDGCKVPMKIDS-- 4193
Query: 246 MEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM 305
+ G+ VV + CG S+ L ++G + + G Y +LG D
Sbjct: 4194 ---------------LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238
Query: 306 FPVDIN----FHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV 361
P + ++I++G H +C V +WG N QLG + +
Sbjct: 4239 RPRQVQGLQGKKVIAIATGSLH--CVCCTEDGEV-------YTWGDNDEGQLGDGTTNAI 4289
Query: 362 --PLVVEGLEGE 371
P +V L+G+
Sbjct: 4290 QRPRLVAALQGK 4301
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
+LA+T+ G V++WG + +LGRG E N P+ +E L+ VC S A+
Sbjct: 3164 QTLALTDEGLVFSWGDGDFGKLGRGGSEG---CNIPQNIERLNGQGVCQIECGAQFSLAL 3220
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
G +W WGK +LG G D+ P VE L G+KIV V+ G H LA T+ G+++
Sbjct: 3221 TKSGVVWTWGKGDYFRLGHGSDV-HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY 3279
Query: 195 GWGYSADGRIGN 206
WG + G+ GN
Sbjct: 3280 AWGDNDHGQQGN 3291
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS----DVTSVSAGHYHSLAVTNNGA 84
+ ++G G+ G LG G D P V GL DV + +G +LAVT NG
Sbjct: 572 LYTWGRGNYGRLG-----HGSSEDEAIPMLVAGLKGLKVIDV-ACGSGDAQTLAVTENGQ 625
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
VW+WG + +LGRG + T PK +E L ++V S A+ DG ++ WG
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKT---PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWG 682
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
K +LG G + P +E L G+K++ V+ G H LA TED ++ WG
Sbjct: 683 KGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 109/267 (40%), Gaps = 50/267 (18%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC-AA 124
V ++ G +S A+T G ++ WGR N +LG G+ E A P V GL + V A
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI---PMLVAGLKGLKVIDVA 609
Query: 125 FASGVVSS-AIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGH 183
SG + A+ ++G +W WG G+LG G P +E L +VKV G
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 184 ALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVS 243
++A T+DG+++ WG + R+G+
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGH------------------------------------- 691
Query: 244 EGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQ----LGRE 299
G E+ P + E +G +V+D+A G H L L + + S GSN Q L
Sbjct: 692 -GTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 748
Query: 300 KQDMGMFPVDINFHPVSISSGLGHSLA 326
K + P H V I+ G S A
Sbjct: 749 KPEPAALPGLDTKHIVGIACGPAQSFA 775
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 123/305 (40%), Gaps = 64/305 (20%)
Query: 78 AVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDD 137
A T V+ WG N++ QLG G S+ P E L +NV A+ +
Sbjct: 2954 AATIRTKVFVWGLNDKDQLG-GLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG--HALAQTEDGKLFG 195
G ++ G++ G+LGLG +P ++ AL+ + KV+ G HA A T DGK+F
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 196 WGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPII 255
WG DG++G+ + N D+
Sbjct: 3071 WGEGDDGKLGHFSRM--------NCDK--------------------------------- 3089
Query: 256 WEPFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF 312
P L+E ++ + DIACG HS L +G L + G YG+LG
Sbjct: 3090 --PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN-------TTQL 3140
Query: 313 HPVSISSGLGHSL--AICEVRSSNVTG-GARGIV-SWGWNRSSQLGRMGPD--NVPLVVE 366
P + LGH + C R + G+V SWG +LGR G + N+P +E
Sbjct: 3141 KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE 3200
Query: 367 GLEGE 371
L G+
Sbjct: 3201 RLNGQ 3205
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 130/301 (43%), Gaps = 55/301 (18%)
Query: 77 LAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--CAAFASGVVSSAI 134
AVT +G ++A G +LG G ES +T P +E + V + A + G A+
Sbjct: 3998 FAVTADGKLYATGYGAGGRLGIGGTESVST---PTLLESIQHVFIKKVAVNSGGKHCLAL 4054
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
+G ++ WG+++ G+LG G + + P +E+L G ++V V+ G H+ T G L+
Sbjct: 4055 SSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4113
Query: 195 GWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPI 254
WG GR G LG S+S+ ++ +E Q
Sbjct: 4114 TWG---KGRYGRLGH--------------SDSEDQLKPKLVEALQ--------------- 4141
Query: 255 IWEPFLVEGVEVVDIACGF--DHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF 312
G VVDIACG +L L + + S G YG+LGR D P+ I+
Sbjct: 4142 --------GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS 4193
Query: 313 HPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEG 370
+GLG C + S + + +WG +LG D+V P V+GL+G
Sbjct: 4194 -----LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQG 4248
Query: 371 E 371
+
Sbjct: 4249 K 4249
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 79/168 (47%), Gaps = 32/168 (19%)
Query: 31 SFGDGSQGALG--------LPT---SLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAV 79
S+GDG G LG +P SLTG+G V V G S+A+
Sbjct: 4168 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG---------------VVKVECGSQFSVAL 4212
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T +GAV+ WG+ + +LG G S P++V+GL V A + +DG
Sbjct: 4213 TKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269
Query: 140 LWVWGKSKRGQLGLGKDITEAIV-PSRVEALAGEKIVKVSFGWGHALA 186
++ WG + GQLG G T AI P V AL G+K+ +V+ G H LA
Sbjct: 4270 VYTWGDNDEGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 138/335 (41%), Gaps = 46/335 (13%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVC 122
+V V+ G AVT G V+A G +LG G S T P+++ L V
Sbjct: 2993 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI--SSGTVPIPRQITALSSYVVKKV 3050
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
A + G ++A+ DG ++ WG+ G+LG + P +EAL ++I ++ G
Sbjct: 3051 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSS 3109
Query: 183 HALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLV 242
H+ A T G+L+ WG GR+G+ + P + Q S + L
Sbjct: 3110 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3169
Query: 243 SEGM----------------EKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLL 286
EG+ + +P E + G V I CG SL L ++GV+
Sbjct: 3170 DEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 287 SCGSNVYGQLG-------REKQDM-GMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGG 338
+ G Y +LG R+ Q + G+ I V ++ G H LA+ +
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI----VHVAVGALHCLAVTD--------- 3274
Query: 339 ARGIVSWGWNRSSQLGR--MGPDNVPLVVEGLEGE 371
+ + +WG N Q G + P +V+GLEG+
Sbjct: 3275 SGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQ 3309
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 135/334 (40%), Gaps = 84/334 (25%)
Query: 56 PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P + GL + VT ++ L ++ NG V+ N++ P+ V+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLA-------------PQLVQ 488
Query: 115 GLDQVNVC--AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEAL--- 169
GL N+ AA + G A+ G ++ WG G+LG G D P + A
Sbjct: 489 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG-DTVPLEEPKVISAFSGK 547
Query: 170 -AGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQ 228
AG+ +V ++ G ++ A T +G+L+ WG GR+G+ S D+
Sbjct: 548 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH----------------GSSEDE 591
Query: 229 EISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLV---EGVEVVDIACGF--DHSLVLGRNG 283
I P LV +G++V+D+ACG +L + NG
Sbjct: 592 AI---------------------------PMLVAGLKGLKVIDVACGSGDAQTLAVTENG 624
Query: 284 VLLSCGSNVYGQLGREKQDMGMFPVDI----NFHPVSISSGLGHSLAICEVRSSNVTGGA 339
+ S G YG+LGR D P I + V + G S+A+ +
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK---------D 675
Query: 340 RGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEGE 371
+ SWG + +LG ++V P ++EGL+G+
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 709
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 113/268 (42%), Gaps = 52/268 (19%)
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
G G+++ WG + RGQLG G + + VP+ EALA + V++ G A T DGKL+
Sbjct: 3949 GGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 4007
Query: 195 GWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTI------EKAQKLVSEGMEK 248
GY A GR+G G S+P ES Q + + + L SEG
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTP------TLLESIQHVFIKKVAVNSGGKHCLALSSEG--- 4058
Query: 249 EKYMPIIW-----------------EPFLVE---GVEVVDIACGFDHSLVLGRNGVLLSC 288
E Y W P ++E G+EVVD+A G HS + G L +
Sbjct: 4059 EVYS---WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 289 GSNVYGQLGREKQDMGMFPVDIN----FHPVSISSGLGHSLAICEVRSSNVTGGARGIVS 344
G YG+LG + + P + V I+ G G + +C V S
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW-------S 4168
Query: 345 WGWNRSSQLGRMGPD--NVPLVVEGLEG 370
WG +LGR G D VP+ ++ L G
Sbjct: 4169 WGDGDYGKLGRGGSDGCKVPMKIDSLTG 4196
Score = 38.9 bits (89), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 28 AVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP-SDVTSVSAGHYHSLAVTNNGAVW 86
AV ++G G LG G P +V GL V +++ G H + T +G V+
Sbjct: 4217 AVYTWGKGDYHRLG-----HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVY 4271
Query: 87 AWGRNNEVQLGRG 99
WG N+E QLG G
Sbjct: 4272 TWGDNDEGQLGDG 4284
Score = 35.4 bits (80), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 15/90 (16%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRN 91
G G++ + P L G+ G V V+AG H LA+T + V +WG N
Sbjct: 689 LGHGTEEHVRYPKLLEGLQG------------KKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Query: 92 NEVQLGRGALESRATWNDPKRVEGLDQVNV 121
++ Q R T +P + GLD ++
Sbjct: 737 DQCQHFDTL---RVTKPEPAALPGLDTKHI 763
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 61/312 (19%)
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFAS 127
+V++G H LA+++ G V++WG + +LG G +R+ + P+ +E L + V A
Sbjct: 4045 AVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG---NRSPCDRPRVIESLRGIEVVDVAAG 4101
Query: 128 GVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHA--L 185
G S+ + G L+ WGK + G+LG D + + P VEAL G +++ ++ G G A L
Sbjct: 4102 GAHSACVTAAGDLYTWGKGRYGRLG-HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL 4160
Query: 186 AQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEG 245
T+D ++ WG DG G LG+ S + K+ S
Sbjct: 4161 CLTDDDTVWSWG---DGDYGKLGRG--------------------GSDGCKVPMKIDS-- 4195
Query: 246 MEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM 305
+ G+ VV + CG S+ L ++G + + G Y +LG D
Sbjct: 4196 ---------------LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4240
Query: 306 FPVDIN----FHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV 361
P + ++I++G H +C V +WG N QLG + +
Sbjct: 4241 RPRQVQGLQGKKVIAIATGSLH--CVCCTEDGEV-------YTWGDNDEGQLGDGTTNAI 4291
Query: 362 --PLVVEGLEGE 371
P +V L+G+
Sbjct: 4292 QRPRLVAALQGK 4303
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
+LA+T+ G V++WG + +LGRG E N P+ +E L+ VC S A+
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRGGSEG---CNIPQNIERLNGQGVCQIECGAQFSLAL 3221
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
G +W WGK +LG G D+ P VE L G+KIV V+ G H LA T+ G+++
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDV-HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY 3280
Query: 195 GWGYSADGRIGN 206
WG + G+ GN
Sbjct: 3281 AWGDNDHGQQGN 3292
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS----DVTSVSAGHYHSLAVTNNGA 84
+ ++G G+ G LG G D P V GL DV + +G +LAVT NG
Sbjct: 573 LYTWGRGNYGRLG-----HGSSEDEAIPMLVAGLKGLKVIDV-ACGSGDAQTLAVTENGQ 626
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
VW+WG + +LGRG + T PK +E L ++V S A+ DG ++ WG
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT---PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWG 683
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
K +LG G + P +E L G+K++ V+ G H LA TED ++ WG
Sbjct: 684 KGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 110/267 (41%), Gaps = 50/267 (18%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC-AA 124
V ++ G +S A+T G ++ WGR N +LG G+ E A P V GL + V A
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI---PMLVAGLKGLKVIDVA 610
