Query 042848
Match_columns 339
No_of_seqs 171 out of 1167
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 10:10:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042848.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042848hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03157 spermidine hydroxycin 100.0 1.9E-53 4.1E-58 415.0 29.4 287 14-339 1-293 (447)
2 PLN02663 hydroxycinnamoyl-CoA: 100.0 4.4E-52 9.5E-57 403.9 27.5 281 14-339 1-285 (431)
3 PLN02481 Omega-hydroxypalmitat 100.0 1.2E-51 2.6E-56 401.0 27.6 284 13-339 11-298 (436)
4 PF02458 Transferase: Transfer 100.0 5.8E-51 1.3E-55 396.3 22.0 281 14-339 1-287 (432)
5 PLN00140 alcohol acetyltransfe 100.0 6.1E-50 1.3E-54 389.6 26.2 277 14-339 1-283 (444)
6 PRK09294 acyltransferase PapA5 98.8 1.1E-06 2.3E-11 85.4 22.7 247 39-339 6-265 (416)
7 PF00668 Condensation: Condens 98.4 2E-05 4.3E-10 71.9 16.7 242 56-339 27-277 (301)
8 COG4908 Uncharacterized protei 98.3 6.8E-05 1.5E-09 70.3 17.7 249 46-339 18-277 (439)
9 TIGR02946 acyl_WS_DGAT acyltra 97.8 0.0012 2.5E-08 64.7 16.2 228 77-339 32-289 (446)
10 PF07247 AATase: Alcohol acety 97.7 0.0026 5.6E-08 63.0 17.3 62 268-339 248-312 (480)
11 PF03007 WES_acyltransf: Wax e 97.2 0.0018 3.9E-08 59.0 8.6 129 55-200 19-156 (263)
12 PRK12316 peptide synthase; Pro 97.0 0.054 1.2E-06 67.9 20.8 229 77-339 86-327 (5163)
13 PRK12467 peptide synthase; Pro 96.9 0.038 8.2E-07 67.8 18.5 223 76-339 85-327 (3956)
14 PRK10252 entF enterobactin syn 96.8 0.22 4.7E-06 55.4 22.7 222 76-339 43-282 (1296)
15 PRK12467 peptide synthase; Pro 96.7 0.14 3.1E-06 63.0 21.6 220 76-339 2681-2914(3956)
16 PRK12316 peptide synthase; Pro 96.3 0.28 6.1E-06 61.8 20.9 222 76-338 4137-4369(5163)
17 PRK05691 peptide synthase; Val 96.2 0.25 5.5E-06 61.5 19.1 224 76-339 3293-3536(4334)
18 PRK05691 peptide synthase; Val 96.1 0.37 8.1E-06 60.0 20.3 220 76-338 1764-2005(4334)
19 PRK13757 chloramphenicol acety 81.2 2.1 4.5E-05 37.8 4.0 44 157-201 167-213 (219)
20 PF00302 CAT: Chloramphenicol 74.2 3.7 8E-05 35.9 3.5 38 157-196 164-205 (206)
21 PRK11856 branched-chain alpha- 71.6 4.3 9.3E-05 39.4 3.7 29 173-201 375-403 (411)
22 PRK11855 dihydrolipoamide acet 65.9 6.2 0.00014 39.9 3.6 29 173-201 512-540 (547)
23 PF00198 2-oxoacid_dh: 2-oxoac 60.9 13 0.00028 33.1 4.3 30 172-201 195-224 (231)
24 PRK11854 aceF pyruvate dehydro 55.1 13 0.00028 38.4 3.7 29 173-201 598-626 (633)
25 PRK11857 dihydrolipoamide acet 53.1 15 0.00032 34.2 3.4 29 173-201 270-298 (306)
26 PLN02528 2-oxoisovalerate dehy 52.4 16 0.00034 35.6 3.6 29 173-201 378-406 (416)
27 TIGR01349 PDHac_trf_mito pyruv 52.2 15 0.00033 35.9 3.5 29 173-201 400-428 (435)
28 PRK14843 dihydrolipoamide acet 50.0 17 0.00038 34.4 3.4 29 173-201 312-340 (347)
29 PTZ00144 dihydrolipoamide succ 49.3 18 0.0004 35.2 3.5 30 172-201 380-409 (418)
30 COG4845 Chloramphenicol O-acet 48.7 24 0.00052 30.6 3.7 45 156-201 165-212 (219)
31 TIGR01347 sucB 2-oxoglutarate 48.3 21 0.00046 34.6 3.8 29 173-201 366-394 (403)
32 PRK05704 dihydrolipoamide succ 48.2 20 0.00044 34.8 3.6 29 173-201 370-398 (407)
33 PLN02226 2-oxoglutarate dehydr 44.5 23 0.00049 35.0 3.4 29 173-201 426-454 (463)
34 TIGR02927 SucB_Actino 2-oxoglu 43.3 24 0.00053 36.0 3.5 28 174-201 553-580 (590)
35 TIGR01348 PDHac_trf_long pyruv 42.9 26 0.00057 35.4 3.6 28 174-201 512-539 (546)
36 PLN02744 dihydrolipoyllysine-r 39.5 30 0.00064 34.9 3.3 29 173-201 504-532 (539)
37 KOG0558 Dihydrolipoamide trans 30.2 56 0.0012 30.8 3.3 29 173-201 436-464 (474)
38 KOG1212 Amidases [Translation, 27.1 54 0.0012 33.1 2.8 36 277-322 53-88 (560)
No 1
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional
Probab=100.00 E-value=1.9e-53 Score=415.04 Aligned_cols=287 Identities=23% Similarity=0.295 Sum_probs=223.6
Q ss_pred cceEEEEeEeecCCCCCchhhcccCccccCCcccccccccCcccEEEEEecCCCCCCcchhhHHHHHHHHHHHhhhhccc
Q 042848 14 RLVKIHEACKVPPFSDDSTAAAVAATTLPLTYFDTYCFNLSPVDILLFYEIKDLTWDSFNSEILPKLKHSLSITLLHYLP 93 (339)
Q Consensus 14 ~~V~v~~~~~V~P~~~~~~~~~~~~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~ 93 (339)
|-|+|+++++|+|+.||| .+.++||+|||...++ |++.+|||+.+. ... ..+++++||+||+++|++|||
T Consensus 1 ~~v~~~~~~~v~Ps~ptp------~~~~~LS~lD~~~~~~-~v~~v~fy~~~~-~~~--~~~~~~~Lk~sLs~~L~~fyp 70 (447)
T PLN03157 1 MVVILKASYTVKPAKPTW------TGRRSLSEWDQVGTIT-HVPTIYFYSPPW-NTS--SGSIIEILKDSLSRALVPFYP 70 (447)
T ss_pred CeEEEeccEEECCCCCCC------CCccCCChhhhccccc-cCCEEEEEeCCC-ccc--cccHHHHHHHHHHHHHhhccc
Confidence 579999999999999998 6789999999986654 999999998653 211 235689999999999999999
Q ss_pred cCcEEeCCCCCCCceEEeeCCCceEEEEEEeccchhhhhcCCCCCCccccccCCCCCCCCC--CCCCcEEEEEEEEecCC
Q 042848 94 VAGHLMWPPDAEKPAVYYFKDDGVSVTVAESNADLRRLLSSNNGTRRAVEFHPLAPRLSIS--EDKAEVTAIQITLFPNQ 171 (339)
Q Consensus 94 LaGrl~~~~~~g~~~i~~~~~~gv~f~~a~~d~~~~~l~~~~~~p~~~~~~~~l~p~~~~~--~~~~Pll~vQvt~f~~G 171 (339)
|||||+.+++ |+++|+|| ++||+|+||+++.+++|+.. .. +...+.+|+|..+.. ..+.|+++||||.|.||
T Consensus 71 lAGRl~~~~~-g~~~i~c~-~~Gv~fveA~~~~~l~~~~~--~~--~~~~~~~l~P~~~~~~~~~~~Pll~vQvT~F~cG 144 (447)
T PLN03157 71 LAGRLRWIGG-GRLELECN-AMGVLLIEAESEAKLDDFGD--FS--PTPEFEYLIPSVDYTKPIHELPLLLVQLTKFSCG 144 (447)
T ss_pred cCEEEEEcCC-CcEEEEEC-CCCeEEEEEEeCCcHHHhhc--cC--CCHHHHhhcCCCCcccccccCceEEEEEEEecCC
Confidence 9999998776 89999997 99999999999999999954 22 234566788876543 24679999999999999
Q ss_pred eEEEEEeeeccccchHHHHHHHHHHHHHHHhhhccCCcCCCCCCCCCCCCCccccccccC--CCC--CchHHHHHHhhhc
Q 042848 172 GFSICISVHHTVIDGKSAVLFIKSWAYLCKKLQQQNVVVPVPSLLPESLTPCFDRSLIKD--PHG--IDMVYVKQLMAFT 247 (339)
Q Consensus 172 G~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r~~~G~~~~~~~~~~l~~~~~P~~dr~~l~~--p~~--~~~~~~~~~~~~~ 247 (339)
|++||+++||.++||.|+.+|+++||++|| |.. ...+|++||+.+.. ++. ....+ .++...+
T Consensus 145 G~~lg~~~~H~v~Dg~~~~~fl~aWA~~~r---g~~----------~~~~P~~dR~~l~~~~~p~~~~~~~~-~~~~~~~ 210 (447)
T PLN03157 145 GISLGLGISHAVADGQSALHFISEWARIAR---GEP----------LGTVPFLDRKVLRAGEPPLSAPVFDH-AEFSHPP 210 (447)
T ss_pred CEEEEEEeeccccchHhHHHHHHHHHHHhc---CCC----------CCCCCccCcccccCCCCCCcCCccCh-hhcccCc
Confidence 999999999999999999999999999999 843 13468999998762 221 11111 1221100
Q ss_pred CCCCCCCCcccccCCCcCCCceEEEEEEeCHHHHHHHHHHhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCC
Q 042848 248 GSDPNTRSLKVTIPVAKVDSNLVRKTFTLTREDLNKLKHKLVLVNKDQHPSKQLHSSTFVLTCAHVFVCLVKARGEDANT 327 (339)
Q Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~~St~dal~A~iW~~i~rAr~~~~~~ 327 (339)
. . ..... +......++++++|+|++++|++||++|...... .+..++|+||+|+||+|+|++|||+..+++
T Consensus 211 ~-~-~~~~~----~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~~~~~---~~~~~~St~dalsA~lWr~~~rAr~~~~~~ 281 (447)
T PLN03157 211 L-L-IGEQD----NVEERKKKTTVAMLKLSKDQVEKLKDKANESRSS---DNGRPYTRYETVAGHVWRSACKARGHEPEQ 281 (447)
T ss_pred c-c-ccccc----cccccccCceEEEEEECHHHHHHHHHhCcccccc---cCCCCccHHHHHHHHHHHHHHHHccCCCCC
Confidence 0 0 00000 0001134678899999999999999999764321 023579999999999999999999887889
Q ss_pred eEEEEEeeccCC
Q 042848 328 TVTFWVPADCRS 339 (339)
Q Consensus 328 ~~~l~~avd~R~ 339 (339)
.+++.++||+|+
T Consensus 282 ~~~l~~~vd~R~ 293 (447)
T PLN03157 282 PTALGICVDSRS 293 (447)
T ss_pred ceEEEEEecCCC
Confidence 999999999995
No 2
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Probab=100.00 E-value=4.4e-52 Score=403.92 Aligned_cols=281 Identities=23% Similarity=0.358 Sum_probs=221.6
Q ss_pred cceEEEEeEeecCCCCCchhhcccCccccCCcccccccccCcccEEEEEecCCCCCCcchhhHHHHHHHHHHHhhhhccc
Q 042848 14 RLVKIHEACKVPPFSDDSTAAAVAATTLPLTYFDTYCFNLSPVDILLFYEIKDLTWDSFNSEILPKLKHSLSITLLHYLP 93 (339)
Q Consensus 14 ~~V~v~~~~~V~P~~~~~~~~~~~~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~ 93 (339)
|+|+|+++++|+|+.||| .++++||+||+.++++ |++.+|||+.+. ... + ...++||+||+++|++|||
T Consensus 1 ~~v~~~~~~~V~Ps~ptp------~~~~~LS~lD~~~~~~-~~~~v~fY~~~~-~~~-~--~~~~~Lk~sLs~~L~~~yp 69 (431)
T PLN02663 1 MIINVRESTMVRPAEETP------RRGLWNSNVDLVVPRF-HTPSVYFYRPTG-ASN-F--FDPQVMKEALSKALVPFYP 69 (431)
T ss_pred CeEEEcCcEEECCCCCCC------CCcccCChhhcccccc-cccEEEEEcCCC-CCC-c--cCHHHHHHHHHHHHhhccc
Confidence 689999999999999988 7899999999987765 899999999654 221 1 1358999999999999999
Q ss_pred cCcEEeCCCCCCCceEEeeCCCceEEEEEEeccchhhhhcCCCCCCccccccCCCCCCCCCC--CCCcEEEEEEEEecCC
Q 042848 94 VAGHLMWPPDAEKPAVYYFKDDGVSVTVAESNADLRRLLSSNNGTRRAVEFHPLAPRLSISE--DKAEVTAIQITLFPNQ 171 (339)
Q Consensus 94 LaGrl~~~~~~g~~~i~~~~~~gv~f~~a~~d~~~~~l~~~~~~p~~~~~~~~l~p~~~~~~--~~~Pll~vQvt~f~~G 171 (339)
|||||+.+++ |+++|+|+ ++||.|++|+++.+++++.. ..+ ...+++|+|..+... .+.|+++||||+|.||
T Consensus 70 laGRl~~~~~-g~~~i~c~-~~Gv~fv~A~~~~~l~~~~~--~~~--~~~~~~l~P~~~~~~~~~~~P~l~vQvt~F~cG 143 (431)
T PLN02663 70 MAGRLRRDED-GRIEIDCN-AEGVLFVEADTPSVIDDFGD--FAP--TLELRQLIPTVDYSGGISSYPLLVLQVTHFKCG 143 (431)
T ss_pred cceeeeECCC-CCEEEEEC-CCCceEEEEecCCCHHHhhc--cCC--CHHHHhhcCCCCCccccccCceEEEEEEEeccC
Confidence 9999999876 89999996 99999999999999999854 222 234556888754432 4689999999999999
Q ss_pred eEEEEEeeeccccchHHHHHHHHHHHHHHHhhhccCCcCCCCCCCCCCCCCcccccccc--CCCCCchHHHHHHhhhcCC
Q 042848 172 GFSICISVHHTVIDGKSAVLFIKSWAYLCKKLQQQNVVVPVPSLLPESLTPCFDRSLIK--DPHGIDMVYVKQLMAFTGS 249 (339)
Q Consensus 172 G~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r~~~G~~~~~~~~~~l~~~~~P~~dr~~l~--~p~~~~~~~~~~~~~~~~~ 249 (339)
|++||+++||.++||.|+.+|+++||++|| |.. . ...|++||+.+. +|+.....+. ++...
