BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042855
(85 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255571379|ref|XP_002526638.1| Photosystem I reaction center subunit N, chloroplast precursor,
putative [Ricinus communis]
gi|223534030|gb|EEF35750.1| Photosystem I reaction center subunit N, chloroplast precursor,
putative [Ricinus communis]
Length = 169
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 13 ETAGEKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGK 72
E +K LA G + A VQFGTCK ENFT QDLAKQKKVPFISDDL LEC+GK
Sbjct: 99 ELNDKKRLATSGAN--FARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGK 156
Query: 73 DKYKCGSNVFWKW 85
DKYKCGSNVFWKW
Sbjct: 157 DKYKCGSNVFWKW 169
>gi|224093408|ref|XP_002309915.1| predicted protein [Populus trichocarpa]
gi|222852818|gb|EEE90365.1| predicted protein [Populus trichocarpa]
Length = 172
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 46/52 (88%)
Query: 34 NVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 85
VQFGTCK ENFT QDLAKQKKVPFISDDL LEC+GKDKYKCGSNVFWKW
Sbjct: 121 TVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 172
>gi|118488894|gb|ABK96256.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118489284|gb|ABK96447.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 172
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 46/52 (88%)
Query: 34 NVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 85
VQFGTCK ENFT QDLAKQKKVPFISDDL LEC+GKDKYKCGSNVFWKW
Sbjct: 121 TVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 172
>gi|357464531|ref|XP_003602547.1| Photosystem I reaction center subunit N [Medicago truncatula]
gi|355491595|gb|AES72798.1| Photosystem I reaction center subunit N [Medicago truncatula]
gi|388492560|gb|AFK34346.1| unknown [Medicago truncatula]
Length = 172
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Query: 18 KGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKC 77
K LA G + A VQFGTCK ENFT QDLAKQKKVPFI++DLELEC+GKDKYKC
Sbjct: 107 KRLATSGAN--FARAYTVQFGTCKFPENFTGCQDLAKQKKVPFITEDLELECEGKDKYKC 164
Query: 78 GSNVFWKW 85
GSNVFWKW
Sbjct: 165 GSNVFWKW 172
>gi|449461859|ref|XP_004148659.1| PREDICTED: photosystem I reaction center subunit N,
chloroplastic-like [Cucumis sativus]
Length = 171
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 13 ETAGEKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGK 72
E +K LA G + A V+FGTCK ENFT QDLAKQKKVPFI+DDLELEC+GK
Sbjct: 101 ELNDKKRLATSGAN--FARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGK 158
Query: 73 DKYKCGSNVFWKW 85
DKYKCGSNVFWKW
Sbjct: 159 DKYKCGSNVFWKW 171
>gi|449507490|ref|XP_004163047.1| PREDICTED: photosystem I reaction center subunit N,
chloroplastic-like [Cucumis sativus]
Length = 171
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 13 ETAGEKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGK 72
E +K LA G + A V+FGTCK ENFT QDLAKQKKVPFI+DDLELEC+GK
Sbjct: 101 ELNDKKRLATSGAN--FARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGK 158
Query: 73 DKYKCGSNVFWKW 85
DKYKCGSNVFWKW
Sbjct: 159 DKYKCGSNVFWKW 171
>gi|270311593|gb|ACZ72945.1| photosystem I reaction center subunit [Nicotiana tabacum]
Length = 168
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 13 ETAGEKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGK 72
E +K LA G + A VQFGTCK ENFT QDLAKQKKVPFISDDL LEC+GK