Query: 125 FASGVVSS-AIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGH 183
SG + A+ ++G +W WG G+LG G P +E L ++KV G
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIEKLQDLDVIKVRCGSQF 669
Query: 184 ALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVS 243
++A T+DG+++ WG + R+G+
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGH------------------------------------- 692
Query: 244 EGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQ----LGRE 299
G E+ P + E +G +V+D+A G H L L + + S GSN Q L
Sbjct: 693 -GTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVT 749
Query: 300 KQDMGMFPVDINFHPVSISSGLGHSLA 326
K + P + H V I+ G S A
Sbjct: 750 KPEPTALPGLDSKHIVGIACGPAQSFA 776
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 122/303 (40%), Gaps = 64/303 (21%)
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T V+ WG N++ QLG G S+ P E L +NV A+ +G
Sbjct: 2957 TIRTKVFVWGLNDKDQLG-GLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 3013
Query: 140 LWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG--HALAQTEDGKLFGWG 197
++ G++ G+LGLG +P ++ AL+ + KV+ G HA A T DGK+F WG
Sbjct: 3014 VYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073
Query: 198 YSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWE 257
DG++G+ + N D+
Sbjct: 3074 EGDDGKLGHFSRM--------NCDK----------------------------------- 3090
Query: 258 PFLVEGVE---VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHP 314
P L+E ++ + DIACG HS L +G L + G YG+LG P
Sbjct: 3091 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN-------TTQLKP 3143
Query: 315 VSISSGLGHSL--AICEVRSSNVTG-GARGIV-SWGWNRSSQLGRMGPD--NVPLVVEGL 368
+ LGH + C R + G+V SWG +LGR G + N+P +E L
Sbjct: 3144 KMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL 3203
Query: 369 EGE 371
G+
Sbjct: 3204 NGQ 3206
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 131/306 (42%), Gaps = 55/306 (17%)
Query: 72 GHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNV--CAAFASGV 129
G AVT +G ++A G +LG G ES +T P +E + V + A + G
Sbjct: 3995 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVST---PTLLESIQHVFIKKVAVNSGGK 4051
Query: 130 VSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTE 189
A+ +G ++ WG+++ G+LG G + + P +E+L G ++V V+ G H+ T
Sbjct: 4052 HCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA 4110
Query: 190 DGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKE 249
G L+ WG GR G LG S+S+ ++ +E Q
Sbjct: 4111 AGDLYTWG---KGRYGRLGH--------------SDSEDQLKPKLVEALQ---------- 4143
Query: 250 KYMPIIWEPFLVEGVEVVDIACGF--DHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP 307
G V+DIACG +L L + + S G YG+LGR D P
Sbjct: 4144 -------------GHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVP 4190
Query: 308 VDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVV 365
+ I+ +GLG C + S + + +WG +LG D+V P V
Sbjct: 4191 MKIDS-----LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 4245
Query: 366 EGLEGE 371
+GL+G+
Sbjct: 4246 QGLQGK 4251
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 79/168 (47%), Gaps = 32/168 (19%)
Query: 31 SFGDGSQGALG--------LPT---SLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAV 79
S+GDG G LG +P SLTG+G V V G S+A+
Sbjct: 4170 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG---------------VVKVECGSQFSVAL 4214
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T +GAV+ WG+ + +LG G S P++V+GL V A + +DG
Sbjct: 4215 TKSGAVYTWGKGDYHRLGHG---SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271
Query: 140 LWVWGKSKRGQLGLGKDITEAIV-PSRVEALAGEKIVKVSFGWGHALA 186
++ WG + GQLG G T AI P V AL G+K+ +V+ G H LA
Sbjct: 4272 VYTWGDNDEGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 133/331 (40%), Gaps = 38/331 (11%)
Query: 65 DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--VNVC 122
+V V+ G AVT G V++ G +LG G S T P+++ L V
Sbjct: 2994 NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGM--SSGTVPIPRQITALSSYVVKKV 3051
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
A + G ++A+ DG ++ WG+ G+LG + P +EAL ++I ++ G
Sbjct: 3052 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSS 3110
Query: 183 HALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLV 242
H+ A T G+L+ WG GR+G+ + P + Q S + L
Sbjct: 3111 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 3170
Query: 243 SEGM----------------EKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLL 286
EG+ + +P E + G V I CG SL L ++GV+
Sbjct: 3171 DEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 287 SCGSNVYGQLGREKQDMGMFPVDIN----FHPVSISSGLGHSLAICEVRSSNVTGGARGI 342
+ G Y +LG P + V ++ G H LA+ + + +
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD---------SGQV 3279
Query: 343 VSWGWNRSSQLGR--MGPDNVPLVVEGLEGE 371
+WG N Q G + P +V+GLEG+
Sbjct: 3280 YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQ 3310
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 135/334 (40%), Gaps = 84/334 (25%)
Query: 56 PTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
P + GL S V V+ L ++ NG V+ N+++ P+ V+
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLA-------------PQLVQ 489
Query: 115 GLDQVNVC--AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEAL--- 169
GL N+ AA + G A+ G ++ WG G+LG G D P + A
Sbjct: 490 GLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG-DTVPLEEPKVISAFSGK 548
Query: 170 -AGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQ 228
AG+ +V ++ G ++ A T +G+L+ WG GR+G+ S D+
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH----------------GSSEDE 592
Query: 229 EISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLV---EGVEVVDIACGF--DHSLVLGRNG 283
I P LV +G++V+D+ACG +L + NG
Sbjct: 593 AI---------------------------PMLVAGLKGLKVIDVACGSGDAQTLAVTENG 625
Query: 284 VLLSCGSNVYGQLGREKQDMGMFPVDI----NFHPVSISSGLGHSLAICEVRSSNVTGGA 339
+ S G YG+LGR D P I + + + G S+A+ +
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTK---------D 676
Query: 340 RGIVSWGWNRSSQLGRMGPDNV--PLVVEGLEGE 371
+ SWG + +LG ++V P ++EGL+G+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGK 710
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 114/263 (43%), Gaps = 42/263 (15%)
Query: 135 GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLF 194
G G+++ WG + RGQLG G + + VP+ EALA + V++ G A T DGKL+
Sbjct: 3951 GGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLY 4009
Query: 195 GWGYSADGRIGNLGKALESSP-LDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMP 253
GY A GR+G G S+P L +I ++S + L SEG E Y
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG-KHCLALSSEG---EVYS- 4064
Query: 254 IIW-----------------EPFLVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVY 293
W P ++E G+EVVD+A G HS + G L + G Y
Sbjct: 4065 --WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 294 GQLGREKQDMGMFPVDIN----FHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNR 349
G+LG + + P + + I+ G G + +C V SWG
Sbjct: 4123 GRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVW-------SWGDGD 4175
Query: 350 SSQLGRMGPD--NVPLVVEGLEG 370
+LGR G D VP+ ++ L G
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTG 4198
Score = 39.3 bits (90), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 28 AVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP-SDVTSVSAGHYHSLAVTNNGAVW 86
AV ++G G LG G P +V GL V +++ G H + T +G V+
Sbjct: 4219 AVYTWGKGDYHRLG-----HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVY 4273
Query: 87 AWGRNNEVQLGRGA 100
WG N+E QLG G
Sbjct: 4274 TWGDNDEGQLGDGT 4287
Score = 35.8 bits (81), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 15/90 (16%)
Query: 32 FGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRN 91
G G++ + P L G+ G V V+AG H LA+T + V +WG N
Sbjct: 690 LGHGTEEHVRYPKLLEGLQG------------KKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Query: 92 NEVQLGRGALESRATWNDPKRVEGLDQVNV 121
++ Q R T +P + GLD ++
Sbjct: 738 DQCQHFDTL---RVTKPEPTALPGLDSKHI 764
>sp|Q8IS20|GEFC_DICDI Ras guanine nucleotide exchange factor C OS=Dictyostelium
discoideum GN=gefC PE=2 SV=1
Length = 1457
Score = 81.6 bits (200), Expect = 9e-15, Method: Composition-based stats.
Identities = 82/321 (25%), Positives = 137/321 (42%), Gaps = 65/321 (20%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLG---------------------------- 97
+ V+ G+YH + +T G VW WG N+ QLG
Sbjct: 335 IKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVDTQQQQQQQLQQQQSMSSLQPSASS 394
Query: 98 -RGALESRATWNDPKRVEGLDQVNVCAAFASGVV-SSAIGDDGSLWVWGKSKRGQLGLGK 155
+ S T PK VE + A+GV ++A+ + G L++WG ++ G+LGLG
Sbjct: 395 SSPSSSSLQTTCTPKMVE----IKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLG- 449
Query: 156 DITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSAD-GRIGNLGKALESS 214
D + P+RV L E + ++ H+ TE GK++ WG S + G+I + L
Sbjct: 450 DTIDRRTPTRVIRLKNEVVSTIACSSTHSACYTESGKMYVWGQSDETGKIQAIPSPL--- 506
Query: 215 PLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPII--------WE------PF- 259
P+ S +DR +S + + ++ + ++ WE P
Sbjct: 507 PIHSYLDREIKSPNGGGVGGFFGGGGKIKQLACGQRCIAVLTQMGEVFMWEIPGIPIPLR 566
Query: 260 -LVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR-EKQDMGMFPVDINFHP--- 314
+E V +I G H + L +G +++ G N GQLGR + ++ ++F P
Sbjct: 567 NALENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLGRTDAENEPGIVKQLSFDPDGL 626
Query: 315 ------VSISSGLGHSLAICE 329
VSI++G HS+A+ E
Sbjct: 627 NSDEFVVSIAAGEFHSVALVE 647
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 81.6 bits (200), Expect = 9e-15, Method: Composition-based stats.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 27/193 (13%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-----VTSVSAGHYHSLAVTNNGAV 85
+FG G G LGL G + P L + +S+G HSL +TN G V
Sbjct: 361 TFGRGDHGRLGL-------GEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLV 413
Query: 86 WAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ--------VNVCAAFASGVVSSAIGDD 137
+++GRN++ QLG G ++ T PK+++ +N+ A G S AI D+
Sbjct: 414 FSFGRNDQGQLGIGCFSNQQTI--PKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDN 471
Query: 138 GSLWVWGKSKRGQLGLGKDIT-----EAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGK 192
+ WG+S G LG D+ ++ S + K + VS G+ H +A + DG
Sbjct: 472 NDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGS 531
Query: 193 LFGWGYSADGRIG 205
L+ WG +A R+G
Sbjct: 532 LYSWGCNAGQRLG 544
Score = 66.2 bits (160), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/252 (21%), Positives = 111/252 (44%), Gaps = 47/252 (18%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
+ +S G S +T+ G ++ +GR + +LG G +S + PK V+ L +
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGE-QSLLMQSTPKLVQSLQGHFIIDMS 398
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGE--------KIVKV 177
+ G S + + G ++ +G++ +GQLG+G + +P +++ I+KV
Sbjct: 399 SGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKV 458
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEK 237
S G H++A +++ + WG S G +G + +D DR+
Sbjct: 459 SAGGYHSIAISDNNDTYAWGRSDYGVLG--------TSIDVQGDRN-------------- 496
Query: 238 AQKLVSEGMEKEKYMPIIW--EPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQ 295
+P++ +V+ V+ +D++ GF H++ + +G L S G N +
Sbjct: 497 --------------LPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQR 542
Query: 296 LGREKQDMGMFP 307
LG + + + P
Sbjct: 543 LGFKSDENQLTP 554
Score = 52.0 bits (123), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 29 VVSFGDGSQGALGL-----PTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNG 83
V SFG QG LG+ ++ + P ++ VSAG YHS+A+++N
Sbjct: 413 VFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNN 472
Query: 84 AVWAWGRNNEVQLGRGALESRATWNDPKR-------VEGLDQVNVCAAFASGVVSSAIGD 136
+AWGR++ LG +++ + N P V+ + ++V + F V A+
Sbjct: 473 DTYAWGRSDYGVLGT-SIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNV---AMSI 528
Query: 137 DGSLWVWGKSKRGQLGLGKD 156
DGSL+ WG + +LG D
Sbjct: 529 DGSLYSWGCNAGQRLGFKSD 548
Score = 50.8 bits (120), Expect = 1e-05, Method: Composition-based stats.
Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 26/255 (10%)
Query: 114 EGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGE- 172
E +Q + + SS I D G+L+ +G G+LG G ++ P VE +
Sbjct: 183 EMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHG-NLESYSSPKLVEFFQTKP 241
Query: 173 --KIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESS----PLDSNIDRSSES 226
++V ++ G H+LA T GK++ WG + ++G LG SS P N + S +
Sbjct: 242 SLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLG-LGNGSSSSYYSLPQLINFNISYNN 300
Query: 227 DQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLL 286
+ +++ + ++++ +++V ++CG + S V+ G+L
Sbjct: 301 NNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLF 360
Query: 287 SCGSNVYGQLGREKQDMGMFPV-----DINFH-PVSISSGLGHSLAICEVRSSNVTGGAR 340
+ G +G+LG +Q + M + H + +SSG GHSL + +
Sbjct: 361 TFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTN----------K 410
Query: 341 GIV-SWGWNRSSQLG 354
G+V S+G N QLG
Sbjct: 411 GLVFSFGRNDQGQLG 425
Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats.
Identities = 82/373 (21%), Positives = 133/373 (35%), Gaps = 134/373 (35%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLD---QVNVC 122
+ +S G HS +T+ G ++ +G +LG G LES ++ PK VE + V
Sbjct: 190 IVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLES---YSSPKLVEFFQTKPSLRVV 246
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGL--GKDITEAIVPSRVE------------- 167
+ G S A+ G ++ WG + QLGL G + +P +
Sbjct: 247 SIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNN 306
Query: 168 ---------------------------ALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSA 200
KIVK+S G + T+ G LF +G
Sbjct: 307 NNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGD 366
Query: 201 DGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFL 260
GR+G LG+ S ++ KLV
Sbjct: 367 HGRLG-LGE---------------------QSLLMQSTPKLVQS---------------- 388
Query: 261 VEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF-------------- 306
++G ++D++ G HSLVL G++ S G N GQLG +G F
Sbjct: 389 LQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLG-----IGCFSNQQTIPKQIQWFQ 443
Query: 307 --------PVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRS------SQ 352
P++I + +S+G HS+AI + ++ W RS +
Sbjct: 444 TSQQQQQQPINI----IKVSAGGYHSIAISDNND-----------TYAWGRSDYGVLGTS 488
Query: 353 LGRMGPDNVPLVV 365
+ G N+P+++
Sbjct: 489 IDVQGDRNLPVLI 501
Score = 38.9 bits (89), Expect = 0.060, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 15/76 (19%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRV-------PGLPSDVTSVSAGHYHSLAVTNNG 83
+FGDG G LG ++Y ++ P L V S++ G HSLA+T G
Sbjct: 211 TFGDGLLGKLGHGNL------ESYSSPKLVEFFQTKPSL--RVVSIANGGKHSLALTICG 262
Query: 84 AVWAWGRNNEVQLGRG 99
V++WG N+ QLG G
Sbjct: 263 KVYSWGGNDSCQLGLG 278
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 144/343 (41%), Gaps = 83/343 (24%)
Query: 56 PTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGR----NNEVQLGRGALESRATWNDPK 111
P R+P L ++V VS G + VT +G + W + E L GA+E +
Sbjct: 332 PLRLPMLNTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLP-GAVEQMQPQFISR 390
Query: 112 RVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGK--DITEAIVPSRVEAL 169
+EG V + + + ++ + D G + +G G LG G D+T+ P VEAL
Sbjct: 391 FLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQ---PKIVEAL 447
Query: 170 AGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQE 229
G ++V+VS G H LA T + ++F WG +GR+G + + P Q+
Sbjct: 448 LGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCP------------QQ 495
Query: 230 ISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCG 289
+S +AQ+++ CG D S+++ +L+CG
Sbjct: 496 VSLPADFEAQRVL----------------------------CGVDCSMIMSTQHQILACG 527
Query: 290 SNVYGQLGREK-------------QDMGMF------PVDINFHPVSISSGLGHSLAICEV 330
+N + +LG +K +++ +F P++ V I G HS+A+ E
Sbjct: 528 NNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTE-KIVYIDIGTAHSVAVTE- 585
Query: 331 RSSNVTGGARG-IVSWGWNRSSQLG--RMGPDNVPLVVEGLEG 370
+G ++G N+ QLG VP V GL+G
Sbjct: 586 ---------KGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQG 619
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 138/321 (42%), Gaps = 79/321 (24%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP-SDVTSVSAGHYHSLAVTNNGAVWA 87
+++FG GS G LG G D +P V L ++ VS G H LAVTN V++
Sbjct: 419 IMTFGSGSNGCLG-----HGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFS 473
Query: 88 WGRNNEVQLGRGALESRATWNDPKRV----EGLDQVNVCAAFASGVVSSAIGDDGSLWVW 143
WGR + GR L ++ + N P++V + Q +C S ++S+ +
Sbjct: 474 WGRGDN---GRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIMST----QHQILAC 526
Query: 144 GKSKRGQLGLGK-----------DITEAIVPSRVEA--LAGEKIVKVSFGWGHALAQTED 190
G ++ +LGL K + E + V++ L EKIV + G H++A TE
Sbjct: 527 GNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEK 586
Query: 191 GKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEK 250
G+ F +G + G++G + RSS
Sbjct: 587 GQCFTFGSNQHGQLG------------CSHRRSSRV------------------------ 610
Query: 251 YMPIIWEPFLVEGVEVVDI-ACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM-FPV 308
P+ V G++ + + ACG +L +G G + + G G+LGR+++D G+ PV
Sbjct: 611 -------PYQVSGLQGITMAACGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDFGIPKPV 663
Query: 309 DIN----FHPVSISSGLGHSL 325
++ F S++ G++L
Sbjct: 664 QLDESHAFTVTSVACCHGNTL 684
>sp|Q54VW7|GACGG_DICDI Rho GTPase-activating protein gacGG OS=Dictyostelium discoideum
GN=gacGG PE=3 SV=1
Length = 1203
Score = 80.1 bits (196), Expect = 3e-14, Method: Composition-based stats.
Identities = 87/341 (25%), Positives = 161/341 (47%), Gaps = 55/341 (16%)
Query: 36 SQGALGLPTSLTGVGGDAY--EPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNE 93
SQ + LP + GD + +PT P +P ++ + G+ HSLA+T G ++ WG N
Sbjct: 5 SQENISLPQGVLYCWGDKFSGKPTFNPLIP-NICFMDNGYNHSLALTETGELYGWGDNRH 63
Query: 94 VQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGL 153
QL ++ + + P +++ + V + G S+AI ++G L+VWG L
Sbjct: 64 HQLSSN--KAITSIDKPIKIQVIPNQRVKSISCGGNFSAAIMENGLLYVWGT-----LIE 116
Query: 154 GKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT----EDGKLFGWGYSADGRIGNLGK 209
G TE+ P++V+ L G V + +A + E ++ WG + G++G +G
Sbjct: 117 GGKCTES--PTKVDLLKGVTCVSIGINHCAVVADSPTTPEKRSVYTWGTNRKGQLGVVGD 174
Query: 210 ALESSPLDSNIDRSSES---DQEISSSTIE----------KAQKLVSEGMEKEKYMPIIW 256
++ ++P + + S +E +++ +E K++++ S ++ +P+
Sbjct: 175 SITNAPRRVTLGSKAISVCCGEEFTAAIVEGNEVFVWGYNKSRQICSNNSDEIISIPV-- 232
Query: 257 EPFLVEGVEVVDIACGFDHSLVLGRNGVLLSC--GSNVYGQLGREKQDMGM-FPVDINFH 313
+PFL G ++V+++C ++ + R+GV C GSN Q+ R D + FP I
Sbjct: 233 KPFL--GRDIVELSCTKNY--IAARSGVGNVCVWGSN--EQVCRIGDDKFINFPNKIK-- 284
Query: 314 PVSISSGLGHSLAICEVRSSNVTGGARG-IVSWGWNRSSQL 353
IS+ H L + E +G I SWG + +QL
Sbjct: 285 --QISASTSHILVLSE----------KGEIFSWGNSEDNQL 313
Score = 48.5 bits (114), Expect = 7e-05, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 56/206 (27%)
Query: 50 GGDAYE-PTRVPGLPSDVTSVSAGHYHSLAVTNNG------AVWAWGRNNEVQLGRGALE 102
GG E PT+V L VT VS G H V ++ +V+ WG N + QLG +
Sbjct: 117 GGKCTESPTKV-DLLKGVTCVSIGINHCAVVADSPTTPEKRSVYTWGTNRKGQLG---VV 172
Query: 103 SRATWNDPKRVE-GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLG--------- 152
+ N P+RV G ++VC ++AI + ++VWG +K Q+
Sbjct: 173 GDSITNAPRRVTLGSKAISVCCGEE---FTAAIVEGNEVFVWGYNKSRQICSNNSDEIIS 229
Query: 153 ------LGKDITE-AIVPSRVEALAG-------------------------EKIVKVSFG 180
LG+DI E + + + A +G KI ++S
Sbjct: 230 IPVKPFLGRDIVELSCTKNYIAARSGVGNVCVWGSNEQVCRIGDDKFINFPNKIKQISAS 289
Query: 181 WGHALAQTEDGKLFGWGYSADGRIGN 206
H L +E G++F WG S D ++ +
Sbjct: 290 TSHILVLSEKGEIFSWGNSEDNQLSH 315
Score = 47.0 bits (110), Expect = 3e-04, Method: Composition-based stats.