T Consensus 144 G~~lg~~~~H~v~Dg~g~~~fl~awa~~~r---g~~--------~--~~~p~~dr~~l~~~~p~~~~~~~~-~~~~~--- 206 (431)
T PLN02663 144 GVSLGVGMQHHAADGFSGLHFINTWSDMAR---GLD--------L--TIPPFIDRTLLRARDPPQPAFHHV-EYQPP--- 206 (431)
T ss_pred CEEEEEEecccccchHHHHHHHHHHHHHhc---CCC--------C--CCCCccCccccCCCCCCCCCcccc-cccCC---
Confidence 999999999999999999999999999999 843 1 346899998765 3433221111 11110
Q ss_pred CCCCCCcccccCCCcCCCceEEEEEEeCHHHHHHHHHHhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCeE
Q 042848 250 DPNTRSLKVTIPVAKVDSNLVRKTFTLTREDLNKLKHKLVLVNKDQHPSKQLHSSTFVLTCAHVFVCLVKARGEDANTTV 329 (339)
Q Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~~St~dal~A~iW~~i~rAr~~~~~~~~ 329 (339)
...... .......+.+.++|+|++++|++||+.+.+.. +..++|+||||+||+|+|++|||+..+++++
T Consensus 207 ----~~~~~~-~~~~~~~~~~~~~f~fs~~~i~~LK~~~~~~~------~~~~~S~~dalsA~lW~~~~rA~~~~~~~~~ 275 (431)
T PLN02663 207 ----PSMKTP-LETSKPENTTVSIFKLTRDQLNTLKAKSKEDG------NTISYSSYEMLAGHVWRSACKARGLPDDQET 275 (431)
T ss_pred ----Cccccc-cccCCCCCceEEEEEECHHHHHHHHhhCcccC------CCcccchHHHHHHHHHhhhhhcccCCCccce
Confidence 000000 00011346788999999999999999987432 2357999999999999999999988888999
Q ss_pred EEEEeeccCC
Q 042848 330 TFWVPADCRS 339 (339)
Q Consensus 330 ~l~~avd~R~ 339 (339)
++.++||+|+
T Consensus 276 ~~~~~vd~R~ 285 (431)
T PLN02663 276 KLYIATDGRS 285 (431)
T ss_pred EEEEEecCCc
Confidence 9999999995
No 3
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase
Probab=100.00 E-value=1.2e-51 Score=401.02 Aligned_cols=284 Identities=24% Similarity=0.308 Sum_probs=223.2
Q ss_pred CcceEEEEeEeecCCCCCchhhcccCccccCCcccccccccCcccEEEEEecCCCCCCcchhhHHHHHHHHHHHhhhhcc
Q 042848 13 NRLVKIHEACKVPPFSDDSTAAAVAATTLPLTYFDTYCFNLSPVDILLFYEIKDLTWDSFNSEILPKLKHSLSITLLHYL 92 (339)
Q Consensus 13 ~~~V~v~~~~~V~P~~~~~~~~~~~~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p 92 (339)
.+.|++.++++|+|+.||| .++++||+||+.+ . .|++.+|||+.++ ..+ .++++++||+||+++|++||
T Consensus 11 ~~~v~~~~~~~V~Ps~ptp------~~~~~LS~lD~~~-~-~~~~~~~fy~~~~-~~~--~~~~~~~Lk~sLs~~L~~~~ 79 (436)
T PLN02481 11 QLVVKQKEPELVPPAEETP------KGLYFLSNLDQNI-A-VIVRTVYCFKSEE-RGS--NEDPVDVIKKALSKVLVHYY 79 (436)
T ss_pred ceEEEEcCCEEeCCCCCCC------CCceecCccccCc-c-eeeeEEEEECCCC-ccc--ccCHHHHHHHHHHHHhcccc
Confidence 4789999999999999998 7899999999975 4 4899999999765 322 24579999999999999999
Q ss_pred ccCcEEeCCCCCCCceEEeeCCCceEEEEEEeccchhhhhcCCCCCCccccccCCCCCCCCC--CCCCcEEEEEEEEecC
Q 042848 93 PVAGHLMWPPDAEKPAVYYFKDDGVSVTVAESNADLRRLLSSNNGTRRAVEFHPLAPRLSIS--EDKAEVTAIQITLFPN 170 (339)
Q Consensus 93 ~LaGrl~~~~~~g~~~i~~~~~~gv~f~~a~~d~~~~~l~~~~~~p~~~~~~~~l~p~~~~~--~~~~Pll~vQvt~f~~ 170 (339)
||||||+.+++ |+++|+|+ ++||.|+++++|.+++++.. ...| +...+++|+|..+.. ....|++.+|||.|+|
T Consensus 80 plAGRL~~~~~-g~~~i~c~-~~Gv~fvea~~d~~l~~l~~-~~~p-~~~~~~~l~~~~~~~~~~~~~Pll~vQvT~F~~ 155 (436)
T PLN02481 80 PLAGRLTISSE-GKLIVDCT-GEGVVFVEAEANCSIEEIGD-ITKP-DPETLGKLVYDVPGAKNILEIPPLTAQVTRFKC 155 (436)
T ss_pred CCCCeeeeCCC-CcEEEEEc-CCCeEEEEEEecCcHHHhcc-ccCC-CCHHHHHhCCCCCCcccccccceeeeccceEec
Confidence 99999998876 89999996 89999999999999999843 1233 233456677765432 2358999999999999
Q ss_pred CeEEEEEeeeccccchHHHHHHHHHHHHHHHhhhccCCcCCCCCCCCCCCCCcccccccc--CCCCCchHHHHHHhhhcC
Q 042848 171 QGFSICISVHHTVIDGKSAVLFIKSWAYLCKKLQQQNVVVPVPSLLPESLTPCFDRSLIK--DPHGIDMVYVKQLMAFTG 248 (339)
Q Consensus 171 GG~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r~~~G~~~~~~~~~~l~~~~~P~~dr~~l~--~p~~~~~~~~~~~~~~~~ 248 (339)
||++||+++||.++||.|+.+|+++||++|| |.. ....|++||+.+. +|+.....+ .++....
T Consensus 156 GG~~lg~~~~H~v~Dg~g~~~fl~~WA~~~r---g~~----------~~~~p~~dr~~l~~~~pp~~~~~~-~~~~~~~- 220 (436)
T PLN02481 156 GGFVLGLCMNHCMFDGIGAMEFVNSWGETAR---GLP----------LSVPPFLDRSILRARNPPKIEFPH-QEFAEIE- 220 (436)
T ss_pred CcEEEEEEeccccccHHHHHHHHHHHHHHhc---CCC----------CCCCCCcCcccCCCCCCCCCCcCc-ccccccc-
Confidence 9999999999999999999999999999999 843 1347889998775 343322211 1121110
Q ss_pred CCCCCCCcccccCCCcCCCceEEEEEEeCHHHHHHHHHHhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCe
Q 042848 249 SDPNTRSLKVTIPVAKVDSNLVRKTFTLTREDLNKLKHKLVLVNKDQHPSKQLHSSTFVLTCAHVFVCLVKARGEDANTT 328 (339)
Q Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~~St~dal~A~iW~~i~rAr~~~~~~~ 328 (339)
..... .......++++++|+|++++|++||++|..+. ...++|+||+|+||+|+|++||++..+++.
T Consensus 221 ---~~~~~----~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~~~------~~~~~S~~dal~A~iW~~~~rA~~~~~~~~ 287 (436)
T PLN02481 221 ---DVSGT----SKLYDDEELVYKSFCFDPEKLEKLKSMALEDG------VIKKCSTFEALTAFVWRARTKALKMLPDQQ 287 (436)
T ss_pred ---CCccc----cccccccCceEEEEEECHHHHHHHHHhccccc------CCCCcChHHHHHHHHHHHHHhccCCCCCCe
Confidence 00000 00012346789999999999999999986432 135799999999999999999998878899
Q ss_pred EEEEEeeccCC
Q 042848 329 VTFWVPADCRS 339 (339)
Q Consensus 329 ~~l~~avd~R~ 339 (339)
+.+.++||+|+
T Consensus 288 ~~l~~~vd~R~ 298 (436)
T PLN02481 288 TKLLFAVDGRS 298 (436)
T ss_pred EEEEEEEcCcc
Confidence 99999999996
No 4
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis []. Deacetylvindoline 4-O-acetyltransferase (2.3.1.107 from EC) catalyzes the last step in vindoline biosynthesis is also a member of this family []. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 2BGH_B 2E1U_B 2E1T_A 2E1V_A 2XR7_A 3B30_A 2RKT_A 3B2S_A 2RKV_A 2ZBA_C ....
Probab=100.00 E-value=5.8e-51 Score=396.31 Aligned_cols=281 Identities=33% Similarity=0.487 Sum_probs=201.9
Q ss_pred cceEEEEeEeecCCCCCchhhcccCccccCCccc-ccccccCcccEEEEEecCCCCCCcchhhHHHHHHHHHHHhhhhcc
Q 042848 14 RLVKIHEACKVPPFSDDSTAAAVAATTLPLTYFD-TYCFNLSPVDILLFYEIKDLTWDSFNSEILPKLKHSLSITLLHYL 92 (339)
Q Consensus 14 ~~V~v~~~~~V~P~~~~~~~~~~~~~~~~LS~lD-~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p 92 (339)
|+|+|.++++|+|+.|+| .+.++||+|| +.+..+ |++.+|||+.+. +.. ...+++.||+||+++|++||
T Consensus 1 m~v~v~~~~~V~Ps~~tp------~~~~~LS~lD~~~~~~~-~~~~~~~y~~~~-~~~--~~~~~~~Lk~sLs~~L~~~~ 70 (432)
T PF02458_consen 1 MKVTVLSRSLVKPSSPTP------PHTLPLSNLDLQLMPPY-YVPVLLFYRPPS-SSD--DSDIVDNLKESLSKTLVHYY 70 (432)
T ss_dssp ---EEEEECEEE-STTS-------TCEEE--HHHHHCCGCS-EEEEEEEEE--S-SCH--HHHHHHHHHHHHHHHHTTSG
T ss_pred CCCEEecCEEEECCCCCC------CCcccCchhhcCccccc-EEEEEEEecCcc-ccc--cchHHHHHHHHHHHhHhhCc
Confidence 789999999999999998 5599999999 666554 899999999875 322 23469999999999999999
Q ss_pred ccCcEEeCCCCCCCceEEeeCCCceEEEEEEeccchhhhhcCCCCCCccccccCCCCCCCCC--CCCCcEEEEEEEEecC
Q 042848 93 PVAGHLMWPPDAEKPAVYYFKDDGVSVTVAESNADLRRLLSSNNGTRRAVEFHPLAPRLSIS--EDKAEVTAIQITLFPN 170 (339)
Q Consensus 93 ~LaGrl~~~~~~g~~~i~~~~~~gv~f~~a~~d~~~~~l~~~~~~p~~~~~~~~l~p~~~~~--~~~~Pll~vQvt~f~~ 170 (339)
|||||| .++ +|+++|+|| |+||+|++|+++.+++++.. .. .+......|+|..+.. ..+.|+++||||+|+|
T Consensus 71 ~lAGrl-~~~-~~~~~i~c~-d~Gv~f~~a~~~~~l~~~~~--~~-~~~~~~~~l~p~~~~~~~~~~~Pll~vQvt~f~~ 144 (432)
T PF02458_consen 71 PLAGRL-RDP-DGRLEIDCN-DDGVEFVEAEADGTLDDLLD--LE-PPSEFLRDLVPQLPVSSEGEDAPLLAVQVTRFKC 144 (432)
T ss_dssp GGGSEE-ESS-CTTTEEEEC-TTTEEEEEEEESS-HHHHCS--SS-CCGGGGGGGSSS-SSSEEETTEBSEEEEEEEETT
T ss_pred ccCcEE-ccc-ccceEEEEe-cCCCEEEEEecccceeeccc--cc-cchHHHHHHhhhcccCCcccccceeEeeeeeecc
Confidence 999999 666 599999996 99999999999999999966 33 2334456788865543 3458999999999999
Q ss_pred CeEEEEEeeeccccchHHHHHHHHHHHHHHHhhhccCCcCCCCCCCCCCCCCccccccccCCCCCchHHHHHHhhhcCCC
Q 042848 171 QGFSICISVHHTVIDGKSAVLFIKSWAYLCKKLQQQNVVVPVPSLLPESLTPCFDRSLIKDPHGIDMVYVKQLMAFTGSD 250 (339)
Q Consensus 171 GG~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r~~~G~~~~~~~~~~l~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~ 250 (339)
||++||+++||.++||.|+.+|+++||++|| |.. .....|.+||+.+..+. .+.. .+... .