Sbjct: 98 ELNDKKRLATSGAN--FARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGK 155
Query: 73 DKYKCGSNVFWKW 85
DKYKCGSNVFWKW
Sbjct: 156 DKYKCGSNVFWKW 168
>gi|224080971|ref|XP_002306249.1| predicted protein [Populus trichocarpa]
gi|118486634|gb|ABK95154.1| unknown [Populus trichocarpa]
gi|222855698|gb|EEE93245.1| predicted protein [Populus trichocarpa]
Length = 172
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 13 ETAGEKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGK 72
E +K LA G + A VQFGTCK ENFT QDLAKQKKVPFIS+DL LEC+GK
Sbjct: 102 ELNDKKRLATSGAN--FARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGK 159
Query: 73 DKYKCGSNVFWKW 85
DKYKCGSNVFWKW
Sbjct: 160 DKYKCGSNVFWKW 172
>gi|351722715|ref|NP_001235206.1| uncharacterized protein LOC100499729 [Glycine max]
gi|255626111|gb|ACU13400.1| unknown [Glycine max]
Length = 167
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 54/69 (78%), Gaps = 2/69 (2%)
Query: 17 EKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYK 76
+K LA G + A V+FG+CK ENFT QDLAKQKKVPF+SDDLELEC+GKDKYK
Sbjct: 101 KKRLATTGAN--FARAYTVEFGSCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYK 158
Query: 77 CGSNVFWKW 85
CGSNVFWKW
Sbjct: 159 CGSNVFWKW 167
>gi|351725111|ref|NP_001236569.1| uncharacterized protein LOC100306036 [Glycine max]
gi|255627347|gb|ACU14018.1| unknown [Glycine max]
Length = 166
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 13 ETAGEKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGK 72
E +K LA G + A V+FG+CK ENFT QDLAKQKKVPF+SDDLELEC+GK
Sbjct: 96 ELNDKKRLATTGAN--FARAYTVEFGSCKFPENFTGCQDLAKQKKVPFLSDDLELECEGK 153
Query: 73 DKYKCGSNVFWKW 85
DKYKCGSNVFWKW
Sbjct: 154 DKYKCGSNVFWKW 166
>gi|268612156|pdb|2WSC|N Chain N, Improved Model Of Plant Photosystem I
gi|268612174|pdb|2WSE|N Chain N, Improved Model Of Plant Photosystem I
gi|268612192|pdb|2WSF|N Chain N, Improved Model Of Plant Photosystem I
gi|28629385|gb|AAO49652.1| photosystem I-N subunit [Phaseolus vulgaris]
Length = 170
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 13 ETAGEKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGK 72
E +K LA G + A V+FG+CK ENFT QDLAKQKKVPF+SDDL+LEC+GK
Sbjct: 100 ELNDKKRLATTGAN--FARAYTVEFGSCKFPENFTGCQDLAKQKKVPFLSDDLDLECEGK 157
Query: 73 DKYKCGSNVFWKW 85
DKYKCGSNVFWKW
Sbjct: 158 DKYKCGSNVFWKW 170
>gi|359476926|ref|XP_003631913.1| PREDICTED: photosystem I reaction center subunit N, chloroplastic
[Vitis vinifera]
Length = 173
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 13 ETAGEKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGK 72
E +K LA G + A VQFGTCK ENFT QDLAK+KKVPF+S+DLELEC+G+
Sbjct: 103 ELNDKKRLATSGAN--FARAYTVQFGTCKFPENFTGCQDLAKKKKVPFLSEDLELECEGR 160
Query: 73 DKYKCGSNVFWKW 85
DKYKCGSNVFWKW
Sbjct: 161 DKYKCGSNVFWKW 173
>gi|296088540|emb|CBI37531.3| unnamed protein product [Vitis vinifera]
Length = 127
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 13 ETAGEKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGK 72
E +K LA G + A VQFGTCK ENFT QDLAK+KKVPF+S+DLELEC+G+
Sbjct: 57 ELNDKKRLATSGAN--FARAYTVQFGTCKFPENFTGCQDLAKKKKVPFLSEDLELECEGR 114
Query: 73 DKYKCGSNVFWKW 85
DKYKCGSNVFWKW
Sbjct: 115 DKYKCGSNVFWKW 127
>gi|15237593|ref|NP_201209.1| photosystem I reaction center subunit N [Arabidopsis thaliana]