Identities = 55/220 (25%), Positives = 85/220 (38%), Gaps = 60/220 (27%)
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G L+ WG G K ++P+ I + G+ H+LA TE G+L+GWG
Sbjct: 14 GVLYCWGDKFSG-----KPTFNPLIPN---------ICFMDNGYNHSLALTETGELYGWG 59
Query: 198 YSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWE 257
D R L S++ I+S I+K K+
Sbjct: 60 ---DNRHHQL-----------------SSNKAITS--IDKPIKIQ--------------- 82
Query: 258 PFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSI 317
++ V I+CG + S + NG+L G+ + G E VD+ +
Sbjct: 83 --VIPNQRVKSISCGGNFSAAIMENGLLYVWGTLIEGGKCTESPT----KVDLLKGVTCV 136
Query: 318 SSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMG 357
S G+ H + + S T R + +WG NR QLG +G
Sbjct: 137 SIGINHCAVVAD---SPTTPEKRSVYTWGTNRKGQLGVVG 173
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 119/300 (39%), Gaps = 57/300 (19%)
Query: 69 VSAGHYHSLAVTNNGAVWAW-----GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCA 123
V AG H VT ++ W G QLG G RA++ PK VE L +V
Sbjct: 356 VCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHG---DRASYRQPKHVEKLQGKSVQK 412
Query: 124 AFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDI-TEAIVPSRVEALAGEKIVKVSFGWG 182
+ I D+G L+ +G G LG+ + +E + P V+ E + +VS G
Sbjct: 413 VSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDS 472
Query: 183 HALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLV 242
H +A T ++ WG GR+G LDS D S E+
Sbjct: 473 HIMALTRSKSVYSWGCGEYGRLG----------LDSEDDVYSPQKVEVQ----------- 511
Query: 243 SEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQD 302
G+ +V++ CG D S +L G +L+CG N + +LG +
Sbjct: 512 -------------------RGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYT 552
Query: 303 MGMFPVD-INFHPVSISSGLGHSLAICEVRS------SNVTGGARG-IVSWGWNRSSQLG 354
G+ + P + S L L+ ++RS RG ++++G N+ QLG
Sbjct: 553 AGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG 612
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG-LPSDVTSVSAGHYHSLAVTNNGAVWA 87
+ SFG G LG+ S G + EP V L V VS G H +A+T + +V++
Sbjct: 429 LYSFGSDYYGCLGVNQS---AGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYS 485
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVE---GLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
WG + GR L+S P++VE GL VNVC + + G + G
Sbjct: 486 WGCG---EYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLT---GKVLACG 539
Query: 145 KSKRGQLGLGKDITEAI-------VP-----SRVEALAGEKIVKVSFGWGHALAQTEDGK 192
++ +LGL + I VP + + L+ KI +S G H A E G+
Sbjct: 540 LNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGR 599
Query: 193 LFGWGYSADGRIG 205
L +G + G++G
Sbjct: 600 LLTFGSNKCGQLG 612
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 81/199 (40%), Gaps = 20/199 (10%)
Query: 20 FMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVP---GLPSDVTSVSAGHYHS 76
M +V S+G G G LGL + D Y P +V GL + +V G S
Sbjct: 474 IMALTRSKSVYSWGCGEYGRLGLDSE-----DDVYSPQKVEVQRGLC--IVNVCCGSDGS 526
Query: 77 LAVTNNGAVWAWGRNNEVQLG-----RGALESRATWNDPKRV-----EGLDQVNVCAAFA 126
+T G V A G N +LG G + A P + L + +
Sbjct: 527 FLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISP 586
Query: 127 SGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALA 186
++AI + G L +G +K GQLG+G + L G+++++VS G A
Sbjct: 587 GRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTA 646
Query: 187 QTEDGKLFGWGYSADGRIG 205
T D +F WG +GR+
Sbjct: 647 ATADNHIFAWGNGGNGRLA 665
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 147/357 (41%), Gaps = 81/357 (22%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD---VTSVSAGHYHSLAVTNNGAV 85
V FG GS LG+ V Y P P L +D V ++ G HS A++++G V
Sbjct: 73 VYVFGSGSMNELGMGEEEMDV---VYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRV 129
Query: 86 WAWGRNNEVQLGRGALESRATWND----------PKRVEG-LDQVNVCAAFASGVVSSAI 134
+ WG N++ LGR + + D P +VEG L + V S +++AI
Sbjct: 130 YTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAI 189
Query: 135 GDDGSLWVWG--KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGK 192
D+G + WG + G LG P+++ +I +++ G H +A T GK
Sbjct: 190 TDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRL---PEICQLATGTDHIIALTTTGK 246
Query: 193 LFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYM 252
++ WG +G+ LG+ + +E+ +
Sbjct: 247 VYTWG---NGQQFQLGRRM----------------------------------LERRRLQ 269
Query: 253 PIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQD-----MGMFP 307
+ +P ++ ++ + G HS + G + + G N+ Q G E +D + P
Sbjct: 270 GLTPQPLALKN--IISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKP 327
Query: 308 VDIN----FHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN 360
++ ++ SI+ G H+LA+ E R +++WG + QLG PDN
Sbjct: 328 TLVDALEGYNVKSITGGEHHTLALLE--------DGR-VLAWGRDDRHQLGI--PDN 373
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 113/258 (43%), Gaps = 48/258 (18%)
Query: 55 EPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
EPT++ LP ++ ++ G H +A+T G V+ WG + QLGR LE R R++
Sbjct: 219 EPTQM-RLP-EICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERR-------RLQ 269
Query: 115 GLDQ-----VNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLG-KDITEAIV---PSR 165
GL N+ + A S AI + G ++ WG + Q G+ +D E V P+
Sbjct: 270 GLTPQPLALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTL 329
Query: 166 VEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSE 225
V+AL G + ++ G H LA EDG++ WG ++G AL
Sbjct: 330 VDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNAL-------------- 375
Query: 226 SDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGV-EVVDIACGFDHSLVLGRNGV 284
+ +V + Y+ P ++ G+ V+ + CG H+L + +G
Sbjct: 376 ------------PETVVKDEKGNNYYLST---PTIIPGLTNVIQVVCGTHHNLAVTSDGK 420
Query: 285 LLSCGSNVYGQLGREKQD 302
+ S GS ++G+ D
Sbjct: 421 VYSWGSAENYEVGQGDND 438
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 33/211 (15%)
Query: 16 TSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP------SDVTSV 69
T I + +G V ++G+G Q LG E R+ GL ++ SV
Sbjct: 235 TDHIIALTTTG-KVYTWGNGQQFQLGR---------RMLERRRLQGLTPQPLALKNIISV 284
Query: 70 SAGHYHSLAVTNNGAVWAWGRNNEVQLGRGA--LESRATWNDPKRVEGLDQVNVCAAFAS 127
AG YHS A+ N G V+AWG N Q G E A P V+ L+ NV +
Sbjct: 285 GAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGG 344
Query: 128 GVVSSAIGDDGSLWVWGKSKRGQLGLGKD-ITEAIV------------PSRVEALAGEKI 174
+ A+ +DG + WG+ R QLG+ + + E +V P+ + L +
Sbjct: 345 EHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTN--V 402
Query: 175 VKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
++V G H LA T DGK++ WG + + +G
Sbjct: 403 IQVVCGTHHNLAVTSDGKVYSWGSAENYEVG 433
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 18/134 (13%)
Query: 55 EPTRVPGLPS-DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLG--RGALESRATWND-- 109
+PT V L +V S++ G +H+LA+ +G V AWGR++ QLG AL ++
Sbjct: 326 KPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKG 385
Query: 110 -------PKRVEGLDQV--NVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEA 160
P + GL V VC + V+S DG ++ WG ++ ++G G + +
Sbjct: 386 NNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTS----DGKVYSWGSAENYEVGQGDNDEDV 441
Query: 161 IVPSRVEALAGEKI 174
VP+ V + A +++
Sbjct: 442 AVPTLVRSKAIKEV 455
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 115/273 (42%), Gaps = 50/273 (18%)
Query: 139 SLWVWGKSKRGQLGLGKDITEAIVPSRVEA-LAGEKI--VKVSFGWGHALAQTEDGKLFG 195
+++V+G +LG+G++ + + R+ L+ +K+ V ++ G H+ A + DG+++
Sbjct: 72 NVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYT 131
Query: 196 WGYSADGRIGNLGKALESS---PLDSNIDRSSESDQEISSSTIEKAQKLVSEGME---KE 249
WG + D +G L K + +D+++ + S E + S + + + S+ + +
Sbjct: 132 WGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITD 191
Query: 250 KYMPIIW--------------------EPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCG 289
W EP + E+ +A G DH + L G + + G
Sbjct: 192 NGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVYTWG 251
Query: 290 SNVYGQLGR----EKQDMGMFPVDINF-HPVSISSGLGHSLAICEVRSSNVTGGARGIVS 344
+ QLGR ++ G+ P + + +S+ +G HS AI + +
Sbjct: 252 NGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAI---------DNKGRVYA 302
Query: 345 WGWNRSSQLGRMGPD-------NVPLVVEGLEG 370
WG N + Q G D P +V+ LEG
Sbjct: 303 WGLNITRQCGIEVEDEEEGAVITKPTLVDALEG 335
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 29 VVSFGDGSQGALGLP------TSLTGVGGDAY---EPTRVPGLPSDVTSVSAGHYHSLAV 79
V+++G + LG+P T + G+ Y PT +PGL ++V V G +H+LAV
Sbjct: 357 VLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGL-TNVIQVVCGTHHNLAV 415
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVS 131
T++G V++WG ++G+G + R + + +V + A A G S
Sbjct: 416 TSDGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIKEVAIRVAGAGGQFS 467
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 122/272 (44%), Gaps = 53/272 (19%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLP-SDVTSVSAGHYHSLAVTNNGAVWA 87
V S+GDG G LG G P ++ L +V +S G HS VT++G ++
Sbjct: 4103 VFSWGDGDYGKLG-----HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4157
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSS-AIGDDGSL-WVWGK 145
+G + +LG G ++ P+RV L+ + A G+ + A+ DGS+ W +G
Sbjct: 4158 FGNGDYGRLGLGNTSNKKL---PERVTALEGYQI-GQVACGLNHTLAVSADGSMVWAFGD 4213
Query: 146 SKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIG 205
G+LGLG ++ P +++ L G I KV+ G ++A T+DG ++ +G D IG
Sbjct: 4214 GDYGKLGLGNSTAKS-SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG--QDRLIG 4270
Query: 206 NLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVE 265
L R+ Q+I P++ GV
Sbjct: 4271 ----------LPEGRARNHNRPQQI----------------------PVL------AGVI 4292
Query: 266 VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
+ D+A G +H+L L NG + + GSN GQLG
Sbjct: 4293 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLG 4324
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 125/311 (40%), Gaps = 70/311 (22%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD---VTSVSAGHYHSLAVTNNGAV 85
V S+GDG G LG G P + G P V VSAG+ HS AVT +G +
Sbjct: 479 VFSWGDGDYGKLG-----HGNSSTQKYPKLIQG-PLQGKVVVCVSAGYRHSAAVTEDGEL 532
Query: 86 WAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDG-SLWVWG 144
+ WG + +LG G SR N P V+ + V + +S + A+ DG ++W +G
Sbjct: 533 YTWGEGDFGRLGHGDSNSR---NIPTLVKDISNVGEVSCGSSHTI--ALSKDGRTVWSFG 587
Query: 145 KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRI 204
G+LG G D P +EAL G I KV G +LA T G+++ WG A
Sbjct: 588 GGDNGKLGHG-DTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGC 646
Query: 205 GNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGV 264
G SS KL+ E +
Sbjct: 647 G-------------------------SSEATALRPKLIEE----------------LAAT 665
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG---------REKQDMGMFPVDINFHPV 315
+VD++ G H L L + + + G+N GQ G + K+ G+ + I
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQ---- 721
Query: 316 SISSGLGHSLA 326
IS+G HSLA
Sbjct: 722 QISAGTSHSLA 732
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 43/253 (16%)
Query: 46 LTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRA 105
L G + P P S V G + + NG V A G + +LG+G +
Sbjct: 4010 LAEAGRNVMVPAAAPSF-SQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLH 4068
Query: 106 TWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSR 165
++G + + S S A+ + G ++ WG G+LG G + P +