T Consensus 145 GG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r---g~~---------~~~~~p~~~r~~~~~~~---~p~~-~~~~~---~ 205 (432)
T PF02458_consen 145 GGLALGVSFHHAVADGTGFSQFLKAWAEICR---GGS---------PPSPPPVFDRSLLLPPN---PPSV-SFPPS---E 205 (432)
T ss_dssp TEEEEEEEEETTT--HHHHHHHHHHHHHHHH---TTC---------HHHHHHCHSSTTSS-ST---THHH-GCTCS---C
T ss_pred cceeeeeeceeccCcccchhHHHHHHHhhhc---CCc---------ccccccccchHHhhhcc---Cccc-ccccc---c
Confidence 9999999999999999999999999999999 753 11235788988775431 0110 11100 0
Q ss_pred CCCCCcccccCCCcCCCceEEEEEEeC---HHHHHHHHHHhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCC
Q 042848 251 PNTRSLKVTIPVAKVDSNLVRKTFTLT---REDLNKLKHKLVLVNKDQHPSKQLHSSTFVLTCAHVFVCLVKARGEDANT 327 (339)
Q Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~f~fs---~~~l~~LK~~a~~~~~~~~~~~~~~~St~dal~A~iW~~i~rAr~~~~~~ 327 (339)
...... .......+...+.|.|+ .++|++||..+..... ....||||+|+||+|||++|||....++
T Consensus 206 ~~~~~~----~~~~~~~~~~~~~~~f~~~~~~~l~~lk~~~~~~~~------~~~~St~d~l~A~lWr~~~rar~~~~~~ 275 (432)
T PF02458_consen 206 FEPFPP----EPAPPSSKCVSKTFVFSKLSIEKLKKLKSEALSSSS------GKPVSTFDALTALLWRCITRARGLPSDE 275 (432)
T ss_dssp HTTC------TTS---SSEEEEEEEEEHHHHHHHHHHHHHHSTTTS------TT-S-HHHHHHHHHHHHHHHHHCHTTTT
T ss_pred cccccc----cccccccccccceeeecccHHHHHHHHhhccccccC------CCCCCeeEEEEEehhhhhcccccccccc
Confidence 000000 00113356778888888 6777777776665432 1223999999999999999999987777
Q ss_pred eEEEEEeeccCC
Q 042848 328 TVTFWVPADCRS 339 (339)
Q Consensus 328 ~~~l~~avd~R~ 339 (339)
.+++.++||+|+
T Consensus 276 ~~~l~~~vd~R~ 287 (432)
T PF02458_consen 276 TSRLSFAVDCRK 287 (432)
T ss_dssp CEEEEEEEETHH
T ss_pred ccccccccccCC
Confidence 899999999995
No 5
>PLN00140 alcohol acetyltransferase family protein; Provisional
Probab=100.00 E-value=6.1e-50 Score=389.59 Aligned_cols=277 Identities=18% Similarity=0.240 Sum_probs=211.7
Q ss_pred cceEEEEeEeecCCCCCchhhcccCccccCCcccccccccCcccEEEEEecCCCCCCcchhhHHHHHHHHHHHhhhhccc
Q 042848 14 RLVKIHEACKVPPFSDDSTAAAVAATTLPLTYFDTYCFNLSPVDILLFYEIKDLTWDSFNSEILPKLKHSLSITLLHYLP 93 (339)
Q Consensus 14 ~~V~v~~~~~V~P~~~~~~~~~~~~~~~~LS~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~ 93 (339)
|.|+++++++|+|+.|||. .-+.++||.||+.+.. .|++.+|||+.+. ....+..+++++||+||+++|++|||
T Consensus 1 ~~v~~~s~~~V~Ps~ptp~----~~~~~~LS~lD~~~~~-~~~~~~~fY~~~~-~~~~~~~~~~~~Lk~sLs~~L~~fyp 74 (444)
T PLN00140 1 MEVSIISRELIKPSSPSIH----HLKPFKLSLLDQLTPT-TYIPMIFFYPTNN-NQNFKGLQISIQLKRSLSETLSTFYP 74 (444)
T ss_pred CeeEEeccceeccCCCCcc----ccccCCCChHHhcccc-cccceEEEeeCCC-cccccchhHHHHHHHHHHHHHhhhhc
Confidence 5899999999999999972 1268899999997655 5999999999754 22111246789999999999999999
Q ss_pred cCcEEeCCCCCCCceEEeeCCCceEEEEEEeccchhhhhcCCCCCCccccccCCCCCCCCC----CCCCcEEEEEEEEec
Q 042848 94 VAGHLMWPPDAEKPAVYYFKDDGVSVTVAESNADLRRLLSSNNGTRRAVEFHPLAPRLSIS----EDKAEVTAIQITLFP 169 (339)
Q Consensus 94 LaGrl~~~~~~g~~~i~~~~~~gv~f~~a~~d~~~~~l~~~~~~p~~~~~~~~l~p~~~~~----~~~~Pll~vQvt~f~ 169 (339)
|||||+. +++|+|| ++||.|+||+++.+++|+.. .+ +...+++|+|..+.. ..+.|+++||||+|+
T Consensus 75 lAGRl~~-----~~~i~cn-~~Gv~fveA~~~~~l~d~l~---~~-~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvT~F~ 144 (444)
T PLN00140 75 FSGRVKD-----NLIIDNY-EEGVPFFETRVKGSLSDFLK---HP-QLELLNKFLPCQPFSYESDPEAIPQVAIQVNTFD 144 (444)
T ss_pred cCccccC-----CceeEcc-CCCceEEEEEecCcHHHhcC---CC-CHHHHHhhCCCCcccccCCccCCceEEEEEEEec
Confidence 9999984 5899996 89999999999999999843 22 122346678754431 235799999999999
Q ss_pred CCeEEEEEeeeccccchHHHHHHHHHHHHHHHhhhccCCcCCCCCCCCCCCCCccccccccCCCCCchHHHHHHhhhcCC
Q 042848 170 NQGFSICISVHHTVIDGKSAVLFIKSWAYLCKKLQQQNVVVPVPSLLPESLTPCFDRSLIKDPHGIDMVYVKQLMAFTGS 249 (339)
Q Consensus 170 ~GG~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r~~~G~~~~~~~~~~l~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~ 249 (339)
|||++||+++||.++||.|+++|+++||++|| |.. .+...|.+||.....|+...... .+...
T Consensus 145 cGG~~lG~~~~H~v~Dg~s~~~Fl~~WA~~~r---g~~---------~~~~~P~~dr~~~~~p~~~~~~~--~~~~~--- 207 (444)
T PLN00140 145 CGGIALGLCFSHKIIDAATASAFLDSWAANTR---GHY---------SEVINPDLFEASSFFPPLNSFPV--QFLLL--- 207 (444)
T ss_pred cCcEEEEeeeceEcccHHHHHHHHHHHHHHhc---CCC---------CCCCCcccccccccCCCCCcccc--ccccc---
Confidence 99999999999999999999999999999999 843 12357899996322232211110 00000
Q ss_pred CCCCCCcccccCCCcCCCceEEEEEEeCHHHHHHHHHHhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHhcCC-C-CCC
Q 042848 250 DPNTRSLKVTIPVAKVDSNLVRKTFTLTREDLNKLKHKLVLVNKDQHPSKQLHSSTFVLTCAHVFVCLVKARGE-D-ANT 327 (339)
Q Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~~St~dal~A~iW~~i~rAr~~-~-~~~ 327 (339)
. ... .....+++.++|+|++++|++||+.+.... ..++|+||+|+||+|||++||++. . .++
T Consensus 208 ~--~~~-------~~~~~~~v~~~f~fs~~~I~~LK~~~~~~~-------~~~~S~~e~vsA~iWr~~~rA~~~~~~~~~ 271 (444)
T PLN00140 208 M--EEN-------WFFKENYITKRFVFDAKAIATLRAKAKSKR-------VPNPSRIETLSCFIWKCCTAASRSISAAPR 271 (444)
T ss_pred c--ccc-------ccccCceEEEEEEECHHHHHHHHHhccccc-------CCCCchhHHHHHHHHHHHHHHhhhccCCCC
Confidence 0 000 012246789999999999999999987532 247999999999999999999643 2 357
Q ss_pred eEEEEEeeccCC
Q 042848 328 TVTFWVPADCRS 339 (339)
Q Consensus 328 ~~~l~~avd~R~ 339 (339)
.+.+.++||+|+
T Consensus 272 ~~~~~~~vn~R~ 283 (444)
T PLN00140 272 PSISVHAVNIRQ 283 (444)
T ss_pred ceEEEEEEeccc
Confidence 899999999995
No 6
>PRK09294 acyltransferase PapA5; Provisional
Probab=98.83 E-value=1.1e-06 Score=85.40 Aligned_cols=247 Identities=11% Similarity=0.141 Sum_probs=136.0
Q ss_pred ccccCCccccccccc-CcccEEEEEecCCCCCCcchhhHHHHHHHHHHHhhhhccccCcEEeCCCCCCCceEEeeCC--C
Q 042848 39 TTLPLTYFDTYCFNL-SPVDILLFYEIKDLTWDSFNSEILPKLKHSLSITLLHYLPVAGHLMWPPDAEKPAVYYFKD--D 115 (339)
Q Consensus 39 ~~~~LS~lD~~~~~~-~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~~i~~~~~--~ 115 (339)
-+.+|++.-...... .|+. +.+.... .. ..+.|+++|.+++.++|-|..++....+ |.+.+..... .
T Consensus 6 ~~~~L~~~~~~f~~~~~~~~--~~~~l~g-~l------D~~~L~~Al~~l~~rhp~Lr~~~~~~~~-~~~~~~~~~~~~~ 75 (416)
T PRK09294 6 VIRKLAPSEEVFARYEAFTG--YTAHLRG-VL------DIDALSDAFDALLRAHPVLAAHLEQDSD-GGWELVADDLLHP 75 (416)
T ss_pred cccCCchHHhhhhccCceEE--EEEEEcC-CC------CHHHHHHHHHHHHHhCHHhhEEEEECCC-CceEEeeCCcCCC
Confidence 355666665544321 2343 3444433 22 3899999999999999999999965443 5544433211 1
Q ss_pred ceEEEEEEeccchhhhhcCCCCCCccccccCCCCCCCCCCCCCcEEEEEEEEecCCeEEEEEeeeccccchHHHHHHHHH
Q 042848 116 GVSVTVAESNADLRRLLSSNNGTRRAVEFHPLAPRLSISEDKAEVTAIQITLFPNQGFSICISVHHTVIDGKSAVLFIKS 195 (339)
Q Consensus 116 gv~f~~a~~d~~~~~l~~~~~~p~~~~~~~~l~p~~~~~~~~~Pll~vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~ 195 (339)
.+.+...+ . .. . .+.++. +.+.+++.+.+.. .+++..|.+.+||.++||.|+..|++.
T Consensus 76 ~v~~~d~~---------~--~~--~-------~~~~~l-~~~~~l~~~~~~~-~~~~~~l~l~~hH~i~DG~S~~~ll~e 133 (416)
T PRK09294 76 GIVVVDGD---------A--AR--P-------LPELQL-DQGVSLLALDVVP-DDGGARVTLYIHHSIADAHHSASLLDE 133 (416)
T ss_pred CeEEEecc---------c--cc--c-------cCCCCC-CCCCceEEEEEEE-cCCCEEEEEEeccEeEccccHHHHHHH
Confidence 22221111 0 00 0 000111 1233467666644 478899999999999999999999999
Q ss_pred HHHHHHhh-hccCCcCCCCCCCCC-CCCCcccccccc--C-CC-CCc--hHHHHHHhh--hcCCCCCCCCcccccCCCcC
Q 042848 196 WAYLCKKL-QQQNVVVPVPSLLPE-SLTPCFDRSLIK--D-PH-GID--MVYVKQLMA--FTGSDPNTRSLKVTIPVAKV 265 (339)
Q Consensus 196 Wa~~~r~~-~G~~~~~~~~~~l~~-~~~P~~dr~~l~--~-p~-~~~--~~~~~~~~~--~~~~~~~~~~~~~~~p~~~~ 265 (339)
|.+.+.+. ++.. ...++. ...+.++ +.+. . .. ... ..+...+.. ++. .+..... .....
T Consensus 134 l~~~Y~~~~~~~~-----~~~~~~~~~~~~~e-d~~~~~~~~~~~~~~~~~~~~~~~~~~lp~---~~~~~~~--~~~~~ 202 (416)
T PRK09294 134 LWSRYTDVVTTGD-----PGPIRPQPAPQSLE-AVLAQRGIRRQALSGAERFMPAMYAYELPP---TPTAAVL--AKPGL 202 (416)
T ss_pred HHHHHHHHHhCCC-----CCCCCCCCCCcCHH-HHHHhcCCCcccccchhhhhhhhccccCCC---CCcCcCC--CCCCC
Confidence 99998732 1111 011110 0111111 1111 0 00 000 001111110 110 0000000 00001
Q ss_pred CCceEEEEEEeCHHHHHHHHHHhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeeccCC
Q 042848 266 DSNLVRKTFTLTREDLNKLKHKLVLVNKDQHPSKQLHSSTFVLTCAHVFVCLVKARGEDANTTVTFWVPADCRS 339 (339)
Q Consensus 266 ~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~~St~dal~A~iW~~i~rAr~~~~~~~~~l~~avd~R~ 339 (339)
+.......+.|+++..++|++.|.+. .+|.+.+|+|.+|.++.+..+. ++....+.++||+|+
T Consensus 203 ~~~~~~~~~~l~~~~~~~L~~~a~~~----------~~t~~~~l~Aa~~~~l~r~~~~-~~~~i~~~~pv~~R~ 265 (416)
T PRK09294 203 PQAVPVTRCRLSKAQTSSLAAFGRRH----------RLTVNALVSAAILLAEWQLRRT-PHVPLPYVYPVDLRF 265 (416)
T ss_pred CCCCceeEEEeCHHHHHHHHHHHHHc----------CCcHHHHHHHHHHHHHHHhcCC-CCCceeeecchhhHh
Confidence 12234566899999999999998753 4899999999999999988764 355677889999984
No 7
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics. This domain catalyses a condensation reaction to form peptide bonds in non-ribosomal peptide biosynthesis. It is usually found to the carboxy side of a phosphopantetheine binding domain (pp-binding). It has been shown that mutations in the HHXXXDG motif abolish activity suggesting this is part of the active site []. ; PDB: 2JGP_A 2VSQ_A 1L5A_A 2JUG_A 1Q9J_A.