gi|1709825|sp|P49107.2|PSAN_ARATH RecName: Full=Photosystem I reaction center subunit N,
chloroplastic; Short=PSI-N; Flags: Precursor
gi|1237124|gb|AAA93075.1| PSI-N [Arabidopsis thaliana]
gi|10176952|dbj|BAB10272.1| photosystem I reaction centre subunit psaN precursor [Arabidopsis
thaliana]
gi|17065518|gb|AAL32913.1| photosystem I reaction centre subunit psaN precursor [Arabidopsis
thaliana]
gi|20148531|gb|AAM10156.1| photosystem I reaction center subunit psaN precursor [Arabidopsis
thaliana]
gi|332010449|gb|AED97832.1| photosystem I reaction center subunit N [Arabidopsis thaliana]
Length = 171
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 46/52 (88%)
Query: 34 NVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 85
VQFG+CK ENFT QDLAKQKKVPFIS+D+ LEC+GKDKYKCGSNVFWKW
Sbjct: 120 TVQFGSCKFPENFTGCQDLAKQKKVPFISEDIALECEGKDKYKCGSNVFWKW 171
>gi|330318686|gb|AEC11003.1| photosystem I reaction center subunit N [Camellia sinensis]
Length = 174
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 51/67 (76%), Gaps = 7/67 (10%)
Query: 26 SKRIAVKQ-------NVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCG 78
SKR+A VQFGTCK ENFT QDLAKQKKV F+S+DLELECKGKDKYKCG
Sbjct: 108 SKRLATTDANFARAYTVQFGTCKFPENFTGCQDLAKQKKVKFLSEDLELECKGKDKYKCG 167
Query: 79 SNVFWKW 85
SNVFWKW
Sbjct: 168 SNVFWKW 174
>gi|110631500|gb|ABG81095.1| photosystem I subunit N [Pelargonium x hortorum]
Length = 170
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 46/52 (88%)
Query: 34 NVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 85
VQFG+CK NFT QDLAKQKKVPFISDDLELEC+GK+KYKCGSNVFWKW
Sbjct: 119 TVQFGSCKFPLNFTGCQDLAKQKKVPFISDDLELECEGKEKYKCGSNVFWKW 170
>gi|297797407|ref|XP_002866588.1| photosystem I reaction center subunit psi-N [Arabidopsis lyrata
subsp. lyrata]
gi|297312423|gb|EFH42847.1| photosystem I reaction center subunit psi-N [Arabidopsis lyrata
subsp. lyrata]
Length = 171
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 46/52 (88%)
Query: 34 NVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 85
VQFG+CK ENFT QDLAKQKKVPFIS+DL LEC+GKDKY+CGSNVFWKW
Sbjct: 120 TVQFGSCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKYQCGSNVFWKW 171
>gi|357160594|ref|XP_003578814.1| PREDICTED: photosystem I reaction center subunit N,
chloroplastic-like [Brachypodium distachyon]
Length = 142
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 47/57 (82%)
Query: 29 IAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 85
A VQFG+CK NFT QDLAKQKKVPFISDDLE+EC+GK+KYKCGSNVFWKW
Sbjct: 86 FARAYTVQFGSCKFPYNFTGCQDLAKQKKVPFISDDLEIECEGKEKYKCGSNVFWKW 142
>gi|37927472|gb|AAP69817.1| putative photosystem I reaction center subunit N precursor,
partial [Vitis vinifera]
Length = 85
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 13 ETAGEKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGK 72
E +K LA G + A VQFGTCK ENFT QDLAK+KKVPF+S+DLELEC+G+
Sbjct: 15 ELNDKKRLATSGAN--FARAYTVQFGTCKFPENFTGCQDLAKKKKVPFLSEDLELECEGR 72
Query: 73 DKYKCGSNVFWKW 85
DKYKCGSNVFWKW
Sbjct: 73 DKYKCGSNVFWKW 85
>gi|149242539|pdb|2O01|N Chain N, The Structure Of A Plant Photosystem I Supercomplex At
3.4 Angstrom Resolution
gi|303324976|pdb|3LW5|N Chain N, Improved Model Of Plant Photosystem I
Length = 85
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 13 ETAGEKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGK 72