Sbjct: 4069 VLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQR-RPRQ 4127
Query: 166 VEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSE 225
+EAL GE++V++S G+ H+ T DGKLF +G GR+G
Sbjct: 4128 IEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLG-------------------- 4167
Query: 226 SDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVL 285
+ +++ +K + V+ +EG ++ +ACG +H+L + +G +
Sbjct: 4168 ----LGNTSNKKLPERVTA----------------LEGYQIGQVACGLNHTLAVSADGSM 4207
Query: 286 L-SCGSNVYGQLG 297
+ + G YG+LG
Sbjct: 4208 VWAFGDGDYGKLG 4220
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 48 GVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATW 107
G +P P SD ++ AG Y + ++ +G+V A G+ + +LG G +++T
Sbjct: 388 GTQEKILQPKLAPSF-SDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446
Query: 108 NDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVE 167
V ++ S + A +G ++ WG G+LG G T+ P ++
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQK-YPKLIQ 505
Query: 168 -ALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
L G+ +V VS G+ H+ A TEDG+L+ WG GR+G+
Sbjct: 506 GPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 23 SASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPS-DVTSVSAGHYHSLAVTN 81
SA G+ V +FGDG G LGL G P ++ L + V+ G S+A+T
Sbjct: 4202 SADGSMVWAFGDGDYGKLGL-----GNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTK 4256
Query: 82 NGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLW 141
+G V+ +G++ + L G + N P+++ L V + + A+ +G ++
Sbjct: 4257 DGHVYTFGQDRLIGLPEGRARNH---NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVY 4313
Query: 142 VWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQT 188
WG + GQLGLG P+ V L G+ + ++S G H+ A T
Sbjct: 4314 AWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 96/249 (38%), Gaps = 52/249 (20%)
Query: 85 VWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG 144
V+ WG QL P + Q +C + V+ + +G++ G
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPAAAPSFSQA--QQVICGQNCTFVIQA----NGTVLACG 4052
Query: 145 KSKRGQLGLGK--DITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADG 202
+ G+LG G D+ V S ++ ++V GH++A TE G++F WG DG
Sbjct: 4053 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG---DG 4109
Query: 203 RIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVE 262
G LG N DR Q IE Q
Sbjct: 4110 DYGKLGHG--------NSDRQRRPRQ------IEALQ----------------------- 4132
Query: 263 GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN----FHPVSIS 318
G EVV ++CGF HS V+ +G L + G+ YG+LG P + + ++
Sbjct: 4133 GEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVA 4192
Query: 319 SGLGHSLAI 327
GL H+LA+
Sbjct: 4193 CGLNHTLAV 4201
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 124/302 (41%), Gaps = 66/302 (21%)
Query: 79 VTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAA--FASGVVSSAIGD 136
V+ V+ WG N+ QL G E PK A + + V+S+
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKIL---QPKLAPSFSDAQTIEAGQYCTFVIST---- 420
Query: 137 DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGW---GHALAQTEDGKL 193
DGS+ GK G+LGLG ++ + ++ I KVS GH LA T +G++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTL-KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEV 479
Query: 194 FGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMP 253
F WG DG G LG +SST +KY
Sbjct: 480 FSWG---DGDYGKLGHG--------------------NSST--------------QKYPK 502
Query: 254 IIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPV---DI 310
+I P ++G VV ++ G+ HS + +G L + G +G+LG + P DI
Sbjct: 503 LIQGP--LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI 560
Query: 311 NFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDNV--PLVVEGL 368
+ + +S G H++A+ + R + S+G + +LG + V P V+E L
Sbjct: 561 S-NVGEVSCGSSHTIAL--------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEAL 611
Query: 369 EG 370
+G
Sbjct: 612 QG 613
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 97/217 (44%), Gaps = 42/217 (19%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V+ G GS G +G+ + V A+ P +P P V ++ +YHS+ +T + V+ W
Sbjct: 901 VLVCGSGSYGQMGVDDDIKKVF--AFTP--LPLGPLRVRDIATHYYHSICITEDNRVFEW 956
Query: 89 GRN-NEVQLGRGALES------------------------RATWNDPKRVE----GLDQV 119
GRN E+++ ++ R N P + GL +V
Sbjct: 957 GRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPREDLGLREV 1016
Query: 120 ------NVCAAFASGVVSSA-IGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGE 172
N+ + A G+ SA I +G+L+ WGK QLG G E + P +V G
Sbjct: 1017 KHFLDGNI-VSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNK-NERMEPHQVFEPNGA 1074
Query: 173 KIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGK 209
K V VS G H +A T+DG +F WG + G+ G L K
Sbjct: 1075 KWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTK 1111
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 136/311 (43%), Gaps = 42/311 (13%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC--A 123
+ ++ G +HS + ++G++W +G QLG G + + P RV GL +C
Sbjct: 829 IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGG-RNNSNQLVPTRVNGL----ICKVT 883
Query: 124 AFASGVVSSAI-GDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWG 182
A G + + D G + V G GQ+G+ DI + + + L ++ ++ +
Sbjct: 884 QIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPL-PLGPLRVRDIATHYY 942
Query: 183 HALAQTEDGKLFGWGYSADGRIGNL--GKALESSPLDSNIDRSSESDQEISSSTIEKAQK 240
H++ TED ++F WG + + K + S+ L + D SS S + ST
Sbjct: 943 HSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPS-PSTNGSTPRVNLN 1001
Query: 241 LVSE------GMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYG 294
L +E G+ + K+ ++G +V +ACG HS ++ G L + G +
Sbjct: 1002 LPAEIPREDLGLREVKH--------FLDG-NIVSVACGLSHSALITSEGTLYTWGKGLDY 1052
Query: 295 QLGREKQDMGMFPVDINFHP-----VSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNR 349
QLG ++ M P + F P V++S G H++A + S + +WG N
Sbjct: 1053 QLGHGNKNERMEPHQV-FEPNGAKWVNVSLGNNHTIASTDDGS---------VFAWGKND 1102
Query: 350 SSQLGRMGPDN 360
Q G + N
Sbjct: 1103 FGQCGVLTKKN 1113
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 94/239 (39%), Gaps = 58/239 (24%)
Query: 122 CAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGE--KIVKVSF 179
C A V+SS+ G L WG ++ GQ G+G A + + G+ I K++
Sbjct: 783 CGAEHILVLSSS----GQLSAWGGNRFGQCGVGHSFRIA----NLHQVDGDWPAIEKIAC 834
Query: 180 GWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQ 239
G H+ DG L+ +G+ G++G+ G+ + S+Q +
Sbjct: 835 GQFHSAFICSDGSLWTFGWGVWGQLGHGGR--------------NNSNQLV--------- 871
Query: 240 KLVSEGMEKEKYMPIIWEPFLVEGV--EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLG 297
P V G+ +V IACG H++VL G +L CGS YGQ+G
Sbjct: 872 ------------------PTRVNGLICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMG 913
Query: 298 REKQDMGMFPVDINFHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRM 356
+ +F F P+ + +A S +T R + WG N RM
Sbjct: 914 VDDDIKKVFA----FTPLPLGPLRVRDIATHYYHSICITEDNR-VFEWGRNPQELKMRM 967
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 79/188 (42%), Gaps = 32/188 (17%)
Query: 188 TEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGME 247
TED +L WG N + +E +++ RS S A L +
Sbjct: 716 TEDDRLMIWG-----NFTNAQQRMEMPQMNAKSKRSD--------SVTNGAPTLPPPAPK 762
Query: 248 KEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQ--LGREKQDMGM 305
E+++P + E G IACG +H LVL +G L + G N +GQ +G + +
Sbjct: 763 PEQHLPRVLE---YPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANL 819
Query: 306 FPVDINFHPV-SISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLGRMGPDN---- 360
VD ++ + I+ G HS IC S + ++GW QLG G +N
Sbjct: 820 HQVDGDWPAIEKIACGQFHSAFICSDGS---------LWTFGWGVWGQLGHGGRNNSNQL 870
Query: 361 VPLVVEGL 368
VP V GL
Sbjct: 871 VPTRVNGL 878
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 130/322 (40%), Gaps = 61/322 (18%)
Query: 50 GGDAYEPTRVPGLPSDVTS--VSAGHYHSLAVTNNGAVWAW-----GRNNEVQLGRGALE 102
GG P ++ + S ++ V AG+ H VT ++ W G QLG G
Sbjct: 353 GGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG--- 409
Query: 103 SRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDI-TEAI 161
+A++ PK VE L + + + D+G L+ +G G +G+ K E +
Sbjct: 410 DKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVL 469
Query: 162 VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNID 221
P ++ + +VS G H + T + +++ WG GR+G LDS D
Sbjct: 470 EPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLG----------LDSEED 519
Query: 222 RSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGR 281
+ ++ + I +V + CG D + +L +
Sbjct: 520 YYTPQKVDVPKALI------------------------------IVAVQCGCDGTFLLTQ 549
Query: 282 NGVLLSCGSNVYGQLGREKQDMGMFPVDINFH--PVSISSGLGHSLAICEVR------SS 333
+G +L+CG N + +LG + G+ + +H P + S L L+ ++R +
Sbjct: 550 SGKVLACGLNEFNKLGLNQCMSGIINHEA-YHEVPYTTSFTLAKQLSFYKIRTIAPGKTH 608
Query: 334 NVTGGARG-IVSWGWNRSSQLG 354
RG ++++G N+ QLG
Sbjct: 609 TAAIDERGRLLTFGCNKCGQLG 630
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 26/208 (12%)
Query: 10 NHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VT 67
NHV VLT V S+G G G LGL + D Y P +V +P +
Sbjct: 490 NHVVVLTR--------NKEVYSWGCGEYGRLGLDSE-----EDYYTPQKV-DVPKALIIV 535
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLG-----RGALESRATWNDPKRV-----EGLD 117
+V G + +T +G V A G N +LG G + A P + L
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595
Query: 118 QVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
+ ++AI + G L +G +K GQLG+G + L G+++++V
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRV 655
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRIG 205
S G +A T+D +F WG +GR+
Sbjct: 656 SCGDEFTIAATDDNHIFAWGNGGNGRLA 683
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 21/198 (10%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
+ +FG G +G+ G + EP ++ S+ V VS G H + +T N V++
Sbjct: 447 LYAFGSDYYGCMGVDKV---AGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYS 503
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG + GR L+S + P++V+ + + A + + G + G ++
Sbjct: 504 WGCG---EYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNE 560
Query: 148 RGQLGLGKDITEAI-------VP-----SRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
+LGL + ++ I VP + + L+ KI ++ G H A E G+L
Sbjct: 561 FNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLT 620
Query: 196 WGYSADGR--IGNLGKAL 211
+G + G+ +GN K L
Sbjct: 621 FGCNKCGQLGVGNYKKRL 638
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 130/322 (40%), Gaps = 61/322 (18%)
Query: 50 GGDAYEPTRVPGLPSDVTS--VSAGHYHSLAVTNNGAVWAW-----GRNNEVQLGRGALE 102
GG P ++ + S ++ V AG+ H VT ++ W G QLG G
Sbjct: 353 GGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG--- 409
Query: 103 SRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGK-DITEAI 161
+A++ PK VE L + + + D+G L+ +G G +G+ K E +
Sbjct: 410 DKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVL 469
Query: 162 VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNID 221
P ++ + +VS G H + T + +++ WG GR+G LDS D
Sbjct: 470 EPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLG----------LDSEED 519
Query: 222 RSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGR 281
+ ++ + I +V + CG D + +L +
Sbjct: 520 YYTPQRVDVPKALI------------------------------IVAVQCGCDGTFLLTQ 549
Query: 282 NGVLLSCGSNVYGQLGREKQDMGMFPVDINFH--PVSISSGLGHSLAICEVR------SS 333
