Query 042851
Match_columns 453
No_of_seqs 271 out of 1763
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 10:12:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042851.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042851hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00845 caca sodium/calcium 100.0 1.9E-70 4.1E-75 603.0 29.0 224 227-453 696-925 (928)
2 KOG1307 K+-dependent Ca2+/Na+ 100.0 4.5E-67 9.8E-72 530.5 15.4 401 5-453 93-582 (588)
3 KOG1306 Ca2+/Na+ exchanger NCX 100.0 1.5E-64 3.2E-69 515.3 11.7 441 1-453 77-596 (596)
4 TIGR00927 2A1904 K+-dependent 100.0 1.2E-56 2.6E-61 486.8 24.2 180 259-453 906-1090(1096)
5 PRK10734 putative calcium/sodi 100.0 3.4E-49 7.3E-54 399.9 21.7 283 4-446 35-317 (325)
6 COG0530 ECM27 Ca2+/Na+ antipor 100.0 5.7E-48 1.2E-52 389.4 21.9 276 5-447 43-319 (320)
7 TIGR00367 K+-dependent Na+/Ca+ 100.0 3.8E-44 8.1E-49 360.8 20.9 273 4-441 34-307 (307)
8 PLN03151 cation/calcium exchan 100.0 8.5E-40 1.8E-44 354.8 25.9 416 5-453 176-644 (650)
9 TIGR00846 caca2 calcium/proton 100.0 1.1E-39 2.3E-44 335.4 18.8 284 9-444 69-363 (365)
10 TIGR00378 cax calcium/proton e 100.0 3.9E-38 8.4E-43 322.3 22.4 289 3-443 46-346 (349)
11 KOG2399 K+-dependent Na+:Ca2+ 99.9 2.5E-25 5.3E-30 238.9 25.3 408 4-452 139-604 (605)
12 PRK10734 putative calcium/sodi 99.9 7.4E-24 1.6E-28 215.0 14.1 138 286-447 8-145 (325)
13 COG0530 ECM27 Ca2+/Na+ antipor 99.9 5.9E-22 1.3E-26 200.5 13.5 142 285-450 14-155 (320)
14 TIGR00367 K+-dependent Na+/Ca+ 99.9 1.1E-21 2.4E-26 197.8 14.6 142 285-450 6-147 (307)
15 TIGR00927 2A1904 K+-dependent 99.8 3.7E-21 8.1E-26 210.9 12.3 135 293-449 472-606 (1096)
16 PF01699 Na_Ca_ex: Sodium/calc 99.8 2.1E-19 4.6E-24 159.2 7.3 137 292-445 2-140 (140)
17 TIGR00378 cax calcium/proton e 99.7 8.2E-18 1.8E-22 172.6 11.7 139 284-447 20-173 (349)
18 TIGR00846 caca2 calcium/proton 99.7 1.1E-17 2.3E-22 172.6 10.1 139 284-447 38-190 (365)
19 PLN03151 cation/calcium exchan 99.7 5.4E-17 1.2E-21 177.2 15.1 134 294-447 156-289 (650)
20 KOG1307 K+-dependent Ca2+/Na+ 99.6 1.2E-15 2.6E-20 156.6 5.7 130 296-447 75-204 (588)
21 PF01699 Na_Ca_ex: Sodium/calc 99.6 3.4E-15 7.5E-20 132.2 6.0 113 3-124 22-139 (140)
22 TIGR00845 caca sodium/calcium 99.4 1.1E-13 2.5E-18 154.4 8.0 61 4-68 786-846 (928)
23 KOG1397 Ca2+/H+ antiporter VCX 99.4 7.3E-12 1.6E-16 127.0 19.8 286 10-442 129-430 (441)
24 COG0387 ChaA Ca2+/H+ antiporte 99.3 3E-10 6.5E-15 115.7 20.8 138 288-446 228-365 (368)
25 PRK10599 calcium/sodium:proton 99.1 4.5E-09 9.8E-14 108.1 19.9 137 288-446 229-365 (366)
26 KOG2399 K+-dependent Na+:Ca2+ 98.6 6.6E-08 1.4E-12 105.1 5.5 131 295-447 121-251 (605)
27 KOG1306 Ca2+/Na+ exchanger NCX 97.6 2.1E-05 4.7E-10 82.6 1.7 58 5-66 459-516 (596)
28 KOG1397 Ca2+/H+ antiporter VCX 97.1 0.0082 1.8E-07 62.1 12.7 84 285-372 98-181 (441)
29 COG0387 ChaA Ca2+/H+ antiporte 97.0 0.0081 1.8E-07 62.0 12.0 153 284-448 37-189 (368)
30 PRK10599 calcium/sodium:proton 96.3 0.0055 1.2E-07 63.6 5.6 111 4-126 254-365 (366)
31 PRK14750 kdpF potassium-transp 28.5 93 0.002 20.6 3.1 23 106-128 3-25 (29)
32 PF08370 PDR_assoc: Plant PDR 22.0 56 0.0012 25.8 1.5 26 42-67 31-57 (65)
No 1
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=100.00 E-value=1.9e-70 Score=603.05 Aligned_cols=224 Identities=35% Similarity=0.634 Sum_probs=204.3
Q ss_pred cchhhhhhhhhhcccCchh----hhhhhhhHHHHHHHHHHhhhhhhhheeecCCccccchhHHHHHHHHHHHHHHHHHHH
Q 042851 227 HALWKQQFVDSIALESPES----RKMNNIYLRLARIFWQSLLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTK 302 (453)
Q Consensus 227 ~~~w~~~~~~a~~~~~~~~----~~~~~~~~~~~~~~~~~l~~p~~~~~~~vpp~~~~~~~~~f~~~i~~i~~~s~~lv~ 302 (453)
+++|+|||+||+++++.++ +..++..|+|.++++|++++|||++|+++||++..++|++|+++++||++.++.+++
T Consensus 696 t~~w~~qf~~a~t~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~~wk~lfa~vPP~~~~~g~~~f~~sI~~Ig~l~~~i~~ 775 (928)
T TIGR00845 696 THSWREQFIEAITVSAGDDDDDDEDGEEKLPSCFDYVMHFLTVFWKVLFAFVPPTEYWGGWACFVVSILMIGVLTAFIGD 775 (928)
T ss_pred cchHHHHhhheEEeccCCcccccccccccCchHHHHHHHHHHhHHHhEEeecCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999977531 223446788999999999999999999999999889999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcC-CCCceeehhccchhhHHHhhhhHHHHHHhhhccccccc
Q 042851 303 LTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQI-TADSAIANITCSNSVNIYVGIGIPWLIDTAYNFIVYKE 381 (453)
Q Consensus 303 ~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g-~~diAigNiiGSNifNillvLGl~~li~~~~~~~~~~~ 381 (453)
+++.+||.+|+|+.++|+|++|+|||+||+++|++|| +|| ++|||+||++|||+||++++||+||+++.+|+.. .+.
T Consensus 776 ~a~~ig~~~gi~~~viGlt~vA~GTSlPEl~~S~~aA-~~~~~~d~aigNv~GSNifNi~l~lGv~~~i~~~~~~~-~~~ 853 (928)
T TIGR00845 776 LASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAA-TQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHAA-NGT 853 (928)
T ss_pred HHHHHHHHcCCCHHhhhheeeeEecCcHHHHHHHHHH-HcCCCCceeEEeecchHHHHHHHHHHHHHHHhhhhhcc-cCc
Confidence 9999999999999999999999999999999999999 565 5999999999999999999999999999887653 467
Q ss_pred cEEEecCCCchhHHHHHHHHHHHHHHHHHHhCC-cccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 042851 382 PLRVQNAEGLSFSLLVFFCTSVGCIAVLVLRRL-TLGAELGGPKLWAWVTSVYFMLLWIIFVVLSSLKVSGII 453 (453)
Q Consensus 382 pi~v~~~~~l~~~~~~l~~~~~l~~~~~~~~~~-~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~~~l~~~~~~ 453 (453)
|+.+++. .+.+++++|++++++++.++.+||+ .++.+.|||+.+||+++.+++.+|++|+++++|++||||
T Consensus 854 ~~~V~~~-~l~~~v~l~~~~a~l~~~vl~~rr~~~~g~elggp~~~~~~~~~~~~~lw~~y~~~s~l~ay~~i 925 (928)
T TIGR00845 854 QFKVSPG-TLAFSVTLFTIFAFICIGVLLYRRRPEIGGELGGPRTAKLLTSALFVLLWLLYILFSSLEAYCHI 925 (928)
T ss_pred eEEECcc-chhHHHHHHHHHHHHHHHHHHHhhcccccceeCCCCCcchhhhHHHHHHHHHHHHHHHHHHhcCc
Confidence 8999875 8999999999988888777766664 799999999999999999999999999999999999986
No 2
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-67 Score=530.49 Aligned_cols=401 Identities=24% Similarity=0.398 Sum_probs=275.1
Q ss_pred CcccccceeeeccCChhHHHHHHHHHHhhccccCCCCccchhhhhhhhhhhHhHhhhheecccccccccccccchhhHHH
Q 042851 5 GITPSDIALLAFGTSFPQISLATIDAIRSIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVEL 84 (453)
Q Consensus 5 ~~~VaGlTivA~GTSaPEL~vSiia~~~~~~~~~~~digvGnIVGS~IfNillIlGl~al~~p~~~~~~~~~~~~~~~~~ 84 (453)
+++||||||||.|+||||||+|++++|- .++|+|+||||||++||||+|+|+|+|++. ++.++.|||+
T Consensus 93 SdDVAGATFMAAGgSAPElFTSvIGVFI-----t~~dVGiGTIVGSAvFNIL~Vig~C~LFSr-----qvl~LtWWPL-- 160 (588)
T KOG1307|consen 93 SDDVAGATFMAAGGSAPELFTSVIGVFI-----TQGDVGIGTIVGSAVFNILCVIGVCGLFSR-----QVLNLTWWPL-- 160 (588)
T ss_pred cccccchhhhhccCCchHHhhhheeEEE-----ecCCcceeeeeehhhhhHHHHHHHHHhhcc-----cccccccchh--
Confidence 6899999999999999999999999984 899999999999999999999999999985 6789999999
Q ss_pred HHHHHHHHHH-HHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHhhccCccccccc-ccc----------CCCCC-----
Q 042851 85 FWSFWAYVWL-YIILEVWTPNVITFWEALLTVLQYGLLLIHAYAQDKRWPYLSLPI-ART----------ERPED----- 147 (453)
Q Consensus 85 ~~~~~~y~~~-~ill~~~~dg~i~~~Eg~ill~~~~~yl~~~~~~~k~~~~~~~~~-~~~----------~~~~~----- 147 (453)
+||+.+|.+. +.++.+++|+.|.|||+++|+.+|+.|+++|-++. +.....+++ .|+ .+|.+
T Consensus 161 fRD~sfY~lsl~~Li~Ff~D~~I~WwEaL~L~~~Yi~Yv~~MKfN~-~ie~~vk~~~~rn~v~v~a~~~~~~~~~~~~Aa 239 (588)
T KOG1307|consen 161 FRDVSFYTLSLIMLIYFFLDELIMWWEALALLLMYISYVVFMKFNG-QIEQLVKKMLKRNKVNVLANGAEIKPGKNEDAA 239 (588)
T ss_pred hhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHheeeehhh-HHHHHHHHHhccCcceecccccccCCcccchhh
Confidence 8899999884 45667889999999999999999999999885543 111000000 000 00000
Q ss_pred ----CCccccCCC--------------CCCCCccccccc-----------cc-------------cc-------cccCcc
Q 042851 148 ----WVPQETTSC--------------KDENCDYDECSE-----------IL-------------QL-------GEDENR 178 (453)
Q Consensus 148 ----~~~~~~~~~--------------~~~~~~~~~~~~-----------~~-------------~~-------~~~~~~ 178 (453)
.++.....+ .+...+.++..+ .. +. ..+++.