E +K LA G + A V+FG+CK ENFT QDLAKQKKVPF+SDDL+LEC+GK
Sbjct: 15 ELNDKKRLATTGAN--FARAYTVEFGSCKFPENFTGCQDLAKQKKVPFLSDDLDLECEGK 72
Query: 73 DKYKCGSNVFWKW 85
DKYKCGSNVFWKW
Sbjct: 73 DKYKCGSNVFWKW 85
>gi|312281997|dbj|BAJ33864.1| unnamed protein product [Thellungiella halophila]
Length = 170
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 46/52 (88%)
Query: 34 NVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 85
VQFG+CK +NFT QDLAKQKKVP+IS+DL LEC+GKDKYKCGSNVFWKW
Sbjct: 119 TVQFGSCKFPDNFTGCQDLAKQKKVPYISEDLALECEGKDKYKCGSNVFWKW 170
>gi|115487694|ref|NP_001066334.1| Os12g0189400 [Oryza sativa Japonica Group]
gi|77553228|gb|ABA96024.1| Photosystem I reaction centre subunit N, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|113648841|dbj|BAF29353.1| Os12g0189400 [Oryza sativa Japonica Group]
gi|215765179|dbj|BAG86876.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 149
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
Query: 17 EKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYK 76
+K LA G + A V+FG+C+ NFT QDLAKQKKVPFISDDLE+EC+GK+KYK
Sbjct: 83 KKRLATSGAN--FARAYTVEFGSCQFPYNFTGCQDLAKQKKVPFISDDLEIECEGKEKYK 140
Query: 77 CGSNVFWKW 85
CGSNVFWKW
Sbjct: 141 CGSNVFWKW 149
>gi|218186547|gb|EEC68974.1| hypothetical protein OsI_37722 [Oryza sativa Indica Group]
Length = 144
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 13 ETAGEKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGK 72
E +K LA G + A V+FG+C+ NFT QDLAKQKKVPFISDDLE+EC+GK
Sbjct: 74 ELNDKKRLATSGAN--FARAYTVEFGSCQFPYNFTGCQDLAKQKKVPFISDDLEIECEGK 131
Query: 73 DKYKCGSNVFWKW 85
+KYKCGSNVFWKW
Sbjct: 132 EKYKCGSNVFWKW 144
>gi|116779485|gb|ABK21304.1| unknown [Picea sitchensis]
gi|116782522|gb|ABK22539.1| unknown [Picea sitchensis]
gi|116785741|gb|ABK23841.1| unknown [Picea sitchensis]
gi|116786267|gb|ABK24046.1| unknown [Picea sitchensis]
gi|116790454|gb|ABK25621.1| unknown [Picea sitchensis]
gi|116791670|gb|ABK26066.1| unknown [Picea sitchensis]
gi|116794032|gb|ABK26981.1| unknown [Picea sitchensis]
gi|148906060|gb|ABR16189.1| unknown [Picea sitchensis]
gi|148906990|gb|ABR16639.1| unknown [Picea sitchensis]
gi|148907659|gb|ABR16958.1| unknown [Picea sitchensis]
gi|148908613|gb|ABR17416.1| unknown [Picea sitchensis]
gi|224285754|gb|ACN40592.1| unknown [Picea sitchensis]
gi|224286625|gb|ACN41017.1| unknown [Picea sitchensis]
Length = 173
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 47/57 (82%)
Query: 29 IAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 85
IA VQFGTC++ NFT QDLAK K VPF+S+D++LEC+GKDKYKCGSNVFWKW
Sbjct: 117 IARAYTVQFGTCQVPYNFTGCQDLAKIKNVPFLSEDMKLECEGKDKYKCGSNVFWKW 173
>gi|400879|sp|P31093.1|PSAN_HORVU RecName: Full=Photosystem I reaction center subunit N,
chloroplastic; Short=PSI-N; Flags: Precursor
gi|19095|emb|CAA47056.1| photosystem I subunit N [Hordeum vulgare subsp. vulgare]
gi|326517280|dbj|BAK00007.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 145
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 47/57 (82%)
Query: 29 IAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 85
A VQFG+CK NFT QDLAKQKKVPFI+DDLE+EC+GK+K+KCGSNVFWKW
Sbjct: 89 FARAYTVQFGSCKFPYNFTGCQDLAKQKKVPFITDDLEIECEGKEKFKCGSNVFWKW 145
>gi|194689962|gb|ACF79065.1| unknown [Zea mays]
gi|194690820|gb|ACF79494.1| unknown [Zea mays]