+G +L+CG N + +LG + G+ + +H P + S L L+ ++R +
Sbjct: 550 SGKVLACGLNEFNKLGLNQCMSGIINHEA-YHEVPYTTSFTLAKQLSFYKIRTIAPGKTH 608
Query: 334 NVTGGARG-IVSWGWNRSSQLG 354
RG ++++G N+ QLG
Sbjct: 609 TAAIDERGRLLTFGCNKCGQLG 630
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 26/208 (12%)
Query: 10 NHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD--VT 67
NHV VLT V S+G G G LGL + D Y P RV +P +
Sbjct: 490 NHVVVLTR--------NKEVYSWGCGEYGRLGLDSE-----EDYYTPQRV-DVPKALIIV 535
Query: 68 SVSAGHYHSLAVTNNGAVWAWGRNNEVQLG-----RGALESRATWNDPKRV-----EGLD 117
+V G + +T +G V A G N +LG G + A P + L
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595
Query: 118 QVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKV 177
+ ++AI + G L +G +K GQLG+G + L G+++++V
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRV 655
Query: 178 SFGWGHALAQTEDGKLFGWGYSADGRIG 205
S G +A T+D +F WG +GR+
Sbjct: 656 SCGDEFTIAATDDNHIFAWGNGGNGRLA 683
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 21/198 (10%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD-VTSVSAGHYHSLAVTNNGAVWA 87
+ +FG G +G+ G + EP ++ S+ V VS G H + +T N V++
Sbjct: 447 LYAFGSDYYGCMGVDKV---SGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYS 503
Query: 88 WGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
WG + GR L+S + P+RV+ + + A + + G + G ++
Sbjct: 504 WGCG---EYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNE 560
Query: 148 RGQLGLGKDITEAI-------VP-----SRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
+LGL + ++ I VP + + L+ KI ++ G H A E G+L
Sbjct: 561 FNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLT 620
Query: 196 WGYSADGR--IGNLGKAL 211
+G + G+ +GN K L
Sbjct: 621 FGCNKCGQLGVGNYKKRL 638
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 122/322 (37%), Gaps = 52/322 (16%)
Query: 11 HVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVS 70
H VLT R V S G+ S G G + +++ R+ V V+
Sbjct: 185 HSLVLTDR--------EGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVA 236
Query: 71 AGHYHSLAVTNNGAVWA--WGRNNEVQLGRGALESRATWNDPKRVEG-LDQVNVCAAFAS 127
G HSL +T+ G V++ WG + + LG + S P ++ G L VNV
Sbjct: 237 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITS-----SPTKLGGDLAGVNVIQVATY 291
Query: 128 GVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQ 187
G A+ DG L+ WG S+ QL D T+ VP + K+ + + G
Sbjct: 292 GDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGGTGCAVL 351
Query: 188 TEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGME 247
+G +F WGY G+ NL ++ + + +E + EI
Sbjct: 352 NGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEI----------------- 394
Query: 248 KEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP 307
+V I CG H L G L G N+ G LG + + FP
Sbjct: 395 -----------------QVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFP 437
Query: 308 --VDINFHPVSISSGLGHSLAI 327
V + PV ++ G+ H + +
Sbjct: 438 WRVTMPGEPVDVACGVDHMVTL 459
Score = 38.5 bits (88), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 98/259 (37%), Gaps = 79/259 (30%)
Query: 140 LWVWGKSKRGQLGLGKDITEA----------------IVPSRVEALAGEKIVKVSFGWGH 183
++VWG S G LG+ + + VP R+E +KI + G+G
Sbjct: 61 VFVWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYRLEL--DQKISSAACGYGF 118
Query: 184 AL--AQTED-GKLFGWGYSADGRIG----------NLGKALESSPLDSNIDRSSESDQEI 230
L ++T D K++G G + D ++G LE SP+ +DR E+
Sbjct: 119 TLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLPLDRPQET---- 174
Query: 231 SSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGS 290
V+ ++CG HSLVL + S G+
Sbjct: 175 ----------------------------------RVLQVSCGRAHSLVLTDREGVFSMGN 200
Query: 291 NVYGQLGREKQDMGMFP--------VDINFHPVSISSGLGHSLAICEVRSSNVTG-GARG 341
N YGQ GR+ + ++ D + V ++ G HSL + + G GA G
Sbjct: 201 NSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADG 260
Query: 342 IVSWG-WNRSSQLGRMGPD 359
G +N +S ++G D
Sbjct: 261 QTGLGHYNITSSPTKLGGD 279
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 97/181 (53%), Gaps = 12/181 (6%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V++ G G G LGL S+ + +P VP L DV AG H++ ++ +G V+++
Sbjct: 37 VLTLGQGDVGQLGLGESVL----ERKKPALVP-LLQDVVQAEAGGMHTVCLSQSGQVYSF 91
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG--KS 146
G N+E LGR + P +VE ++V +A S ++A+ +DG +++WG +
Sbjct: 92 GCNDEGALGRDT-SVEGSEMVPGKVELQEKVVQVSAGDSH--TAALTEDGRVFLWGSFRD 148
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
G +GL + + +++VP +V+ A +VKV+ G H + T DG L+ G G++G
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQLDA--PVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGR 206
Query: 207 L 207
+
Sbjct: 207 V 207
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 90/228 (39%), Gaps = 52/228 (22%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
H T G V G+ + QLG G ES P V L +V A A G+ + +
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLG--ESVLERKKPALVPLLQ--DVVQAEAGGMHTVCL 82
Query: 135 GDDGSLWVWGKSKRGQLGLGKDIT-EAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKL 193
G ++ +G + G LG + +VP +VE EK+V+VS G H A TEDG++
Sbjct: 83 SQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKVVQVSAGDSHTAALTEDGRV 140
Query: 194 FGWGYSAD--GRIGNLGKALESS-PLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEK 250
F WG D G IG L +S P+ +D
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKKSMVPVQVQLD----------------------------- 171
Query: 251 YMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
VV +A G DH ++L +G L + G GQLGR
Sbjct: 172 -------------APVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGR 206
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 155/366 (42%), Gaps = 53/366 (14%)
Query: 3 LLKSVVHNHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGL 62
LL+ VV + + +S V SFG +GALG TS V G P +V L
Sbjct: 65 LLQDVVQAEAGGMHTVCLSQSGQ---VYSFGCNDEGALGRDTS---VEGSEMVPGKVE-L 117
Query: 63 PSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC 122
V VSAG H+ A+T +G V+ WG + G LE P +V+ LD V
Sbjct: 118 QEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDAPVVK 176
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLG--------------LGKDITEAIVPSRVEA 168
A + + + +DG L+ G ++GQLG LG+ + V +
Sbjct: 177 VASGNDHLV-MLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRG 235
Query: 169 LAGEKIVKVSF-GWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLD-SNIDRSSES 226
G + +F G A + +G ++G+G S ++G G P + ++ S++S
Sbjct: 236 TRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKS 295
Query: 227 --------------DQEISSSTIEKAQ--KL-VSEGMEKEKYMPIIWEPFLVEGVEVVDI 269
D E + ++ +A+ +L + EG E EK +P + V V +
Sbjct: 296 WVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAE-EKSIPTLISRLPV----VSSV 350
Query: 270 ACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI------NFHPVSISSGLGH 323
ACG + ++G + + G QLG + + PV++ N +++SSG H
Sbjct: 351 ACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQH 410
Query: 324 SLAICE 329
++ + +
Sbjct: 411 TVLLVK 416
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTS---VSAGHYHSLAVTNNGAV 85
V FG + LG P + G + P + + S S G +H++ + + G
Sbjct: 261 VYGFGLSNYHQLGTPGT-----GSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKA 315
Query: 86 WAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGK 145
++ GR +LG G E + P + L V+ A AS V A+ DG ++ WG
Sbjct: 316 YSLGRAEYGRLGLG--EGAEEKSIPTLISRLPVVSSVACGAS--VGYAVSKDGRVFAWGM 371
Query: 146 SKRGQLGLGKDITEAIVPSRV--EALAGEKIVKVSFGWGHALAQTED 190
QLG G+D +A P + + L ++ VS G H + +D
Sbjct: 372 GTNYQLGTGQD-EDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 129/298 (43%), Gaps = 36/298 (12%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V++ G G G LGL ++ + +P V +P DV AG H++ ++ +G V+++
Sbjct: 37 VLTLGQGDVGQLGLGENVM----ERKKPALV-SIPEDVVQAEAGGMHTVCLSKSGQVYSF 91
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG--KS 146
G N+E LGR + P +VE ++V +A S ++A+ DDG +++WG +
Sbjct: 92 GCNDEGALGRDT-SVEGSEMVPGKVELQEKVVQVSAGDSH--TAALTDDGRVFLWGSFRD 148
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
G +GL + + +++VP +V+ +VKV+ G H + T DG L+ G G++G
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQLDV--PVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGR 206
Query: 207 LGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEV 266
+ + + ++R + K L S G V
Sbjct: 207 VPELFANRGGRQGLER----------LLVPKCVMLKSRGSRGH--------------VRF 242
Query: 267 VDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGHS 324
D CG + + G + G + Y QLG + P ++ S S +G S
Sbjct: 243 QDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFS 300
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 18 RIFMRSASGTAVVSFGDGSQGALG-LPTSLTGVGG-DAYEPTRVPGLPSDVTSVSAGH-- 73
+ M +A G + + G G QG LG +P GG E VP + S GH
Sbjct: 183 HLVMLTADGD-LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVR 241
Query: 74 --------YHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGL-DQVNVCAA 124
Y + A+++ G V+ +G +N QLG ES P+ + +
Sbjct: 242 FQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFI---PQNLTSFKNSTKSWVG 298
Query: 125 FASGVVSSAIGD-DGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGH 183
F+ G + D +G + G+++ G+LGLG+ E +P+ + L + V+ G
Sbjct: 299 FSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPA--VSSVACGASV 356
Query: 184 ALAQTEDGKLFGWGYSADGRIGN 206
A T+DG++F WG + ++G
Sbjct: 357 GYAVTKDGRVFAWGMGTNYQLGT 379
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 143/343 (41%), Gaps = 56/343 (16%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V SFG +GALG TS V G P +V L V VSAG H+ A+T++G V+ W
Sbjct: 88 VYSFGCNDEGALGRDTS---VEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLW 143
Query: 89 GRNNEVQLGRGALESRATWNDPKRVE-GLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
G + G LE P +V+ + V V + V+ +A DG L+ G +
Sbjct: 144 GSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTA---DGDLYTLGCGE 200
Query: 148 RGQLGLGKDI----------TEAIVPSRVEALAGEKIVKVSF-----GWGHALAQTEDGK 192
+GQLG ++ +VP V + V F G A + +G
Sbjct: 201 QGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGH 260
Query: 193 LFGWGYSADGRIGNLGKALESSPLDSNIDRSSES-----------------DQEISSSTI 235
++G+G S ++G G ES + N+ S D E + ++
Sbjct: 261 VYGFGLSNYHQLGTPGT--ESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSL 318
Query: 236 EKAQ--KL-VSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNV 292
+A+ +L + EG E EK +P + V +ACG + ++G + + G
Sbjct: 319 GRAEYGRLGLGEGAE-EKSIPTLISRLPA----VSSVACGASVGYAVTKDGRVFAWGMGT 373
Query: 293 YGQLGREKQDMGMFPVDI------NFHPVSISSGLGHSLAICE 329
QLG + + PV++ N +S+SSG H++ + +
Sbjct: 374 NYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVK 416
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 29/183 (15%)
Query: 136 DDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFG 195
+ G + G+ GQLGLG+++ E P+ V E +V+ G H + ++ G+++
Sbjct: 33 EPGLVLTLGQGDVGQLGLGENVMERKKPALVS--IPEDVVQAEAGGMHTVCLSKSGQVYS 90
Query: 196 WGYSADGRIGNLGKALESS-------PLDSNIDRSSESDQEISSSTIEKAQKL------- 241
+G + +G +G ++E S L + + S D ++ T + L
Sbjct: 91 FGCNDEGALGR-DTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDN 149
Query: 242 -----VSEGMEKEKYMPIIWEPFLVE-GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQ 295
+ E M+K P V+ V VV +A G DH ++L +G L + G GQ