T Consensus 240 ~~~~~~~~~a~~p~~~~~~~~~i~ql~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~~k~ 319 (588)
T KOG1307|consen 240 AELLDKSNAADLPHHNSASRNSIAQLMSGDPDPLSESAGLRIMISGHTPPNGRTQEKSRTLLQLPARLDNEDDNENGEKA 319 (588)
T ss_pred hhhhccCccccccccchhhHhHHHHHhcCCCccchhhccCcccccCCCCCCCchhhhhhhhhhccccccccccccccccc
Confidence 000000000 000000000000 00 00 000000
Q ss_pred cc--eeeeeccCCC---CcccC--CccccCCC-Ccchhhhhh-----hhhhhh----cccCCc-cccchhhhhhhhhhcc
Q 042851 179 GV--VDIFSIHSPN---GAVTS--PLYQKVPG-SEDVAEISK-----ESFREE----INSELP-HVHALWKQQFVDSIAL 240 (453)
Q Consensus 179 ~~--~~~~~~~~~~---~~~~~--~~~~~~~~-~~~~~~~~~-----~~~~~~----~~~~~~-~~~~~w~~~~~~a~~~ 240 (453)
.+ +++-+.+..+ ..... ..-++++. ++++++.+. +.++++ +.++++ +..-.|
T Consensus 320 ~~~~i~~~~~h~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~e~~e~pl~~~w---------- 389 (588)
T KOG1307|consen 320 VNIKIDIGDTHELDITGPNSGGRTSDVERIDVSDEEEEEAENENEDNEEFEEEQESEEEEPEEEPLSFDW---------- 389 (588)
T ss_pred ccccccccccceecccCCCCCcccCccccCCccccccchhcccCCCCcchhhcchhhhccccCCCcCCCC----------
Confidence 00 0110000000 00000 00000000 000000000 000000 000010 111122
Q ss_pred cCchhhhhhhhhHHHHHHHHHHhhhhhhhh-eeecCCcccc--chh--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCh
Q 042851 241 ESPESRKMNNIYLRLARIFWQSLLVPWRVL-FAFVPPYHIA--HGW--IAFICSLIFISGIAYIVTKLTDIISCVTGINA 315 (453)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~-~~~vpp~~~~--~~~--~~f~~~i~~i~~~s~~lv~~a~~ia~~~gis~ 315 (453)
|+.+. |+..| .+.+|+.+. ..++||+|++ |+| ++|+.+++||+..||+|||+|.++|+.+|||+
T Consensus 390 --P~~~~--------k~l~y-~~~~Pi~fpLw~TvPdvrkp~~rkfF~vTFigSIlWIA~fSYLMVWwa~~iGeT~gIp~ 458 (588)
T KOG1307|consen 390 --PETKR--------KRLTY-AFLAPIVFPLWLTVPDVRKPRSRKFFPVTFIGSILWIAAFSYLMVWWANIIGETLGIPD 458 (588)
T ss_pred --ccchh--------heeee-EEEeeeeeeEEEecCCcCCccccceeehHHHHHHHHHHHHHHHHHHHHHHcccccCCCH
Confidence 22211 34444 577888875 5569999997 456 89999999999999999999999999999999
Q ss_pred hhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhhhHHHHHHhhhccccccccEEEecCCCchhHH
Q 042851 316 YVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYNFIVYKEPLRVQNAEGLSFSL 395 (453)
Q Consensus 316 ~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvLGl~~li~~~~~~~~~~~pi~v~~~~~l~~~~ 395 (453)
.+||+|++|+|||+||++||++.| |||.+|||++|-+|||+|+|+++||+||+++.+..++ +.++.++++ .+.+++
T Consensus 459 eIMGLTiLAAGTSIPDlitSvIVA-RKGlGDMAVSsSiGSNiFDI~VGLplPWLL~~lI~~~--~~~i~vsS~-GL~csi 534 (588)
T KOG1307|consen 459 EIMGLTILAAGTSIPDLITSVIVA-RKGLGDMAVSSSIGSNIFDILVGLPLPWLLYTLIYGF--KSKISVSSN-GLVCSI 534 (588)
T ss_pred HHhhhhhhhcCCchHHhhHhhhhc-ccccccceeecccccchhheeecCCcHHHHHHHHhhc--CCceeecCC-ceehHH
Confidence 999999999999999999999999 9999999999999999999999999999999987543 345999987 899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 042851 396 LVFFCTSVGCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVVLSSLKVSGII 453 (453)
Q Consensus 396 ~~l~~~~~l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~~~l~~~~~~ 453 (453)
.+++++.++++..+..+|||++|..| ++++++|++|++++++.|++++
T Consensus 535 ~lLf~ml~v~v~~ia~~rWrMnK~lG----------~~m~llY~~Fl~~svmlE~~v~ 582 (588)
T KOG1307|consen 535 GLLFAMLIVLVLGIALSRWRMNKILG----------FLMILLYFVFLIISVMLETDVL 582 (588)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccchh----------HHHHHHHHHHHHhhhheeccee
Confidence 99998888877777789999999999 8999999999999999998764
No 3
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-64 Score=515.33 Aligned_cols=441 Identities=40% Similarity=0.673 Sum_probs=333.5
Q ss_pred CcccCcccccceeeeccCChhHHHHHHHHHHhhccccCCCCccchhhhhhhhhhhHhHhhhheecccccccccccccchh
Q 042851 1 MKRCGITPSDIALLAFGTSFPQISLATIDAIRSIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVW 80 (453)
Q Consensus 1 ~~~~~~~VaGlTivA~GTSaPEL~vSiia~~~~~~~~~~~digvGnIVGS~IfNillIlGl~al~~p~~~~~~~~~~~~~ 80 (453)
+|+||++|+++|+||+|||+||+.+|++..-++ .++++|+|+||||||+.||.+.|+++|....|.++.||+.+++++
T Consensus 77 vriWNeTVsnltLmAlGsSaPEIlLSiIe~~gn--~f~agdLGPgTIVGSAAfnlF~iiAVCv~vip~Ge~rki~~lrVf 154 (596)
T KOG1306|consen 77 VRVWNETVSNLTLMALGSSAPEILLSIIEFCGN--EFQAGDLGPGTIVGSAAFNLFEIIAVCVRVIPAGELRKIFHLRVF 154 (596)
T ss_pred EEEechhhHHHHHhhcccCcchhhHHHHHHhcc--cccccCcCCceEechhhhhhhhheEEEEEEcCCcccccccCceEE
Confidence 589999999999999999999999999999987 678899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHhhccCccccccccccCCCCCC------------
Q 042851 81 LVELFWSFWAYVWLYIILEVWTPNVITFWEALLTVLQYGLLLIHAYAQDKRWPYLSLPIARTERPEDW------------ 148 (453)
Q Consensus 81 ~~~~~~~~~~y~~~~ill~~~~dg~i~~~Eg~ill~~~~~yl~~~~~~~k~~~~~~~~~~~~~~~~~~------------ 148 (453)
.+++.|+.++|+|+++++.++++|.++.|||++++.+|++-+.+.|.++|++.+......+..+++++
T Consensus 155 ~VtA~ws~fAYiWLyliLsV~sPnvv~vwEallT~~ffp~~vv~ayaad~r~~f~~~v~~~~d~p~~~~d~A~y~V~~~~ 234 (596)
T KOG1306|consen 155 FVTADWSIFAYIWLYLILSVFSPNVVYVWEALLTLLFFPLVVVSAYAADKRALFYSSVQKPGDHPEDEVDEAEYHVLESQ 234 (596)
T ss_pred EEEeeHHHHHHHHHhheeEeccCCeeEEeehhhhHhhhhhhhhHHHHHhhhhheeeccCCCCCChhhhhhHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999998776442111111111110
Q ss_pred -------------------Cccc--cCCCCCCC---------CccccccccccccccCcccce--eeee---ccC-----
Q 042851 149 -------------------VPQE--TTSCKDEN---------CDYDECSEILQLGEDENRGVV--DIFS---IHS----- 188 (453)
Q Consensus 149 -------------------~~~~--~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~----- 188 (453)
+..+ +...++++ .+|+-.++..++.|+++++.. ++.+ +++
T Consensus 235 ~ksrafyriqaTr~m~gsg~~~r~d~r~g~~y~TedgsA~AgtDyv~~egtl~F~PG~~~q~~~V~IiDddife~dEv~i 314 (596)
T KOG1306|consen 235 RKSRAFYRIQATRLMQGSGNAVRTDERDGGDYKTEDGSAEAGTDYVGIEGTLDFAPGVRMQTFQVGIIDDDIFEEDEVTI 314 (596)
T ss_pred hhceeeEEeeeeeccccccceeeeccccCCccccccccccccCceeeeecccccCCCccceeEEEEEEcccCCCccceee
Confidence 0000 00000000 011111122345566554332 2211 111
Q ss_pred ---CC----------Cccc-------C------CccccCCCC-cchhhhhhhhhhhhcccCCccccchhhhhhhhhhccc
Q 042851 189 ---PN----------GAVT-------S------PLYQKVPGS-EDVAEISKESFREEINSELPHVHALWKQQFVDSIALE 241 (453)
Q Consensus 189 ---~~----------~~~~-------~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~a~~~~ 241 (453)
++ +.++ + ..|++.+.+ ++. |+.+. ++.+.+ --..|+-++.|+-..+
T Consensus 315 ~ddDhag~f~f~~~~G~~~~~v~RtsGargtv~vpy~Tv~~Ta~~~-e~~~G----~~ye~~--~iei~~v~i~e~~~fK 387 (596)
T KOG1306|consen 315 LDDDHAGIFLFQMPMGAVLGEVNRTSGARGTVIVPYQTVCGTAKGG-EDKKG----KEYEDE--FIEILEVIIEESYEFK 387 (596)
T ss_pred cCCCcceeEEeeccccceeeeeeeccccccceeeeeeeccCCCCCC-ccccc----cccccc--eeEEEEEEEeeceeee
Confidence 10 0000 0 124444332 111 11110 000000 0011222332222211
Q ss_pred CchhhhhhhhhHHHHHHHHHHhhhhhhhheeecCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhh
Q 042851 242 SPESRKMNNIYLRLARIFWQSLLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFT 321 (453)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~vpp~~~~~~~~~f~~~i~~i~~~s~~lv~~a~~ia~~~gis~~viGlT 321 (453)
.- +..+.+...+...-.||++++|||++|+++|||.+..||.+|++++++|++.+.++.|.|+.++|..|+.|+|.++|
T Consensus 388 ~~-dkl~~n~~l~~gt~sWH~l~~~WK~lFAfvPPt~~~~Gw~cFvvsi~~Igl~ta~igd~as~fgC~vglkdsVtA~~ 466 (596)
T KOG1306|consen 388 NT-DKLMKNLALVVGTSSWHFLTVPWKVLFAFVPPTEICHGWACFVVSILFIGLLTAVIGDLASHFGCTVGLKDSVTAVT 466 (596)
T ss_pred hh-hhhhhceeEEeecchhHHHHHHHHHHeeeCCchhhcCccHHHHHHHHHHHHHHHHHHHHHHhhceeecCccceeeee
Confidence 11 00111111111233689999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhhhHHHHHHhhhccccccccEEEecCCCchhHHHHHHHH
Q 042851 322 ALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYNFIVYKEPLRVQNAEGLSFSLLVFFCT 401 (453)
Q Consensus 322 ivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvLGl~~li~~~~~~~~~~~pi~v~~~~~l~~~~~~l~~~ 401 (453)
+||.|||+||+++|.+||.++..+|-++||+.|||..|+++++|+||.|+++||. .+|.|+.+++. .+.|++.++.+.
T Consensus 467 ~vA~GTS~PDtfASkiAA~~d~~AD~~igNvTgSNaVNvflGiG~aW~iaavy~a-~~g~~f~v~~g-~l~FsvtlF~i~ 544 (596)
T KOG1306|consen 467 FVALGTSVPDTFASKIAAEQDQTADASIGNVTGSNAVNVFLGIGLAWSIAAVYWA-AQGEPFYVEAG-TLAFSVTLFTIF 544 (596)
T ss_pred eehhcCCCcHHHHHHHHHhhcccccccccceecccceeEEEeccHHHHHHHHHHH-hcCceEEeccc-eeeeehHHHHHH
Confidence 9999999999999999997777899999999999999999999999999999975 46789999984 899999999999
Q ss_pred HHHHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 042851 402 SVGCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVVLSSLKVSGII 453 (453)
Q Consensus 402 ~~l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~~~l~~~~~~ 453 (453)
+++++.++.+||..++.++|||+.+|++++.++..+|++|+.+++|++|++|
T Consensus 545 s~~~i~vl~~RR~~iggELGGP~~~k~~ta~~fv~lW~~yv~~s~leay~~i 596 (596)
T KOG1306|consen 545 SVVCIVVLVYRRPHIGGELGGPRGWKLLTAALFVSLWLLYVLLSSLEAYCVI 596 (596)
T ss_pred HHHhheeeEEeccccCcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9998887777888899999999999999999999999999999999999986
No 4
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=100.00 E-value=1.2e-56 Score=486.82 Aligned_cols=180 Identities=27% Similarity=0.447 Sum_probs=158.1
Q ss_pred HHHHhhhhhhhhee-ecCCcccc--chh--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHH
Q 042851 259 FWQSLLVPWRVLFA-FVPPYHIA--HGW--IAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLV 333 (453)
Q Consensus 259 ~~~~l~~p~~~~~~-~vpp~~~~--~~~--~~f~~~i~~i~~~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~ 333 (453)
++|++.+||.+++. ++|||+++ ++| ++|++|++||++.+++++++++.+|+.+|||+.++|+||+|+|||+||++
T Consensus 906 ~~wvl~~Pi~~~l~~TIPDcrk~~~~k~y~ltFi~SIiwIsi~SyilV~~at~IG~vlGIse~VmGlTfLA~GTSIPDli 985 (1096)
T TIGR00927 906 AIYLFLLPIVFPLWLTVPDVRRQEARKFFVITFLGSIMWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLI 985 (1096)
T ss_pred eEeEEecchhheeeeecCCCCcccccceeeehHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhhhhhhhhhhcccHHHH
Confidence 44569999999755 59999986 467 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceeehhccchhhHHHhhhhHHHHHHhhhccccccccEEEecCCCchhHHHHHHHHHHHHHHHHHHhC
Q 042851 334 ASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYNFIVYKEPLRVQNAEGLSFSLLVFFCTSVGCIAVLVLRR 413 (453)
Q Consensus 334 tSi~aa~~~g~~diAigNiiGSNifNillvLGl~~li~~~~~~~~~~~pi~v~~~~~l~~~~~~l~~~~~l~~~~~~~~~ 413 (453)
+|+.+| ++|++|||+||++|||+|||++++|+||+++..++. ..++.+++. .+.+++.+++.+.++++..+.+++
T Consensus 986 sSvivA-rkG~gdMAVan~iGSNIFnIllgLGlPWlI~~li~g---~~pV~V~S~-GL~~sI~LLF~~LlflissI~l~k 1060 (1096)
T TIGR00927 986 TSVIVA-RKGLGDMAVSSSVGSNIFDITVGLPVPWLLFSLING---LQPVPVSSN-GLFCAIVLLFLMLLFVISSIASCK 1060 (1096)
T ss_pred HHHHHH-HccCCcceeeeccccchheeeeeccHHHHHHHHhcc---CcceeecCc-cHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999 899999999999999999999999999999887642 367888876 776666666555444444444688
Q ss_pred CcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 042851 414 LTLGAELGGPKLWAWVTSVYFMLLWIIFVVLSSLKVSGII 453 (453)
Q Consensus 414 ~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~~~l~~~~~~ 453 (453)
++++|..| ++++++|++|++++++.++++|
T Consensus 1061 wrL~R~lG----------ivlLvlYvvFLV~aiLiE~~ii 1090 (1096)
T TIGR00927 1061 WRMNKILG----------FTMFLLYFVFLIISVMLEDRII 1090 (1096)
T ss_pred eEEechHH----------HHHHHHHHHHHHHHHHHhcceE
Confidence 99999999 8999999999999999999875
No 5
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=100.00 E-value=3.4e-49 Score=399.89 Aligned_cols=283 Identities=19% Similarity=0.243 Sum_probs=211.9
Q ss_pred cCcccccceeeeccCChhHHHHHHHHHHhhccccCCCCccchhhhhhhhhhhHhHhhhheecccccccccccccchhhHH
Q 042851 4 CGITPSDIALLAFGTSFPQISLATIDAIRSIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVE 83 (453)
Q Consensus 4 ~~~~VaGlTivA~GTSaPEL~vSiia~~~~~~~~~~~digvGnIVGS~IfNillIlGl~al~~p~~~~~~~~~~~~~~~~ 83 (453)
.||.++|+|++|+|||+||+++|+.|+++ +++|+|+||++|||+||+++++|+++++.|...+++..+++.
T Consensus 35 is~~viG~tiva~gTSlPEl~vsv~A~~~-----g~~~ia~GnilGSni~ni~lilg~~~l~~~~~~~~~~~~~~~---- 105 (325)
T PRK10734 35 IPPLIIGMTVVGIGTSLPEIIVSVAASLH-----GQRDLAVGTALGSNITNILLILGLAALIRPFTVHSDVLRREL---- 105 (325)
T ss_pred CCHHHHHHHHHHHHcchhHHHHHHHHHHc-----CCCcchhhhhhhHHHHHHHHHHHHHHHhCCcccChHHHHHHH----
Confidence 58899999999999999999999999997 799999999999999999999999999998654443322221
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHhhccCccccccccccCCCCCCCccccCCCCCCCCcc
Q 042851 84 LFWSFWAYVWLYIILEVWTPNVITFWEALLTVLQYGLLLIHAYAQDKRWPYLSLPIARTERPEDWVPQETTSCKDENCDY 163 (453)
Q Consensus 84 ~~~~~~~y~~~~ill~~~~dg~i~~~Eg~ill~~~~~yl~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (453)
..+. ....++..+..|+.++|+||++++++|++|+++.++..|+ .+++ .