gi|194701756|gb|ACF84962.1| unknown [Zea mays]
gi|194702296|gb|ACF85232.1| unknown [Zea mays]
gi|195641532|gb|ACG40234.1| photosystem I reaction center subunit N [Zea mays]
gi|414878361|tpg|DAA55492.1| TPA: photosystem I reaction center subunit N [Zea mays]
Length = 145
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
Query: 17 EKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYK 76
+K LA G + A V+FG+C+ NFT QDLAKQKKVPFISDDLE+EC+GK+K+K
Sbjct: 79 KKRLATSGAN--FARAYTVEFGSCQFPYNFTGCQDLAKQKKVPFISDDLEIECEGKEKFK 136
Query: 77 CGSNVFWKW 85
CGSNVFWKW
Sbjct: 137 CGSNVFWKW 145
>gi|3914466|sp|O65107.1|PSAN_MAIZE RecName: Full=Photosystem I reaction center subunit N,
chloroplastic; Short=PSI-N; Flags: Precursor
gi|2981214|gb|AAC26197.1| photosystem I complex PsaN subunit precursor, partial [Zea mays]
Length = 112
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 13 ETAGEKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGK 72
E +K LA G + A V+FG+C+ NFT QDLAKQKKVPFISDDLE+EC+GK
Sbjct: 42 ELNDKKRLATSGAN--FARAYTVEFGSCQFPYNFTGCQDLAKQKKVPFISDDLEIECEGK 99
Query: 73 DKYKCGSNVFWKW 85
+K+KCGSNVFWKW
Sbjct: 100 EKFKCGSNVFWKW 112
>gi|326506464|dbj|BAJ86550.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 86
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 47/57 (82%)
Query: 29 IAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 85
A VQFG+CK NFT QDLAKQKKVPFI+DDLE+EC+GK+K+KCGSNVFWKW
Sbjct: 30 FARAYTVQFGSCKFPYNFTGCQDLAKQKKVPFITDDLEIECEGKEKFKCGSNVFWKW 86
>gi|259490749|ref|NP_001159046.1| photosystem I reaction center subunit N [Zea mays]
gi|195644880|gb|ACG41908.1| photosystem I reaction center subunit N [Zea mays]
Length = 145
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 29 IAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 85
A V+FG+C+ NFT QDLAKQKKVPF+SDDLE+EC+GK+K+KCGSNVFWKW
Sbjct: 89 FARAYTVEFGSCQFPYNFTGCQDLAKQKKVPFLSDDLEIECEGKEKFKCGSNVFWKW 145
>gi|293337345|gb|ADE42968.1| putative photosystem I reaction center subunit [Gardenia
jasminoides]
Length = 169
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 44/52 (84%)
Query: 34 NVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 85
VQFG CK ENFT QDLAKQKKV F+SDDL+LE KGKDKYKCGSNVFWKW
Sbjct: 118 TVQFGACKFPENFTGCQDLAKQKKVLFLSDDLDLERKGKDKYKCGSNVFWKW 169
>gi|413916437|gb|AFW56369.1| photosystem I reaction center subunit N [Zea mays]
Length = 145
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 29 IAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 85
A V+FG+C+ NFT QDLAKQKKVPF+SDDLE+EC+GK+K+KCGSNVFWKW
Sbjct: 89 FARAYTVEFGSCQFPYNFTGCQDLAKQKKVPFLSDDLEIECEGKEKFKCGSNVFWKW 145
>gi|148905772|gb|ABR16050.1| unknown [Picea sitchensis]
Length = 172
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Query: 29 IAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 85
IA VQFGTC++ NFT QDLAK K VPF+S+D++LEC+GKDKY CGSNVFWKW
Sbjct: 117 IARAYTVQFGTCQVPYNFTGCQDLAKIKNVPFLSEDMKLECEGKDKY-CGSNVFWKW 172
>gi|302784440|ref|XP_002973992.1| hypothetical protein SELMODRAFT_19706 [Selaginella
moellendorffii]
gi|302803500|ref|XP_002983503.1| hypothetical protein SELMODRAFT_19703 [Selaginella
moellendorffii]
gi|300148746|gb|EFJ15404.1| hypothetical protein SELMODRAFT_19703 [Selaginella
moellendorffii]
gi|300158324|gb|EFJ24947.1| hypothetical protein SELMODRAFT_19706 [Selaginella
moellendorffii]
Length = 82