Probab=98.38 E-value=2e-05 Score=71.93 Aligned_cols=242 Identities=14% Similarity=0.185 Sum_probs=123.1
Q ss_pred ccEEEEEecCCCCCCcchhhHHHHHHHHHHHhhhhccccCcEEeCCCCCCCceEEeeCCCceEEEEEEe-cc--chhhhh
Q 042848 56 VDILLFYEIKDLTWDSFNSEILPKLKHSLSITLLHYLPVAGHLMWPPDAEKPAVYYFKDDGVSVTVAES-NA--DLRRLL 132 (339)
Q Consensus 56 ~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~~i~~~~~~gv~f~~a~~-d~--~~~~l~ 132 (339)
....++|+.+. . -..+.|++++.+++.++|.|-.++...++ +...........+.+...+. +. ...+..
T Consensus 27 ~~~~~~~~l~~-~------~d~~~l~~A~~~~~~~h~~Lr~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (301)
T PF00668_consen 27 YNIAFVFELDG-P------IDIERLRQALERLIARHPILRTRFEEDDG-FEPYQRVLESSSIEIEYIDVSSDSDSEEEIL 98 (301)
T ss_dssp TEEEEEEEEEE-S--------HHHHHHHHHHHHHH-GGGGEEEEECTT-CSSEEEEESEEETTCEEEECCTS-HHHHHHH
T ss_pred EEEEEEEEecC-c------cchHHHhhhhHhhhhhhhhhhheeeeecc-cccceeeeeccccccccccccccccchhhhh
Confidence 34456666543 2 24889999999999999999999998654 34433332111122222221 11 111111
Q ss_pred cCCCCCCccccccCCCCCCCCCCCCCcEEEEEEEEecCCeEEEEEeeeccccchHHHHHHHHHHHHHHHhhhccCCcCCC
Q 042848 133 SSNNGTRRAVEFHPLAPRLSISEDKAEVTAIQITLFPNQGFSICISVHHTVIDGKSAVLFIKSWAYLCKKLQQQNVVVPV 212 (339)
Q Consensus 133 ~~~~~p~~~~~~~~l~p~~~~~~~~~Pll~vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r~~~G~~~~~~~ 212 (339)
. .. ...+.-.+ +-...|++.+.+-....++..|.+.+||.++||.|+..|++.+.+.+. |...
T Consensus 99 ~--~~------~~~~~~~~--~l~~~pl~~~~l~~~~~~~~~l~~~~hH~i~Dg~S~~~l~~~l~~~y~---~~~~---- 161 (301)
T PF00668_consen 99 E--LI------EQELNRPF--DLSEGPLFRFTLIRTSDDEYFLLISFHHIICDGWSLNILLRELLQAYA---GLSN---- 161 (301)
T ss_dssp H--HH------HHHHCC-----TCTSBSEEEEEEEEETTEEEEEEEEEGGG--HHHHHHHHHHHHHHHH---HHHT----
T ss_pred h--hh------hhhhhhcc--cccccchhhccccccccccchhcccccccccccccchhhhhhhHHhhh---cccc----
Confidence 1 00 00000001 112448888888777667999999999999999999999999999999 5320
Q ss_pred CCCCCCCCCCcccccc--ccC-CCCCchHHHHHHhh-hcCCCCCC-CCcccccCCCc-CCCceEEEEEEeCHHHHHHHHH
Q 042848 213 PSLLPESLTPCFDRSL--IKD-PHGIDMVYVKQLMA-FTGSDPNT-RSLKVTIPVAK-VDSNLVRKTFTLTREDLNKLKH 286 (339)
Q Consensus 213 ~~~l~~~~~P~~dr~~--l~~-p~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~p~~~-~~~~~~~~~f~fs~~~l~~LK~ 286 (339)
..+.. .+.+.... ... ..........+|+. .-. ...+ ..+....+... .........+.++.+..+.|++
T Consensus 162 --~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 237 (301)
T PF00668_consen 162 --PLPAP-SPSYKDFVEFQREYRNSDRLQEARAFWREYLR-GVPPAPSLPPDFPRPSIPSYSPSRISFSLSSELSKRLKE 237 (301)
T ss_dssp --T-----S-BHHHHHHHHHHHHTSHHHHHHHHHHHHHCC-TS-----CTTTT--CSSBEEBEEEEEEE--HHHHHHHHH
T ss_pred --ccccc-cccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccchhhhhhhh
Confidence 01110 11111100 000 00000011123322 100 0001 00000000000 1111246789999999999998
Q ss_pred HhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeeccCC
Q 042848 287 KLVLVNKDQHPSKQLHSSTFVLTCAHVFVCLVKARGEDANTTVTFWVPADCRS 339 (339)
Q Consensus 287 ~a~~~~~~~~~~~~~~~St~dal~A~iW~~i~rAr~~~~~~~~~l~~avd~R~ 339 (339)
.|... .+|.++++.|.+-.++.+--+ .....+.+++++|.
T Consensus 238 ~a~~~----------~~t~~~~l~aa~~~~l~~~~~---~~~~~i~~~~~~R~ 277 (301)
T PF00668_consen 238 FAKQY----------GVTPFAVLLAAFALALSRLTG---QDDVVIGTPVSGRP 277 (301)
T ss_dssp HHHHT----------TS-HHHHHHHHHHHHHHHHHT---TSEEEEEEEE---T
T ss_pred hhhhh----------cccchhhhhhhhhhhhhhccc---cceeeecccccCCC
Confidence 88653 489999999887777776643 46789999999985
No 8
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only]
Probab=98.30 E-value=6.8e-05 Score=70.29 Aligned_cols=249 Identities=14% Similarity=0.139 Sum_probs=136.4
Q ss_pred ccccccccCcccEEEEEecCCCCCCcchhhHHHHHHHHHHHhhhhccccCcEEeCCCCCCCc-e-EEeeCCC-ceEEEEE
Q 042848 46 FDTYCFNLSPVDILLFYEIKDLTWDSFNSEILPKLKHSLSITLLHYLPVAGHLMWPPDAEKP-A-VYYFKDD-GVSVTVA 122 (339)
Q Consensus 46 lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~-~-i~~~~~~-gv~f~~a 122 (339)
.|.-.. .+..+.++.|...- .++.|+.||..+.+.-|.|+.+.........+ + ++.+-++ -+.+.+.
T Consensus 18 ~d~~i~-~htl~~vi~f~~~f---------ni~~lkkAl~~svka~piL~c~f~eg~~~~~Wq~i~d~~v~~~~i~l~~t 87 (439)
T COG4908 18 DDYKIN-DHTLHYVITFGDKF---------NIDRLKKALRYSVKAVPILSCKFSEGEKRPFWQRILDFEVDQIAIHLEET 87 (439)
T ss_pred hhcCcC-CceEEEEEEeCCcc---------CHHHHHHHHHHHHHhhhhhhhhhhhcccchhHHHHhcccccceeEEEeee
Confidence 444432 24456666665321 38999999999999999999888653221122 1 1121122 2222222
Q ss_pred EeccchhhhhcCCCCCCccccccCCCCCCCCCCCCCcEEEEEEEEecCCeEEEEEeeeccccchHHHHHHHHHHHHHHHh
Q 042848 123 ESNADLRRLLSSNNGTRRAVEFHPLAPRLSISEDKAEVTAIQITLFPNQGFSICISVHHTVIDGKSAVLFIKSWAYLCKK 202 (339)
Q Consensus 123 ~~d~~~~~l~~~~~~p~~~~~~~~l~p~~~~~~~~~Pll~vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r~ 202 (339)
..|.++.|..- ..++-.........|++.|-+++- |-|=.|.+.+||+++||.|+-+.+...+++..
T Consensus 88 ~~~~~~~E~~f-----------s~Fi~~k~~~t~~~PqI~v~~~r~-~~~d~L~i~lhH~~~DgrG~leyL~ll~~~Ys- 154 (439)
T COG4908 88 KTDEPFGEVAF-----------SRFIVRKLNITKESPQIKVFVVRQ-TVGDTLVINLHHAVCDGRGFLEYLYLLARLYS- 154 (439)
T ss_pred cccccchhHHH-----------HHHHhcccccccCCCeEEEeeehh-ccCcEEEEEechhhhcchhHHHHHHHHHHHHH-
Confidence 23344444321 011100000013578888888887 88999999999999999999999999999997
Q ss_pred hhccCCcCCCCCCCCCCCCCccccccccCCCCC-ch-HHHHHHhhh-cC-CCCCCCCcccccCCC--cCCCceEEEEEEe
Q 042848 203 LQQQNVVVPVPSLLPESLTPCFDRSLIKDPHGI-DM-VYVKQLMAF-TG-SDPNTRSLKVTIPVA--KVDSNLVRKTFTL 276 (339)
Q Consensus 203 ~~G~~~~~~~~~~l~~~~~P~~dr~~l~~p~~~-~~-~~~~~~~~~-~~-~~~~~~~~~~~~p~~--~~~~~~~~~~f~f 276 (339)
+..++ +.-.|...-...++-..+ +. ......+.+ +. ...+.-... .|-. .......-..+++
T Consensus 155 --~L~~~--------~~~~p~~~~~g~k~i~~v~d~f~~~~~~r~~ik~~~e~n~i~~~--fP~~~s~d~~~m~~~~~~I 222 (439)
T COG4908 155 --KLLDN--------PNYQPNEESKGSKDIFGVRDLFDVLERKRGLIKNLIERNRITRV--FPLGGSPDGPNMSFEKTTI 222 (439)
T ss_pred --hcccC--------CCCCcchhhccccchhhhhhhhhHHHHHHHhhhhhhccCCCCcc--CCCcCCCCCCcceEEEEec
Confidence 53310 111232110000000000 00 000000000 00 000000000 0111 1234567788999
Q ss_pred CHHHHHHHHHHhhhhcccCCCCCCCCCCHHHHHHHHH--HHHHHHhcCCCCCCeEEEEEeeccCC
Q 042848 277 TREDLNKLKHKLVLVNKDQHPSKQLHSSTFVLTCAHV--FVCLVKARGEDANTTVTFWVPADCRS 339 (339)
Q Consensus 277 s~~~l~~LK~~a~~~~~~~~~~~~~~~St~dal~A~i--W~~i~rAr~~~~~~~~~l~~avd~R~ 339 (339)
+++.++++|+-+..+ ..|-||++.|.+ .+..-.--..+.+......++||+|+
T Consensus 223 ~~~ef~~ikay~k~~----------gaTiNDiilaa~~~fr~~y~~~~~k~~~~lsi~~~VDlRk 277 (439)
T COG4908 223 PSDEFKKIKAYAKVH----------GATINDIILAALLKFRLLYNTTHEKANNYLSIDMPVDLRK 277 (439)
T ss_pred CHHHHHHHHHhhhhc----------CCcHHHHHHHHHHHHHHHHhhhchhhcCeeeeceeeehhh
Confidence 999999999887643 378999998877 44332222223457788999999996
No 9
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase.
Probab=97.75 E-value=0.0012 Score=64.69 Aligned_cols=228 Identities=17% Similarity=0.155 Sum_probs=114.9
Q ss_pred HHHHHHHHHHhhhhccccCcEEeCCCC-CCCc-eEEeeCCCceEEEEEEec----c---chhhhhcCCCCCCccccccCC
Q 042848 77 LPKLKHSLSITLLHYLPVAGHLMWPPD-AEKP-AVYYFKDDGVSVTVAESN----A---DLRRLLSSNNGTRRAVEFHPL 147 (339)
Q Consensus 77 ~~~L~~sL~~~L~~~p~LaGrl~~~~~-~g~~-~i~~~~~~gv~f~~a~~d----~---~~~~l~~~~~~p~~~~~~~~l 147 (339)
.+.|++++.+++.++|.|--++...+. .|.. ++.. ....+.+.+...+ . .+.++.. ..
T Consensus 32 ~~~l~~al~~~~~rh~~LR~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~------------~~ 98 (446)
T TIGR02946 32 FEALRALLESRLPLAPRFRQRLREVPLGLGHPYWVED-PDFDLDYHVRRVALPAPGTRRELLELVG------------RL 98 (446)
T ss_pred HHHHHHHHHHhhccCChhhcccccCCCCCCCcEEeeC-CCCChHHhhccccCCCCCCHHHHHHHHH------------HH
Confidence 789999999999999999888875321 1332 2211 1111111110000 0 0111110 00
Q ss_pred CCCCCCCCCCCcEEEEEEEE-ecCCeEEEEEeeeccccchHHHHHHHHHHHHHHHhhhccCCcCCCCCCCCCC--CCCcc
Q 042848 148 APRLSISEDKAEVTAIQITL-FPNQGFSICISVHHTVIDGKSAVLFIKSWAYLCKKLQQQNVVVPVPSLLPES--LTPCF 224 (339)
Q Consensus 148 ~p~~~~~~~~~Pll~vQvt~-f~~GG~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r~~~G~~~~~~~~~~l~~~--~~P~~ 224 (339)
. ..+.+. ..|++.+.+.. +.+|+.++-+.+||.++||.|+..|++.+..... +.. ..+.. ..+..
T Consensus 99 ~-~~p~dl-~~Pl~r~~li~~~~~~~~~l~~~~HH~i~DG~S~~~l~~~l~~~~~---~~~-------~~~~~~~~~~~~ 166 (446)
T TIGR02946 99 M-STPLDR-SRPLWEMHLIEGLAGGRFAVLTKVHHALADGVAGLRLLARLLDDDP---DPP-------PLPAPPPPPQPS 166 (446)
T ss_pred h-cCCCCC-CCCCeEEEEEeccCCCeEEEEEEeehhhhchHHHHHHHHHHcCCCC---CCC-------CCCCCCCCCCCc
Confidence 0 011111 23888877776 6678899999999999999999999987766543 211 01100 00000
Q ss_pred ccccccCC-CCCchHHH-------H----HHhhh-cCC-CCCCCCcccccCCCc-CCCceEEEEEEeCHHHHHHHHHHhh
Q 042848 225 DRSLIKDP-HGIDMVYV-------K----QLMAF-TGS-DPNTRSLKVTIPVAK-VDSNLVRKTFTLTREDLNKLKHKLV 289 (339)
Q Consensus 225 dr~~l~~p-~~~~~~~~-------~----~~~~~-~~~-~~~~~~~~~~~p~~~-~~~~~~~~~f~fs~~~l~~LK~~a~ 289 (339)
.++.+... ........ . .+... .+. ......+....|... .......+.|.+....++.||+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~l~~~a~ 246 (446)
T TIGR02946 167 TRGLLSGALSGLPSALLRRVASTAPGVVRAAGRAVEGVARSARPALPFTAPPTPLNGPISRKRRFAAQSLPLADVKAVAK 246 (446)
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCCCCCcCCCCCCccceEEeeccCHHHHHHHHH
Confidence 01110000 00000000 0 01110 000 000000000001100 1111234567888888888887765
Q ss_pred hhcccCCCCCCCCCCHHHHHHHHHHHHHHHh---cCCCCCCeEEEEEeeccCC
Q 042848 290 LVNKDQHPSKQLHSSTFVLTCAHVFVCLVKA---RGEDANTTVTFWVPADCRS 339 (339)
Q Consensus 290 ~~~~~~~~~~~~~~St~dal~A~iW~~i~rA---r~~~~~~~~~l~~avd~R~ 339 (339)
.. .+|-||++.|.+-.++.+- ++..+....++.++||+|.