T Consensus 106 ---~~ll-~~~~~~~~~~~~~~l~~~~g~~ll~~~~~yl~~~~~~~~~----------~~~~---------------~-- 154 (325)
T PRK10734 106 ---PLML-LVSVLAGSVLYDGQLSRSDGIFLLLLAVLWLLFIVKIARL----------AERQ---------------G-- 154 (325)
T ss_pred ---HHHH-HHHHHHHHHHHCCcCcHHHHHHHHHHHHHHHHHHHHHHHh----------cccc---------------c--
Confidence 1111 1112222345789999999999999999999998865421 0000 0
Q ss_pred ccccccccccccCcccceeeeeccCCCCcccCCccccCCCCcchhhhhhhhhhhhcccCCccccchhhhhhhhhhcccCc
Q 042851 164 DECSEILQLGEDENRGVVDIFSIHSPNGAVTSPLYQKVPGSEDVAEISKESFREEINSELPHVHALWKQQFVDSIALESP 243 (453)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~a~~~~~~ 243 (453)
+ + + .++++.+ +.+ +
T Consensus 155 ----~--------------------~----------~----~~~~~~~-----------~~~-----------------~ 168 (325)
T PRK10734 155 ----N--------------------D----------S----LTREQLA-----------ELP-----------------R 168 (325)
T ss_pred ----c--------------------c----------c----cchhhhc-----------ccc-----------------c
Confidence 0 0 0 0000000 000 0
Q ss_pred hhhhhhhhhHHHHHHHHHHhhhhhhhheeecCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhhh
Q 042851 244 ESRKMNNIYLRLARIFWQSLLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTAL 323 (453)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~vpp~~~~~~~~~f~~~i~~i~~~s~~lv~~a~~ia~~~gis~~viGlTiv 323 (453)
++.. .+..+| +..+++++..+|++++++++.+|+.+|+||.++|+|++
T Consensus 169 ~~~~-------~~~~~~-------------------------l~~g~~~l~~gs~~lv~~~~~ia~~lgis~~~iG~tiv 216 (325)
T PRK10734 169 EGGL-------PVAFLW-------------------------LGIALIIMPMATRMVIDNATVLANYFAISELTIGLTVI 216 (325)
T ss_pred cccH-------HHHHHH-------------------------HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHH
Confidence 0000 012222 34577888889999999999999999999999999999
Q ss_pred hcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhhhHHHHHHhhhccccccccEEEecCCCchhHHHHHHHHHH
Q 042851 324 ASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYNFIVYKEPLRVQNAEGLSFSLLVFFCTSV 403 (453)
Q Consensus 324 A~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvLGl~~li~~~~~~~~~~~pi~v~~~~~l~~~~~~l~~~~~ 403 (453)
|+|||+||+++|+.++ |||+.|+|+||++|||+||+++++|+|+++ .|..+.++ .+..|.+.|+.+++
T Consensus 217 a~gtslPE~~~sv~a~-~~g~~~~avgniiGsnifni~~~lg~~~l~----------~~~~v~~~-~~~~~~~~~~~~~~ 284 (325)
T PRK10734 217 AIGTSLPELATAIAGA-RKGENDIAVGNIIGSNIFNIVIVLGLPALI----------SPGEINPL-AFSRDYWVMLLVSV 284 (325)
T ss_pred HHhccHHHHHHHHHHH-HcCCCchHHHHHHhHHHHHHHHHHHHHHhh----------ccccccch-hHHHHHHHHHHHHH
Confidence 9999999999999999 899999999999999999999999999999 45555443 56677777766665
Q ss_pred HHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHHHHHH
Q 042851 404 GCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVVLSS 446 (453)
Q Consensus 404 l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~~~ 446 (453)
+++.....+|+|++|++| ++|+.+|+.|+.+..
T Consensus 285 ~~~~~~~~~~~~i~r~~G----------~~Ll~~Y~~y~~~l~ 317 (325)
T PRK10734 285 IFALLCWRRKRRIGRGAG----------ALLLGGFIVWLAMLY 317 (325)
T ss_pred HHHHHHHHcCCccChHHH----------HHHHHHHHHHHHHHH
Confidence 554443235678999999 789999999987654
No 6
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-48 Score=389.36 Aligned_cols=276 Identities=24% Similarity=0.350 Sum_probs=222.9
Q ss_pred CcccccceeeeccCChhHHHHHHHHHHhhccccCCCCccchhhhhhhhhhhHhHhhhheecccccccccccccchhhHHH
Q 042851 5 GITPSDIALLAFGTSFPQISLATIDAIRSIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVEL 84 (453)
Q Consensus 5 ~~~VaGlTivA~GTSaPEL~vSiia~~~~~~~~~~~digvGnIVGS~IfNillIlGl~al~~p~~~~~~~~~~~~~~~~~ 84 (453)
+|.++|+|++|+|||+||+.+|+.|+++ +++|+++||++|||++|+++++|+++++.|...+++..|++
T Consensus 43 ~~~~iG~tiva~gTslPE~~vs~~a~l~-----g~~~iavGnvlGSni~ni~li~gl~ali~~~~~~~~~~~r~------ 111 (320)
T COG0530 43 SELIIGLTIVAFGTSLPELAVSLVAALS-----GNPDIAVGNVLGSNIFNILLILGLAALIAPLKVDSDVLRRE------ 111 (320)
T ss_pred CHHHHHHHHHHHHccChHHHHHHHHHHc-----CCCCeeeehhhhHHHHHHHHHHHHHHHHhhhHhhhhHHHHh------
Confidence 5789999999999999999999999997 68999999999999999999999999999987665533333
Q ss_pred HHHHHHHHH-HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHhhccCccccccccccCCCCCCCccccCCCCCCCCcc
Q 042851 85 FWSFWAYVW-LYIILEVWTPNVITFWEALLTVLQYGLLLIHAYAQDKRWPYLSLPIARTERPEDWVPQETTSCKDENCDY 163 (453)
Q Consensus 85 ~~~~~~y~~-~~ill~~~~dg~i~~~Eg~ill~~~~~yl~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (453)
..+++. ..+++.+..|++++++||++++++|.+|++++++..|+ .+
T Consensus 112 ---~~f~ll~~~~~~~~~~~~~~~~~~gi~ll~l~~~yl~~~~~~~~~-----------~~------------------- 158 (320)
T COG0530 112 ---IPFLLLATLILLLVLLDGHLSRLDGIVLLLLYVLYLYYLLKLSRE-----------AE------------------- 158 (320)
T ss_pred ---hHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHhhhh-----------cc-------------------
Confidence 222222 33445667899999999999999999999999865421 10
Q ss_pred ccccccccccccCcccceeeeeccCCCCcccCCccccCCCCcchhhhhhhhhhhhcccCCccccchhhhhhhhhhcccCc
Q 042851 164 DECSEILQLGEDENRGVVDIFSIHSPNGAVTSPLYQKVPGSEDVAEISKESFREEINSELPHVHALWKQQFVDSIALESP 243 (453)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~a~~~~~~ 243 (453)
+ + +++++| .+. ..+.
T Consensus 159 -~-----------------------~----------------~~~~~e-----------~~~-~~~~------------- 173 (320)
T COG0530 159 -E-----------------------P----------------GEQENE-----------RPK-KGSL------------- 173 (320)
T ss_pred -c-----------------------c----------------cccccc-----------ccc-cchH-------------
Confidence 0 0 000000 000 0000
Q ss_pred hhhhhhhhhHHHHHHHHHHhhhhhhhheeecCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhhh
Q 042851 244 ESRKMNNIYLRLARIFWQSLLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTAL 323 (453)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~vpp~~~~~~~~~f~~~i~~i~~~s~~lv~~a~~ia~~~gis~~viGlTiv 323 (453)
.+..++ ++.|+..+..++++++++++.+|+.+|+||.++|+|++
T Consensus 174 -----------~~~~~~-------------------------~~~~~~~l~~g~~llv~~~~~iA~~~gi~e~~igltiv 217 (320)
T COG0530 174 -----------RKALLV-------------------------LVIGLILLVVGSELLVDGAVEIAEIFGISELIIGLTIV 217 (320)
T ss_pred -----------HHHHHH-------------------------HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 022322 55678888899999999999999999999999999999
Q ss_pred hcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhhhHHHHHHhhhccccccccEEEecCCCchhHHHHHHHHHH
Q 042851 324 ASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYNFIVYKEPLRVQNAEGLSFSLLVFFCTSV 403 (453)
Q Consensus 324 A~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvLGl~~li~~~~~~~~~~~pi~v~~~~~l~~~~~~l~~~~~ 403 (453)
|+|||+||+++|+.++ |||+.|+|+||++|||+||+++++|++.++ .|+...+. .+.+|.++|+..++
T Consensus 218 aigTSlPElv~si~a~-rkg~~~iavGnviGSni~n~~~~lGi~~~~----------~~~~~~~~-~~~~~~~vmi~~~l 285 (320)
T COG0530 218 AIGTSLPELVVSIVAA-RKGEDDIAVGNVIGSNIFNILIVLGISALI----------GPITVEPS-ALLVDAPVLILVTL 285 (320)
T ss_pred HHHcccHHHHHHHHHH-HcCCCCeEEeeecchHHHHHHHHHhHHHhc----------cccccCch-hHHHHHHHHHHHHH
Confidence 9999999999999999 899999999999999999999999999999 56666665 78899999998888
Q ss_pred HHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 042851 404 GCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVVLSSL 447 (453)
Q Consensus 404 l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~~~l 447 (453)
++..+...+++|++|.+| ..++..|+.|..+..+
T Consensus 286 ~l~l~~~~~~~~i~r~~g----------~~ll~~Y~~~~~~~~~ 319 (320)
T COG0530 286 LLLLFLARRRRRIGRKEG----------LLLLGLYIVYVALLIL 319 (320)
T ss_pred HHHHHHHhccCcchhHHH----------HHHHHHHHHHHHHHhh
Confidence 777663368899999999 7899999998877653
No 7
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=100.00 E-value=3.8e-44 Score=360.81 Aligned_cols=273 Identities=22% Similarity=0.314 Sum_probs=212.0
Q ss_pred cCcccccceeeeccCChhHHHHHHHHHHhhccccCCCCccchhhhhhhhhhhHhHhhhheecccccccccccccchhhHH
Q 042851 4 CGITPSDIALLAFGTSFPQISLATIDAIRSIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVE 83 (453)
Q Consensus 4 ~~~~VaGlTivA~GTSaPEL~vSiia~~~~~~~~~~~digvGnIVGS~IfNillIlGl~al~~p~~~~~~~~~~~~~~~~ 83 (453)
+||.++|+|++|+|||+||+++|+.++.+ +++|+++||++|||+||+++++|+|+++.|...+++.
T Consensus 34 l~~~v~G~tlla~gtslPEl~~si~a~~~-----g~~~la~g~ilGS~l~n~l~i~g~~~l~~~~~~~~~~--------- 99 (307)
T TIGR00367 34 ISPLIIGVTVVAIGTSLPELFTSLIASLI-----GQPDIGVGNVIGSNIFNILLILGLSAIFSPIIVDTDW--------- 99 (307)
T ss_pred CCHHHHHHHHHHHHcccHHHHHHHHHHhc-----CCCCeehhhhhhHHHHHHHHHHHHHHhhcceeechHH---------
Confidence 57999999999999999999999999986 7999999999999999999999999999875433221
Q ss_pred HHHHHHHHHH-HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHhhccCccccccccccCCCCCCCccccCCCCCCCCc
Q 042851 84 LFWSFWAYVW-LYIILEVWTPNVITFWEALLTVLQYGLLLIHAYAQDKRWPYLSLPIARTERPEDWVPQETTSCKDENCD 162 (453)
Q Consensus 84 ~~~~~~~y~~-~~ill~~~~dg~i~~~Eg~ill~~~~~yl~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (453)
..++..+++. ...+..+..||+++|+||+++++.|++|+.+.+++.|+ +++ +
T Consensus 100 ~~~d~~~~l~~~~~~~~~~~~g~i~~~~gi~ll~~Yv~yl~~~~~~~~~----------~~~---------------~-- 152 (307)
T TIGR00367 100 LRRDFSFYLLVSILLLFFGLDGPISRLDGVVLLFLYVVYLLFLVKVERQ----------MIN---------------D-- 152 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHh----------ccc---------------c--
Confidence 1344444433 22334445789999999999999999999998865421 000 0
Q ss_pred cccccccccccccCcccceeeeeccCCCCcccCCccccCCCCcchhhhhhhhhhhhcccCCccccchhhhhhhhhhcccC
Q 042851 163 YDECSEILQLGEDENRGVVDIFSIHSPNGAVTSPLYQKVPGSEDVAEISKESFREEINSELPHVHALWKQQFVDSIALES 242 (453)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~a~~~~~ 242 (453)
+ . ++ ++.++ ++...+.|
T Consensus 153 -----~--------------------~---------~~-------~~~~~----------~~~~~~~~------------ 169 (307)
T TIGR00367 153 -----T--------------------Y---------TE-------EQLDE----------NNRRKQIF------------ 169 (307)
T ss_pred -----c--------------------c---------ch-------hhhhc----------ccccccHH------------
Confidence 0 0 00 00000 00000000
Q ss_pred chhhhhhhhhHHHHHHHHHHhhhhhhhheeecCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhh
Q 042851 243 PESRKMNNIYLRLARIFWQSLLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTA 322 (453)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~vpp~~~~~~~~~f~~~i~~i~~~s~~lv~~a~~ia~~~gis~~viGlTi 322 (453)
+.. ..++++++++..+++.+++.++.+++.+|+||.++|+|+
T Consensus 170 -------------~~~-------------------------~~~~~~~~~i~~~s~~~v~~~~~i~~~lgi~~~~~g~tl 211 (307)
T TIGR00367 170 -------------FLI-------------------------VLLIIGLTGLVVGSRLLVDGAVQIAEIFGISEKIIGLTL 211 (307)
T ss_pred -------------HHH-------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 111 225678999999999999999999999999999999999
Q ss_pred hhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhhhHHHHHHhhhccccccccEEEecCCCchhHHHHHHHHH
Q 042851 323 LASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYNFIVYKEPLRVQNAEGLSFSLLVFFCTS 402 (453)
Q Consensus 323 vA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvLGl~~li~~~~~~~~~~~pi~v~~~~~l~~~~~~l~~~~ 402 (453)
+|+|||+||+++++.++ |||+.|+|+||++|||+||+++++|++|++ .|+++++. .+.+|.+++++++
T Consensus 212 ~a~~ts~PE~~~~i~a~-~~g~~~~avg~~iGs~i~~~~~~~g~~~~~----------~~~~~~~~-~~~~~~~~~~~~~ 279 (307)
T TIGR00367 212 LAIGTSLPELVVSVAAA-RKGLGDIAVGNVIGSNIFNILVGLGVPSLF----------YPIPVEPL-AYSLDAPVMVIVT 279 (307)
T ss_pred HHHHcccHHHHHHHHHH-HcCCCchHHHHHhhhHHHHHHHHHHHHHHh----------cccccchh-HHHHHHHHHHHHH
Confidence 99999999999999999 899999999999999999999999999999 45666554 6778888777766
Q ss_pred HHHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHH
Q 042851 403 VGCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIF 441 (453)
Q Consensus 403 ~l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~y 441 (453)
+++.... .++++++|++| ++|+.+|+.|
T Consensus 280 ~~~~~~~-~~~~~i~~~~g----------~~l~~~Y~~y 307 (307)
T TIGR00367 280 LVLMLVF-KTSMKLGRWEG----------FLLLALYIAY 307 (307)
T ss_pred HHHHHHH-HhcCeehHHHH----------HHHHHHHHhC
Confidence 5554443 56789999999 7899999876
No 8
>PLN03151 cation/calcium exchanger; Provisional
Probab=100.00 E-value=8.5e-40 Score=354.80 Aligned_cols=416 Identities=17% Similarity=0.200 Sum_probs=238.1
Q ss_pred CcccccceeeeccCChhHHHHHHHHHHhhccccCCCCccchhhhhhhhhhhHhHhhhheecccccccccccccchhhHHH
Q 042851 5 GITPSDIALLAFGTSFPQISLATIDAIRSIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVEL 84 (453)
Q Consensus 5 ~~~VaGlTivA~GTSaPEL~vSiia~~~~~~~~~~~digvGnIVGS~IfNillIlGl~al~~p~~~~~~~~~~~~~~~~~ 84 (453)
||.|||+|++|+|||+||+++|+.|..++ +++|+|+||++|||+||+++|.|+++++.|.. ..+.+.++.