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 45/57 (78%)
Query: 29 IAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 85
+A V+F TC+ NFT QDLAK++ V F+SDDL+LEC+GKDKYKCGSNVFWKW
Sbjct: 26 LARAYTVEFNTCRFPYNFTGCQDLAKKQDVKFLSDDLKLECEGKDKYKCGSNVFWKW 82
>gi|372477812|gb|AEX97100.1| photosystem I reaction center subunit, partial [Malus x domestica]
Length = 112
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 13 ETAGEKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGK 72
E +K LA G + A V+FGTCK ENFT QDLAKQKKVPF SDDLELEC+GK
Sbjct: 53 ELNDKKRLATSGAN--FARAYTVEFGTCKFPENFTGCQDLAKQKKVPFTSDDLELECEGK 110
Query: 73 DK 74
DK
Sbjct: 111 DK 112
>gi|125578737|gb|EAZ19883.1| hypothetical protein OsJ_35469 [Oryza sativa Japonica Group]
Length = 107
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/30 (90%), Positives = 30/30 (100%)
Query: 56 KKVPFISDDLELECKGKDKYKCGSNVFWKW 85
KKVPFISDDLE+EC+GK+KYKCGSNVFWKW
Sbjct: 78 KKVPFISDDLEIECEGKEKYKCGSNVFWKW 107
>gi|302844261|ref|XP_002953671.1| photosystem I reaction center subunit N, chloroplast precursor
[Volvox carteri f. nagariensis]
gi|11134150|sp|Q9SBN5.1|PSAN_VOLCA RecName: Full=Photosystem I reaction center subunit N,
chloroplastic; Short=PSI-N; Flags: Precursor
gi|5902586|gb|AAD55563.1|AF110781_1 photosystem I reaction center subunit PSAN precursor [Volvox
carteri f. nagariensis]
gi|300261080|gb|EFJ45295.1| photosystem I reaction center subunit N, chloroplast precursor
[Volvox carteri f. nagariensis]
Length = 139
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 29 IAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGS 79
+A + V GTC+ ENF ++LA K V +I++DL++EC+GKD CGS
Sbjct: 82 LARSRTVYDGTCQFPENFFGCEELAFNKGVKYIAEDLKIECEGKDAKSCGS 132
>gi|219877910|gb|ACL50605.1| chloroplast photosystem I subunit N [Agrostis canina]
Length = 23
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/23 (82%), Positives = 23/23 (100%)
Query: 63 DDLELECKGKDKYKCGSNVFWKW 85
DDLE+EC+GK+K+KCGSNVFWKW
Sbjct: 1 DDLEIECEGKEKFKCGSNVFWKW 23
>gi|74272701|gb|ABA01146.1| chloroplast photosystem I subunit N [Chlamydomonas incerta]
Length = 139
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 29 IAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGS 79
+A + V GTC ENF ++LA K V FI++D+++EC+GK +CGS
Sbjct: 82 LARSRTVYDGTCTFPENFFGCEELAFNKGVKFIAEDIKIECEGKTAKECGS 132
>gi|12744797|gb|AAK06774.1|AF323725_1 PsaN precursor [Chlamydomonas reinhardtii]
Length = 139
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 29 IAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGS 79
+A + V GTC ENF ++LA K V FI++D+++EC+GK +CGS
Sbjct: 82 LARSRTVYDGTCTFPENFFGCEELAFNKGVKFIAEDIKIECEGKTAKECGS 132
>gi|159487379|ref|XP_001701700.1| photosystem I reaction center subunit N [Chlamydomonas reinhardtii]
gi|158280919|gb|EDP06675.1| photosystem I reaction center subunit N [Chlamydomonas reinhardtii]
Length = 139
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 29 IAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGS 79
+A + V GTC ENF ++LA K V FI++D+++EC+GK +CGS
Sbjct: 82 LARSRTVYDGTCTFPENFFGCEELAFNKGVKFIAEDIKIECEGKTAKECGS 132
>gi|348027050|ref|YP_004766855.1| hypothetical protein MELS_1809 [Megasphaera elsdenii DSM 20460]
gi|341823104|emb|CCC74028.1| putative uncharacterized protein [Megasphaera elsdenii DSM 20460]
Length = 514