T Consensus 247 ~~----------g~T~ndvllaa~~~al~~~~~~~~~~~~~~i~~~~pv~~R~ 289 (446)
T TIGR02946 247 AF----------GVTINDVVLAAVAGALRRYLEERGELPDDPLVAMVPVSLRP 289 (446)
T ss_pred Hh----------CCCHHHHHHHHHHHHHHHHHHHcCCCCCCceEEEEeeeccc
Confidence 43 4899999999888888654 3323456689999999984
No 10
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2.3.1.84 from EC) enzymes approximately 500 residues long that seem to be restricted to Saccharomyces. These catalyse the esterification of isoamyl alcohol by acetyl coenzyme A [].; GO: 0004026 alcohol O-acetyltransferase activity, 0006066 alcohol metabolic process
Probab=97.67 E-value=0.0026 Score=62.95 Aligned_cols=62 Identities=16% Similarity=0.218 Sum_probs=47.4
Q ss_pred ceEEEEEEeCHHHHHHHHHHhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHhcC---CCCCCeEEEEEeeccCC
Q 042848 268 NLVRKTFTLTREDLNKLKHKLVLVNKDQHPSKQLHSSTFVLTCAHVFVCLVKARG---EDANTTVTFWVPADCRS 339 (339)
Q Consensus 268 ~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~~St~dal~A~iW~~i~rAr~---~~~~~~~~l~~avd~R~ 339 (339)
+...+.++|+++++++|++.|.++. +|---.|.|++-.++.+... ........+.+++|+|+
T Consensus 248 ~t~~~~~~i~~~~~~~ll~~CR~~~----------~TlT~~L~al~~~al~~~~~~~~~~~~~~~~~~~pvnlR~ 312 (480)
T PF07247_consen 248 KTRYRSLSISPEELKKLLKACRKHG----------TTLTALLHALIALALSKVQLPKPKSEKSSFKISTPVNLRR 312 (480)
T ss_pred cceEEEEEECHHHHHHHHHHHHHcC----------CCHHHHHHHHHHHHHHhhhcccccccCceEEEEeeeeCCC
Confidence 3456899999999999999998753 56667888888888887422 22345678899999996
No 11
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins. O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
Probab=97.18 E-value=0.0018 Score=58.95 Aligned_cols=129 Identities=16% Similarity=0.174 Sum_probs=72.9
Q ss_pred cccEEEEEecCCCCCCcchhhHHHHHHHHHHHhhhhccccCcEEeCCCC-CCCceEEeeCCCce----EEEEEEe--ccc
Q 042848 55 PVDILLFYEIKDLTWDSFNSEILPKLKHSLSITLLHYLPVAGHLMWPPD-AEKPAVYYFKDDGV----SVTVAES--NAD 127 (339)
Q Consensus 55 y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~-~g~~~i~~~~~~gv----~f~~a~~--d~~ 127 (339)
++-.+++|..+.... ....++.|++-+..-+..+|.|.-|++..+. .|++...- ++.+ .+.+... ..+
T Consensus 19 hv~~~~~~~~~~~~~---~~~~~~~l~~~~~~r~~~~p~fr~rv~~~~~~~~~p~W~~--d~~fDl~~Hv~~~~l~~pg~ 93 (263)
T PF03007_consen 19 HVGALAIFDPPTDGA---PPLDVERLRARLEARLARHPRFRQRVVRVPFGLGRPRWVE--DPDFDLDYHVRRVALPAPGD 93 (263)
T ss_pred eEEEEEEEEcCCCCC---CcchHHHHHHHHHHhhccCCccccceecCCCCCCCEEEEE--CCCCChHHceEEecCCCCCC
Confidence 567778888763121 1124788999999999999999999987432 24433221 2211 1111111 112
Q ss_pred hhhhhcCCCCCCccccccCCC-CCCCCCCCCCcEEEEEEEE-ecCCeEEEEEeeeccccchHHHHHHHHHHHHHH
Q 042848 128 LRRLLSSNNGTRRAVEFHPLA-PRLSISEDKAEVTAIQITL-FPNQGFSICISVHHTVIDGKSAVLFIKSWAYLC 200 (339)
Q Consensus 128 ~~~l~~~~~~p~~~~~~~~l~-p~~~~~~~~~Pll~vQvt~-f~~GG~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~ 200 (339)
.++|... ...+. -.+ +.+.|+=.+.+-. +..|+++|.+.+||+++||.+...++..+....
T Consensus 94 ~~~l~~~---------v~~l~~~pL---d~~rPlWe~~li~g~~~g~~Al~~k~HHal~DG~~~~~l~~~l~~~~ 156 (263)
T PF03007_consen 94 RAELQAL---------VSRLASTPL---DRSRPLWEVHLIEGLEGGRFALVLKVHHALADGVSLMRLLAALLDRS 156 (263)
T ss_pred HHHHHHH---------HHHHhcCCC---CCCCCCcEEEEEecCCCCcEEEEEeehhhhhhhHhHHHHHHHHhCCC
Confidence 2222110 00010 011 1244544333322 445779999999999999999999987765543
No 12
>PRK12316 peptide synthase; Provisional
Probab=96.96 E-value=0.054 Score=67.93 Aligned_cols=229 Identities=14% Similarity=0.132 Sum_probs=126.9
Q ss_pred HHHHHHHHHHhhhhccccCcEEeCCCCCCCceEEeeCCCceEEEEEEec-cchhhhhcCCCCCCccccccCCCCCCCCCC
Q 042848 77 LPKLKHSLSITLLHYLPVAGHLMWPPDAEKPAVYYFKDDGVSVTVAESN-ADLRRLLSSNNGTRRAVEFHPLAPRLSISE 155 (339)
Q Consensus 77 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~~i~~~~~~gv~f~~a~~d-~~~~~l~~~~~~p~~~~~~~~l~p~~~~~~ 155 (339)
+++|+++|.+++.+.+-|--++.... |.......+...+.+.+.+.. .+-++....+.. ..+. ....+.+-
T Consensus 86 ~~~l~~A~~~vv~rHe~LRt~f~~~~--~~~~q~v~~~~~~~~~~~d~~~~~~~~~~~~~~~-----~~~~-~~~~pfdl 157 (5163)
T PRK12316 86 RQALERAFASLVQRHETLRTVFPRGA--DDSLAQVPLDRPLEVEFEDCSGLPEAEQEARLRD-----EAQR-ESLQPFDL 157 (5163)
T ss_pred HHHHHHHHHHHHHHhhhceEEEEeeC--CeEEEEECCCCCCCccEEECCCCChhhHHHHHHH-----HHHH-hhcCCCCC
Confidence 89999999999999999988887543 232222212233333222211 110111000000 0000 00011122
Q ss_pred CCCcEEEEEEEEecCCeEEEEEeeeccccchHHHHHHHHHHHHHHHhh-hccCCcCCCCCCCCCCCCCc-------cccc
Q 042848 156 DKAEVTAIQITLFPNQGFSICISVHHTVIDGKSAVLFIKSWAYLCKKL-QQQNVVVPVPSLLPESLTPC-------FDRS 227 (339)
Q Consensus 156 ~~~Pll~vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r~~-~G~~~~~~~~~~l~~~~~P~-------~dr~ 227 (339)
...|++.+.+-....+...|.+.+||.++||.|+..|++.+++.+++. .|.. ..+++ .|. +.+.
T Consensus 158 ~~~pl~r~~l~~~~~~~~~l~l~~HHii~Dg~S~~~l~~el~~~Y~~~~~~~~------~~l~~--~~~~y~dy~~~q~~ 229 (5163)
T PRK12316 158 CEGPLLRVRLLRLGEEEHVLLLTLHHIVSDGWSMNVLIEEFSRFYSAYATGAE------PGLPA--LPIQYADYALWQRS 229 (5163)
T ss_pred CCCCceEEEEEEECCCcEEEEEcccceeechhHHHHHHHHHHHHHHHHhcCCC------CCCCC--CCCCHHHHHHHHHH
Confidence 467888888888767889999999999999999999999999999832 1211 11111 111 1111
Q ss_pred cccCCCCCchHHHHHHhhh-cCCCCCCCCccccc--CCCc-CCCceEEEEEEeCHHHHHHHHHHhhhhcccCCCCCCCCC
Q 042848 228 LIKDPHGIDMVYVKQLMAF-TGSDPNTRSLKVTI--PVAK-VDSNLVRKTFTLTREDLNKLKHKLVLVNKDQHPSKQLHS 303 (339)
Q Consensus 228 ~l~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--p~~~-~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~~ 303 (339)
.+.... . ....+||.- -.. .+..+.+.. +.+. .........+.++++..++|++.|... .+
T Consensus 230 ~~~~~~-~--~~~~~yW~~~l~~--~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~----------~~ 294 (5163)
T PRK12316 230 WLEAGE-Q--ERQLEYWRAQLGE--EHPVLELPTDHPRPAVPSYRGSRYEFSIDPALAEALRGTARRQ----------GL 294 (5163)
T ss_pred HhcChh-H--HHHHHHHHHHhCC--CCccccCCCCCCCCCCCCcCCeeEEEecCHHHHHHHHHHHHHc----------CC
Confidence 111111 1 111234321 000 011111100 0000 112345678999999999999998764 48
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeeccCC
Q 042848 304 STFVLTCAHVFVCLVKARGEDANTTVTFWVPADCRS 339 (339)
Q Consensus 304 St~dal~A~iW~~i~rAr~~~~~~~~~l~~avd~R~ 339 (339)
|.|.++.|.++..+.+--+ .+...+.+++..|.
T Consensus 295 T~~~~llaa~a~lL~~~tg---~~dv~ig~pvs~R~ 327 (5163)
T PRK12316 295 TLFMLLLGAFNVLLHRYSG---QTDIRVGVPIANRN 327 (5163)
T ss_pred CHHHHHHHHHHHHHHHhcC---CCCeEEEeeeCCCC
Confidence 8999999987766666533 45678888888773
No 13
>PRK12467 peptide synthase; Provisional
Probab=96.90 E-value=0.038 Score=67.82 Aligned_cols=223 Identities=13% Similarity=0.141 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHhhhhccccCcEEeCCCCCCCc-eEEeeCCCceEEEEEEecc--------chhhhhcCCCCCCccccccC
Q 042848 76 ILPKLKHSLSITLLHYLPVAGHLMWPPDAEKP-AVYYFKDDGVSVTVAESNA--------DLRRLLSSNNGTRRAVEFHP 146 (339)
Q Consensus 76 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~-~i~~~~~~gv~f~~a~~d~--------~~~~l~~~~~~p~~~~~~~~ 146 (339)
.++.|++++.+++.+++-|--++...+ |.+ .+.. +...+.+.+.+.+. .+.++.. ..
T Consensus 85 D~~~L~~A~~~vv~rH~~LRt~f~~~~--~~~~q~v~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~--~~--------- 150 (3956)
T PRK12467 85 DVSALRRAFDALVARHESLRTRFVQDE--EGFRQVID-ASLSLTIPLDDLANEQGRARESQIEAYIN--EE--------- 150 (3956)
T ss_pred CHHHHHHHHHHHHHHhhhheEEEEecC--CeEEEEEc-CCCCCceeEEecccCChhhHHHHHHHHHH--HH---------
Confidence 389999999999999999988887543 333 2221 12222222222110 0111111 00
Q ss_pred CCCCCCCCCCCCcEEEEEEEEecCCeEEEEEeeeccccchHHHHHHHHHHHHHHHhh-hccCCcCCCCCCCCCCCCCcc-
Q 042848 147 LAPRLSISEDKAEVTAIQITLFPNQGFSICISVHHTVIDGKSAVLFIKSWAYLCKKL-QQQNVVVPVPSLLPESLTPCF- 224 (339)
Q Consensus 147 l~p~~~~~~~~~Pll~vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r~~-~G~~~~~~~~~~l~~~~~P~~- 224 (339)
. ..+.+-...|++.+.+-....+...+.+.+||.++||.|+..|++.+++.+.+. +|.. ..+++...+..
T Consensus 151 ~--~~~fdL~~~pl~r~~l~~~~~~~~~l~l~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~------~~~~~~~~~y~d 222 (3956)
T PRK12467 151 V--ARPFDLANGPLLRVRLLRLADDEHVLVVTLHHIISDGWSMRVLVEELVQLYSAYSQGRE------PSLPALPIQYAD 222 (3956)
T ss_pred h--cCCCCCCCCCceEEEEEEECCCcEEEEEecCeeeEccchHHHHHHHHHHHHHHHhcCCC------CCCCCCCCCHHH
Confidence 0 011112467888888887777899999999999999999999999999998732 1321 11111001111
Q ss_pred ----ccccccCCCCCchHHHHHHhhh--cCCCCCCCCcccc--cCCCc-CCCceEEEEEEeCHHHHHHHHHHhhhhcccC
Q 042848 225 ----DRSLIKDPHGIDMVYVKQLMAF--TGSDPNTRSLKVT--IPVAK-VDSNLVRKTFTLTREDLNKLKHKLVLVNKDQ 295 (339)
Q Consensus 225 ----dr~~l~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~p~~~-~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~ 295 (339)
.+..+.... . ....+||.- .+. +..+.+. .+.+. .........+.++++..++|++.|...