T Consensus 176 se~vAGvTlLAfGNsaPDlf~si~a~~~~----~~~~l~ig~ilGs~lf~~~vV~G~v~l~~~~~----pf~v~~~~f-- 245 (650)
T PLN03151 176 PPTVAGVTLLPLGNGAPDVFASIAAFVGK----DAGEVGLNSVLGGAVFVTCVVVGIVSLCVADK----EVQIDKRCF-- 245 (650)
T ss_pred CHHHHHHHHHHHhCCcHHHHHHHHHHHcC----CCCceeeehhhhHHHHHHHHHHHHHHHhccCC----ceeecchhH--
Confidence 79999999999999999999999887742 57899999999999999999999999986421 112222222
Q ss_pred HHHHHHHHHHH-HHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHhhccCccccccccccCCCCCCCccccCCCCCCCCcc
Q 042851 85 FWSFWAYVWLY-IILEVWTPNVITFWEALLTVLQYGLLLIHAYAQDKRWPYLSLPIARTERPEDWVPQETTSCKDENCDY 163 (453)
Q Consensus 85 ~~~~~~y~~~~-ill~~~~dg~i~~~Eg~ill~~~~~yl~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (453)
.||+.+|++.+ ++..+..||.+++|||++++++|++|++...... ..++. .|+.+..+..+.......++..+.
T Consensus 246 ~RD~~F~lla~~~l~~~l~~g~v~~~eai~ll~lY~~Yv~vv~~~~-~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 320 (650)
T PLN03151 246 IRDLCFFLFTLVSLLVILMVGKVTVGGAIAFVSIYVVYAFLVAANE-ILRKH----ARRLKLDVVTPLLPVQGSIFSPSV 320 (650)
T ss_pred HHhHHHHHHHHHHHHHHHHcCeEhHHHHHHHHHHHHHHHHHHHhhH-HHHHH----HHhhhhhhcccccccccccccccc
Confidence 57777776633 3345567999999999999999999998775322 11000 011100000000000000000000
Q ss_pred ccccccc-cccccCcccceeeeeccCCCC-cccCCc-cccCCCCcchhhhhhhhh-hhhcccCCccccchhhhh------
Q 042851 164 DECSEIL-QLGEDENRGVVDIFSIHSPNG-AVTSPL-YQKVPGSEDVAEISKESF-REEINSELPHVHALWKQQ------ 233 (453)
Q Consensus 164 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~w~~~------ 233 (453)
++.+... ...+.+.++..+..+.+.+.. ..+... +.+.....+..+++++.. .++.+.++.+ ...|-.+
T Consensus 321 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~e~~~-~~~~~~ki~~ll~ 399 (650)
T PLN03151 321 EEDESMYSPLLESDTESDVPRLQTSLPQWMWASNVAIYSNHFAKGSVHDEERPPWGWTDEGAEVES-SLFSCSKLFSLLE 399 (650)
T ss_pred hhhhhhhhhhhcccccccchhhccccccccccccccccccchhhhhhhhccccccccCchhhhhhc-chhHHHHHHHHHH
Confidence 0000000 000000000000000000000 000000 000000000000000000 0000000000 0001111
Q ss_pred ----hhhhhcccCch--hhhhhhhhHHHHHH------------------------HHH---Hhhhhhhhh-eeecCCccc
Q 042851 234 ----FVDSIALESPE--SRKMNNIYLRLARI------------------------FWQ---SLLVPWRVL-FAFVPPYHI 279 (453)
Q Consensus 234 ----~~~a~~~~~~~--~~~~~~~~~~~~~~------------------------~~~---~l~~p~~~~-~~~vpp~~~ 279 (453)
+.-.++.+..+ .++ +...+.++ +|. .++.|+-++ |.+..+.+.
T Consensus 400 ~Pl~lll~LTIP~vd~~~Ws---K~l~~~q~~l~P~l~~~~~~~~~~~~~~~~~~vw~~~~~ig~~Lai~vf~~tr~d~P 476 (650)
T PLN03151 400 MPLTIPRRLTIPIVEEDRWS---KTYAVASASLAPVLLAFLWSSQDDVSLQARIAAYFIGVAIGSTLGFLAYKYTEPDRP 476 (650)
T ss_pred hHHHHHHHhcCCCCCcccCC---HHHHHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 11112222211 111 10000111 111 123343332 333333322
Q ss_pred cc----hh--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCCC--ceeeh
Q 042851 280 AH----GW--IAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITAD--SAIAN 351 (453)
Q Consensus 280 ~~----~~--~~f~~~i~~i~~~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~d--iAigN 351 (453)
++ .| +.|++|++||...++.+++..+.+|..+|+|+.++|+|++|+|+|+||+++++..| |+|++. ||+++
T Consensus 477 P~~~~~~~~~~~f~~Si~wi~~~a~elv~~l~~iG~i~~is~~~lglTvlA~gnsi~Dlian~~lA-~~G~~~m~mA~~a 555 (650)
T PLN03151 477 PRRFLIPWVLGGFIMSIVWFYMIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALA-MNGGDGVQIAMSG 555 (650)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccHHHHHHHHHHH-HcCCchhHHHHHH
Confidence 22 23 68999999999999999999999999999999999999999999999999999999 899875 67889
Q ss_pred hccchhhHHHhhhhHHHHHHhhhccccccccEEEecCCCchhHHHHHHHHHHHHHHHHHHhCCcccccccccchhhHHHH
Q 042851 352 ITCSNSVNIYVGIGIPWLIDTAYNFIVYKEPLRVQNAEGLSFSLLVFFCTSVGCIAVLVLRRLTLGAELGGPKLWAWVTS 431 (453)
Q Consensus 352 iiGSNifNillvLGl~~li~~~~~~~~~~~pi~v~~~~~l~~~~~~l~~~~~l~~~~~~~~~~~i~r~~G~~~~~~~~~~ 431 (453)
++|+|+||+++++|+|+++++... ++.+..+..+..+.+....++...+..+.++..+|++++|..|
T Consensus 556 ~~ggp~F~il~glG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~L~~~L~~~li~~~~~~f~~~R~~G---------- 622 (650)
T PLN03151 556 CYAGPMFNTLVGLGMSMLLGAWSK---SPESYMLPEDSSLFYTMGFLVSGLIWALVVLPRNDMRPNKTLG---------- 622 (650)
T ss_pred hhhhhHHHHHHhccHHHHHHHhhc---CCCceeecCCChHHHHHHHHHHHHHHHHHHHHHhCeeechhHH----------
Confidence 999999999999999999986532 2234544433245555544544444444444468899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCC
Q 042851 432 VYFMLLWIIFVVLSSLKVSGII 453 (453)
Q Consensus 432 ~~ll~~Y~~yl~~~~l~~~~~~ 453 (453)
+.++.+|++|+++..+.|.|++
T Consensus 623 ~~li~~Y~~Fl~~~~~~~~~~~ 644 (650)
T PLN03151 623 VGLIALYLIFLTFRVSTAMGFI 644 (650)
T ss_pred HHHHHHHHHHHHHHHHHHhCcc
Confidence 7999999999999999999864
No 9
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=100.00 E-value=1.1e-39 Score=335.44 Aligned_cols=284 Identities=15% Similarity=0.121 Sum_probs=194.3
Q ss_pred ccceeeeccCChhHHHHHHHHHHhhccccCCCCccchhhhhhhhhhhHhHhhhheecccccccc-cccccchhhHHHHHH
Q 042851 9 SDIALLAFGTSFPQISLATIDAIRSIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELK-KISDIGVWLVELFWS 87 (453)
Q Consensus 9 aGlTivA~GTSaPEL~vSiia~~~~~~~~~~~digvGnIVGS~IfNillIlGl~al~~p~~~~~-~~~~~~~~~~~~~~~ 87 (453)
+|.+++|+|||+||+++|+.|+.+ +++|++.||++|||++|+++|+|+|+++.|...++ +..+++.... ...
T Consensus 69 vG~ll~a~~ts~pEL~vsi~A~~~-----g~~~la~gnivGS~i~NilLIlGl~~l~~~~~~~~~~~~~~~~~~~--~~~ 141 (365)
T TIGR00846 69 LGGLLNATFGNAVELIISLMALGE-----GKVEVVRASLLGSILSNLLLVLGLSLFLGGIKNIREQRFNRGAAQV--NSA 141 (365)
T ss_pred hhhHHHHHHhHHHHHHHHHHHccC-----CcHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeccHHHHHH--HHH
Confidence 566677999999999999999987 79999999999999999999999999999876432 2222211100 001
Q ss_pred HHHHHHHHH-HH----HHHcCC-----cchHHHHHHHHHHHHHHHHHHHHhhccCccccccccccCCCCCCCccccCCCC
Q 042851 88 FWAYVWLYI-IL----EVWTPN-----VITFWEALLTVLQYGLLLIHAYAQDKRWPYLSLPIARTERPEDWVPQETTSCK 157 (453)
Q Consensus 88 ~~~y~~~~i-ll----~~~~dg-----~i~~~Eg~ill~~~~~yl~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (453)
++. +.... ++ ....++ .++|++|++++++|++|+.+.++..|+. . ++
T Consensus 142 ll~-~~~~~l~lp~~~~~~~~~~~~~~~ls~~~giill~ly~~yl~~~~~~~~~~--------f-~~------------- 198 (365)
T TIGR00846 142 LLL-LAILSLVLPLALPAGKPGQDSILGLSRGIAIVMLILYGAFLVFQLVTHRQL--------F-EP------------- 198 (365)
T ss_pred HHH-HHHHHHHhhhHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccchhc--------c-cc-------------
Confidence 111 00111 11 112354 6999999999999999999887542210 0 00
Q ss_pred CCCCccccccccccccccCcccceeeeeccCCCCcccCCccccCCCCcchhhhhhhhhhhhcccCCccccchhhhhhhhh
Q 042851 158 DENCDYDECSEILQLGEDENRGVVDIFSIHSPNGAVTSPLYQKVPGSEDVAEISKESFREEINSELPHVHALWKQQFVDS 237 (453)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~a 237 (453)
++. + + ++ ++ ++++ ++++..+.|
T Consensus 199 ------~~~-~--------------------~---------~~----~~-~~~~----------~~~~~~~~~------- 220 (365)
T TIGR00846 199 ------QEE-A--------------------D---------SD----YD-DEVH----------EEPTVISPW------- 220 (365)
T ss_pred ------ccc-c--------------------c---------cc----cc-cccc----------cccccccHH-------
Confidence 000 0 0 00 00 0000 000000001
Q ss_pred hcccCchhhhhhhhhHHHHHHHHHHhhhhhhhheeecCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhh
Q 042851 238 IALESPESRKMNNIYLRLARIFWQSLLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGINAYV 317 (453)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~vpp~~~~~~~~~f~~~i~~i~~~s~~lv~~a~~ia~~~gis~~v 317 (453)
+..++ ++.+.+.+..+++++|++++.+++.+|+||.+
T Consensus 221 ------------------~~i~~-------------------------l~~~~~~l~~~a~~lv~~~~~ia~~~gis~~~ 257 (365)
T TIGR00846 221 ------------------SAAAW-------------------------LVGATIVVALLAEYLVDTIESAVESWGLSVAF 257 (365)
T ss_pred ------------------HHHHH-------------------------HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 22222 34577788889999999999999999999999
Q ss_pred hhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhhhHHHHHHhhhccccccccEEEecCCCchhHHHH
Q 042851 318 IAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYNFIVYKEPLRVQNAEGLSFSLLV 397 (453)
Q Consensus 318 iGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvLGl~~li~~~~~~~~~~~pi~v~~~~~l~~~~~~ 397 (453)
+|+|++|+|||+||+++|+.+| +||+.|+++||++|||+||+++++|++.++.... +.|++... -.++..+
T Consensus 258 iGl~lvai~tslpE~~~si~aa-~~g~~~lavg~~iGSni~n~l~vl~~~~li~~~~-----~~~~~l~~---~~~~~~~ 328 (365)
T TIGR00846 258 IGVILAPIVGNAAEHAGAVIAA-FKNKLDIALGVALGSALQIALFVVPVVVLVAWML-----GIPMDLNF---GAPETVA 328 (365)
T ss_pred HHHHHHHHhcccHHHHHHHHHH-HcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCceeccC---cHHHHHH
Confidence 9999999999999999999999 8999999999999999999999999999995321 23333322 2234444
Q ss_pred HHHHHHHHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHHHH
Q 042851 398 FFCTSVGCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVVL 444 (453)
Q Consensus 398 l~~~~~l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~ 444 (453)
+++ ++++.... .+++|++|.+| ++++.+|++|...
T Consensus 329 l~~-s~~~~~~~-~~~~~~~~~eG----------~~ll~~Y~~~~~~ 363 (365)
T TIGR00846 329 LAL-SVFLTTIT-LQDGRSNYLEG----------AVLLALYIIIAML 363 (365)
T ss_pred HHH-HHHHHHHH-HcCCcCcHHHH----------HHHHHHHHHHHHH
Confidence 433 33333333 46889999999 7999999999764
No 10
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=100.00 E-value=3.9e-38 Score=322.29 Aligned_cols=289 Identities=13% Similarity=0.113 Sum_probs=202.6
Q ss_pred ccCcccccceeeeccCChhHHHHHHHHHHhhccccCCCCccchhhhhhhhhhhHhHhhhheecccccccccccccchhhH
Q 042851 3 RCGITPSDIALLAFGTSFPQISLATIDAIRSIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLV 82 (453)
Q Consensus 3 ~~~~~VaGlTivA~GTSaPEL~vSiia~~~~~~~~~~~digvGnIVGS~IfNillIlGl~al~~p~~~~~~~~~~~~~~~ 82 (453)
..+|.|.|+|.+++|| +||+++|+.|+.+ +++|++.||++|||++|+++|+|+|+++.|...+++..+++.-..