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 14 TAGEKGLAACGKSKRIAVKQNVQFGTCKLLENFTDSQ 50
T+G GL C KS R+ +QN+ G+ ++LENFT+ Q
Sbjct: 148 TSGGVGLT-CWKSDRLLFQQNIHIGSLRILENFTEKQ 183
>gi|307104372|gb|EFN52626.1| hypothetical protein CHLNCDRAFT_32470 [Chlorella variabilis]
Length = 145
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 29 IAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKGKDKYKCGSNV 81
A + V GTCK N+ A V F++DD++LEC GK+ KC SN+
Sbjct: 86 FARSRTVSDGTCKFPGNWFGCDIGAVAGDVKFVADDIKLECTGKEAGKCASNM 138
>gi|186532722|ref|NP_001032133.2| photosystem I reaction center subunit N [Arabidopsis thaliana]
gi|332010450|gb|AED97833.1| photosystem I reaction center subunit N [Arabidopsis thaliana]
Length = 181
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/22 (77%), Positives = 18/22 (81%)
Query: 35 VQFGTCKLLENFTDSQDLAKQK 56
VQFG+CK ENFT QDLAKQK
Sbjct: 121 VQFGSCKFPENFTGCQDLAKQK 142
>gi|70733259|ref|YP_263032.1| ABC transporter ATP-binding protein/permease [Pseudomonas protegens
Pf-5]
gi|68347558|gb|AAY95164.1| putative ABC transporter, ATP binding/permease protein [Pseudomonas
protegens Pf-5]
Length = 908
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 11 RNETAGEKGLAACGKSKRIAVKQNV---QFGTCKLLENFTDSQDLAKQKKVPFISDDLEL 67
R E G G CGK+ + V + G+ KLL N D++DLA +K+V F+S L
Sbjct: 293 RGEIFGFLGSNGCGKTTTMKVLTGLMPASEGSAKLLGNPVDAKDLATRKRVGFMSQSFSL 352
>gi|412992925|emb|CCO16458.1| unknown [Bathycoccus prasinos]
Length = 100
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 22 ACGKSKRIAVKQNVQFGTCKLLENFTDSQDLAKQKKVPFISDDLELECKG 71
A S A + V G+CK +N ++ A+ V F+SDD++LEC+G
Sbjct: 27 AMTSSANFARSRTVTDGSCKFPDNLLGCENAAEFGNVKFLSDDIKLECEG 76
>gi|399007709|ref|ZP_10710211.1| ABC-type multidrug transport system, ATPase component [Pseudomonas
sp. GM17]
gi|398119481|gb|EJM09170.1| ABC-type multidrug transport system, ATPase component [Pseudomonas
sp. GM17]
Length = 906
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 11 RNETAGEKGLAACGKSKRIAVKQNVQ---FGTCKLLENFTDSQDLAKQKKVPFISDDLEL 67
R E G G CGK+ + V + G+ +LL N D++DLA +K+V F+S L
Sbjct: 293 RGEIFGFLGSNGCGKTTTMKVLTGLMPATEGSARLLGNPVDARDLATRKRVGFMSQSFSL 352
>gi|425902239|ref|ZP_18878830.1| putative ABC transporter, ATP binding/permease protein [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397884473|gb|EJL00957.1| putative ABC transporter, ATP binding/permease protein [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
Length = 906
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 11 RNETAGEKGLAACGKSKRIAVKQNVQ---FGTCKLLENFTDSQDLAKQKKVPFISDDLEL 67
R E G G CGK+ + V + G+ +LL N D++DLA +K+V F+S L
Sbjct: 293 RGEIFGFLGSNGCGKTTTMKVLTGLMPATEGSARLLGNPVDARDLATRKRVGFMSQSFSL 352
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.136 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,465,601,001
Number of Sequences: 23463169
Number of extensions: 49506621
Number of successful extensions: 65634
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 65588
Number of HSP's gapped (non-prelim): 48
length of query: 85
length of database: 8,064,228,071
effective HSP length: 55
effective length of query: 30
effective length of database: 6,773,753,776
effective search space: 203212613280
effective search space used: 203212613280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)