T Consensus 223 y~~~~~~~l~~~~-~--~~~~~yW~~~L~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~---- 292 (3956)
T PRK12467 223 YAIWQRSWLEAGE-R--ERQLAYWQEQLGGE---HTVLELPTDRPRPAVPSYRGARLRVDLPQALSAGLKALAQRE---- 292 (3956)
T ss_pred HHHHHHHHhcChh-h--HHHHHHHHHHhccC---CCcCCCCCCCCCCCCCCcCceeEEEeCCHHHHHHHHHHHHHh----
Confidence 111111111 1 111233321 110 0111110 00000 111234577899999999999998764
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeeccCC
Q 042848 296 HPSKQLHSSTFVLTCAHVFVCLVKARGEDANTTVTFWVPADCRS 339 (339)
Q Consensus 296 ~~~~~~~~St~dal~A~iW~~i~rAr~~~~~~~~~l~~avd~R~ 339 (339)
.+|.+.++.|.+...+.|--+ .+.+.+..++..|.
T Consensus 293 ------g~T~~~vl~aA~a~lL~r~tg---~~dv~iG~pvsgR~ 327 (3956)
T PRK12467 293 ------GVTLFMVLLASFQTLLHRYSG---QSDIRIGVPNANRN 327 (3956)
T ss_pred ------CCCHHHHHHHHHHHHHHHhcC---CCCEEEEeccCCCC
Confidence 378999999877666655533 45688888888773
No 14
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=96.84 E-value=0.22 Score=55.37 Aligned_cols=222 Identities=13% Similarity=0.042 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHhhhhccccCcEEeCCCCCCCc-eEEeeCCCceE-EEEEEec--cc----hhhhhcCCCCCCccccccCC
Q 042848 76 ILPKLKHSLSITLLHYLPVAGHLMWPPDAEKP-AVYYFKDDGVS-VTVAESN--AD----LRRLLSSNNGTRRAVEFHPL 147 (339)
Q Consensus 76 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~-~i~~~~~~gv~-f~~a~~d--~~----~~~l~~~~~~p~~~~~~~~l 147 (339)
.+++|+++|..++.+++.|--++...+ |.+ .+... ...+. +.+.+.. .+ ..++.. . ..
T Consensus 43 d~~~l~~Al~~lv~rh~~LRt~f~~~~--g~~~q~v~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~--~---------~~ 108 (1296)
T PRK10252 43 DAPLLARAVVAGLAEADTLRMRFTEDN--GEVWQWVDP-ALTFPLPEIIDLRTQPDPHAAAQALMQ--A---------DL 108 (1296)
T ss_pred CHHHHHHHHHHHHHhccceEEEEEcCC--CeEEEEECC-CCCCCcCceeecCCCCCHHHHHHHHHH--H---------Hh
Confidence 389999999999999999988876542 332 33221 21111 1111110 00 111111 0 00
Q ss_pred CCCCCCCCCC-CcEEEEEEEEecCCeEEEEEeeeccccchHHHHHHHHHHHHHHHhh-hccCCcCCCCCCCCCCCCCccc
Q 042848 148 APRLSISEDK-AEVTAIQITLFPNQGFSICISVHHTVIDGKSAVLFIKSWAYLCKKL-QQQNVVVPVPSLLPESLTPCFD 225 (339)
Q Consensus 148 ~p~~~~~~~~-~Pll~vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r~~-~G~~~~~~~~~~l~~~~~P~~d 225 (339)
. .+.+-.. .|++++.+.....+...|.+.+||.++||.|+..|++.+++++.+. .|.. ...+ ...+..+
T Consensus 109 ~--~~fdl~~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~------~~~~-~~~~~~~ 179 (1296)
T PRK10252 109 Q--QDLRVDSGKPLVFHQLIQLGDNRWYWYQRYHHLLVDGFSFPAITRRIAAIYCAWLRGEP------TPAS-PFTPFAD 179 (1296)
T ss_pred c--CCcCCCCCCCCeEEEEEEEcCCEEEEEEecCceeEccccHHHHHHHHHHHHHHHhcCCC------CCCC-CCccHHH
Confidence 0 0111123 5899999998877999999999999999999999999999999732 1321 1111 0011100
Q ss_pred --c---ccccCCCCCchHHHHHHhhh--cCCCCCCCCcccccCCC-cCCCceEEEEEEeCHHHHHHHHHHhhhhcccCCC
Q 042848 226 --R---SLIKDPHGIDMVYVKQLMAF--TGSDPNTRSLKVTIPVA-KVDSNLVRKTFTLTREDLNKLKHKLVLVNKDQHP 297 (339)
Q Consensus 226 --r---~~l~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~p~~-~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~ 297 (339)
. ...... ... ...+||.- .+.. ....+....+.. ..........+.++.+..++|++.+.
T Consensus 180 ~~~~~~~~~~~~-~~~--~~~~yW~~~L~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------- 247 (1296)
T PRK10252 180 VVEEYQRYRASE-AWQ--RDAAFWAEQRRQLP-PPASLSPAPLPGRSASADILRLKLEFTDGAFRQLAAQAS-------- 247 (1296)
T ss_pred HHHHHHHHhhCc-hhh--HHHHHHHHHhcCCC-CcccCCCCCCCCccCCCcceeeeeecCHHHHHHHHHHHh--------
Confidence 0 011111 111 11233321 1100 001110000000 01112334567889999999987543
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeeccCC
Q 042848 298 SKQLHSSTFVLTCAHVFVCLVKARGEDANTTVTFWVPADCRS 339 (339)
Q Consensus 298 ~~~~~~St~dal~A~iW~~i~rAr~~~~~~~~~l~~avd~R~ 339 (339)
.+|.+.++.|.+...+.|--+ .+...+..++..|.
T Consensus 248 ----~~~~~~~l~aa~~~lL~r~sg---~~dv~ig~p~sgR~ 282 (1296)
T PRK10252 248 ----GVQRPDLALALVALWLGRLCG---RMDYAAGFIFMRRL 282 (1296)
T ss_pred ----cCCHHHHHHHHHHHHHHHHhC---CCceEEEEEecCCC
Confidence 256688888877666655433 35677888877773
No 15
>PRK12467 peptide synthase; Provisional
Probab=96.74 E-value=0.14 Score=63.04 Aligned_cols=220 Identities=11% Similarity=0.087 Sum_probs=122.7
Q ss_pred HHHHHHHHHHHhhhhccccCcEEeCCCCCCC-ceEEeeCCCceEEEEEEec------cchhhhhcCCCCCCccccccCCC
Q 042848 76 ILPKLKHSLSITLLHYLPVAGHLMWPPDAEK-PAVYYFKDDGVSVTVAESN------ADLRRLLSSNNGTRRAVEFHPLA 148 (339)
Q Consensus 76 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~-~~i~~~~~~gv~f~~a~~d------~~~~~l~~~~~~p~~~~~~~~l~ 148 (339)
.+++|++++.+++.+++.|--++...++.|. ..+... ...+.+.+.... ..++++.. .. .
T Consensus 2681 d~~~l~~A~~~vv~rH~~LRT~f~~~~~~~~~~Qvv~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---------~- 2747 (3956)
T PRK12467 2681 DVERFRTAWQAVIDRHEILRSGFLWDGELEEPLQVVYK-QARLPFSRLDWRDRADLEQALDALAA--AD---------R- 2747 (3956)
T ss_pred CHHHHHHHHHHHHHHhhhhheEEEecCCCCCceEEEcc-cccCceeEeecccchhHHHHHHHHHH--hh---------h-
Confidence 3899999999999999999888765432112 333332 222233222110 01112211 00 0
Q ss_pred CCCCCCCCCCcEEEEEEEEecCCeEEEEEeeeccccchHHHHHHHHHHHHHHHhhhccCCcCCCCCCCCCCCCCcccccc
Q 042848 149 PRLSISEDKAEVTAIQITLFPNQGFSICISVHHTVIDGKSAVLFIKSWAYLCKKLQQQNVVVPVPSLLPESLTPCFDRSL 228 (339)
Q Consensus 149 p~~~~~~~~~Pll~vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r~~~G~~~~~~~~~~l~~~~~P~~dr~~ 228 (339)
..+.+-...|++.+.+-....+...|-+.+||.++||.|+..+++.+.+.+. |.. .++ .+..-++.
T Consensus 2748 -~~~fdl~~~pl~R~~l~~~~~~~~~l~l~~HHii~DGwS~~~l~~el~~~Y~---~~~--------~~~--~~~~y~dy 2813 (3956)
T PRK12467 2748 -QQGFDLLSAPLLRLTLVRTGEDRHHLIYTNHHILMDGWSGSQLLGEVLQRYF---GQP--------PPA--REGRYRDY 2813 (3956)
T ss_pred -hcCCCCCCCcceEEEEEEEcCcEEEEEEecCceeEcCccHHHHHHHHHHHhc---CCC--------CCC--CCCCHHHH
Confidence 0011123678888888887778889999999999999999999999999998 743 121 11112222
Q ss_pred cc---CCCCCchHHHHHHhh--hcCCCCCCCCcccccC-CCc-CCCceEEEEEEeCHHHHHHHHHHhhhhcccCCCCCCC
Q 042848 229 IK---DPHGIDMVYVKQLMA--FTGSDPNTRSLKVTIP-VAK-VDSNLVRKTFTLTREDLNKLKHKLVLVNKDQHPSKQL 301 (339)
Q Consensus 229 l~---~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~p-~~~-~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~ 301 (339)
+. ... .....+||. +.+.. .+..+....+ ... .........+.++++..++|++.+...
T Consensus 2814 ~~~~~~~~---~~~~~~yW~~~L~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~---------- 2879 (3956)
T PRK12467 2814 IAWLQAQD---AEASEAFWKEQLAALE-EPTRLARALYPAPAEAVAGHGAHYLHLDATQTRQLIEFARRH---------- 2879 (3956)
T ss_pred HHHHhccc---HHHHHHHHHHHhcCCC-cccccccccCCCccccccCcceEEEEcCHHHHHHHHHHHHHh----------
Confidence 11 111 111223332 11100 0111100000 000 111223567789999999999988754
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeeccCC
Q 042848 302 HSSTFVLTCAHVFVCLVKARGEDANTTVTFWVPADCRS 339 (339)
Q Consensus 302 ~~St~dal~A~iW~~i~rAr~~~~~~~~~l~~avd~R~ 339 (339)
.+|.+.++.|. |..+-..-. ..+.+.|+.+|.+|.
T Consensus 2880 ~vT~~~v~~aA-wa~~L~~~t--g~~dv~fG~~vsGR~ 2914 (3956)
T PRK12467 2880 RVTLNTLVQGA-WLLLLQRFT--GQDTVCFGATVAGRP 2914 (3956)
T ss_pred CCCHHHHHHHH-HHHHHHHhc--CCCCEEEEeeeCCCC
Confidence 37888888875 544433322 245678888888873
No 16
>PRK12316 peptide synthase; Provisional
Probab=96.33 E-value=0.28 Score=61.83 Aligned_cols=222 Identities=12% Similarity=0.061 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHhhhhccccCcEEeCCCCCC-CceEEeeCCCceEEEEEEec------cchhhhhcCCCCCCccccccCCC
Q 042848 76 ILPKLKHSLSITLLHYLPVAGHLMWPPDAE-KPAVYYFKDDGVSVTVAESN------ADLRRLLSSNNGTRRAVEFHPLA 148 (339)
Q Consensus 76 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~~g-~~~i~~~~~~gv~f~~a~~d------~~~~~l~~~~~~p~~~~~~~~l~ 148 (339)
.+++|++++..++.+++.|--++....+.| -+.+... +..+++.+.... ..++++.. .. ..
T Consensus 4137 d~~~l~~Aw~~vv~rh~iLRT~f~~~~~~~~~~QvV~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---------~~ 4204 (5163)
T PRK12316 4137 DVERFRAAWQAALDRHDVLRSGFVWQGELGRPLQVVHK-QVSLPFAELDWRGRADLQAALDALAA--AE---------RE 4204 (5163)
T ss_pred CHHHHHHHHHHHHHhhhHhheEEEecCCCCCceEEecc-cccCceEeccCCchhhHHHHHHHHHH--HH---------Hh
Confidence 389999999999999999988876543212 2344332 222333222211 01122211 00 00
Q ss_pred CCCCCCCCCCcEEEEEEEEecCCeEEEEEeeeccccchHHHHHHHHHHHHHHHhhhccCCcCCCCCCCCCCCCCcccccc
Q 042848 149 PRLSISEDKAEVTAIQITLFPNQGFSICISVHHTVIDGKSAVLFIKSWAYLCKKLQQQNVVVPVPSLLPESLTPCFDRSL 228 (339)
Q Consensus 149 p~~~~~~~~~Pll~vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r~~~G~~~~~~~~~~l~~~~~P~~dr~~ 228 (339)
.+.+-...|++.+.+.....|...+.+.+||.++||.|+..+++.+.+.+. |.. ... .+..-++.