T Consensus 46 ~~g~~vggl~~~~~gt-~pEL~vsi~A~~~-----g~~~i~~gnivGS~i~NllLilGls~liggl~~~~q~~~~~~a~~ 119 (349)
T TIGR00378 46 KAGPTIGGLLNATFGN-AVELIVSIIALKE-----GLVRIVQASLTGSLLGNLLLVLGLCFFFGGLNYKQQTFNQTAART 119 (349)
T ss_pred HcCchHHHHHHHhhcc-HHHHHHHHHHHHc-----CChhhhHHHHHHHHHHhHHHHHHHHHHHhccccceeecCHHHHHH
Confidence 4568999999999999 9999999999997 799999999999999999999999999998765544433321000
Q ss_pred HHHHHHHHHHHHHHHHHH-----Hc----CC---cchHHHHHHHHHHHHHHHHHHHHhhccCccccccccccCCCCCCCc
Q 042851 83 ELFWSFWAYVWLYIILEV-----WT----PN---VITFWEALLTVLQYGLLLIHAYAQDKRWPYLSLPIARTERPEDWVP 150 (453)
Q Consensus 83 ~~~~~~~~y~~~~ill~~-----~~----dg---~i~~~Eg~ill~~~~~yl~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 150 (453)
...++. +....++.. .. |+ .++|++|++++++|.+|+.+.++..|+. .+++
T Consensus 120 --~~~ll~-la~~~l~lp~~~~~~~~~~~~~~~~~ls~~~aiill~lY~~~L~~~l~~h~~~---------f~~~----- 182 (349)
T TIGR00378 120 --NSSLLA-IACVALLIPAARATLSHGKEDGKILNLSRGTSIVIIIVYVLFLYFQLGTHHAL---------YEQQ----- 182 (349)
T ss_pred --HHHHHH-HHHHHHHhhhHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH---------hCCc-----
Confidence 011111 111111111 01 33 6899999999999999999887543210 0000
Q ss_pred cccCCCCCCCCccccccccccccccCcccceeeeeccCCCCcccCCccccCCCCcchhhhhhhhhhhhcccCCccccchh
Q 042851 151 QETTSCKDENCDYDECSEILQLGEDENRGVVDIFSIHSPNGAVTSPLYQKVPGSEDVAEISKESFREEINSELPHVHALW 230 (453)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 230 (453)
+. + ++ + ++++.+ +++. ..|
T Consensus 183 ---------~~------~-------------------~~----------~-----~~~~~~----------~~~~--~~~ 201 (349)
T TIGR00378 183 ---------EA------E-------------------TD----------E-----VMETIE----------RNPH--HSL 201 (349)
T ss_pred ---------cc------c-------------------cc----------c-----cccccc----------cccc--ccc
Confidence 00 0 00 0 000000 0000 000
Q ss_pred hhhhhhhhcccCchhhhhhhhhHHHHHHHHHHhhhhhhhheeecCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 042851 231 KQQFVDSIALESPESRKMNNIYLRLARIFWQSLLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCV 310 (453)
Q Consensus 231 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~vpp~~~~~~~~~f~~~i~~i~~~s~~lv~~a~~ia~~ 310 (453)
+.++...+ ++.+.+.+..+|++++++++.+++.
T Consensus 202 ----------------------~~~~~~~~-------------------------L~~~~v~i~~~a~~lv~~~~~~~~~ 234 (349)
T TIGR00378 202 ----------------------SVKSSTVV-------------------------LLGTTVIVAFCSEFLVGTIDNVVES 234 (349)
T ss_pred ----------------------cHHHHHHH-------------------------HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00012222 3457778888999999999999999
Q ss_pred hCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhhhHHHHHHhhhccccccccEEEecCCC
Q 042851 311 TGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYNFIVYKEPLRVQNAEG 390 (453)
Q Consensus 311 ~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvLGl~~li~~~~~~~~~~~pi~v~~~~~ 390 (453)
+|+|+.++|+|++|+|||+||+++|+.+| +||+.|+++||++|||++|+++++++..++.... +.|+...-
T Consensus 235 ~gi~~~~igl~iva~~tslpE~~~ai~aa-~~~~~~~ai~~~~GS~i~~~l~v~p~lvl~~~~~-----~~~~~L~f--- 305 (349)
T TIGR00378 235 TGLSKLFIGVIVIPIVGNAAEHATAVLVA-MKDKMDLALGVAIGSSLQIALFVAPVLVIVGWMI-----DVPMTLNF--- 305 (349)
T ss_pred cCCCHHHHHHHHHHHhcccHHHHHHHHHH-HcCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHh-----CCCceecC---
Confidence 99999999999999999999999999999 7899999999999999999999999877764322 35665543
Q ss_pred chhHHHHHHHHHHHHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHHH
Q 042851 391 LSFSLLVFFCTSVGCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVV 443 (453)
Q Consensus 391 l~~~~~~l~~~~~l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~ 443 (453)
-.++.+.++++.+++. .. .+++|.+|.+| ..++.+|+++-+
T Consensus 306 ~~~~~~~l~~~v~~~~-~~-~~dg~~n~leG----------~~ll~~Y~i~~~ 346 (349)
T TIGR00378 306 STFELVALFIAVLLSN-YI-SLDGESNWLEG----------VMLLAMYIIIAM 346 (349)
T ss_pred cHHHHHHHHHHHHHHH-HH-HhCCCCcHHHH----------HHHHHHHHHHHH
Confidence 2466666665544333 32 57889999999 789999998754
No 11
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=2.5e-25 Score=238.89 Aligned_cols=408 Identities=18% Similarity=0.215 Sum_probs=231.5
Q ss_pred cCcccccceeeeccCChhHHHHHHHHHHhhccccCCCCccchhhhhhhhhhhHhHhhhheecccccccccccccchhhHH
Q 042851 4 CGITPSDIALLAFGTSFPQISLATIDAIRSIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVE 83 (453)
Q Consensus 4 ~~~~VaGlTivA~GTSaPEL~vSiia~~~~~~~~~~~digvGnIVGS~IfNillIlGl~al~~p~~~~~~~~~~~~~~~~ 83 (453)
=||.|||.|++|+|.++|.++.|+.|.... ..+|+|+|+++|+++|=..++.|+-.+..|-+..+. .
T Consensus 139 l~esvAGVTlLa~GNgapDvf~siasv~~~----~~~~~~~~~~lg~alFVt~~V~G~i~~t~pFki~~~---------~ 205 (605)
T KOG2399|consen 139 LSESVAGVTLLAFGNGAPDVFASIASVRGT----PKGDLALNDLLGGALFVTTVVVGLIILTKPFKINAN---------S 205 (605)
T ss_pred CCCceeeEEEeeecCCCchHHhhhheeecC----CCcccHHHHHhccceeEEeeEeeeeeeecceeeccc---------h
Confidence 389999999999999999999999988863 555999999999999999999999999998432221 2
Q ss_pred HHHHHHHHHHHHHHH--HHHcCCcchHHHHHHHHHHHHHHHHHHHH-hhccCccccccccccCCCCCCCcc---ccCC--
Q 042851 84 LFWSFWAYVWLYIIL--EVWTPNVITFWEALLTVLQYGLLLIHAYA-QDKRWPYLSLPIARTERPEDWVPQ---ETTS-- 155 (453)
Q Consensus 84 ~~~~~~~y~~~~ill--~~~~dg~i~~~Eg~ill~~~~~yl~~~~~-~~k~~~~~~~~~~~~~~~~~~~~~---~~~~-- 155 (453)
..||..+|+....++ ....++++++|.++.++..|..|+..... ..++.... .|++..+ .+|. +.+.
T Consensus 206 ~iRDi~Fll~al~~l~~~~~~~~~v~~~~~l~fl~~y~~Yv~~vi~~~~~~i~~~----~r~~~~~-~~~~~~~~~~~~~ 280 (605)
T KOG2399|consen 206 FIRDILFLLLALLFLAFILLRGNKVEIWMALTFLGIYVVYVVTVIVLLSARIRKD----RRKRFLE-LTPLRDMEESLFE 280 (605)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCceeHHhHHHHhHHHHHHHHHHHHHHHHHHHHH----hhcchhc-cCCCcccchhhhc
Confidence 257877777644333 33345599999999999999999986552 00110000 0110000 0000 0000
Q ss_pred CCCCCCccccccccccccccCcccceeeeeccCCCCcccCCccccCCCCcchhhhhhhhhhhhcccCCccc-cchhhh--
Q 042851 156 CKDENCDYDECSEILQLGEDENRGVVDIFSIHSPNGAVTSPLYQKVPGSEDVAEISKESFREEINSELPHV-HALWKQ-- 232 (453)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~w~~-- 232 (453)
+.....+.+|.++. .+.+.+ .+.+..++.....++.. ...+.. ....++..+|....-++-+ ...|+|
T Consensus 281 ~~~~~~s~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 351 (605)
T KOG2399|consen 281 ALSVEPSIEEDEEE-LLRETH----THRFSGHDQMSNRAWTR-IEIIYA---NNRNQDLFSDFFRHLRPWDSDEEFYEMN 351 (605)
T ss_pred ccccCCccccccch-hhhhcC----CCcccchhhhhhhhHHH-Hhhccc---ccchHHHHHHHHhccCCCCchhhhhhhh
Confidence 00000000000000 000000 00000000000000000 000000 0000000000000000000 011211
Q ss_pred ---hhh----------hhhcccCch---hhhhhhh------hHHHH-----------------HHHH-HHhhhhhhhh-e
Q 042851 233 ---QFV----------DSIALESPE---SRKMNNI------YLRLA-----------------RIFW-QSLLVPWRVL-F 271 (453)
Q Consensus 233 ---~~~----------~a~~~~~~~---~~~~~~~------~~~~~-----------------~~~~-~~l~~p~~~~-~ 271 (453)
.+. -.++.+..+ .+++--. .|... -++| ..++.+.-.+ +
T Consensus 352 ~~~kv~~~i~~p~~l~~~LtIP~v~~~~~Wsk~l~~~~~~~~P~~l~~~i~~~~~~~~~~~~~~~~~~l~is~~la~l~~ 431 (605)
T KOG2399|consen 352 ILTKVLLIIKIPLVLLLRLTIPVVDSELSWSKPLNLLQVVLAPLLLLFLIQSLLYSISQGSPGLYLISLIISIPLAILAF 431 (605)
T ss_pred HHHHHHHHHhhhHhhhheeeecccCccccHHHHHHHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHH
Confidence 111 111221111 1110000 01000 0000 1122333222 3
Q ss_pred eecCCccccc----h--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCC
Q 042851 272 AFVPPYHIAH----G--WIAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITA 345 (453)
Q Consensus 272 ~~vpp~~~~~----~--~~~f~~~i~~i~~~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~ 345 (453)
.+.+..+.++ - .+.|.++++||...|..++..-+.+|..+|+|++++|+|+.|+|.|+-||++.+..| |+|.+
T Consensus 432 ~~t~~~~ppk~~~~v~~~~gF~mSi~wI~~~A~Eiv~vl~~lG~I~~ls~siLGLTv~AWgNSiGDLIAniava-k~G~p 510 (605)
T KOG2399|consen 432 FFTRLDKPPKFYHWVFSALGFLMSIAWIYLIANELVAVLTMLGVIFGLSPSILGLTVLAWGNSIGDLIANIAVA-KQGYP 510 (605)
T ss_pred HhCcccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhccHHHHHHHHHHH-HcCcH
Confidence 3344333332 2 278999999999999999999999999999999999999999999999999999999 89999
Q ss_pred CceeehhccchhhHHHhhhhHHHHHHhhhccccccccEEEecCCCchhHHHHHHHHHHHHHHHHHHhCCcccccccccch
Q 042851 346 DSAIANITCSNSVNIYVGIGIPWLIDTAYNFIVYKEPLRVQNAEGLSFSLLVFFCTSVGCIAVLVLRRLTLGAELGGPKL 425 (453)
Q Consensus 346 diAigNiiGSNifNillvLGl~~li~~~~~~~~~~~pi~v~~~~~l~~~~~~l~~~~~l~~~~~~~~~~~i~r~~G~~~~ 425 (453)
.||+|.++|+.+||++.++|++..+++...+ +....+..++.+.....++.+..+..++.+...|+|+.|..|
T Consensus 511 ~MAmaac~GGplfn~lvg~G~~~~i~~~~~~---~~~~~~~~~~~l~~~~~fL~i~l~~slv~~~~~~f~~~r~~g---- 583 (605)
T KOG2399|consen 511 RMAMAACIGGPLFNLLVGLGLPLVISSLQGK---PGNIVIPEDNSLRITLIFLLIGLLTSLVLIPTNRFRLRRVLG---- 583 (605)
T ss_pred HHHHHHHhhhHHHHHHHHhhHHHHHHHHhcC---CCceecccCCceehhHHHHHHHHHHHHHHHhcccceeccchh----
Confidence 9999999999999999999999999876532 122222222244444444444444444344457899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhCC
Q 042851 426 WAWVTSVYFMLLWIIFVVLSSLKVSGI 452 (453)
Q Consensus 426 ~~~~~~~~ll~~Y~~yl~~~~l~~~~~ 452 (453)
+.++.+|+.|.....+.+..+
T Consensus 584 ------i~L~~lyi~f~~~~~ll~~~~ 604 (605)
T KOG2399|consen 584 ------IGLLSLYIAFTLIFILLELGG 604 (605)
T ss_pred ------hHHHHHHHHHHHHHHHHHHhc
Confidence 799999999977776666543
No 12
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=99.91 E-value=7.4e-24 Score=215.04 Aligned_cols=138 Identities=25% Similarity=0.326 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhhh
Q 042851 286 FICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIG 365 (453)
Q Consensus 286 f~~~i~~i~~~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvLG 365 (453)
+++++..+..++++++++++.+|+.+|+|+.++|+|++|+|||+||+++|+.|+ ++|++|+++||++|||+||+++++|
T Consensus 8 ~~~gl~~l~~ga~~lv~~~~~ia~~lgis~~viG~tiva~gTSlPEl~vsv~A~-~~g~~~ia~GnilGSni~ni~lilg 86 (325)
T PRK10734 8 LIIGLLLLVYGADRLVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAAS-LHGQRDLAVGTALGSNITNILLILG 86 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcchhHHHHHHHHH-HcCCCcchhhhhhhHHHHHHHHHHH
Confidence 557788888899999999999999999999999999999999999999999999 7999999999999999999999999
Q ss_pred HHHHHHhhhccccccccEEEecCCCchhHHHHHHHHHHHHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHHHHH
Q 042851 366 IPWLIDTAYNFIVYKEPLRVQNAEGLSFSLLVFFCTSVGCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVVLS 445 (453)
Q Consensus 366 l~~li~~~~~~~~~~~pi~v~~~~~l~~~~~~l~~~~~l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~~ 445 (453)
+++++ .|++++.+ ....+.++++.+++++..+ .++++++|.+| ++++.+|+.|+.+.
T Consensus 87 ~~~l~----------~~~~~~~~-~~~~~~~~ll~~~~~~~~~--~~~~~l~~~~g----------~~ll~~~~~yl~~~ 143 (325)
T PRK10734 87 LAALI----------RPFTVHSD-VLRRELPLMLLVSVLAGSV--LYDGQLSRSDG----------IFLLLLAVLWLLFI 143 (325)
T ss_pred HHHHh----------CCcccChH-HHHHHHHHHHHHHHHHHHH--HHCCcCcHHHH----------HHHHHHHHHHHHHH
Confidence 99998 56767654 6667777776655443322 46778999999 68888999998876
Q ss_pred HH
Q 042851 446 SL 447 (453)
Q Consensus 446 ~l 447 (453)
..