Sbjct: 150 NGVIGLLEPMKKSMV------PVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQ 203
Query: 296 LGR 298
LGR
Sbjct: 204 LGR 206
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 79/194 (40%), Gaps = 27/194 (13%)
Query: 19 IFMRSASGTAVVSFGDGSQGA-----LGLPTSLTGVGGDAYEPTRVPG-----LPSDVTS 68
+ ++S V F D GA + + G G Y PG +P ++TS
Sbjct: 229 VMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTS 288
Query: 69 V----------SAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQ 118
S G +H++ + + G ++ GR +LG G E + P + L
Sbjct: 289 FKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLG--EGAEEKSIPTLISRLPA 346
Query: 119 VNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV--EALAGEKIVK 176
V+ A AS V A+ DG ++ WG QLG G+D +A P + + L ++
Sbjct: 347 VSSVACGAS--VGYAVTKDGRVFAWGMGTNYQLGTGQD-EDAWSPVEMMGKQLENRVVLS 403
Query: 177 VSFGWGHALAQTED 190
VS G H + +D
Sbjct: 404 VSSGGQHTVLLVKD 417
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 125/324 (38%), Gaps = 52/324 (16%)
Query: 11 HVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVS 70
H VLT R V S G+ S G G V ++++ R+ V V
Sbjct: 182 HSLVLTDR--------EGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVV 233
Query: 71 AGHYHSLAVTNNGAVWA--WGRNNEVQLGRGALESRATWNDPKRVEG-LDQVNVCAAFAS 127
G HSL +T+ G V++ WG + + LG + S P ++ G L V V
Sbjct: 234 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITS-----TPSKLGGDLAGVTVVQVATY 288
Query: 128 GVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQ 187
G A+ DG ++ WG S+ QL D T+ VP + K+ +V+ G
Sbjct: 289 GDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAVL 348
Query: 188 TEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGME 247
+G +F WGY G +G K LE+ + E+ T+ + E
Sbjct: 349 NAEGHVFVWGY---GILGKGPKLLET------------AIPEMIPPTLFGLTEFNPE--- 390
Query: 248 KEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFP 307
V+V I CG H L G L G N+ G LG + + FP
Sbjct: 391 ----------------VQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFP 434
Query: 308 --VDINFHPVSISSGLGHSLAICE 329
V + PV ++ G+ H + + +
Sbjct: 435 WRVTMPGEPVDVACGVDHMVTLAK 458
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 75/201 (37%), Gaps = 50/201 (24%)
Query: 110 PKRVEGLDQVNVCAAFASG--VVSSAIGDDGSLWVWGKSKRGQLGLG---KDITEAI--- 161
P R+E LD AA G ++SS D +W G +K QLG KD T
Sbjct: 97 PYRLE-LDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYV 155
Query: 162 -----VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPL 216
VP ++ K+++VS G H+L T+ +F G ++ G+ G
Sbjct: 156 LEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGR---------- 205
Query: 217 DSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHS 276
+ E + S + + Q + VV + CG DHS
Sbjct: 206 -----KVVEDEVYSESHKVHRMQDFDGQ---------------------VVQVVCGQDHS 239
Query: 277 LVLGRNGVLLSCGSNVYGQLG 297
L L G + SCG GQ G
Sbjct: 240 LFLTDKGEVYSCGWGADGQTG 260
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 72/189 (38%), Gaps = 69/189 (36%)
Query: 140 LWVWGKSKRGQLGLGKDITEA----------------IVPSRVEALAGEKIVKVSFGWGH 183
++VWG S G LG+ + + VP R+E KI + G+G
Sbjct: 58 VFVWGFSFSGALGVPSFVVPSSGPGPRAGLRPRRRIQPVPYRLEL--DHKISSAACGYGF 115
Query: 184 AL--AQTED-GKLFGWGYSADGRIG----------NLGKALESSPLDSNIDRSSESDQEI 230
L ++T+D K++G G + D ++G LE SP+ +DR E+
Sbjct: 116 TLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQET---- 171
Query: 231 SSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGS 290
+V+ ++CG HSLVL + S G+
Sbjct: 172 ----------------------------------KVLQVSCGRAHSLVLTDREGVFSMGN 197
Query: 291 NVYGQLGRE 299
N +GQ GR+
Sbjct: 198 NSHGQCGRK 206
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 157/401 (39%), Gaps = 89/401 (22%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSD---VTSVSAGHYHSLAVTNNGAV 85
+ +G GS LGL + P P LP D + S + G H+LA+ V
Sbjct: 48 IFCWGTGSMCELGL--GPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNV 105
Query: 86 WAWGRNNEVQLGRGALESRATWND-----------------------------PKRVEGL 116
W+WG N+ LGR ++ D P EG
Sbjct: 106 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGH 165
Query: 117 DQVNVCAAFASGVVSSAIGDDGSLWVWG--KSKRGQLGLGKD-ITEAIVPSRVEALAGEK 173
V + A + +S A+ +G ++ WG + G LG +D I P +V +
Sbjct: 166 KVVQLAA---TDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYN 222
Query: 174 IVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLDSNIDR-------SSES 226
IV+++ G H L E+G +F WG ++G K +E L + R +
Sbjct: 223 IVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGR--KVMERFRLKTLDPRPFGLRHVKYIA 280
Query: 227 DQEISSSTIEKAQKLVSEGM---------EKEKYMPIIWEP---FLVEGVEVVDIACGFD 274
E + K KLVS G+ E + ++ +P L + V + IA G
Sbjct: 281 SGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEH 340
Query: 275 HSLVLGRNGVLLSCGSNVYGQLGREKQDMGMF--------------PVDINFHP--VSIS 318
HSL+L ++G L SCG ++G K ++ + P +N P S++
Sbjct: 341 HSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVA 400
Query: 319 SGLGHSLAICEVRSSNVTGGARGIV-SWGWNRSSQLGRMGP 358
+G HS+A+ + GI SWG+ + +G +GP
Sbjct: 401 AGSHHSVAVAQ----------NGIAYSWGFGETYAVG-LGP 430
Score = 38.1 bits (87), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 29/188 (15%)
Query: 1 MRLLKSVV--HNHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTR 58
+R +K + NH LT +VS+G G G+ + G +P R
Sbjct: 273 LRHVKYIASGENHCFALTK--------DNKLVSWGLNQFGQCGVSEDVED-GALVTKPKR 323
Query: 59 VPGLPSDVT--SVSAGHYHSLAVTNNGAVWAWGRNN--EVQLGRGALESRATWND----- 109
+ LP +V S++AG +HSL ++ +G +++ GR + EV + + L T+ D
Sbjct: 324 L-ALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNL-PEYTYKDVHGKA 381
Query: 110 -----PKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPS 164
P ++ + + AA + V A+ +G + WG + +GLG + VP+
Sbjct: 382 RAVPLPTKLNNVPKFKSVAAGSHHSV--AVAQNGIAYSWGFGETYAVGLGPFEDDTEVPT 439
Query: 165 RVEALAGE 172
R++ A +
Sbjct: 440 RIKNTATQ 447
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 12/181 (6%)
Query: 29 VVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAW 88
V++ G G G LGL S+ + +P VP L DV AG H++ + +G V+++
Sbjct: 37 VLTLGQGDVGQLGLGESVL----ERKKPALVP-LLQDVVQAEAGGMHTVCLNQSGQVYSF 91
Query: 89 GRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG--KS 146
G N+E LGR + P +VE ++V +A S ++A+ +DG +++WG +
Sbjct: 92 GCNDEGALGRDT-SVEGSEMVPGKVELQEKVVQVSAGDSH--TAALTEDGRVFLWGSFRD 148
Query: 147 KRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
G +GL + + +++VP +V+ +VKV+ G H + T DG L+ G G++G
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ--LDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGR 206
Query: 207 L 207
+
Sbjct: 207 V 207
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 92/228 (40%), Gaps = 52/228 (22%)
Query: 75 HSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAI 134
H T G V G+ + QLG G ES P V L +V A A G+ + +
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLG--ESVLERKKPALVPLLQ--DVVQAEAGGMHTVCL 82
Query: 135 GDDGSLWVWGKSKRGQLGLGKDIT-EAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKL 193
G ++ +G + G LG + +VP +VE EK+V+VS G H A TEDG++
Sbjct: 83 NQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQ--EKVVQVSAGDSHTAALTEDGRV 140
Query: 194 FGWGYSAD--GRIGNLGKALESS-PLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEK 250
F WG D G IG L +S P+ +D
Sbjct: 141 FLWGSFRDNNGVIGLLEPMKKSMVPVQVQLD----------------------------- 171
Query: 251 YMPIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
MP VV +A G DH ++L +G L + G GQLGR
Sbjct: 172 -MP------------VVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGR 206
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 155/366 (42%), Gaps = 53/366 (14%)
Query: 3 LLKSVVHNHVNVLTSRIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGL 62
LL+ VV + + +S V SFG +GALG TS V G P +V L
Sbjct: 65 LLQDVVQAEAGGMHTVCLNQSGQ---VYSFGCNDEGALGRDTS---VEGSEMVPGKVE-L 117
Query: 63 PSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC 122
V VSAG H+ A+T +G V+ WG + G LE P +V+ LD V
Sbjct: 118 QEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDMPVVK 176
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDI----------TEAIVPSRVEALAGE 172
A + + + DG L+ G ++GQLG ++ +VP V +
Sbjct: 177 VASGNDHLV-MLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRG 235
Query: 173 KIVKVSF-----GWGHALAQTEDGKLFGWGYSADGRIGNLGKALESSPLD-SNIDRSSES 226
+V F G A + +G ++G+G S ++G G A P + ++ S++S
Sbjct: 236 SRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKS 295
Query: 227 --------------DQEISSSTIEKAQ--KL-VSEGMEKEKYMPIIWEPFLVEGVEVVDI 269
D E + ++ +A+ +L + EG E EK +P + V V +
Sbjct: 296 WVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAE-EKSIPTLISRLPV----VSSV 350
Query: 270 ACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI------NFHPVSISSGLGH 323
ACG + ++G + + G QLG + + PV++ N +++SSG H
Sbjct: 351 ACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQH 410
Query: 324 SLAICE 329
++ + +
Sbjct: 411 TVLLVK 416
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 28/190 (14%)
Query: 18 RIFMRSASGTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPG-----LPSDVTSV--- 69
R+ + A A ++F +G + G G Y PG +P ++TS
Sbjct: 239 RVRFQDAFCGAYLTFAISREG------HVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNS 292
Query: 70 -------SAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVC 122
S G +H++ + + G ++ GR +LG G E + P + L V+
Sbjct: 293 TKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLG--EGAEEKSIPTLISRLPVVSSV 350
Query: 123 AAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKDITEAIVPSRV--EALAGEKIVKVSFG 180
A AS V A+ DG ++ WG QLG G+D +A P + + L ++ VS G
Sbjct: 351 ACGAS--VGYAVSKDGRVFAWGMGTNYQLGTGQD-EDAWSPVEMTGKQLENRVVLTVSSG 407
Query: 181 WGHALAQTED 190
H + +D
Sbjct: 408 GQHTVLLVKD 417
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG + GQLG G + + P +EAL G ++ KV+ G H++ +E G ++ WG
Sbjct: 180 GQVFSWGAGRHGQLGHGT-LEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWG 238
Query: 198 YSADGRIGNLGKALESSPLDSNIDRSSESDQ--EISSSTIEKAQKLVSEGMEKEKYMPII 255
++ G++ + P S + +E ++ E++ + K + V++ ++ I
Sbjct: 239 WNESGQL--------ALPTRSGTENKAEREEATELNEDGL-KEELAVADAGAPAHFIAIQ 289
Query: 256 WEPFLVE---GVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINF 312
P L++ G + V +CG H+ V+ R G L + G YGQLG + P + +
Sbjct: 290 PFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEY 349
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 90/222 (40%), Gaps = 45/222 (20%)
Query: 66 VTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAF 125
V + G H L + G V++WG QLG G LE+ +P+ +E L + +
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAEL---EPRLLEALQGLRMAKVA 219
Query: 126 ASGVVSSAIGDDGSLWVWGKSKRGQLGLG-----------KDITE--------------- 159
A G S + + G +++WG ++ GQL L ++ TE
Sbjct: 220 AGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADA 279
Query: 160 -------AI--VPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGNLGKA 210
AI P+ ++ G V S G H T G+L+ WG+ G+ G LG
Sbjct: 280 GAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGW---GKYGQLGHK 336
Query: 211 LESSPLD--SNIDRSSESDQEISSSTIEKAQKLVSEGMEKEK 250
+S+ LD ++ E E+ + T V ME++K
Sbjct: 337 -DSTSLDRPCCVEYFVERQLEVRAVTCGPWNTYVY-AMERDK 376
Score = 35.4 bits (80), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 17/115 (14%)
Query: 253 PIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN- 311
P +P E + V + G +H L+L G + S G+ +GQLG + + P +