T Consensus 4205 --~~fdl~~~pl~R~~l~~~~~~~~~l~l~~HH~i~DGwS~~il~~el~~~Y~---~~~--------~~~--~~~~y~dy 4269 (5163)
T PRK12316 4205 --RGFDLQRAPLLRLVLVRTAEGRHHLIYTNHHILMDGWSNSQLLGEVLERYS---GRP--------PAQ--PGGRYRDY 4269 (5163)
T ss_pred --CCCCcCCCCceEEEEEEEcCCEEEEEEEccceeeccccHHHHHHHHHHHhc---CCC--------CCC--CCcCHHHH
Confidence 011113568888888777778889999999999999999999999999998 743 111 11111222
Q ss_pred ccCCCCCchHHHHHHhhh--cCCCCCCCCcccc--cCCCcCCCceEEEEEEeCHHHHHHHHHHhhhhcccCCCCCCCCCC
Q 042848 229 IKDPHGIDMVYVKQLMAF--TGSDPNTRSLKVT--IPVAKVDSNLVRKTFTLTREDLNKLKHKLVLVNKDQHPSKQLHSS 304 (339)
Q Consensus 229 l~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~p~~~~~~~~~~~~f~fs~~~l~~LK~~a~~~~~~~~~~~~~~~S 304 (339)
+.--...+.....+||.. .+.. .+..+... .+............+.++.+..++|++.|... .+|
T Consensus 4270 i~~~~~~~~~~~~~yW~~~L~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~----------~vT 4338 (5163)
T PRK12316 4270 IAWLQRQDAAASEAFWREQLAALD-EPTRLAQAIARADLRSANGYGEHVRELDATATARLREFARTQ----------RVT 4338 (5163)
T ss_pred HHHHHhccHHHHHHHHHHHhcCCC-CCcCCCcccccccccccCccceEEEEcCHHHHHHHHHHHHHc----------CCC
Confidence 210000011112233321 1100 11111000 00000111233456789999999999988753 377
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCeEEEEEeeccC
Q 042848 305 TFVLTCAHVFVCLVKARGEDANTTVTFWVPADCR 338 (339)
Q Consensus 305 t~dal~A~iW~~i~rAr~~~~~~~~~l~~avd~R 338 (339)
.+.++.|. |..+.+... ....+.|++++.+|
T Consensus 4339 ~~~vl~aA-wa~vL~~~t--g~~dV~fG~~~sGR 4369 (5163)
T PRK12316 4339 LNTLVQAA-WLLLLQRYT--GQDTVAFGATVAGR 4369 (5163)
T ss_pred HHHHHHHH-HHHHHHHHc--CCCcEEEEeeeCCC
Confidence 77777765 666544332 34678888888888
No 17
>PRK05691 peptide synthase; Validated
Probab=96.15 E-value=0.25 Score=61.45 Aligned_cols=224 Identities=12% Similarity=0.150 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHhhhhccccCcEEeCCCCCCCceEEeeCCCceEEEEEEec--------cchhhhhcCCCCCCccccccCC
Q 042848 76 ILPKLKHSLSITLLHYLPVAGHLMWPPDAEKPAVYYFKDDGVSVTVAESN--------ADLRRLLSSNNGTRRAVEFHPL 147 (339)
Q Consensus 76 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~~~i~~~~~~gv~f~~a~~d--------~~~~~l~~~~~~p~~~~~~~~l 147 (339)
.+++|++|+.+++.+++.|--++......+-..+... .....+.+.+.. ..++.+.. . ..
T Consensus 3293 d~~~l~~Aw~~vv~rh~~LRT~f~~~~~~~~~Qvv~~-~~~~~~~~~d~~~~~~~~~~~~l~~~~~--~---------~~ 3360 (4334)
T PRK05691 3293 DPERFAQAWQAVVARHEALRASFSWNAGETMLQVIHK-PGRTPIDYLDWRGLPEDGQEQRLQALHK--Q---------ER 3360 (4334)
T ss_pred CHHHHHHHHHHHHHHhHHhheEeeecCCCCcEEEEcc-CCCCceeEeecccCChhhhHHHHHHHHH--H---------HH
Confidence 3899999999999999999888865443222344432 222222222210 01111111 0 00
Q ss_pred CCCCCCCCCCCcEEEEEEEEecCCeEEEEEeeeccccchHHHHHHHHHHHHHHHhh-hccCCcCCCCCCCCCCCCCcccc
Q 042848 148 APRLSISEDKAEVTAIQITLFPNQGFSICISVHHTVIDGKSAVLFIKSWAYLCKKL-QQQNVVVPVPSLLPESLTPCFDR 226 (339)
Q Consensus 148 ~p~~~~~~~~~Pll~vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r~~-~G~~~~~~~~~~l~~~~~P~~dr 226 (339)
. .+.+-...|++.+.+.....+...+-+.+||.++||.|+..+++.+.+.+.+. +|.. ..++ ..|.+ +
T Consensus 3361 ~--~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~DGwS~~ll~~dl~~~Y~~~~~g~~------~~~~--~~~~y-~ 3429 (4334)
T PRK05691 3361 E--AGFDLLNQPPFHLRLIRVDEARYWFMMSNHHILIDAWCRSLLMNDFFEIYTALGEGRE------AQLP--VPPRY-R 3429 (4334)
T ss_pred h--CCCCcCCCCcEEEEEEEecCcEEEEEEEehhhhhccccHHHHHHHHHHHHHHhhCCCC------CCCC--CCCCh-H
Confidence 0 01112367888888877766778899999999999999999999999998732 1321 1121 12211 2
Q ss_pred cccc---CCCCCchHHHHHHhhh--cCCCCCCCCcccccCCCc-CCC-----ceEEEEEEeCHHHHHHHHHHhhhhcccC
Q 042848 227 SLIK---DPHGIDMVYVKQLMAF--TGSDPNTRSLKVTIPVAK-VDS-----NLVRKTFTLTREDLNKLKHKLVLVNKDQ 295 (339)
Q Consensus 227 ~~l~---~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~p~~~-~~~-----~~~~~~f~fs~~~l~~LK~~a~~~~~~~ 295 (339)
+.+. ... . ....+||.. .+.. .+..+-...|... ... ......+.++.+..++|++.|...
T Consensus 3430 dyi~~l~~~~-~--~~~~~yW~~~L~g~~-~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~~~---- 3501 (4334)
T PRK05691 3430 DYIGWLQRQD-L--AQARQWWQDNLRGFE-RPTPIPSDRPFLREHAGDSGGMVVGDCYTRLDAADGARLRELAQAH---- 3501 (4334)
T ss_pred HHHHHHHhCc-H--HHHHHHHHHHhcCCC-ccccCCcCCcccccccccccccccceeEEecCHHHHHHHHHHHHHh----
Confidence 2211 111 1 111233321 1100 0000000001000 000 122345789999999999888753
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeeccCC
Q 042848 296 HPSKQLHSSTFVLTCAHVFVCLVKARGEDANTTVTFWVPADCRS 339 (339)
Q Consensus 296 ~~~~~~~~St~dal~A~iW~~i~rAr~~~~~~~~~l~~avd~R~ 339 (339)
.+|.+-++.| .|..+...- ...+.+.|+..+-+|.
T Consensus 3502 ------~vT~~~vl~a-awalvL~~y--tg~~dVvfG~~~sGR~ 3536 (4334)
T PRK05691 3502 ------QLTVNTFAQA-AWALVLRRY--SGDRDVLFGVTVAGRP 3536 (4334)
T ss_pred ------CCCHHHHHHH-HHHHHHHHh--cCCCceEEEeccCCCC
Confidence 3677777766 455544332 2356788888888883
No 18
>PRK05691 peptide synthase; Validated
Probab=96.11 E-value=0.37 Score=60.01 Aligned_cols=220 Identities=13% Similarity=0.148 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHhhhhccccCcEEeCCCCCCC-ceEEeeCCCceEEEEEEec-cc-------hhhhhcCCCCCCccccccC
Q 042848 76 ILPKLKHSLSITLLHYLPVAGHLMWPPDAEK-PAVYYFKDDGVSVTVAESN-AD-------LRRLLSSNNGTRRAVEFHP 146 (339)
Q Consensus 76 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~~g~-~~i~~~~~~gv~f~~a~~d-~~-------~~~l~~~~~~p~~~~~~~~ 146 (339)
.+++|++++.+++.+++.|--++...+ |. +.+.. ....+.+...+.. .+ +.++.. . .
T Consensus 1764 d~~~L~~A~~~lv~rH~~LRT~f~~~~--~~~~q~v~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~---------~ 1829 (4334)
T PRK05691 1764 DVDRFEAALQALILRHETLRTTFPSVD--GVPVQQVA-EDSGLRMDWQDFSALPADARQQRLQQLAD--S---------E 1829 (4334)
T ss_pred CHHHHHHHHHHHHHhCCcceEEEEccC--CeEEEEEC-CCCCCCeeEeeccCCChHhHHHHHHHHHH--H---------H
Confidence 389999999999999999988887533 33 23222 2223333322211 11 111111 0 0
Q ss_pred CCCCCCCCCCCCcEEEEEEEEecCCeEEEEEeeeccccchHHHHHHHHHHHHHHHhh-hccCCcCCCCCCCCCCCCCc-c
Q 042848 147 LAPRLSISEDKAEVTAIQITLFPNQGFSICISVHHTVIDGKSAVLFIKSWAYLCKKL-QQQNVVVPVPSLLPESLTPC-F 224 (339)
Q Consensus 147 l~p~~~~~~~~~Pll~vQvt~f~~GG~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r~~-~G~~~~~~~~~~l~~~~~P~-~ 224 (339)
.. .+.+-...|++.+.+-....+...+-+.+||.++||.|+..|++.+++.+++. .|.. .++++ .|. +
T Consensus 1830 ~~--~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~ll~~el~~~Y~~~~~~~~------~~~~~--~~~~y 1899 (4334)
T PRK05691 1830 AH--QPFDLERGPLLRACLVKAAEREHYFVLTLHHIVTEGWAMDIFARELGALYEAFLDDRE------SPLEP--LPVQY 1899 (4334)
T ss_pred Hh--cCCCCCCCceeEEEEEEeCCCcEEEEEecchhhhhhhhHHHHHHHHHHHHHHHhcCCC------CCCCC--CCCCH
Confidence 00 01112356888888877766778899999999999999999999999999732 1311 11110 111 1
Q ss_pred -c-----cccccCCCCCchHHHHHHhh--hcCCCCCCCCcccc--cCCCc-CCCceEEEEEEeCHHHHHHHHHHhhhhcc
Q 042848 225 -D-----RSLIKDPHGIDMVYVKQLMA--FTGSDPNTRSLKVT--IPVAK-VDSNLVRKTFTLTREDLNKLKHKLVLVNK 293 (339)
Q Consensus 225 -d-----r~~l~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~p~~~-~~~~~~~~~f~fs~~~l~~LK~~a~~~~~ 293 (339)
| +..+... .. ....+||. +.+. +..+.+. .+.+. .........+.++++..++|++.+...
T Consensus 1900 ~dy~~~~~~~l~~~-~~--~~~~~yW~~~L~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~-- 1971 (4334)
T PRK05691 1900 LDYSVWQRQWLESG-ER--QRQLDYWKAQLGNE---HPLLELPADRPRPPVQSHRGELYRFDLSPELAARVRAFNAQR-- 1971 (4334)
T ss_pred HHHHHHHHHHhcCh-hh--HHHHHHHHHHhcCC---CCcccCCCCCCCCcccCcCceEEEEECCHHHHHHHHHHHHHh--
Confidence 1 1111111 11 11123332 1110 0111110 00000 111234567889999999999888653
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeeccC
Q 042848 294 DQHPSKQLHSSTFVLTCAHVFVCLVKARGEDANTTVTFWVPADCR 338 (339)
Q Consensus 294 ~~~~~~~~~~St~dal~A~iW~~i~rAr~~~~~~~~~l~~avd~R 338 (339)
.+|.+.++.|.+...+.+--+ .+.+.+..++..|
T Consensus 1972 --------~vT~~~~l~aA~a~lL~r~sg---~~dvv~G~~vsgR 2005 (4334)
T PRK05691 1972 --------GLTLFMTMTATLAALLYRYSG---QRDLRIGAPVANR 2005 (4334)
T ss_pred --------CCCHHHHHHHHHHHHHHHhcC---CCCeEEEecccCC
Confidence 378888888766665555432 3567777777776
No 19
>PRK13757 chloramphenicol acetyltransferase; Provisional
Probab=81.24 E-value=2.1 Score=37.82 Aligned_cols=44 Identities=23% Similarity=0.346 Sum_probs=32.3
Q ss_pred CCcEEEE-EEEEecCCe--EEEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 157 KAEVTAI-QITLFPNQG--FSICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 157 ~~Pll~v-Qvt~f~~GG--~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
..|.+.. +... ..|. +-|++.+||+++||.=+..|+..+.+.+.
T Consensus 167 ~~P~it~GKy~~-~~gr~~mPvSvqvHHa~~DG~Hv~~F~~~lQ~~~~ 213 (219)
T PRK13757 167 FAPVFTMGKYYT-QGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_pred cCcEEEeeceEE-ECCEEEEEEEEEEehhccchHHHHHHHHHHHHHHH
Confidence 4466652 3222 1343 77888999999999999999999988765
No 20
>PF00302 CAT: Chloramphenicol acetyltransferase; InterPro: IPR001707 Chloramphenicol acetyltransferase (CAT) (2.3.1.28 from EC) [] catalyzes the acetyl-CoA dependent acetylation of chloramphenicol (Cm), an antibiotic which inhibits prokaryotic peptidyltransferase activity. Acetylation of Cm by CAT inactivates the antibiotic. A histidine residue, located in the C-terminal section of the enzyme, plays a central role in its catalytic mechanism. There is a second family of CAT [], evolutionary unrelated to the main family described above. These CAT belong to the bacterial hexapeptide-repeat containing-transferases family (see IPR001451 from INTERPRO). The crystal structure of the type III enzyme from Escherichia coli with chloramphenicol bound has been determined. CAT is a trimer of identical subunits (monomer Mr 25,000) and the trimeric structure is stabilised by a number of hydrogen bonds, some of which result in the extension of a beta-sheet across the subunit interface. Chloramphenicol binds in a deep pocket located at the boundary between adjacent subunits of the trimer, such that the majority of residues forming the binding pocket belong to one subunit while the catalytically essential histidine belongs to the adjacent subunit. His195 is appropriately positioned to act as a general base catalyst in the reaction, and the required tautomeric stabilisation is provided by an unusual interaction with a main-chain carbonyl oxygen [].; GO: 0008811 chloramphenicol O-acetyltransferase activity; PDB: 1CIA_A 4CLA_A 1QCA_A 2CLA_A 1CLA_A 3CLA_A 3U9F_K 1PD5_F 1Q23_F 3U9B_F ....