T Consensus 144 ~~ 145 (325)
T PRK10734 144 VK 145 (325)
T ss_pred HH
Confidence 53
No 13
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=99.87 E-value=5.9e-22 Score=200.46 Aligned_cols=142 Identities=27% Similarity=0.353 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhh
Q 042851 285 AFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGI 364 (453)
Q Consensus 285 ~f~~~i~~i~~~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvL 364 (453)
.|+.++..+..+|++++++++.+++.+|+||.++|+|++|+|||+||+.+|..|+ .+|++|+|+||++|||++|+++++
T Consensus 14 ~~i~~l~llv~~ad~lv~~a~~Is~~~gi~~~~iG~tiva~gTslPE~~vs~~a~-l~g~~~iavGnvlGSni~ni~li~ 92 (320)
T COG0530 14 LLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAA-LSGNPDIAVGNVLGSNIFNILLIL 92 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccChHHHHHHHHH-HcCCCCeeeehhhhHHHHHHHHHH
Confidence 3667888889999999999999999999999999999999999999999999999 699999999999999999999999
Q ss_pred hHHHHHHhhhccccccccEEEecCCCchhHHHHHHHHHHHHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHHHH
Q 042851 365 GIPWLIDTAYNFIVYKEPLRVQNAEGLSFSLLVFFCTSVGCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVVL 444 (453)
Q Consensus 365 Gl~~li~~~~~~~~~~~pi~v~~~~~l~~~~~~l~~~~~l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~ 444 (453)
|+.+++ .|.+.+++ .+.++.+++++.++.+..+ ..+.+++|.+| +.++.+|+.|+.+
T Consensus 93 gl~ali----------~~~~~~~~-~~~r~~~f~ll~~~~~~~~--~~~~~~~~~~g----------i~ll~l~~~yl~~ 149 (320)
T COG0530 93 GLAALI----------APLKVDSD-VLRREIPFLLLATLILLLV--LLDGHLSRLDG----------IVLLLLYVLYLYY 149 (320)
T ss_pred HHHHHH----------hhhHhhhh-HHHHhhHHHHHHHHHHHHH--HHcCCccHHHH----------HHHHHHHHHHHHH
Confidence 999999 45666654 6888999998887766644 46788999999 7899999999988
Q ss_pred HHHHHh
Q 042851 445 SSLKVS 450 (453)
Q Consensus 445 ~~l~~~ 450 (453)
....+.
T Consensus 150 ~~~~~~ 155 (320)
T COG0530 150 LLKLSR 155 (320)
T ss_pred HHHhhh
Confidence 876544
No 14
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=99.87 E-value=1.1e-21 Score=197.77 Aligned_cols=142 Identities=23% Similarity=0.282 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhh
Q 042851 285 AFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGI 364 (453)
Q Consensus 285 ~f~~~i~~i~~~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvL 364 (453)
.|.++.+.+..+++.++++++.+|+.+|+||.++|+|++|+|||+||+++++.|+ ++|++|+|+||++|||+||+++++
T Consensus 6 ~~~~~~~~~~~~a~~lv~~~~~ia~~lgl~~~v~G~tlla~gtslPEl~~si~a~-~~g~~~la~g~ilGS~l~n~l~i~ 84 (307)
T TIGR00367 6 YLILGLILLIYGADLFVKSSVRIARKLGISPLIIGVTVVAIGTSLPELFTSLIAS-LIGQPDIGVGNVIGSNIFNILLIL 84 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHH-hcCCCCeehhhhhhHHHHHHHHHH
Confidence 4667888888999999999999999999999999999999999999999999999 799999999999999999999999
Q ss_pred hHHHHHHhhhccccccccEEEecCCCchhHHHHHHHHHHHHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHHHH
Q 042851 365 GIPWLIDTAYNFIVYKEPLRVQNAEGLSFSLLVFFCTSVGCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVVL 444 (453)
Q Consensus 365 Gl~~li~~~~~~~~~~~pi~v~~~~~l~~~~~~l~~~~~l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~ 444 (453)
|++.++ +|+..+++ .+.+|..++++..+++..+ ..+++++|.+| ++++.+|++|+.+
T Consensus 85 g~~~l~----------~~~~~~~~-~~~~d~~~~l~~~~~~~~~--~~~g~i~~~~g----------i~ll~~Yv~yl~~ 141 (307)
T TIGR00367 85 GLSAIF----------SPIIVDTD-WLRRDFSFYLLVSILLLFF--GLDGPISRLDG----------VVLLFLYVVYLLF 141 (307)
T ss_pred HHHHhh----------cceeechH-HHHHHHHHHHHHHHHHHHH--HHhCcchHHHH----------HHHHHHHHHHHHH
Confidence 999988 57777765 6788888777766555433 35678999999 7999999999998
Q ss_pred HHHHHh
Q 042851 445 SSLKVS 450 (453)
Q Consensus 445 ~~l~~~ 450 (453)
+...+.
T Consensus 142 ~~~~~~ 147 (307)
T TIGR00367 142 LVKVER 147 (307)
T ss_pred HHHHHH
Confidence 876553
No 15
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=99.85 E-value=3.7e-21 Score=210.87 Aligned_cols=135 Identities=19% Similarity=0.114 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhhhHHHHHHh
Q 042851 293 ISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDT 372 (453)
Q Consensus 293 i~~~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvLGl~~li~~ 372 (453)
...++++++.+++.||..+|+|+.++|+|++|+|||+||+++|++|+ ++|+.|+++||++|||+||+++++|+++++..
T Consensus 472 aIv~dDyFVPSLe~IAekLgLSE~VAGaTLLAfGTSAPELfTSLiAv-~~g~sDIGVGNIVGSnIFNILLVLGl~aLis~ 550 (1096)
T TIGR00927 472 AIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGV-FISHSNVGIGTIVGSAVFNILFVIGTCALFSR 550 (1096)
T ss_pred HHHHHHHhHHHHHHHHHHhCCcHhhhheeeeeeecCcHHHHHHHHHH-HcCCCcceehhhHhHHHHHHHHHHhhheeecc
Confidence 33477999999999999999999999999999999999999999999 68999999999999999999999999888731
Q ss_pred hhccccccccEEEecCCCchhHHHHHHHHHHHHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 042851 373 AYNFIVYKEPLRVQNAEGLSFSLLVFFCTSVGCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVVLSSLKV 449 (453)
Q Consensus 373 ~~~~~~~~~pi~v~~~~~l~~~~~~l~~~~~l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~~~l~~ 449 (453)
..+.++.. .+.+|+.++++...+++.+ +.++++++++| ++|+++|++|++++.+.+
T Consensus 551 --------~~l~Ld~~-~L~RDllFyILAv~lLilf--~lDG~Itr~Eg----------IILLlLYiiYVvvm~~n~ 606 (1096)
T TIGR00927 551 --------EILNLTWW-PLFRDVSFYILDLMMLILF--FLDSLIAWWES----------LLLLLAYALYVFTMKWNK 606 (1096)
T ss_pred --------cccccccc-ceehhHHHHHHHHHHHHHH--HhCCeEcHHHH----------HHHHHHHHHHHHHHHHhH
Confidence 22444444 5677888887766655433 35788999999 799999999998877654
No 16
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=99.78 E-value=2.1e-19 Score=159.22 Aligned_cols=137 Identities=24% Similarity=0.321 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhhhHHHHHH
Q 042851 292 FISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLID 371 (453)
Q Consensus 292 ~i~~~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvLGl~~li~ 371 (453)
++..+|+.+++..+.+++.+|+|+.++|+|++|++||+||+++++.++ ++|++|+|+||++|||++|++++.|+++++.
T Consensus 2 ~i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~-~~g~~~la~~~~~Gs~~~~~~l~~gl~~l~~ 80 (140)
T PF01699_consen 2 LIIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAA-RKGNPDLAIGNIIGSNIFNITLIVGLILLFG 80 (140)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHH-CTT-CHHHHHHHHHHHHHHHHTHHHHHHHHS
T ss_pred EehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHh-hccccchhhhcccchHHHHHHHHHHHHHHhc
Confidence 466789999999999999999999999999999999999999999999 8999999999999999999999999999994
Q ss_pred hhhccccccccEEEecCCCchhHHHHHHHHHHHHHHHHH--HhCCcccccccccchhhHHHHHHHHHHHHHHHHHH
Q 042851 372 TAYNFIVYKEPLRVQNAEGLSFSLLVFFCTSVGCIAVLV--LRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVVLS 445 (453)
Q Consensus 372 ~~~~~~~~~~pi~v~~~~~l~~~~~~l~~~~~l~~~~~~--~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~~ 445 (453)
...+ .+...+.. ....+..+++.+.+++..+.. .++++++|.+| ++++.+|+.|++++
T Consensus 81 ~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~ll~~y~~y~~~~ 140 (140)
T PF01699_consen 81 PIKL-----GSQTIDWS-SFTRDFSFLLLAILLLILFFLAFIRDGRISRFEG----------LVLLILYILYLVFT 140 (140)
T ss_dssp -B--------------H-HHHHHHHHHHHHHHHHHHCCT---HCT-BSHHHH----------HHHHHHHHHHHHH-
T ss_pred cccc-----cccccccc-hHHHHHHHHHHHHHHHHHHHHHHHcCCeEhHHHH----------HHHHHHHHHHHhcC
Confidence 3221 11123332 445566655554443332221 14789999999 79999999998763
No 17
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=99.74 E-value=8.2e-18 Score=172.56 Aligned_cols=139 Identities=14% Similarity=0.197 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhh
Q 042851 284 IAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVG 363 (453)
Q Consensus 284 ~~f~~~i~~i~~~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillv 363 (453)
..|+.+.+.+.-.+++++++++.+|+++| +.+.|+|.+++|| +||+++|+.|+ ++|+.|++.||++|||++|++++
T Consensus 20 ~~F~~~~~aiipla~~l~~~~~~lA~~~g--~~vggl~~~~~gt-~pEL~vsi~A~-~~g~~~i~~gnivGS~i~NllLi 95 (349)
T TIGR00378 20 LTFLFNFLAIIPLAAIMGNATEELADKAG--PTIGGLLNATFGN-AVELIVSIIAL-KEGLVRIVQASLTGSLLGNLLLV 95 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC--chHHHHHHHhhcc-HHHHHHHHHHH-HcCChhhhHHHHHHHHHHhHHHH
Confidence 45778888888899999999999999999 8999999999999 99999999999 79999999999999999999999
Q ss_pred hhHHHHHHhhhccccccccEEEecCCCchhH-----HHHHHHHHHHHHHHHHH---h----CC---cccccccccchhhH
Q 042851 364 IGIPWLIDTAYNFIVYKEPLRVQNAEGLSFS-----LLVFFCTSVGCIAVLVL---R----RL---TLGAELGGPKLWAW 428 (453)
Q Consensus 364 LGl~~li~~~~~~~~~~~pi~v~~~~~l~~~-----~~~l~~~~~l~~~~~~~---~----~~---~i~r~~G~~~~~~~ 428 (453)
+|+++++. |++.+++ .+..+ .++|+++++.+++...+ . +. .++|.+|
T Consensus 96 lGls~lig----------gl~~~~q-~~~~~~a~~~~~ll~la~~~l~lp~~~~~~~~~~~~~~~~~ls~~~a------- 157 (349)
T TIGR00378 96 LGLCFFFG----------GLNYKQQ-TFNQTAARTNSSLLAIACVALLIPAARATLSHGKEDGKILNLSRGTS------- 157 (349)
T ss_pred HHHHHHHh----------cccccee-ecCHHHHHHHHHHHHHHHHHHHhhhHHHhcCCCccchHHHHHHHHHH-------
Confidence 99999984 4433332 33333 45555444333222101 0 11 3666677
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 042851 429 VTSVYFMLLWIIFVVLSSL 447 (453)
Q Consensus 429 ~~~~~ll~~Y~~yl~~~~l 447 (453)
++++.+|++|+.++..
T Consensus 158 ---iill~lY~~~L~~~l~ 173 (349)
T TIGR00378 158 ---IVIIIVYVLFLYFQLG 173 (349)
T ss_pred ---HHHHHHHHHHHHHHhh
Confidence 7899999999988764
No 18
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=99.72 E-value=1.1e-17 Score=172.62 Aligned_cols=139 Identities=14% Similarity=0.151 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhh
Q 042851 284 IAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVG 363 (453)
Q Consensus 284 ~~f~~~i~~i~~~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillv 363 (453)
.+|+.+++.+..++++++++++.+|+++|+| +|.+++|.|||+||+++|+.|+ .+|++|++.||++|||++|++++
T Consensus 38 ~~F~~~~~~li~~a~~lv~~a~~lA~~~G~~---vG~ll~a~~ts~pEL~vsi~A~-~~g~~~la~gnivGS~i~NilLI 113 (365)
T TIGR00846 38 VIFLLNLLGIIPLAERVSFATEQLAHRLGPT---LGGLLNATFGNAVELIISLMAL-GEGKVEVVRASLLGSILSNLLLV 113 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc---hhhHHHHHHhHHHHHHHHHHHc-cCCcHHHHHHHHHHHHHHHHHHH
Confidence 6788999999999999999999999999998 6777889999999999999999 79999999999999999999999
Q ss_pred hhHHHHHHhhhccccccccEEEe-cCCCchhHH-----HHHHHHHHHHHHH-H-HH-hCC-----cccccccccchhhHH
Q 042851 364 IGIPWLIDTAYNFIVYKEPLRVQ-NAEGLSFSL-----LVFFCTSVGCIAV-L-VL-RRL-----TLGAELGGPKLWAWV 429 (453)
Q Consensus 364 LGl~~li~~~~~~~~~~~pi~v~-~~~~l~~~~-----~~l~~~~~l~~~~-~-~~-~~~-----~i~r~~G~~~~~~~~ 429 (453)
+|+++++. |++.. ++ .+..+. .++.++.+.+++. . .. .++ .++|.+|
T Consensus 114 lGl~~l~~----------~~~~~~~~-~~~~~~~~~~~~ll~~~~~~l~lp~~~~~~~~~~~~~~~ls~~~g-------- 174 (365)
T TIGR00846 114 LGLSLFLG----------GIKNIREQ-RFNRGAAQVNSALLLLAILSLVLPLALPAGKPGQDSILGLSRGIA-------- 174 (365)
T ss_pred HHHHHHHh----------ccCcccee-eccHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchhHHHHHHHH--------
Confidence 99999984 44331 11 122222 2222222211111 1 01 122 4778888
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 042851 430 TSVYFMLLWIIFVVLSSL 447 (453)
Q Consensus 430 ~~~~ll~~Y~~yl~~~~l 447 (453)
++++.+|++|+.++..
T Consensus 175 --iill~ly~~yl~~~~~ 190 (365)
T TIGR00846 175 --IVMLILYGAFLVFQLV 190 (365)
T ss_pred --HHHHHHHHHHHHHHhc
Confidence 7899999999987764
No 19
>PLN03151 cation/calcium exchanger; Provisional
Probab=99.72 E-value=5.4e-17 Score=177.22 Aligned_cols=134 Identities=16% Similarity=0.173 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhhhHHHHHHhh
Q 042851 294 SGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTA 373 (453)
Q Consensus 294 ~~~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvLGl~~li~~~ 373 (453)
..+++.++.+.+.+++.+++||.++|+|++|+|||.||+++|+.|....+++|+++||++||++||+++++|+.+++.