Sbjct: 151 PPFCQPLAPE-LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEA 209
Query: 312 ---FHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQLG---RMGPDN 360
+++G HS+ + E TG I WGWN S QL R G +N
Sbjct: 210 LQGLRMAKVAAGGWHSVCLSE------TGD---IYIWGWNESGQLALPTRSGTEN 255
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 133/301 (44%), Gaps = 37/301 (12%)
Query: 26 GTAVVSFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAV 85
G V++ G G G LGL + + +P V L D+ +AG H++ + +G++
Sbjct: 40 GGQVLTLGQGDVGQLGLGEDIM----ERKKPALVT-LTEDIVQAAAGGMHTVCLGASGSI 94
Query: 86 WAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWG- 144
+ +G N+E LGR E + P +VE ++V +A S ++A+ +DG ++V+G
Sbjct: 95 YTFGCNDEGALGRDTSE-EGSEMQPGKVELAEKVVQVSAGDSH--TAALTEDGRVFVFGS 151
Query: 145 -KSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGR 203
+ G +GL + + +++VP +V+ ++K++ G H + T DG L+ G G+
Sbjct: 152 FRDNNGVIGLLEPMKKSMVPVQVQ--INTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQ 209
Query: 204 IGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIWEPFLVEG 263
+G + + + ++R + + L ++G +
Sbjct: 210 LGRVPERFTNRGGRKGLER----------LLVPQCIHLKAKGSGR--------------- 244
Query: 264 VEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDINFHPVSISSGLGH 323
V D+ CG + + + G + G + Y QLG + P ++ S S +G
Sbjct: 245 VHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGF 304
Query: 324 S 324
S
Sbjct: 305 S 305
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 94/224 (41%), Gaps = 54/224 (24%)
Query: 80 TNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVSSAIGDDGS 139
T G V G+ + QLG G E P V + ++ A A G+ + +G GS
Sbjct: 38 TVGGQVLTLGQGDVGQLGLG--EDIMERKKPALVTLTE--DIVQAAAGGMHTVCLGASGS 93
Query: 140 LWVWGKSKRGQLGLGKDITEA---IVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGW 196
++ +G + G LG+D +E + P +VE EK+V+VS G H A TEDG++F +
Sbjct: 94 IYTFGCNDEG--ALGRDTSEEGSEMQPGKVEL--AEKVVQVSAGDSHTAALTEDGRVFVF 149
Query: 197 GYSAD--GRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPI 254
G D G IG L P+ K+ +P+
Sbjct: 150 GSFRDNNGVIGLL------EPM-------------------------------KKSMVPV 172
Query: 255 IWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGR 298
+ V+ IA G DH ++L +G L + G GQLGR
Sbjct: 173 QVQI----NTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGR 212
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 3 LLKSVVHNHVNVLTSRIFMRSASGTAVV--------SFGDGSQGALG-LPTSLTGVGG-D 52
+ KS+V V + T I + S + V+ + G G QG LG +P T GG
Sbjct: 165 MKKSMVPVQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRK 224
Query: 53 AYEPTRVPGLPS---------DVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALES 103
E VP V G Y + AV+ G V+ +G +N QL G +
Sbjct: 225 GLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQL--GTKNT 282
Query: 104 RATWNDPKRVEGLDQVNVCAAFASGVVSSAIGD-DGSLWVWGKSKRGQLGLGKDITEAIV 162
+A + + F+ G + D +G + G+++ G+LGLG++ E
Sbjct: 283 QACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSE 342
Query: 163 PSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
P+ + L KI V+ G + A + DG +F WG + ++G
Sbjct: 343 PTPIPDLP--KINSVASGASVSYAVSTDGCVFAWGMGTNLQLGT 384
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 53 AYEPTRVPGLPSDVTS---VSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWND 109
Y P + + S S G +H++ V + G ++ GR +LG G E+ ++
Sbjct: 285 CYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLG--ENAEEQSE 342
Query: 110 PKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKD 156
P + L ++N A+ AS VS A+ DG ++ WG QLG G++
Sbjct: 343 PTPIPDLPKINSVASGAS--VSYAVSTDGCVFAWGMGTNLQLGTGEE 387
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 31 SFGDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGR 90
S G G LGL + + EPT +P LP + SV++G S AV+ +G V+AWG
Sbjct: 322 SLGRAEYGRLGLGENAE----EQSEPTPIPDLPK-INSVASGASVSYAVSTDGCVFAWGM 376
Query: 91 NNEVQLGRGALESRATWNDPKRVEG 115
+QLG G E W+ P+++ G
Sbjct: 377 GTNLQLGTG--EEEDVWS-PEQMTG 398
Score = 35.4 bits (80), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 246 MEKEKYMPIIWEPFLVEGVE-VVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMG 304
ME++K P LV E +V A G H++ LG +G + + G N G LGR+ + G
Sbjct: 61 MERKK-------PALVTLTEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEG 113
Query: 305 --MFP--VDINFHPVSISSGLGHSLAICE 329
M P V++ V +S+G H+ A+ E
Sbjct: 114 SEMQPGKVELAEKVVQVSAGDSHTAALTE 142
Score = 35.0 bits (79), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 24/185 (12%)
Query: 55 EPTRVPGLP------SDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGR--------GA 100
EP + +P + V +++G+ H + +T +G ++ G + QLGR G
Sbjct: 163 EPMKKSMVPVQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGG 222
Query: 101 LESRATWNDPK----RVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSKRGQLGLGKD 156
+ P+ + +G +V+ F + A+ +G ++ +G S QLG K+
Sbjct: 223 RKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGT-KN 281
Query: 157 ITEAIVPSRVEALAGEKIVKVSF--GWGHALAQTEDGKLFGWGYSADGRIG---NLGKAL 211
P + + + F G H + +GK + G + GR+G N +
Sbjct: 282 TQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQS 341
Query: 212 ESSPL 216
E +P+
Sbjct: 342 EPTPI 346
>sp|O74881|BTB1_SCHPO BTB/POZ domain-containing protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=btb1 PE=1 SV=1
Length = 1347
Score = 60.5 bits (145), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 15/142 (10%)
Query: 33 GDGSQGALGLPTSLTGVGGDAYEPTRVPGLPSDVTSVSAGHYHSLAVTNNGAVWAWGRNN 92
G G+ G +G T + Y +PG+ V +S H HSLA+T G++++WG+N
Sbjct: 222 GIGAGGRIGFNTDVQ------YNFIPIPGIIHKVIQISVSHTHSLALTKFGSIYSWGKNG 275
Query: 93 EVQLGRGALESRATWND-----PKRVEGLDQVNVCAAFASGVVSSAIGDDGSLWVWGKSK 147
+LG E + +D P+R+ + A+G S D ++ WG +
Sbjct: 276 SGELGLSNDELKK--DDPIQITPRRISAFKDYQII-GMAAGKSYSVAWTDTDIYSWGLNN 332
Query: 148 RGQLGLGKDITEAIVPSRVEAL 169
GQLG+ I+ P RV L
Sbjct: 333 -GQLGISDHISVVSTPRRVAGL 353
Score = 37.0 bits (84), Expect = 0.26, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 126 ASGVVSSAIGDDGS--LWVWGKSKRGQLGLGKDITEAIVPSRVEALAG--EKIVKVSFGW 181
AS S + D+ S ++V G G++G D+ +P + G K++++S
Sbjct: 202 ASKFHSVVLTDEPSQNVYVCGIGAGGRIGFNTDVQYNFIP-----IPGIIHKVIQISVSH 256
Query: 182 GHALAQTEDGKLFGWGYSADGRIG 205
H+LA T+ G ++ WG + G +G
Sbjct: 257 THSLALTKFGSIYSWGKNGSGELG 280
Score = 32.0 bits (71), Expect = 8.1, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 265 EVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGM-FPVDINFHPVSISSGLGH 323
+V+ I+ HSL L + G + S G N G+LG ++ P+ I P IS+ +
Sbjct: 248 KVIQISVSHTHSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQIT--PRRISAFKDY 305
Query: 324 S-LAICEVRSSNVTGGARGIVSWGWNRSSQLG 354
+ + +S +V I SWG N + QLG
Sbjct: 306 QIIGMAAGKSYSVAWTDTDIYSWGLN-NGQLG 336
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG + GQLG G + + P +EAL G + +V+ G H++ +E G ++ WG
Sbjct: 177 GQVFSWGGGRHGQLGHGT-LEAELEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWG 235
Query: 198 YSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEG-MEKEKYMPIIW 256
++ G++ AL + N+ E+ ++ E ++ G +E P I
Sbjct: 236 WNESGQL-----ALPTR----NLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIA 286
Query: 257 -EPF-----LVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDI 310
+PF L G + V ++CG H+ V+ R G L + G YGQLG E +P +
Sbjct: 287 VQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRV 346
Query: 311 NF 312
+
Sbjct: 347 EY 348
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 40/172 (23%)
Query: 72 GHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVS 131
G H+L + G V++WG QLG G LE+ +P+ +E L + + A G S
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEL---EPRLLEALQGLTMAEVAAGGWHS 222
Query: 132 SAIGDDGSLWVWGKSKRGQL-------------------GLGKDITEAIVPSRVEALA-- 170
+ + G +++WG ++ GQL GL +D ++ RVE A
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPA 282
Query: 171 ----------------GEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
G VKVS G H T G+L+ WG+ G++G+
Sbjct: 283 PFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGH 334
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 14/105 (13%)
Query: 253 PIIWEPFLVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN- 311
P + P E + + G +H+L+L G + S G +GQLG + + P +
Sbjct: 148 PPFYRPLAPE-LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEA 206
Query: 312 ---FHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQL 353
+++G HS+ + E TG I WGWN S QL
Sbjct: 207 LQGLTMAEVAAGGWHSVCVSE------TG---DIYIWGWNESGQL 242
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 62 LPSDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
L SD VS G H+ VT G ++ WG QLG E + + P+RVE
Sbjct: 298 LGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGH---EDTTSLDWPRRVE 347
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 138 GSLWVWGKSKRGQLGLGKDITEAIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWG 197
G ++ WG + GQLG G + + P +EAL G + +V+ G H++ +E G ++ WG
Sbjct: 177 GQVFSWGGGRHGQLGHGT-LEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWG 235
Query: 198 YSADGRIGNLGKALESSPLDSNIDRSSESDQEISSSTIEKAQKLVSEGMEKEKYMPIIW- 256
++ G++ AL + L + + + E++ + +Q + G E P I
Sbjct: 236 WNESGQL-----ALPTRNLAEDGETVAREATELNE---DGSQVKRTGGAEDGAPAPFIAV 287
Query: 257 EPF-----LVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGRE 299
+PF L G + V +CG H+ V+ R G L + G YGQLG E
Sbjct: 288 QPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHE 335
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 40/172 (23%)
Query: 72 GHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVEGLDQVNVCAAFASGVVS 131
G H+L + G V++WG QLG G LE+ +P+ +E L + + A G S
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEL---EPRLLEALQGLVMAEVAAGGWHS 222
Query: 132 SAIGDDGSLWVWGKSKRGQLGL------------GKDITE-------------------- 159
+ + G +++WG ++ GQL L ++ TE
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPA 282
Query: 160 -----AIVPSRVEALAGEKIVKVSFGWGHALAQTEDGKLFGWGYSADGRIGN 206
P+ ++ G VK S G H T G+L+ WG+ G++G+
Sbjct: 283 PFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGH 334
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 16/103 (15%)
Query: 258 PF---LVEGVEVVDIACGFDHSLVLGRNGVLLSCGSNVYGQLGREKQDMGMFPVDIN--- 311
PF L + + G +H+L+L G + S G +GQLG + + P +
Sbjct: 149 PFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQ 208
Query: 312 -FHPVSISSGLGHSLAICEVRSSNVTGGARGIVSWGWNRSSQL 353
+++G HS+ + E TG I WGWN S QL
Sbjct: 209 GLVMAEVAAGGWHSVCVSE------TG---DIYIWGWNESGQL 242
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 64 SDVTSVSAGHYHSLAVTNNGAVWAWGRNNEVQLGRGALESRATWNDPKRVE 114
SD S G H+ VT G ++ WG QLG E + + P+RVE
Sbjct: 300 SDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGH---EDTTSLDRPRRVE 347
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,912,817
Number of Sequences: 539616
Number of extensions: 6184757
Number of successful extensions: 13785
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 12517
Number of HSP's gapped (non-prelim): 582
length of query: 372
length of database: 191,569,459
effective HSP length: 119
effective length of query: 253
effective length of database: 127,355,155
effective search space: 32220854215
effective search space used: 32220854215
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)