Probab=74.25 E-value=3.7 Score=35.88 Aligned_cols=38 Identities=21% Similarity=0.371 Sum_probs=25.9
Q ss_pred CCcEEEE-EEEEecCCe---EEEEEeeeccccchHHHHHHHHHH
Q 042848 157 KAEVTAI-QITLFPNQG---FSICISVHHTVIDGKSAVLFIKSW 196 (339)
Q Consensus 157 ~~Pll~v-Qvt~f~~GG---~~L~~~~~H~v~Dg~g~~~fl~~W 196 (339)
..|.+.. |.+. .|| +-|++.+||+++||.=+..|++.+
T Consensus 164 ~~P~it~GK~~~--~~gr~~mPvsiqvhHa~~DG~Hv~~F~~~l 205 (206)
T PF00302_consen 164 SIPRITWGKYFE--ENGRLLMPVSIQVHHALVDGYHVGQFFEEL 205 (206)
T ss_dssp SS-EEEEE--EE--ETTEEEEEEEEEEETTT--HHHHHHHHHHH
T ss_pred cccEEEeeeeEe--ECCEEEEEEEEEEecccccHHHHHHHHHHh
Confidence 5687763 4333 355 788999999999999999999865
No 21
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
Probab=71.59 E-value=4.3 Score=39.40 Aligned_cols=29 Identities=34% Similarity=0.567 Sum_probs=27.0
Q ss_pred EEEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 173 FSICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 173 ~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
+-|++++||.++||.-+..|++.|.+..-
T Consensus 375 m~lslt~DHRviDG~~aa~Fl~~l~~~le 403 (411)
T PRK11856 375 MPLSLSFDHRVIDGADAARFLKALKELLE 403 (411)
T ss_pred EEEeEEeehhhcCcHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998875
No 22
>PRK11855 dihydrolipoamide acetyltransferase; Reviewed
Probab=65.87 E-value=6.2 Score=39.87 Aligned_cols=29 Identities=31% Similarity=0.462 Sum_probs=26.7
Q ss_pred EEEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 173 FSICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 173 ~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
+-|++++||.++||.-+..|++.|.+..-
T Consensus 512 m~lslt~DHRviDG~~aa~Fl~~l~~~le 540 (547)
T PRK11855 512 LPLSLSYDHRVIDGATAARFTNYLKQLLA 540 (547)
T ss_pred EEEeEEccchhcCcHHHHHHHHHHHHHHh
Confidence 55899999999999999999999998875
No 23
>PF00198 2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); InterPro: IPR001078 This domain is found in the lipoamide acyltransferase component of the branched-chain alpha-keto acid dehydrogenase complex 2.3.1 from EC, which catalyses the overall conversion of alpha-keto acids to acyl-CoA and carbon dioxide []. It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). The domain is also found in the dihydrolipoamide succinyltransferase component of the 2-oxoglutarate dehydrogenase complex 2.3.1.61 from EC. These proteins contain one to three copies of a lipoyl binding domain followed by the catalytic domain.; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1EAF_A 1EAA_A 1DPD_A 1EAE_A 1DPC_A 1EAB_A 1DPB_A 1EAC_A 1EAD_A 2II5_H ....
Probab=60.94 E-value=13 Score=33.07 Aligned_cols=30 Identities=30% Similarity=0.500 Sum_probs=26.2
Q ss_pred eEEEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 172 GFSICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 172 G~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
-+-|++++.|.+.||.-+..|++.+.+...
T Consensus 195 ~~~lslt~DHRvidG~~aa~Fl~~l~~~le 224 (231)
T PF00198_consen 195 VMNLSLTFDHRVIDGAEAARFLKDLKELLE 224 (231)
T ss_dssp EEEEEEEEETTTS-HHHHHHHHHHHHHHHH
T ss_pred EEEeEEeccceEEcHHHHHHHHHHHHHHHh
Confidence 356789999999999999999999999886
No 24
>PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated
Probab=55.08 E-value=13 Score=38.38 Aligned_cols=29 Identities=28% Similarity=0.385 Sum_probs=26.6
Q ss_pred EEEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 173 FSICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 173 ~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
+-|+++++|.+.||.-...|++.|.+..-
T Consensus 598 m~lslt~DHRviDGa~aa~Fl~~lk~~LE 626 (633)
T PRK11854 598 LPLSLSYDHRVIDGADGARFITIINDRLS 626 (633)
T ss_pred EEEeEEccchhcchHHHHHHHHHHHHHHh
Confidence 34899999999999999999999999876
No 25
>PRK11857 dihydrolipoamide acetyltransferase; Reviewed
Probab=53.15 E-value=15 Score=34.22 Aligned_cols=29 Identities=21% Similarity=0.298 Sum_probs=26.6
Q ss_pred EEEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 173 FSICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 173 ~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
+-|++++.|.|.||.-...|++.|.+..-
T Consensus 270 m~lslt~DHRviDGa~aa~Fl~~lk~~LE 298 (306)
T PRK11857 270 MHLTVAADHRWIDGATIGRFASRVKELLE 298 (306)
T ss_pred eEEeEecchhhhCcHHHHHHHHHHHHHhc
Confidence 45889999999999999999999999886
No 26
>PLN02528 2-oxoisovalerate dehydrogenase E2 component
Probab=52.38 E-value=16 Score=35.63 Aligned_cols=29 Identities=24% Similarity=0.610 Sum_probs=26.9
Q ss_pred EEEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 173 FSICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 173 ~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
+-|++++.|.|.||.-...||+.|.+..-
T Consensus 378 m~lslt~DHRviDGa~aa~Fl~~lk~~le 406 (416)
T PLN02528 378 MTVTIGADHRVLDGATVARFCNEWKSYVE 406 (416)
T ss_pred EEEeEeccchhcCcHHHHHHHHHHHHHHh
Confidence 45899999999999999999999999886
No 27
>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model represents one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria. Sequences from Gram-positive bacteria are not included. The non-enzymatic homolog protein X, which serves as an E3 component binding protein, falls within the clade phylogenetically but is rejected by its low score.
Probab=52.19 E-value=15 Score=35.93 Aligned_cols=29 Identities=34% Similarity=0.560 Sum_probs=26.9
Q ss_pred EEEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 173 FSICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 173 ~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
+-|++++.|.|.||.-...|++.|.++.-
T Consensus 400 m~lsls~DHRviDGa~aa~Fl~~lk~~lE 428 (435)
T TIGR01349 400 MSVTLSCDHRVIDGAVGAEFLKSFKKYLE 428 (435)
T ss_pred EEEeEeecchhhCcHHHHHHHHHHHHHHh
Confidence 45899999999999999999999999876
No 28
>PRK14843 dihydrolipoamide acetyltransferase; Provisional
Probab=49.98 E-value=17 Score=34.40 Aligned_cols=29 Identities=28% Similarity=0.549 Sum_probs=26.5
Q ss_pred EEEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 173 FSICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 173 ~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
+-|++++.|.+.||.-...|++.|.+..-
T Consensus 312 m~lsls~DHRviDGa~aa~Fl~~lk~~lE 340 (347)
T PRK14843 312 MSLGLTIDHRVVDGMAGAKFMKDLKELIE 340 (347)
T ss_pred EEEEEecchhhhCcHHHHHHHHHHHHHhc
Confidence 45899999999999999999999998875
No 29
>PTZ00144 dihydrolipoamide succinyltransferase; Provisional
Probab=49.34 E-value=18 Score=35.15 Aligned_cols=30 Identities=30% Similarity=0.500 Sum_probs=27.3
Q ss_pred eEEEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 172 GFSICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 172 G~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
-+-|++++.|.|.||.-...|++.|.++.-
T Consensus 380 ~m~lsLs~DHRviDGa~AA~FL~~lk~~LE 409 (418)
T PTZ00144 380 IMYLALTYDHRLIDGRDAVTFLKKIKDLIE 409 (418)
T ss_pred EEEEEEecchhhhChHHHHHHHHHHHHHhc
Confidence 356899999999999999999999998875
No 30
>COG4845 Chloramphenicol O-acetyltransferase [Defense mechanisms]
Probab=48.71 E-value=24 Score=30.61 Aligned_cols=45 Identities=11% Similarity=0.147 Sum_probs=32.1
Q ss_pred CCCcEEEE-EEEEecCCeE--EEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 156 DKAEVTAI-QITLFPNQGF--SICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 156 ~~~Pll~v-Qvt~f~~GG~--~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
...|++.. |.+. .+|-+ -|++..||+.+||.=+.+|++.+.....
T Consensus 165 ~~~PiF~~Grf~~-~~Gkl~lPlavq~hHA~vDG~Hi~~l~~~lQ~~~~ 212 (219)
T COG4845 165 YGQPIFYAGRFYE-EDGKLTLPLAVQAHHANVDGFHIGQLFDQLQTLFS 212 (219)
T ss_pred ccceeEeecceec-cCCeEEEeEEEEecccccchhhHHHHHHHHHHHhc
Confidence 46777754 2222 13433 3688899999999999999998887765
No 31
>TIGR01347 sucB 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component). dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase.
Probab=48.34 E-value=21 Score=34.60 Aligned_cols=29 Identities=34% Similarity=0.535 Sum_probs=26.7
Q ss_pred EEEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 173 FSICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 173 ~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
+-|++++.|.|.||.-...|++.|.++..
T Consensus 366 m~lsLt~DHRviDGa~aa~Fl~~l~~~le 394 (403)
T TIGR01347 366 MYLALSYDHRLIDGKEAVTFLVTIKELLE 394 (403)
T ss_pred EEEEEEecchhhChHHHHHHHHHHHHHhc
Confidence 34899999999999999999999999876
No 32
>PRK05704 dihydrolipoamide succinyltransferase; Validated
Probab=48.19 E-value=20 Score=34.78 Aligned_cols=29 Identities=34% Similarity=0.515 Sum_probs=26.6
Q ss_pred EEEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 173 FSICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 173 ~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
+-|++++.|.|.||.-...|++.|.++.-
T Consensus 370 ~~lsls~DHRviDGa~aa~Fl~~l~~~le 398 (407)
T PRK05704 370 MYLALSYDHRIIDGKEAVGFLVTIKELLE 398 (407)
T ss_pred EEEEEEechhhhCcHHHHHHHHHHHHHhh
Confidence 34899999999999999999999999886
No 33
>PLN02226 2-oxoglutarate dehydrogenase E2 component
Probab=44.50 E-value=23 Score=34.95 Aligned_cols=29 Identities=24% Similarity=0.552 Sum_probs=27.0
Q ss_pred EEEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 173 FSICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 173 ~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
+-|++++.|.|.||.-...|++.|.++.-
T Consensus 426 m~lsLs~DHRVIDGa~aA~FL~~lk~~LE 454 (463)
T PLN02226 426 MYVALTYDHRLIDGREAVYFLRRVKDVVE 454 (463)
T ss_pred EEEeEecchhhhCcHHHHHHHHHHHHHhc
Confidence 66899999999999999999999999875
No 34
>TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).
Probab=43.30 E-value=24 Score=36.02 Aligned_cols=28 Identities=21% Similarity=0.324 Sum_probs=26.4
Q ss_pred EEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 174 SICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 174 ~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
-|++++.|.|.||.-...|++.|.++.-
T Consensus 553 ~lsls~DHRviDGa~aa~Fl~~lk~~LE 580 (590)
T TIGR02927 553 HLPLTYDHQLIDGADAGRFLTTIKDRLE 580 (590)
T ss_pred EEeeeccchhcCcHHHHHHHHHHHHHHh
Confidence 4899999999999999999999999886
No 35
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model.
Probab=42.93 E-value=26 Score=35.42 Aligned_cols=28 Identities=29% Similarity=0.348 Sum_probs=26.1
Q ss_pred EEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 174 SICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 174 ~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
-|++++.|.|.||.-...|++.|.++.-
T Consensus 512 ~ltls~DHRviDGa~aa~Fl~~~~~~le 539 (546)
T TIGR01348 512 PLSLSYDHRVIDGADAARFTTYICESLA 539 (546)
T ss_pred EEeEeccchhcChHHHHHHHHHHHHHHh
Confidence 3899999999999999999999999876
No 36
>PLN02744 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
Probab=39.49 E-value=30 Score=34.90 Aligned_cols=29 Identities=28% Similarity=0.483 Sum_probs=26.7
Q ss_pred EEEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 173 FSICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 173 ~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
+-|++++.|.|.||.-...|++.|.+..-
T Consensus 504 m~lsLs~DHRvIDGa~AA~FL~~lk~~LE 532 (539)
T PLN02744 504 MSVTLSCDHRVIDGAIGAEWLKAFKGYIE 532 (539)
T ss_pred eEEeEecchhhhCcHHHHHHHHHHHHHhc
Confidence 55899999999999999999999998875
No 37
>KOG0558 consensus Dihydrolipoamide transacylase (alpha-keto acid dehydrogenase E2 subunit) [Energy production and conversion]
Probab=30.24 E-value=56 Score=30.76 Aligned_cols=29 Identities=28% Similarity=0.508 Sum_probs=25.6
Q ss_pred EEEEEeeeccccchHHHHHHHHHHHHHHH
Q 042848 173 FSICISVHHTVIDGKSAVLFIKSWAYLCK 201 (339)
Q Consensus 173 ~~L~~~~~H~v~Dg~g~~~fl~~Wa~~~r 201 (339)
+-+.++..|.|.||..+..|-..|-+..-
T Consensus 436 M~VswsADHRViDGaTmarFsn~WK~YlE 464 (474)
T KOG0558|consen 436 MMVSWSADHRVIDGATMARFSNQWKEYLE 464 (474)
T ss_pred EEEEeecCceeeccHHHHHHHHHHHHHhh
Confidence 34678889999999999999999998875
No 38
>KOG1212 consensus Amidases [Translation, ribosomal structure and biogenesis; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=27.12 E-value=54 Score=33.12 Aligned_cols=36 Identities=14% Similarity=0.128 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHhcC
Q 042848 277 TREDLNKLKHKLVLVNKDQHPSKQLHSSTFVLTCAHVFVCLVKARG 322 (339)
Q Consensus 277 s~~~l~~LK~~a~~~~~~~~~~~~~~~St~dal~A~iW~~i~rAr~ 322 (339)
.+..+.+|++++.+ ..+|.+++|+|++||++..-+.
T Consensus 53 l~~~~~~L~~~L~~----------~e~~~~~vl~Ay~~Ra~~vn~~ 88 (560)
T KOG1212|consen 53 LKLDATELAQALQS----------GELTSVEVLCAYCHRAIEVNQK 88 (560)
T ss_pred hhcCHHHHHHHHHh----------CcCcHHHHHHHHHHHHHHhccC
Confidence 34455667777664 2499999999999999876654
Done!