T Consensus 156 ~ta~dyF~p~l~~Is~~L~lse~vAGvTlLAfGNsaPDlf~si~a~~~~~~~~l~ig~ilGs~lf~~~vV~G~v~l~~-- 233 (650)
T PLN03151 156 NTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGKDAGEVGLNSVLGGAVFVTCVVVGIVSLCV-- 233 (650)
T ss_pred HHHHHHhhHHHHHHHHHhCCCHHHHHHHHHHHhCCcHHHHHHHHHHHcCCCCceeeehhhhHHHHHHHHHHHHHHHhc--
Confidence 348999999999999999999999999999999999999999988733478999999999999999999999999873
Q ss_pred hccccccccEEEecCCCchhHHHHHHHHHHHHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 042851 374 YNFIVYKEPLRVQNAEGLSFSLLVFFCTSVGCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVVLSSL 447 (453)
Q Consensus 374 ~~~~~~~~pi~v~~~~~l~~~~~~l~~~~~l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~~~l 447 (453)
..+|+++++. .+.+|+.+++++..++..+ ..++++++++| +.++.+|++|++....
T Consensus 234 -----~~~pf~v~~~-~f~RD~~F~lla~~~l~~~--l~~g~v~~~ea----------i~ll~lY~~Yv~vv~~ 289 (650)
T PLN03151 234 -----ADKEVQIDKR-CFIRDLCFFLFTLVSLLVI--LMVGKVTVGGA----------IAFVSIYVVYAFLVAA 289 (650)
T ss_pred -----cCCceeecch-hHHHhHHHHHHHHHHHHHH--HHcCeEhHHHH----------HHHHHHHHHHHHHHHh
Confidence 1257899887 8889999888876655533 46788999999 7999999999976654
No 20
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.58 E-value=1.2e-15 Score=156.60 Aligned_cols=130 Identities=22% Similarity=0.205 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhhhHHHHHHhhhc
Q 042851 296 IAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYN 375 (453)
Q Consensus 296 ~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvLGl~~li~~~~~ 375 (453)
.-+.+|-+-+.|.+.+|+|+.|.|.|++|+|+|.||++||++.. .--++|..+|.|+||..||||.++|++.+++
T Consensus 75 CDefFVPSL~vItEkL~iSdDVAGATFMAAGgSAPElFTSvIGV-FIt~~dVGiGTIVGSAvFNIL~Vig~C~LFS---- 149 (588)
T KOG1307|consen 75 CDEFFVPSLDVITEKLGISDDVAGATFMAAGGSAPELFTSVIGV-FITQGDVGIGTIVGSAVFNILCVIGVCGLFS---- 149 (588)
T ss_pred hcccccccHHHHHHHhcCcccccchhhhhccCCchHHhhhheeE-EEecCCcceeeeeehhhhhHHHHHHHHHhhc----
Confidence 57789999999999999999999999999999999999999998 4689999999999999999999999999994
Q ss_pred cccccccEEEecCCCchhHHHHHHHHHHHHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 042851 376 FIVYKEPLRVQNAEGLSFSLLVFFCTSVGCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVVLSSL 447 (453)
Q Consensus 376 ~~~~~~pi~v~~~~~l~~~~~~l~~~~~l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~~~l 447 (453)
++.+.++.- .+.+|+.+..+..+.++.+ +.+.++.++|. ++|+..|+.|.+++-.
T Consensus 150 ----rqvl~LtWW-PLfRD~sfY~lsl~~Li~F--f~D~~I~WwEa----------L~L~~~Yi~Yv~~MKf 204 (588)
T KOG1307|consen 150 ----RQVLNLTWW-PLFRDVSFYTLSLIMLIYF--FLDELIMWWEA----------LALLLMYISYVVFMKF 204 (588)
T ss_pred ----ccccccccc-hhhhhhHHHHHHHHHHHHH--HHhhHHHHHHH----------HHHHHHHHHHheeeeh
Confidence 256777766 7888998888877666544 57999999999 7899999999876543
No 21
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=99.56 E-value=3.4e-15 Score=132.20 Aligned_cols=113 Identities=19% Similarity=0.240 Sum_probs=81.8
Q ss_pred ccCcccccceeeeccCChhHHHHHHHHHHhhccccCCCCccchhhhhhhhhhhHhHhhhheecccccccccccccchhhH
Q 042851 3 RCGITPSDIALLAFGTSFPQISLATIDAIRSIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLV 82 (453)
Q Consensus 3 ~~~~~VaGlTivA~GTSaPEL~vSiia~~~~~~~~~~~digvGnIVGS~IfNillIlGl~al~~p~~~~~~~~~~~~~~~ 82 (453)
-+|+.+.|+|++|++||+||+++++.++.+ +++++++||++|||++|++++.|++.++.+....+ .+.+....
T Consensus 22 ~i~~~~~g~~lla~~~slpe~~~~~~~~~~-----g~~~la~~~~~Gs~~~~~~l~~gl~~l~~~~~~~~--~~~~~~~~ 94 (140)
T PF01699_consen 22 GISESFLGLTLLALATSLPELIVAISAARK-----GNPDLAIGNIIGSNIFNITLIVGLILLFGPIKLGS--QTIDWSSF 94 (140)
T ss_dssp TB-HCCHHHCCHHCCCCHHHHHHHHHHHCT-----T-CHHHHHHHHHHHHHHHHTHHHHHHHHS-B-----------HHH
T ss_pred CCCHHHHHHHHHHHHcCHHHHHHHHHHhhc-----cccchhhhcccchHHHHHHHHHHHHHHhccccccc--cccccchH
Confidence 478999999999999999999999999987 69999999999999999999999999999864322 11222223
Q ss_pred HHHHHHHHHHHH-HHHHHHHc----CCcchHHHHHHHHHHHHHHHHH
Q 042851 83 ELFWSFWAYVWL-YIILEVWT----PNVITFWEALLTVLQYGLLLIH 124 (453)
Q Consensus 83 ~~~~~~~~y~~~-~ill~~~~----dg~i~~~Eg~ill~~~~~yl~~ 124 (453)
.+++..++.. .++..+.. ++++++++|++++.+|++|+++
T Consensus 95 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~y~~y~~~ 139 (140)
T PF01699_consen 95 --TRDFSFLLLAILLLILFFLAFIRDGRISRFEGLVLLILYILYLVF 139 (140)
T ss_dssp --HHHHHHHHHHHHHHHHCCT---HCT-BSHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHcCCeEhHHHHHHHHHHHHHHHhc
Confidence 2333333332 22233333 8999999999999999999875
No 22
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=99.45 E-value=1.1e-13 Score=154.40 Aligned_cols=61 Identities=20% Similarity=0.260 Sum_probs=57.3
Q ss_pred cCcccccceeeeccCChhHHHHHHHHHHhhccccCCCCccchhhhhhhhhhhHhHhhhheecccc
Q 042851 4 CGITPSDIALLAFGTSFPQISLATIDAIRSIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKA 68 (453)
Q Consensus 4 ~~~~VaGlTivA~GTSaPEL~vSiia~~~~~~~~~~~digvGnIVGS~IfNillIlGl~al~~p~ 68 (453)
.++.|+|+|++|+|||+||+++|++|+.++ +..|+++||++|||+||+++++|+++++.+.
T Consensus 786 i~~~viGlt~vA~GTSlPEl~~S~~aA~~~----~~~d~aigNv~GSNifNi~l~lGv~~~i~~~ 846 (928)
T TIGR00845 786 LKDSVTAVVFVALGTSVPDTFASKVAATQD----QYADASIGNVTGSNAVNVFLGIGVAWSIAAI 846 (928)
T ss_pred CCHHhhhheeeeEecCcHHHHHHHHHHHcC----CCCceeEEeecchHHHHHHHHHHHHHHHhhh
Confidence 588999999999999999999999999984 5699999999999999999999999999864
No 23
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=99.44 E-value=7.3e-12 Score=126.99 Aligned_cols=286 Identities=13% Similarity=0.065 Sum_probs=182.9
Q ss_pred cceeeeccCChhHHHHHHHHHHhhccccCCCCccchhhhhhhhhhhHhHhhhheecccccccccccccchhhHHHHHHHH
Q 042851 10 DIALLAFGTSFPQISLATIDAIRSIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELFWSFW 89 (453)
Q Consensus 10 GlTivA~GTSaPEL~vSiia~~~~~~~~~~~digvGnIVGS~IfNillIlGl~al~~p~~~~~~~~~~~~~~~~~~~~~~ 89 (453)
|.-+-|+=.++=|++++++|.-+ ++..+-=|..+||-.-|+++++|+|-..-.+. ||..+.+...-......+
T Consensus 129 GgllNAtfGnaiElii~ilALk~-----g~~riVq~SlLGSILsnlLLvlG~s~~~Ggi~--rk~Q~Fn~~~A~v~s~lL 201 (441)
T KOG1397|consen 129 GGLLNATFGNAIELIIYILALKN-----GKVRIVQGSLLGSILSNLLLVLGLSLFCGGIR--RKDQRFNIKSAGVNSALL 201 (441)
T ss_pred HHHHhhhhccHHHHHHHHHHhhc-----CceEEEehhhHHHHHHHHHHHhhHHHhhcccc--cceeecccchhhHHHHHH
Confidence 44455666789999999999876 68888889999999999999999998887543 555555532222211111
Q ss_pred HHHHHHH----HHHHHcC-----C-------cchHHHHHHHHHHHHHHHHHHHHhhccCccccccccccCCCCCCCcccc
Q 042851 90 AYVWLYI----ILEVWTP-----N-------VITFWEALLTVLQYGLLLIHAYAQDKRWPYLSLPIARTERPEDWVPQET 153 (453)
Q Consensus 90 ~y~~~~i----ll~~~~d-----g-------~i~~~Eg~ill~~~~~yl~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 153 (453)
....+.. ++-...+ + .++|--++++++.|++|+++..+..||.+ . ..
T Consensus 202 l~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~lSr~~SivmliaYi~~L~FqL~t~~h~~---------~------~~-- 264 (441)
T KOG1397|consen 202 LLAVLGILLPTVLHYTYGGEVHDCSSGGAILPLSRGCSIVMLIAYIAYLWFQLKTARHIW---------Q------FP-- 264 (441)
T ss_pred HHHHHHHHHHHHHHHhcCccccccCCccceeeehhccHHHHHHHHHHHHHHhhhcccccC---------C------CC--
Confidence 1111111 1111122 1 26899999999999999998876533210 0 00
Q ss_pred CCCCCCCCccccccccccccccCcccceeeeeccCCCCcccCCccccCCCCcchhhhhhhhhhhhcccCCccccchhhhh
Q 042851 154 TSCKDENCDYDECSEILQLGEDENRGVVDIFSIHSPNGAVTSPLYQKVPGSEDVAEISKESFREEINSELPHVHALWKQQ 233 (453)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 233 (453)
+ . .||+ + +. +|+..++ ++.+..+.
T Consensus 265 ~------~-~ee~----------------------~---------~~----d~~~s~~----------~e~p~is~---- 288 (441)
T KOG1397|consen 265 T------P-DEEE----------------------T---------EQ----DDEVSNE----------DEAPNISR---- 288 (441)
T ss_pred C------C-Chhc----------------------c---------cc----ccccccc----------CCCCcchH----
Confidence 0 0 0000 0 00 0000001 01111122
Q ss_pred hhhhhcccCchhhhhhhhhHHHHHHHHHHhhhhhhhheeecCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 042851 234 FVDSIALESPESRKMNNIYLRLARIFWQSLLVPWRVLFAFVPPYHIAHGWIAFICSLIFISGIAYIVTKLTDIISCVTGI 313 (453)
Q Consensus 234 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~vpp~~~~~~~~~f~~~i~~i~~~s~~lv~~a~~ia~~~gi 313 (453)
|+.+.|+ .+.-+++.+.|+++|+..+...+.+|+
T Consensus 289 ---------------------~ss~~~L-------------------------~~~T~~vsllaeyLV~~Id~~~ds~~l 322 (441)
T KOG1397|consen 289 ---------------------WSSIIWL-------------------------LIMTLLVSLLAEYLVDTIDDVSDSWGL 322 (441)
T ss_pred ---------------------HHHHHHH-------------------------HHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 2445553 234566778899999999999999999
Q ss_pred ChhhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhhhHHHHHHhhhccccccccEEEecCCCchh
Q 042851 314 NAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAYNFIVYKEPLRVQNAEGLSF 393 (453)
Q Consensus 314 s~~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvLGl~~li~~~~~~~~~~~pi~v~~~~~l~~ 393 (453)
|+.++|++++++-----|-+.+++-| .|++-|+++|=.+||.+-=-+++...+-++. +.-+.+...+-+ .+
T Consensus 323 s~~FiglillpiVgNaaEh~~AI~fA-~k~kldLslgVaigsalQI~Lf~vP~~v~v~-----W~~g~~M~LnF~---~~ 393 (441)
T KOG1397|consen 323 SVKFIGLILLPIVGNAAEHAGAISFA-MKDKLDLSLGVAIGSALQIALFVVPFSVIVG-----WIMGISMDLNFP---LL 393 (441)
T ss_pred ChhhheeeeecccCchHHhhcceeee-ecCcccchhhhhhhhhHhHHHhhhhHHHHhh-----hhcCCceEEecc---HH
Confidence 99999999999988899999999999 5899999999999999877677666554442 122345554422 23
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHH
Q 042851 394 SLLVFFCTSVGCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFV 442 (453)
Q Consensus 394 ~~~~l~~~~~l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl 442 (453)
+...++++ +++..++ +.+++-+..+| ..++.+|++-.
T Consensus 394 et~~l~is-Vfl~~y~-lqdG~Sny~kG----------~mLll~Y~Iia 430 (441)
T KOG1397|consen 394 ETACLFIS-VFLVAYL-LQDGKSNYFKG----------LMLLLCYLIIA 430 (441)
T ss_pred HHHHHHHH-HHHHHHH-HhcCchhHHHH----------HHHHHHHHHHH
Confidence 44433333 3333343 67888889999 78999998644
No 24
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=99.29 E-value=3e-10 Score=115.74 Aligned_cols=138 Identities=15% Similarity=0.097 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhhhHH
Q 042851 288 CSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIP 367 (453)
Q Consensus 288 ~~i~~i~~~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvLGl~ 367 (453)
++.+.++..|+.++...+...+.+|.|+.++|+++.++=--.||..+++.+| +||+-|.+++=..||-+--+++....-
T Consensus 228 ~~tv~v~~lae~lv~~le~~l~~~g~~~~F~G~iIa~lVgn~~E~~tAi~aA-~~~~mqls~nia~Gsalq~~lltiP~l 306 (368)
T COG0387 228 IATVLVALLAEILVGSLEAVLESLGAPPAFVGLIIAALVGNAPEHLTALRAA-LNNRMQLSMNIAMGSALQTALLTIPVL 306 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccCHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667777889999999999999999999999999999988899999999999 799999999999999988877766554
Q ss_pred HHHHhhhccccccccEEEecCCCchhHHHHHHHHHHHHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHHHHHH
Q 042851 368 WLIDTAYNFIVYKEPLRVQNAEGLSFSLLVFFCTSVGCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVVLSS 446 (453)
Q Consensus 368 ~li~~~~~~~~~~~pi~v~~~~~l~~~~~~l~~~~~l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~~~ 446 (453)
.++.-. .++|....- -..+...++.+.+++- .. .+++|-++.+| ..++.+|.+|+....
T Consensus 307 vlis~~-----~gqpm~l~~---~~~elV~l~~~v~~~~-~~-~sdG~sn~leG----------~~lL~lya~~~~~ff 365 (368)
T COG0387 307 VLISLF-----TGQPLTLGF---GPPELVLLVVTVFLAN-IL-FSDGRTNWLEG----------VVLLALYAIYAMLFF 365 (368)
T ss_pred HHHHHH-----hCCCccccC---CHHHHHHHHHHHHHHH-Hh-cCCCchHHHHH----------HHHHHHHHHHHHHHh
Confidence 444311 246765542 2456655555444433 32 68899999999 789999999987654
No 25
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=99.12 E-value=4.5e-09 Score=108.10 Aligned_cols=137 Identities=12% Similarity=0.044 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhhhHH
Q 042851 288 CSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIP 367 (453)
Q Consensus 288 ~~i~~i~~~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvLGl~ 367 (453)
.+.+.+...|+.++...+...+.+|+|+.++|+.+ |+=--.||-++++.+| +|++-|.+++-++||-+-=+++....-
T Consensus 229 v~lv~Vv~lAe~lv~sIe~~v~~~Glp~afiGvII-aiv~~apE~~tAV~aA-~kNkmq~slnialGSsLq~illtvP~l 306 (366)
T PRK10599 229 IHLIAVIAVTKMNASPLETLLTSMNAPVAFTGFLV-ALLILSPEGLGALKAV-LNNQVQRAMNLFFGSVLATISLTVPVV 306 (366)
T ss_pred HHHHHHHHHHHHhHhhHHHHHHhcCCCHHHHHHHH-HHHHcchhHHHHHHHH-HcCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666677799999999999999999999999876 6666699999999999 899999999999999999998888777
Q ss_pred HHHHhhhccccccccEEEecCCCchhHHHHHHHHHHHHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHHHHHH
Q 042851 368 WLIDTAYNFIVYKEPLRVQNAEGLSFSLLVFFCTSVGCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVVLSS 446 (453)
Q Consensus 368 ~li~~~~~~~~~~~pi~v~~~~~l~~~~~~l~~~~~l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~~~ 446 (453)
.++.-.. ++|+...=+ .++...++. +++.... .++++|-++.+| ..++.+|..|+.++.
T Consensus 307 vlig~~~-----g~pm~L~f~---~~e~vlL~l-tv~v~~~-t~~dGrsN~LeG----------~~hL~lf~~y~~l~~ 365 (366)
T PRK10599 307 TLIAFLT-----GNELQFGLG---APEMVVMVA-SLVLCHI-SFSTGRTNVLNG----------AAHLALFAAYLMTIF 365 (366)
T ss_pred HHHHHHh-----CCCeEecCC---HHHHHHHHH-HHHHHHh-ccCCCchHHHHH----------HHHHHHHHHHHHHHh
Confidence 6664322 467776532 244444433 3332222 257899999999 789999999998765
No 26
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=98.55 E-value=6.6e-08 Score=105.11 Aligned_cols=131 Identities=18% Similarity=0.237 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhhhHHHHHHhhh
Q 042851 295 GIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGIGIPWLIDTAY 374 (453)
Q Consensus 295 ~~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvLGl~~li~~~~ 374 (453)
...+..--+.+.++..+.+||.+.|+|++|+|+..||+++|+.|......+|+++++++|+-+|-..+++|+-.+.
T Consensus 121 ~a~~yFspsL~~is~~L~l~esvAGVTlLa~GNgapDvf~siasv~~~~~~~~~~~~~lg~alFVt~~V~G~i~~t---- 196 (605)
T KOG2399|consen 121 TADDYFSPSLSSISSLLRLSESVAGVTLLAFGNGAPDVFASIASVRGTPKGDLALNDLLGGALFVTTVVVGLIILT---- 196 (605)
T ss_pred HHHHhcChHHHHHHHHhcCCCceeeEEEeeecCCCchHHhhhheeecCCCcccHHHHHhccceeEEeeEeeeeeee----
Confidence 3566777888999999999999999999999999999999999875555679999999999999999999997776
Q ss_pred ccccccccEEEecCCCchhHHHHHHHHHHHHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 042851 375 NFIVYKEPLRVQNAEGLSFSLLVFFCTSVGCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVVLSSL 447 (453)
Q Consensus 375 ~~~~~~~pi~v~~~~~l~~~~~~l~~~~~l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~~~~l 447 (453)
+|++++.. ...+|..+++..+.++..+. .+..++.-+.. ..++..|..|......
T Consensus 197 ------~pFki~~~-~~iRDi~Fll~al~~l~~~~-~~~~~v~~~~~----------l~fl~~y~~Yv~~vi~ 251 (605)
T KOG2399|consen 197 ------KPFKINAN-SFIRDILFLLLALLFLAFIL-LRGNKVEIWMA----------LTFLGIYVVYVVTVIV 251 (605)
T ss_pred ------cceeeccc-hhHHHHHHHHHHHHHHHHHH-hcCCceeHHhH----------HHHhHHHHHHHHHHHH
Confidence 68999876 77889999888776655443 45557877777 6788999888875553
No 27
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.62 E-value=2.1e-05 Score=82.57 Aligned_cols=58 Identities=21% Similarity=0.291 Sum_probs=52.6
Q ss_pred CcccccceeeeccCChhHHHHHHHHHHhhccccCCCCccchhhhhhhhhhhHhHhhhheecc
Q 042851 5 GITPSDIALLAFGTSFPQISLATIDAIRSIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVP 66 (453)
Q Consensus 5 ~~~VaGlTivA~GTSaPEL~vSiia~~~~~~~~~~~digvGnIVGS~IfNillIlGl~al~~ 66 (453)
+|.|...|+||+|||.|..|.|-+|+.+. .-.|=++||+-|||..|+++=+|+.=.+.
T Consensus 459 kdsVtA~~~vA~GTS~PDtfASkiAA~~d----~~AD~~igNvTgSNaVNvflGiG~aW~ia 516 (596)
T KOG1306|consen 459 KDSVTAVTFVALGTSVPDTFASKIAAEQD----QTADASIGNVTGSNAVNVFLGIGLAWSIA 516 (596)
T ss_pred ccceeeeeeehhcCCCcHHHHHHHHHhhc----ccccccccceecccceeEEEeccHHHHHH
Confidence 57899999999999999999999999974 67799999999999999999999876654
No 28
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=97.06 E-value=0.0082 Score=62.12 Aligned_cols=84 Identities=18% Similarity=0.110 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhhh
Q 042851 285 AFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVGI 364 (453)
Q Consensus 285 ~f~~~i~~i~~~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillvL 364 (453)
.|..+++.+.=.++.+....+++++..|-. +|..+=|.-.+.=|++.++.|- +||+..+.=+..+||-.-|+++++
T Consensus 98 vF~lsll~iiPLA~~l~~ateqls~~tg~t---vGgllNAtfGnaiElii~ilAL-k~g~~riVq~SlLGSILsnlLLvl 173 (441)
T KOG1397|consen 98 VFLLSLLGIIPLAERLGFATEQLSAYTGPT---VGGLLNATFGNAIELIIYILAL-KNGKVRIVQGSLLGSILSNLLLVL 173 (441)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHhhcCCc---HHHHHhhhhccHHHHHHHHHHh-hcCceEEEehhhHHHHHHHHHHHh
Confidence 577888888888999999999999998865 7777888888899999999997 899999999999999999999999
Q ss_pred hHHHHHHh
Q 042851 365 GIPWLIDT 372 (453)
Q Consensus 365 Gl~~li~~ 372 (453)
|++.....
T Consensus 174 G~s~~~Gg 181 (441)
T KOG1397|consen 174 GLSLFCGG 181 (441)
T ss_pred hHHHhhcc
Confidence 99877643
No 29
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=96.98 E-value=0.0081 Score=62.04 Aligned_cols=153 Identities=14% Similarity=0.190 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhhhhcccChhHHHHHHHHHHhcCCCCceeehhccchhhHHHhh
Q 042851 284 IAFICSLIFISGIAYIVTKLTDIISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQITADSAIANITCSNSVNIYVG 363 (453)
Q Consensus 284 ~~f~~~i~~i~~~s~~lv~~a~~ia~~~gis~~viGlTivA~GTSlPEl~tSi~aa~~~g~~diAigNiiGSNifNillv 363 (453)
..|+.+++.++..+..+++.++.+|.+.|-| .|-.+.|.--.+=|++-...+- ++|++.++=+.+.||-+-|++++
T Consensus 37 ~~fi~~~l~i~plA~~v~~aaE~lA~~vG~~---~G~Lina~f~~~iEvil~~~al-~~G~~~lvr~Si~gsIm~~~llv 112 (368)
T COG0387 37 VIFIAALLAIIPLAFSVVRAAEVLAARVGEP---YGSLINALFGNAIEVILIVAAL-KSGSPTLVRDSLYGSIMINLLLV 112 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc---hhHHHHHHHHHHHHHHHHHHHH-hCCCchhhHHHHHHHHHHHHHHH
Confidence 5677888888889999999999999999988 7888888888888999998776 89999999999999999999999
Q ss_pred hhHHHHHHhhhccccccccEEEecCCCchhHHHHHHHHHHHHHHHHHHhCCcccccccccchhhHHHHHHHHHHHHHHHH
Q 042851 364 IGIPWLIDTAYNFIVYKEPLRVQNAEGLSFSLLVFFCTSVGCIAVLVLRRLTLGAELGGPKLWAWVTSVYFMLLWIIFVV 443 (453)
Q Consensus 364 LGl~~li~~~~~~~~~~~pi~v~~~~~l~~~~~~l~~~~~l~~~~~~~~~~~i~r~~G~~~~~~~~~~~~ll~~Y~~yl~ 443 (453)
+|++.++...-++ .+++.... .=.+...+...+.+.+++-. +.+..-.+..- ...-..++++++..|.+|+.
T Consensus 113 ~GlslllGglr~~---~Q~fN~~~--a~~~~~~L~~~~~ialv~P~-~~~~~~~~~~~--~~~s~~~avv~i~~Y~lfL~ 184 (368)
T COG0387 113 VGLSLLLGGLRHK---TQPFNPHG--AGTYLALLFTAATIALVLPT-FFPYTGGGNFS--LGQSLFVAVVLIALYGLFLF 184 (368)
T ss_pred HHHHHHHcchhhc---eeecchhh--HHHHHHHHHHHHHHHhhhhh-hhcccCCCcch--HhHHHHHHHHHHHHHHHHHH
Confidence 9999999765322 13332221 11122222222222222222 22211111100 11222466889999999998
Q ss_pred HHHHH
Q 042851 444 LSSLK 448 (453)
Q Consensus 444 ~~~l~ 448 (453)
++--.
T Consensus 185 fql~t 189 (368)
T COG0387 185 FQLKT 189 (368)
T ss_pred hhhhh
Confidence 76543
No 30
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=96.33 E-value=0.0055 Score=63.61 Aligned_cols=111 Identities=9% Similarity=0.012 Sum_probs=80.1
Q ss_pred cCcccccceeeeccCChhHHHHHHHHHHhhccccCCCCccchhhhhhhhhhhHhHhhhheecccccccccccccchhhHH
Q 042851 4 CGITPSDIALLAFGTSFPQISLATIDAIRSIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVE 83 (453)
Q Consensus 4 ~~~~VaGlTivA~GTSaPEL~vSiia~~~~~~~~~~~digvGnIVGS~IfNillIlGl~al~~p~~~~~~~~~~~~~~~~ 83 (453)
+|+..+|+.+ |+=.-+||-.+++.++.+ ++=|.+++-.+||...=+++.+-+..++.-.- .+...+...|..
T Consensus 254 lp~afiGvII-aiv~~apE~~tAV~aA~k-----Nkmq~slnialGSsLq~illtvP~lvlig~~~--g~pm~L~f~~~e 325 (366)
T PRK10599 254 APVAFTGFLV-ALLILSPEGLGALKAVLN-----NQVQRAMNLFFGSVLATISLTVPVVTLIAFLT--GNELQFGLGAPE 325 (366)
T ss_pred CCHHHHHHHH-HHHHcchhHHHHHHHHHc-----CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCeEecCCHHH
Confidence 5788889765 777789999999999997 59999999999999999888877766665421 123333333332
Q ss_pred HHHHHHHHHHHHH-HHHHHcCCcchHHHHHHHHHHHHHHHHHHH
Q 042851 84 LFWSFWAYVWLYI-ILEVWTPNVITFWEALLTVLQYGLLLIHAY 126 (453)
Q Consensus 84 ~~~~~~~y~~~~i-ll~~~~dg~i~~~Eg~ill~~~~~yl~~~~ 126 (453)
. .....+++ ......||+-+|.||..++.+|..|++..+
T Consensus 326 ~----vlL~ltv~v~~~t~~dGrsN~LeG~~hL~lf~~y~~l~~ 365 (366)
T PRK10599 326 M----VVMVASLVLCHISFSTGRTNVLNGAAHLALFAAYLMTIF 365 (366)
T ss_pred H----HHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 2 11122222 223347999999999999999999998653
No 31
>PRK14750 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=28.47 E-value=93 Score=20.61 Aligned_cols=23 Identities=22% Similarity=0.040 Sum_probs=18.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHh
Q 042851 106 ITFWEALLTVLQYGLLLIHAYAQ 128 (453)
Q Consensus 106 i~~~Eg~ill~~~~~yl~~~~~~ 128 (453)
++..-|.++++++..|++|...+
T Consensus 3 ~~vi~g~llv~lLl~YLvYAL~n 25 (29)
T PRK14750 3 FSIVCGALLVLLLLGYLVYALFN 25 (29)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Confidence 45567888899999999988754
No 32
>PF08370 PDR_assoc: Plant PDR ABC transporter associated; InterPro: IPR013581 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This domain is found on the C terminus of ABC-2 type transporter domains (IPR013525 from INTERPRO). It seems to be associated with the plant pleiotropic drug resistance (PDR) protein family of ABC transporters. Like in yeast, plant PDR ABC transporters may also play a role in the transport of antifungal agents [] (see also IPR010929 from INTERPRO). The PDR family is characterised by a configuration in which the ABC domain is nearer the N terminus of the protein than the transmembrane domain [].
Probab=22.01 E-value=56 Score=25.76 Aligned_cols=26 Identities=27% Similarity=0.485 Sum_probs=22.4
Q ss_pred ccchhhhhhh-hhhhHhHhhhheeccc
Q 042851 42 LGPGTLVGSA-AFDLFPIHAVCVVVPK 67 (453)
Q Consensus 42 igvGnIVGS~-IfNillIlGl~al~~p 67 (453)
||+|..+|.. +||++.+++++-|=.+
T Consensus 31 IgvgaL~G~~vlFNil~~laL~yL~p~ 57 (65)
T PF08370_consen 31 IGVGALLGFIVLFNILFTLALTYLNPL 57 (65)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999976 5899999999987433
Done!